Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr06

Orthogroup ID

OG0003118

Physical Location & Seq

Genomic Coordinates Forward (+)

27690289 .. 27692640

Gene Structure 2352 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD06G1133000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1092 bp

ATGGCAGATCCACTCAGCAACTCTCGTCGCCACTCTCTCGTCCCAAGCTTCTTGTACTCTTCATCTTCTTCAATGACGACGAGTACTGATGCACTGGGGCCGTCGGTTTCATCGTCGTTGGTGGGGGCAGCGTTATTGTCGAAAAGAGTGGTGGTTCCGGCGCCTAAAGAGAAGGTGGAGATGTACTCGGCGGGGTTTTACGCCGCGTGTGGCGTAGGAGGGATGTTGAGCACCGGACTCACCCACTTGGCCGTCACCCCGATCGATCTCGTCAAGTGTAATATGCAGATTGACCCAATCAAGTACAAGAGCATCATATCCGGATTCGGAGTTCTGCTCAAGGAGCAGGGCATTAGGGGTTTGTTCAAAGGTTGGGCACCAACCTGGGCTGGTTACAGTGTTCAGGGAGCCGGCAAGTTCGGACTCTACGAGTTCTTCAAGAAGTACTACAGCGATGTTGCCGGCCCTGAGTACGCAGCCAAGTACAAAACATTGATCTACCTTGCAGGTTCTGCATCAGCTGAAGTCATTGCCGATGTCGCCCTCTGTCCTATGGAAGCCGTCAAAGTTCGTGTCCAAACTCAGCCTGGTTTTGCCAGAGGCTTGACTGATGGCCTTCCGAAGTTCATCAAATCCGAAGGCGCTCTTGGGTTGTACAAAGGGATGGTTCCGCTTTGGGGACGTCAAGTTCCTTATACTATGATGAAATTCGCGTCTTTCGAGACGATTATCGAGCTGATGTACAAGCATGCCGTCCCAACACCTAAAGAGCAATGCAGCAAACCCTTGCAGCTGGGTGTGAGCTTTGCTAGCGGGTATATTGCTGGTGTATTCTGTGCTGTTGTCTCGCACCCGGCTGACAACTTGGTCTCCTTCCTCAACAATGCCAAGGGAGCAACCTTTGGTGAAGCTGTGAAGCAACTGGGAGTTTTAGGTCTTTTCACCCGAGGCCTTCCTCTGCGTATCGTCATGATCGGAACCCTCACCGGAGGCCAATGGGTTATCTATGATGCTTTCAAAGTTTTTGTTGGGCTGCCGACTACTGGTGGTCCTGCTCCCGCTGCTGCCGCCATCGAGGTTGCGAAGTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0006810 GO:0006811 GO:0006817 GO:0006820 GO:0006839 GO:0006950 GO:0006970 GO:0008150 GO:0008509 GO:0009628 GO:0009651 GO:0015075 GO:0015103 GO:0015114 GO:0015318 GO:0015698 GO:0016020 GO:0016021 GO:0019866 GO:0022857 GO:0031090 GO:0031224 GO:0031966 GO:0031967 GO:0031975 GO:0034220 GO:0035435 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0098656 GO:0098660 GO:0098661

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Mito_carr

Protein Analysis

364

Amino Acids

38.5

Weight (kDa)

9.35

Isoelectric Point (pI)

29.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Mito_carr	PF00153	68 - 152	1.9e-21	Mitochondrial carrier protein
Mito_carr	PF00153	163 - 250	1.7e-18	Mitochondrial carrier protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003118)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G48850
fragaria_vesca	FvH4_5g09180
malus_domestica	MD06G1133000.v1.1 MD14G1149100.v1.1 MD14G1149200.v1.1
prunus_persica	Prupe.5G143800_v2.0.a1 Prupe.5G143800_v2.0.a1 Prupe.5G144200_v2.0.a1
pyrus_communis	pycom06g12440 pycom14g12400
rosa_chinensis	RchiOBHm_Chr3g0469101 RchiOBHm_Chr7g0189001
rosa_laevigata	RLG00000004644 RLG00000024373 RLG00000024376 RLG00000024384 RLG00000024387
rosa_multiflora	Rmu_sc0000302.1_g000019 Rmu_sc0000302.1_g000040 Rmu_sc0007139.1_g000006 Rmu_sc0007933.1_g000010 Rmu_sc0008582.1_g000005
rosa_roxburghii	Rroxscaffold_3G00265880 Rroxscaffold_6G00412220
rosa_rugosa	Rorug03G0099100 Rorug03G0099100 Rorug03G0099500 Rorug03G0099600 Rorug06G0495300
rosa_samantha	Rh3DG203500 Rh7AG100000 Rh7BG102200 Rh7CG103500 Rh7DG102000
rosa_wichuraiana	Rw3G014010 Rw3G014030 Rw7G008630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	866
AatII	GACGTC	1 cut(s)	685
Acc36I	ACCTGC	1 cut(s)	497
AccB1I	GGYRCC	2 cut(s)	160, 376
AccII	CGCG	2 cut(s)	206, 713
AccIII	TCCGGA	1 cut(s)	320
AciI	CCGC	6 cut(s)	191, 204, 671, 813, 1059, 1068
AclWI	GGATC	1 cut(s)	2
AcoI	YGGCCR	1 cut(s)	249
AcsI	RAATTY	1 cut(s)	707
AcuI	CTGAAG	1 cut(s)	543
AcyI	GRCGYC	2 cut(s)	161, 682
AfaI	GTAC	9 cut(s)	56, 85, 185, 305, 446, 473, 485, 656, 743
AfiI	CCNNNNNNNGG	2 cut(s)	677, 1043
AgsI	TTSAA	4 cut(s)	72, 367, 439, 1018
AjnI	CCWGG	2 cut(s)	383, 586
AjuI	GAANNNNNNNTTGG	2 cut(s)	630, 662
AloI	GAACNNNNNNTCC	4 cut(s)	315, 347, 672, 704
AluBI	AGCT	6 cut(s)	48, 521, 736, 793, 804, 911
AluI	AGCT	6 cut(s)	48, 521, 736, 793, 804, 911
Alw21I	GWGCWC	1 cut(s)	233
Alw26I	GTCTC	3 cut(s)	716, 850, 874
AlwI	GGATC	1 cut(s)	2
AlwNI	CAGNNNCTG	1 cut(s)	512
Ama87I	CYCGRG	1 cut(s)	945
Aor13HI	TCCGGA	1 cut(s)	320
AoxI	GGCC	6 cut(s)	98, 249, 463, 613, 949, 991
ApeKI	GCWGC	7 cut(s)	128, 476, 777, 790, 1033, 1061, 1064
ApoI	RAATTY	1 cut(s)	707
ArsI	GACNNNNNNTTYG	2 cut(s)	558, 590
AspLEI	GCGC	2 cut(s)	163, 644
AspS9I	GGNCC	3 cut(s)	98, 464, 1049
AsuC2I	CCSGG	1 cut(s)	854
AsuHPI	GGTGA	5 cut(s)	232, 247, 917, 934, 976
AsuNHI	GCTAGC	1 cut(s)	809
AvaI	CYCGRG	1 cut(s)	945
AvaII	GGWCC	1 cut(s)	1049
BaeGI	GKGCMC	1 cut(s)	379
BanI	GGYRCC	2 cut(s)	160, 376
Bbv12I	GWGCWC	1 cut(s)	233
BbvI	GCAGC	7 cut(s)	140, 488, 789, 802, 1020, 1048, 1051
BccI	CCATC	3 cut(s)	605, 658, 1079
BceAI	ACGGC	4 cut(s)	85, 236, 545, 737
BciT130I	CCWGG	2 cut(s)	385, 588
BcnI	CCSGG	1 cut(s)	854
BcoDI	GTCTC	3 cut(s)	716, 850, 874
BfaI	CTAG	1 cut(s)	810
BfmI	CTRYAG	1 cut(s)	448
BfoI	RGCGCY	2 cut(s)	164, 645
BfuAI	ACCTGC	1 cut(s)	497
BisI	GCNGC	9 cut(s)	129, 204, 477, 778, 791, 1034, 1062, 1065, 1068
BlsI	GCNGC	9 cut(s)	130, 205, 478, 779, 792, 1035, 1063, 1066, 1069
BmcAI	AGTACT	2 cut(s)	85, 446
Bme1390I	CCNGG	3 cut(s)	385, 588, 854
Bme18I	GGWCC	1 cut(s)	1049
BmeT110I	CYCGRG	1 cut(s)	945
BmgT120I	GGNCC	3 cut(s)	98, 464, 1049
BmiI	GGNNCC	7 cut(s)	99, 156, 162, 378, 409, 669, 979
BmrFI	CCNGG	3 cut(s)	385, 588, 854
BmrI	ACTGGG	2 cut(s)	104, 932
BmsI	GCATC	4 cut(s)	79, 321, 524, 1000
BmtI	GCTAGC	1 cut(s)	813
BmuI	ACTGGG	2 cut(s)	104, 932
BplI	GAGNNNNNCTC	4 cut(s)	170, 202, 321, 353
BpuEI	CTTGAG	1 cut(s)	323
BpuMI	CCSGG	1 cut(s)	854
Bsa29I	ATCGAT	1 cut(s)	264
BsaHI	GRCGYC	2 cut(s)	161, 682
BsaI	GGTCTC	1 cut(s)	874
BsaJI	CCNNGG	3 cut(s)	384, 888, 946
BsaWI	WCCGGW	3 cut(s)	233, 320, 986
BsaXI	ACNNNNNCTCC	2 cut(s)	854, 884
Bsc4I	CCNNNNNNNGG	2 cut(s)	677, 1043
Bse118I	RCCGGY	2 cut(s)	410, 461
Bse1I	ACTGG	3 cut(s)	99, 927, 1048
Bse3DI	GCAATG	2 cut(s)	528, 779
BseAI	TCCGGA	1 cut(s)	320
BseBI	CCWGG	2 cut(s)	385, 588
BseCI	ATCGAT	1 cut(s)	264
BseDI	CCNNGG	3 cut(s)	384, 888, 946
BseGI	GGATG	2 cut(s)	228, 669
BseLI	CCNNNNNNNGG	2 cut(s)	677, 1043
BseMI	GCAATG	2 cut(s)	528, 779
BseMII	CTCAG	3 cut(s)	28, 459, 596
BseNI	ACTGG	3 cut(s)	99, 927, 1048
BseSI	GKGCMC	1 cut(s)	379
BseXI	GCAGC	7 cut(s)	140, 488, 789, 802, 1020, 1048, 1051
BseYI	CCCAGC	1 cut(s)	793
Bsh1236I	CGCG	2 cut(s)	206, 713
Bsh1285I	CGRYCG	1 cut(s)	264
BshFI	GGCC	6 cut(s)	100, 251, 465, 615, 951, 993
BshNI	GGYRCC	2 cut(s)	160, 376
BshVI	ATCGAT	1 cut(s)	264
BsiEI	CGRYCG	1 cut(s)	264
BsiHKAI	GWGCWC	1 cut(s)	233
BsiHKCI	CYCGRG	1 cut(s)	945
BsiSI	CCGG	7 cut(s)	158, 234, 321, 411, 462, 854, 987
BslFI	GGGAC	3 cut(s)	26, 693, 740
BslI	CCNNNNNNNGG	2 cut(s)	677, 1043
BsmAI	GTCTC	3 cut(s)	716, 850, 874
BsmBI	CGTCTC	1 cut(s)	716
BsmFI	GGGAC	3 cut(s)	26, 693, 740
BsnI	GGCC	6 cut(s)	100, 251, 465, 615, 951, 993
Bso31I	GGTCTC	1 cut(s)	874
BsoBI	CYCGRG	1 cut(s)	945
Bsp1286I	GDGCHC	2 cut(s)	233, 379
Bsp13I	TCCGGA	1 cut(s)	320
Bsp1407I	TGTACA	2 cut(s)	654, 741
Bsp143I	GATC	5 cut(s)	7, 261, 265, 495, 972
BspACI	CCGC	6 cut(s)	191, 204, 671, 813, 1059, 1068
BspANI	GGCC	6 cut(s)	100, 251, 465, 615, 951, 993
BspCNI	CTCAG	3 cut(s)	27, 460, 595
BspDI	ATCGAT	1 cut(s)	264
BspEI	TCCGGA	1 cut(s)	320
BspFNI	CGCG	2 cut(s)	206, 713
BspHI	TCATGA	1 cut(s)	969
BspLI	GGNNCC	7 cut(s)	99, 156, 162, 378, 409, 669, 979
BspMI	ACCTGC	1 cut(s)	497
BspOI	GCTAGC	1 cut(s)	813
BspPI	GGATC	1 cut(s)	2
BspT107I	GGYRCC	2 cut(s)	160, 376
BspTNI	GGTCTC	1 cut(s)	874
BsrDI	GCAATG	2 cut(s)	528, 779
BsrFI	RCCGGY	2 cut(s)	410, 461
BsrGI	TGTACA	2 cut(s)	654, 741
BsrI	ACTGG	3 cut(s)	99, 927, 1048
BssAI	RCCGGY	2 cut(s)	410, 461
BssECI	CCNNGG	3 cut(s)	384, 888, 946
BssMI	GATC	5 cut(s)	7, 261, 265, 495, 972
BssNI	GRCGYC	2 cut(s)	161, 682
BssT1I	CCWWGG	1 cut(s)	888
Bst2UI	CCWGG	2 cut(s)	385, 588
Bst4CI	ACNGT	1 cut(s)	398
Bst6I	CTCTTC	1 cut(s)	64
BstACI	GRCGYC	2 cut(s)	161, 682
BstAPI	GCANNNNNTGC	1 cut(s)	512
BstAUI	TGTACA	2 cut(s)	654, 741
BstC8I	GCNNGC	4 cut(s)	412, 463, 750, 811
BstDEI	CTNAG	3 cut(s)	14, 468, 582
BstF5I	GGATG	2 cut(s)	228, 669
BstFNI	CGCG	2 cut(s)	206, 713
BstH2I	RGCGCY	2 cut(s)	164, 645
BstHHI	GCGC	2 cut(s)	163, 644
BstKTI	GATC	5 cut(s)	10, 264, 268, 498, 975
BstMAI	GTCTC	3 cut(s)	716, 850, 874
BstMBI	GATC	5 cut(s)	7, 261, 265, 495, 972
BstMCI	CGRYCG	1 cut(s)	264
BstMWI	GCNNNNNNNGC	7 cut(s)	343, 512, 539, 810, 893, 1061, 1067
BstNI	CCWGG	2 cut(s)	385, 588
BstNSI	RCATGY	1 cut(s)	752
BstSCI	CCNGG	3 cut(s)	383, 586, 852
BstSFI	CTRYAG	1 cut(s)	448
BstSLI	GKGCMC	1 cut(s)	379
BstUI	CGCG	2 cut(s)	206, 713
BstV1I	GCAGC	7 cut(s)	140, 488, 789, 802, 1020, 1048, 1051
BstX2I	RGATCY	1 cut(s)	7
BstYI	RGATCY	1 cut(s)	7
Bsu15I	ATCGAT	1 cut(s)	264
BsuRI	GGCC	6 cut(s)	100, 251, 465, 615, 951, 993
BsuTUI	ATCGAT	1 cut(s)	264
BtgZI	GCGATG	1 cut(s)	468
BtsCI	GGATG	2 cut(s)	228, 669
BtsIMutI	CAGTG	2 cut(s)	92, 403
BveI	ACCTGC	1 cut(s)	497
Cac8I	GCNNGC	4 cut(s)	412, 463, 750, 811
CaiI	CAGNNNCTG	1 cut(s)	512
CciI	TCATGA	1 cut(s)	969
CfoI	GCGC	2 cut(s)	163, 644
Cfr10I	RCCGGY	2 cut(s)	410, 461
Cfr13I	GGNCC	3 cut(s)	98, 464, 1049
ClaI	ATCGAT	1 cut(s)	264
CseI	GACGC	1 cut(s)	702
Csp6I	GTAC	9 cut(s)	55, 84, 184, 304, 445, 472, 484, 655, 742
CviAII	CATG	2 cut(s)	749, 970
CviQI	GTAC	9 cut(s)	55, 84, 184, 304, 445, 472, 484, 655, 742
DdeI	CTNAG	3 cut(s)	14, 468, 582
DinI	GGCGCC	1 cut(s)	162
DpnI	GATC	5 cut(s)	9, 263, 267, 497, 974
DpnII	GATC	5 cut(s)	7, 261, 265, 495, 972
DrdI	GACNNNNNNGTC	1 cut(s)	866
DseDI	GACNNNNNNGTC	1 cut(s)	866
EaeI	YGGCCR	1 cut(s)	249
Eam1104I	CTCTTC	1 cut(s)	64
EarI	CTCTTC	1 cut(s)	64
Eco130I	CCWWGG	1 cut(s)	888
Eco147I	AGGCCT	1 cut(s)	951
Eco31I	GGTCTC	1 cut(s)	874
Eco47I	GGWCC	1 cut(s)	1049
Eco57I	CTGAAG	1 cut(s)	543
Eco88I	CYCGRG	1 cut(s)	945
EcoRII	CCWGG	2 cut(s)	383, 586
EcoT14I	CCWWGG	1 cut(s)	888
EgeI	GGCGCC	1 cut(s)	162
EheI	GGCGCC	1 cut(s)	162
ErhI	CCWWGG	1 cut(s)	888
Esp3I	CGTCTC	1 cut(s)	716
FaeI	CATG	2 cut(s)	752, 973
FaiI	YATR	9 cut(s)	284, 317, 554, 696, 701, 750, 819, 971, 1008
FalI	AAGNNNNNCTT	2 cut(s)	630, 662
FaqI	GGGAC	3 cut(s)	26, 693, 740
FatI	CATG	2 cut(s)	748, 969
FauI	CCCGC	3 cut(s)	184, 806, 1066
Fnu4HI	GCNGC	9 cut(s)	129, 204, 477, 778, 791, 1034, 1062, 1065, 1068
FokI	GGATG	2 cut(s)	235, 676
Fsp4HI	GCNGC	9 cut(s)	129, 204, 477, 778, 791, 1034, 1062, 1065, 1068
FspBI	CTAG	1 cut(s)	810
GlaI	GCGC	2 cut(s)	162, 643
GluI	GCNGC	9 cut(s)	129, 204, 477, 778, 791, 1034, 1062, 1065, 1068
GsaI	CCCAGC	1 cut(s)	797
HaeII	RGCGCY	2 cut(s)	164, 645
HaeIII	GGCC	6 cut(s)	100, 251, 465, 615, 951, 993
HapII	CCGG	7 cut(s)	158, 234, 321, 411, 462, 854, 987
HgaI	GACGC	1 cut(s)	702
HhaI	GCGC	2 cut(s)	163, 644
Hin1I	GRCGYC	2 cut(s)	161, 682
Hin1II	CATG	2 cut(s)	752, 973
Hin6I	GCGC	2 cut(s)	161, 642
HinP1I	GCGC	2 cut(s)	161, 642
HindIII	AAGCTT	1 cut(s)	46
HinfI	GANTC	3 cut(s)	237, 324, 423
HpaII	CCGG	7 cut(s)	158, 234, 321, 411, 462, 854, 987
HphI	GGTGA	5 cut(s)	232, 247, 917, 934, 976
Hpy188I	TCNGA	5 cut(s)	329, 422, 621, 637, 977
Hpy188III	TCNNGA	5 cut(s)	321, 439, 721, 970, 1089
Hpy99I	CGWCG	4 cut(s)	30, 82, 106, 118
HpyAV	CCTTC	5 cut(s)	166, 626, 632, 883, 962
HpyCH4III	ACNGT	1 cut(s)	398
HpyCH4IV	ACGT	1 cut(s)	682
HpyCH4V	TGCA	6 cut(s)	92, 286, 506, 515, 777, 790
HpyF10VI	GCNNNNNNNGC	7 cut(s)	343, 512, 539, 810, 893, 1061, 1067
HpyF3I	CTNAG	3 cut(s)	14, 468, 582
HpySE526I	ACGT	1 cut(s)	682
Hsp92I	GRCGYC	2 cut(s)	161, 682
Hsp92II	CATG	2 cut(s)	752, 973
HspAI	GCGC	2 cut(s)	161, 642
KasI	GGCGCC	1 cut(s)	160
Kpn2I	TCCGGA	1 cut(s)	320
KroI	GCCGGC	2 cut(s)	410, 461
KroNI	GCCGGC	2 cut(s)	412, 463
Kzo9I	GATC	5 cut(s)	7, 261, 265, 495, 972
LmnI	GCTCC	4 cut(s)	343, 407, 893, 1060
Lsp1109I	GCAGC	7 cut(s)	140, 488, 789, 802, 1020, 1048, 1051
LweI	GCATC	4 cut(s)	79, 321, 524, 1000
MaeI	CTAG	1 cut(s)	810
MaeII	ACGT	1 cut(s)	682
MaeIII	GTNAC	2 cut(s)	253, 392
MalI	GATC	5 cut(s)	9, 263, 267, 497, 974
MboI	GATC	5 cut(s)	7, 261, 265, 495, 972
MboII	GAAGA	4 cut(s)	51, 57, 60, 427
MflI	RGATCY	1 cut(s)	7
MhlI	GDGCHC	2 cut(s)	233, 379
MluCI	AATT	1 cut(s)	707
Mly113I	GGCGCC	1 cut(s)	161
MlyI	GAGTC	2 cut(s)	231, 417
MnlI	CCTC	9 cut(s)	212, 554, 593, 887, 941, 966, 983, 992, 1069
MroI	TCCGGA	1 cut(s)	320
MroNI	GCCGGC	2 cut(s)	410, 461
MspA1I	CMGCKG	3 cut(s)	521, 793, 1061
MspI	CCGG	7 cut(s)	158, 234, 321, 411, 462, 854, 987
MspR9I	CCNGG	3 cut(s)	385, 588, 854
MvaI	CCWGG	2 cut(s)	385, 588
MvnI	CGCG	2 cut(s)	206, 713
MwoI	GCNNNNNNNGC	7 cut(s)	343, 512, 539, 810, 893, 1061, 1067
NaeI	GCCGGC	2 cut(s)	412, 463
NarI	GGCGCC	1 cut(s)	161
NciI	CCSGG	1 cut(s)	854
NdeII	GATC	5 cut(s)	7, 261, 265, 495, 972
NgoMIV	GCCGGC	2 cut(s)	410, 461
NheI	GCTAGC	1 cut(s)	809
NlaIII	CATG	2 cut(s)	752, 973
NlaIV	GGNNCC	7 cut(s)	99, 156, 162, 378, 409, 669, 979
NmeAIII	GCCGAG	1 cut(s)	167
NmuCI	GTSAC	1 cut(s)	253
NspI	RCATGY	1 cut(s)	752
PaeI	GCATGC	1 cut(s)	752
PagI	TCATGA	1 cut(s)	969
PceI	AGGCCT	1 cut(s)	951
PcsI	WCGNNNNNNNCGW	3 cut(s)	110, 426, 717
PdiI	GCCGGC	2 cut(s)	412, 463
PfeI	GAWTC	1 cut(s)	324
PkrI	GCNGC	9 cut(s)	130, 205, 478, 779, 792, 1035, 1063, 1066, 1069
Ple19I	CGATCG	1 cut(s)	264
PleI	GAGTC	2 cut(s)	231, 417
PluTI	GGCGCC	1 cut(s)	164
PpsI	GAGTC	2 cut(s)	231, 417
Psp6I	CCWGG	2 cut(s)	383, 586
PspFI	CCCAGC	1 cut(s)	793
PspGI	CCWGG	2 cut(s)	383, 586
PspN4I	GGNNCC	7 cut(s)	99, 156, 162, 378, 409, 669, 979
PspPI	GGNCC	3 cut(s)	98, 464, 1049
PstNI	CAGNNNCTG	1 cut(s)	512
PsuI	RGATCY	1 cut(s)	7
PvuI	CGATCG	1 cut(s)	264
PvuII	CAGCTG	2 cut(s)	521, 793
RsaI	GTAC	9 cut(s)	56, 85, 185, 305, 446, 473, 485, 656, 743
RsaNI	GTAC	9 cut(s)	55, 84, 184, 304, 445, 472, 484, 655, 742
SatI	GCNGC	9 cut(s)	129, 204, 477, 778, 791, 1034, 1062, 1065, 1068
Sau3AI	GATC	5 cut(s)	7, 261, 265, 495, 972
Sau96I	GGNCC	3 cut(s)	98, 464, 1049
ScaI	AGTACT	2 cut(s)	85, 446
SchI	GAGTC	2 cut(s)	231, 417
ScrFI	CCNGG	3 cut(s)	385, 588, 854
SduI	GDGCHC	2 cut(s)	233, 379
SfaNI	GCATC	4 cut(s)	79, 321, 524, 1000
SfcI	CTRYAG	1 cut(s)	448
SfoI	GGCGCC	1 cut(s)	162
SinI	GGWCC	1 cut(s)	1049
SmlI	CTYRAG	1 cut(s)	338
SmoI	CTYRAG	1 cut(s)	338
SphI	GCATGC	1 cut(s)	752
Sse9I	AATT	1 cut(s)	707
SseBI	AGGCCT	1 cut(s)	951
SsiI	CCGC	6 cut(s)	191, 204, 671, 813, 1059, 1068
SspDI	GGCGCC	1 cut(s)	160
SspMI	CTAG	1 cut(s)	810
StuI	AGGCCT	1 cut(s)	951
StyD4I	CCNGG	3 cut(s)	383, 586, 852
StyI	CCWWGG	1 cut(s)	888
TaaI	ACNGT	1 cut(s)	398
TaiI	ACGT	1 cut(s)	685
TaqI	TCGA	5 cut(s)	140, 264, 720, 732, 1074
TasI	AATT	1 cut(s)	707
TatI	WGTACW	8 cut(s)	54, 83, 183, 303, 444, 483, 654, 741
TauI	GCSGC	2 cut(s)	206, 1070
TfiI	GAWTC	1 cut(s)	324
TscAI	CASTG	2 cut(s)	99, 403
TseFI	GTSAC	1 cut(s)	253
TseI	GCWGC	7 cut(s)	128, 476, 777, 790, 1033, 1061, 1064
Tsp45I	GTSAC	1 cut(s)	253
TspDTI	ATGAA	4 cut(s)	51, 99, 616, 719
TspRI	CASTG	2 cut(s)	99, 403
VpaK11BI	GGWCC	1 cut(s)	1049
XapI	RAATTY	1 cut(s)	707
XceI	RCATGY	1 cut(s)	752
XcmI	CCANNNNNNNNNTGG	1 cut(s)	584
XspI	CTAG	1 cut(s)	810
ZraI	GACGTC	1 cut(s)	683
ZrmI	AGTACT	2 cut(s)	85, 446

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.