AT3G63410
ERF Family

Belongs to the class I-like SAM-binding methyltransferase superfamily. MPBQ MBSQ MT family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Reverse (-)
23415589 .. 23417119
1531 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G63410.1

Sequence Viewer

Length: 1017 bp
ATGGCCTCTTTGATGCTCAACGGGGCCATTACCTTCCCCAAAGGTTTAGGTTCCCCTGGTTCCAATTTGCATGCCAGATCGATTCCTCGGCCGACCTTACTCTCAGTTACCCGAACCTCCACACCTAGACTCTCGGTGGCTACTAGATGCAGCAGCAGCAGCGTGTCGTCTTCCCGGCCATCGGCGCAACCTAGGTTCATTCAGCACAAGAAGGAGGCTTACTGGTTCTACAGGTTCTTATCCATCGTATACGACCATGTCATCAATCCTGGGCATTGGACCGAGGATATGAGAGACGACGCTCTTGAGCCAGCGGATCTCAGCCATCCGGACATGCGAGTGGTCGATGTCGGCGGCGGAACTGGTTTCACTACTCTGGGCATAGTCAAGACAGTGAAGGCCAAGAATGTGACCATTCTGGACCAGTCGCCACATCAGCTGGCCAAAGCAAAGCAAAAGGAGCCGTTGAAAGAATGCAAGATCGTCGAGGGAGATGCTGAGGATCTTCCTTTTCCAACCGATTATGCTGACAGATACGTTTCTGCTGGAAGCATTGAGTACTGGCCGGACCCGCAGAGGGGAATAAGGGAAGCGTACAGGGTTCTCAAGATCGGTGGCAAAGCGTGTCTCATCGGCCCTGTCTACCCAACCTTCTGGCTCTCTCGCTTCTTTTCTGATGTCTGGATGCTCTTCCCCAAGGAGGAAGAGTACATTGAGTGGTTCAAGAATGCCGGTTTCAAGGACGTTCAGCTCAAGAGGATTGGCCCCAAGTGGTACCGTGGTGTTCGCAGGCACGGCCTTATCATGGGATGTTCTGTCACTGGTGTTAAACCTGCCTCCGGTGACTCTCCTCTCCAGCTTGGTCCAAAGGAAGAGGACGTAGAGAAGCCTGTCAACAACCCCTTCTCCTTCTTGGGACGCTTCCTCCTGGGAACTCTAGCAGCTGCCTGGTTTGTGTTAATCCCTATCTACATGTGGATCAAGGATCAGATCGTTCCCAAAGACCAACCCATCTGA

Protein Analysis

338

Amino Acids

37.93

Weight (kDa)

9.19

Isoelectric Point (pI)

40.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Methyltransf_23 PF13489 107 - 250 3.6e-06 Methyltransferase domain
Methyltransf_31 PF13847 109 - 211 6.1e-13 Methyltransferase domain
Ubie_methyltran PF01209 110 - 211 2.9e-12 ubiE/COQ5 methyltransferase family
Methyltransf_25 PF13649 114 - 206 3.2e-17 Methyltransferase domain
Methyltransf_11 PF08241 115 - 209 7.8e-20 Methyltransferase domain
Methyltransf_12 PF08242 115 - 207 2.1e-10 Methyltransferase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 841
Acc65I GGTACC 1 cut(s) 774
AccB1I GGYRCC 1 cut(s) 774
AccI GTMKAC 2 cut(s) 249, 642
AccIII TCCGGA 1 cut(s) 328
AciI CCGC 4 cut(s) 314, 354, 357, 572
AclWI GGATC 4 cut(s) 324, 510, 986, 993
AcoI YGGCCR 4 cut(s) 89, 176, 441, 563
AfaI GTAC 4 cut(s) 560, 596, 710, 776
AfiI CCNNNNNNNGG 6 cut(s) 181, 577, 578, 700, 805, 839
AflIII ACRYGT 1 cut(s) 972
AgsI TTSAA 3 cut(s) 469, 724, 739
AjnI CCWGG 4 cut(s) 55, 268, 927, 947
AluBI AGCT 4 cut(s) 439, 751, 859, 944
AluI AGCT 4 cut(s) 439, 751, 859, 944
Alw26I GTCTC 2 cut(s) 288, 632
AlwI GGATC 4 cut(s) 324, 510, 986, 993
Aor13HI TCCGGA 1 cut(s) 328
ApeKI GCWGC 6 cut(s) 150, 153, 156, 159, 941, 944
Asp718I GGTACC 1 cut(s) 774
AspA2I CCTAGG 1 cut(s) 191
AspLEI GCGC 1 cut(s) 187
AspS9I GGNCC 7 cut(s) 24, 279, 421, 568, 635, 764, 863
AsuC2I CCSGG 1 cut(s) 175
AsuHPI GGTGA 1 cut(s) 854
AvaII GGWCC 4 cut(s) 279, 421, 568, 863
AvrII CCTAGG 1 cut(s) 191
BaeI ACNNNNGTAYC 2 cut(s) 766, 799
BalI TGGCCA 1 cut(s) 443
BanI GGYRCC 1 cut(s) 774
BarI GAAGNNNNNNTAC 2 cut(s) 203, 235
BbsI GAAGAC 1 cut(s) 162
BbvCI CCTCAGC 1 cut(s) 498
BbvI GCAGC 6 cut(s) 162, 165, 168, 171, 931, 953
BccI CCATC 3 cut(s) 187, 251, 333
BceAI ACGGC 2 cut(s) 448, 811
BcgI CGANNNNNNTGC 4 cut(s) 466, 476, 500, 510
BciT130I CCWGG 4 cut(s) 57, 270, 929, 949
BcnI CCSGG 1 cut(s) 175
BcoDI GTCTC 2 cut(s) 288, 632
BfaI CTAG 4 cut(s) 126, 144, 192, 938
BfmI CTRYAG 1 cut(s) 229
BfuAI ACCTGC 1 cut(s) 841
BisI GCNGC 7 cut(s) 151, 154, 157, 160, 355, 942, 945
BlnI CCTAGG 1 cut(s) 191
BlsI GCNGC 7 cut(s) 152, 155, 158, 161, 356, 943, 946
BmcAI AGTACT 1 cut(s) 560
Bme1390I CCNGG 5 cut(s) 57, 175, 270, 929, 949
Bme18I GGWCC 4 cut(s) 279, 421, 568, 863
BmgT120I GGNCC 7 cut(s) 24, 279, 421, 568, 635, 764, 863
BmiI GGNNCC 7 cut(s) 25, 52, 61, 462, 570, 766, 776
BmrFI CCNGG 5 cut(s) 57, 175, 270, 929, 949
BmsI GCATC 4 cut(s) 3, 137, 484, 675
BpiI GAAGAC 1 cut(s) 162
BpmI CTGGAG 1 cut(s) 839
Bpu10I CCTNAGC 1 cut(s) 498
BpuEI CTTGAG 3 cut(s) 326, 590, 737
BpuMI CCSGG 1 cut(s) 175
Bsa29I ATCGAT 1 cut(s) 80
BsaJI CCNNGG 8 cut(s) 55, 86, 191, 269, 282, 696, 778, 928
BsaWI WCCGGW 2 cut(s) 328, 839
BsaXI ACNNNNNCTCC 6 cut(s) 692, 722, 890, 909, 920, 939
Bsc4I CCNNNNNNNGG 6 cut(s) 181, 577, 578, 700, 805, 839
Bse118I RCCGGY 1 cut(s) 731
Bse1I ACTGG 5 cut(s) 227, 367, 424, 566, 826
BseAI TCCGGA 1 cut(s) 328
BseBI CCWGG 4 cut(s) 57, 270, 929, 949
BseCI ATCGAT 1 cut(s) 80
BseDI CCNNGG 8 cut(s) 55, 86, 191, 269, 282, 696, 778, 928
BseGI GGATG 3 cut(s) 325, 690, 815
BseLI CCNNNNNNNGG 6 cut(s) 181, 577, 578, 700, 805, 839
BseMII CTCAG 3 cut(s) 117, 334, 489
BseNI ACTGG 5 cut(s) 227, 367, 424, 566, 826
BseRI GAGGAG 1 cut(s) 840
BseX3I CGGCCG 1 cut(s) 89
BseXI GCAGC 6 cut(s) 162, 165, 168, 171, 931, 953
Bsh1285I CGRYCG 1 cut(s) 92
BshNI GGYRCC 1 cut(s) 774
BshVI ATCGAT 1 cut(s) 80
BsiEI CGRYCG 1 cut(s) 92
BsiSI CCGG 5 cut(s) 175, 329, 566, 732, 840
BslFI GGGAC 1 cut(s) 930
BslI CCNNNNNNNGG 6 cut(s) 181, 577, 578, 700, 805, 839
BsmAI GTCTC 2 cut(s) 288, 632
BsmBI CGTCTC 1 cut(s) 288
BsmFI GGGAC 1 cut(s) 930
BsmI GAATGC 2 cut(s) 479, 733
Bsp13I TCCGGA 1 cut(s) 328
Bsp143I GATC 8 cut(s) 77, 316, 480, 502, 609, 978, 985, 990
BspACI CCGC 4 cut(s) 314, 354, 357, 572
BspCNI CTCAG 3 cut(s) 116, 333, 490
BspDI ATCGAT 1 cut(s) 80
BspEI TCCGGA 1 cut(s) 328
BspLI GGNNCC 7 cut(s) 25, 52, 61, 462, 570, 766, 776
BspMI ACCTGC 1 cut(s) 841
BspPI GGATC 4 cut(s) 324, 510, 986, 993
BspQI GCTCTTC 1 cut(s) 695
BspT107I GGYRCC 1 cut(s) 774
BsrFI RCCGGY 1 cut(s) 731
BsrI ACTGG 5 cut(s) 227, 367, 424, 566, 826
BssAI RCCGGY 1 cut(s) 731
BssECI CCNNGG 8 cut(s) 55, 86, 191, 269, 282, 696, 778, 928
BssMI GATC 8 cut(s) 77, 316, 480, 502, 609, 978, 985, 990
BssNAI GTATAC 1 cut(s) 250
BssT1I CCWWGG 2 cut(s) 191, 696
Bst1107I GTATAC 1 cut(s) 250
Bst2UI CCWGG 4 cut(s) 57, 270, 929, 949
Bst4CI ACNGT 2 cut(s) 394, 779
Bst6I CTCTTC 3 cut(s) 695, 699, 867
BstC8I GCNNGC 4 cut(s) 72, 312, 441, 791
BstDEI CTNAG 3 cut(s) 103, 320, 498
BstDSI CCRYGG 1 cut(s) 778
BstF5I GGATG 3 cut(s) 325, 690, 815
BstHHI GCGC 1 cut(s) 187
BstKTI GATC 8 cut(s) 80, 319, 483, 505, 612, 981, 988, 993
BstMAI GTCTC 2 cut(s) 288, 632
BstMBI GATC 8 cut(s) 77, 316, 480, 502, 609, 978, 985, 990
BstMCI CGRYCG 1 cut(s) 92
BstMWI GCNNNNNNNGC 7 cut(s) 156, 159, 184, 436, 460, 571, 795
BstNI CCWGG 4 cut(s) 57, 270, 929, 949
BstNSI RCATGY 3 cut(s) 74, 337, 976
BstSCI CCNGG 5 cut(s) 55, 173, 268, 927, 947
BstSFI CTRYAG 1 cut(s) 229
BstV1I GCAGC 6 cut(s) 162, 165, 168, 171, 931, 953
BstV2I GAAGAC 1 cut(s) 162
BstX2I RGATCY 2 cut(s) 316, 502
BstXI CCANNNNNNTGG 1 cut(s) 654
BstYI RGATCY 2 cut(s) 316, 502
BstZ17I GTATAC 1 cut(s) 250
BstZI CGGCCG 1 cut(s) 89
Bsu15I ATCGAT 1 cut(s) 80
BsuTUI ATCGAT 1 cut(s) 80
BtgI CCRYGG 1 cut(s) 778
BtsCI GGATG 3 cut(s) 325, 690, 815
BtsIMutI CAGTG 2 cut(s) 399, 819
BveI ACCTGC 1 cut(s) 841
Cac8I GCNNGC 4 cut(s) 72, 312, 441, 791
CfoI GCGC 1 cut(s) 187
Cfr10I RCCGGY 1 cut(s) 731
Cfr13I GGNCC 7 cut(s) 24, 279, 421, 568, 635, 764, 863
ClaI ATCGAT 1 cut(s) 80
CseI GACGC 2 cut(s) 308, 927
Csp6I GTAC 4 cut(s) 559, 595, 709, 775
CspCI CAANNNNNGTGG 2 cut(s) 595, 630
CviAII CATG 5 cut(s) 71, 257, 334, 805, 973
CviQI GTAC 4 cut(s) 559, 595, 709, 775
DdeI CTNAG 3 cut(s) 103, 320, 498
DpnI GATC 8 cut(s) 79, 318, 482, 504, 611, 980, 987, 992
DpnII GATC 8 cut(s) 77, 316, 480, 502, 609, 978, 985, 990
EaeI YGGCCR 4 cut(s) 89, 176, 441, 563
EagI CGGCCG 1 cut(s) 89
Eam1104I CTCTTC 3 cut(s) 695, 699, 867
EarI CTCTTC 3 cut(s) 695, 699, 867
EciI GGCGGA 1 cut(s) 372
EclXI CGGCCG 1 cut(s) 89
Eco130I CCWWGG 2 cut(s) 191, 696
Eco47I GGWCC 4 cut(s) 279, 421, 568, 863
Eco52I CGGCCG 1 cut(s) 89
EcoRII CCWGG 4 cut(s) 55, 268, 927, 947
EcoT14I CCWWGG 2 cut(s) 191, 696
ErhI CCWWGG 2 cut(s) 191, 696
Esp3I CGTCTC 1 cut(s) 288
FaeI CATG 5 cut(s) 74, 260, 337, 808, 976
FaiI YATR 9 cut(s) 72, 250, 258, 290, 335, 383, 525, 806, 974
FaqI GGGAC 1 cut(s) 930
FatI CATG 5 cut(s) 70, 256, 333, 804, 972
FauI CCCGC 1 cut(s) 579
FblI GTMKAC 2 cut(s) 249, 642
Fnu4HI GCNGC 7 cut(s) 151, 154, 157, 160, 355, 942, 945
FokI GGATG 3 cut(s) 312, 697, 822
Fsp4HI GCNGC 7 cut(s) 151, 154, 157, 160, 355, 942, 945
FspBI CTAG 4 cut(s) 126, 144, 192, 938
GlaI GCGC 1 cut(s) 186
GluI GCNGC 7 cut(s) 151, 154, 157, 160, 355, 942, 945
GsuI CTGGAG 1 cut(s) 839
HapII CCGG 5 cut(s) 175, 329, 566, 732, 840
HgaI GACGC 2 cut(s) 308, 927
HhaI GCGC 1 cut(s) 187
Hin1II CATG 5 cut(s) 74, 260, 337, 808, 976
Hin6I GCGC 1 cut(s) 185
HinP1I GCGC 1 cut(s) 185
HincII GTYRAC 1 cut(s) 895
HindII GTYRAC 1 cut(s) 895
HinfI GANTC 3 cut(s) 82, 129, 845
HpaII CCGG 5 cut(s) 175, 329, 566, 732, 840
HphI GGTGA 1 cut(s) 854
Hpy166II GTNNAC 3 cut(s) 250, 643, 895
Hpy188I TCNGA 3 cut(s) 676, 990, 1016
Hpy188III TCNNGA 8 cut(s) 305, 329, 388, 419, 607, 682, 724, 754
Hpy8I GTNNAC 3 cut(s) 250, 643, 895
Hpy99I CGWCG 2 cut(s) 302, 488
HpyAV CCTTC 6 cut(s) 43, 205, 391, 661, 913, 919
HpyCH4III ACNGT 2 cut(s) 394, 779
HpyCH4IV ACGT 3 cut(s) 537, 744, 879
HpyCH4V TGCA 3 cut(s) 70, 150, 477
HpyF10VI GCNNNNNNNGC 7 cut(s) 156, 159, 184, 436, 460, 571, 795
HpyF3I CTNAG 3 cut(s) 103, 320, 498
HpySE526I ACGT 3 cut(s) 537, 744, 879
Hsp92II CATG 5 cut(s) 74, 260, 337, 808, 976
HspAI GCGC 1 cut(s) 185
Kpn2I TCCGGA 1 cut(s) 328
KpnI GGTACC 1 cut(s) 778
Kzo9I GATC 8 cut(s) 77, 316, 480, 502, 609, 978, 985, 990
LguI GCTCTTC 1 cut(s) 695
LmnI GCTCC 1 cut(s) 460
Lsp1109I GCAGC 6 cut(s) 162, 165, 168, 171, 931, 953
LweI GCATC 4 cut(s) 3, 137, 484, 675
MaeI CTAG 4 cut(s) 126, 144, 192, 938
MaeII ACGT 3 cut(s) 537, 744, 879
MaeIII GTNAC 4 cut(s) 106, 409, 817, 842
MalI GATC 8 cut(s) 79, 318, 482, 504, 611, 980, 987, 992
MboI GATC 8 cut(s) 77, 316, 480, 502, 609, 978, 985, 990
MboII GAAGA 5 cut(s) 162, 497, 682, 716, 884
MflI RGATCY 2 cut(s) 316, 502
MlsI TGGCCA 1 cut(s) 443
MluCI AATT 1 cut(s) 64
MluNI TGGCCA 1 cut(s) 443
MlyI GAGTC 2 cut(s) 123, 839
MmeI TCCRAC 1 cut(s) 539
Mox20I TGGCCA 1 cut(s) 443
MroI TCCGGA 1 cut(s) 328
MscI TGGCCA 1 cut(s) 443
MseI TTAA 2 cut(s) 828, 959
MslI CAYNNNNRTG 1 cut(s) 338
Msp20I TGGCCA 1 cut(s) 443
MspA1I CMGCKG 3 cut(s) 314, 439, 944
MspI CCGG 5 cut(s) 175, 329, 566, 732, 840
MspR9I CCNGG 5 cut(s) 57, 175, 270, 929, 949
Mva1269I GAATGC 2 cut(s) 479, 733
MvaI CCWGG 4 cut(s) 57, 270, 929, 949
MwoI GCNNNNNNNGC 7 cut(s) 156, 159, 184, 436, 460, 571, 795
NciI CCSGG 1 cut(s) 175
NdeII GATC 8 cut(s) 77, 316, 480, 502, 609, 978, 985, 990
NlaIII CATG 5 cut(s) 74, 260, 337, 808, 976
NlaIV GGNNCC 7 cut(s) 25, 52, 61, 462, 570, 766, 776
NmeAIII GCCGAG 1 cut(s) 67
NmuCI GTSAC 3 cut(s) 409, 817, 842
NspI RCATGY 3 cut(s) 74, 337, 976
PaeI GCATGC 1 cut(s) 74
PciI ACATGT 1 cut(s) 972
PciSI GCTCTTC 1 cut(s) 695
PctI GAATGC 2 cut(s) 479, 733
PfeI GAWTC 1 cut(s) 82
PflFI GACNNNGTC 1 cut(s) 257
PkrI GCNGC 7 cut(s) 152, 155, 158, 161, 356, 943, 946
PleI GAGTC 2 cut(s) 123, 839
PpsI GAGTC 2 cut(s) 123, 839
PscI ACATGT 1 cut(s) 972
Psp6I CCWGG 4 cut(s) 55, 268, 927, 947
PspGI CCWGG 4 cut(s) 55, 268, 927, 947
PspN4I GGNNCC 7 cut(s) 25, 52, 61, 462, 570, 766, 776
PspPI GGNCC 7 cut(s) 24, 279, 421, 568, 635, 764, 863
PsuI RGATCY 2 cut(s) 316, 502
PsyI GACNNNGTC 1 cut(s) 257
PvuII CAGCTG 2 cut(s) 439, 944
RsaI GTAC 4 cut(s) 560, 596, 710, 776
RsaNI GTAC 4 cut(s) 559, 595, 709, 775
RseI CAYNNNNRTG 1 cut(s) 338
SapI GCTCTTC 1 cut(s) 695
SaqAI TTAA 2 cut(s) 828, 959
SatI GCNGC 7 cut(s) 151, 154, 157, 160, 355, 942, 945
Sau3AI GATC 8 cut(s) 77, 316, 480, 502, 609, 978, 985, 990
Sau96I GGNCC 7 cut(s) 24, 279, 421, 568, 635, 764, 863
ScaI AGTACT 1 cut(s) 560
SchI GAGTC 2 cut(s) 123, 839
ScrFI CCNGG 5 cut(s) 57, 175, 270, 929, 949
SfaNI GCATC 4 cut(s) 3, 137, 484, 675
SfcI CTRYAG 1 cut(s) 229
SinI GGWCC 4 cut(s) 279, 421, 568, 863
SmiMI CAYNNNNRTG 1 cut(s) 338
SmlI CTYRAG 3 cut(s) 305, 605, 752
SmoI CTYRAG 3 cut(s) 305, 605, 752
SphI GCATGC 1 cut(s) 74
Sse9I AATT 1 cut(s) 64
SsiI CCGC 4 cut(s) 314, 354, 357, 572
SspMI CTAG 4 cut(s) 126, 144, 192, 938
StyD4I CCNGG 5 cut(s) 55, 173, 268, 927, 947
StyI CCWWGG 2 cut(s) 191, 696
TaaI ACNGT 2 cut(s) 394, 779
TaiI ACGT 3 cut(s) 540, 747, 882
TaqI TCGA 3 cut(s) 80, 345, 486
TaqII GACCGA 1 cut(s) 296
TasI AATT 1 cut(s) 64
TatI WGTACW 2 cut(s) 558, 708
TauI GCSGC 1 cut(s) 357
TfiI GAWTC 1 cut(s) 82
Tru1I TTAA 2 cut(s) 828, 959
Tru9I TTAA 2 cut(s) 828, 959
TscAI CASTG 2 cut(s) 399, 826
TseFI GTSAC 3 cut(s) 409, 817, 842
TseI GCWGC 6 cut(s) 150, 153, 156, 159, 941, 944
Tsp45I GTSAC 3 cut(s) 409, 817, 842
TspDTI ATGAA 1 cut(s) 187
TspRI CASTG 2 cut(s) 399, 826
Tth111I GACNNNGTC 1 cut(s) 257
VpaK11BI GGWCC 4 cut(s) 279, 421, 568, 863
XceI RCATGY 3 cut(s) 74, 337, 976
XmaJI CCTAGG 1 cut(s) 191
XmiI GTMKAC 2 cut(s) 249, 642
XspI CTAG 4 cut(s) 126, 144, 192, 938
ZrmI AGTACT 1 cut(s) 560
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.