Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0002098

Physical Location & Seq

Genomic Coordinates Forward (+)

39474405 .. 39476743

Gene Structure 2339 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1277500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1044 bp

ATGGTCTCTGCGATGCTCAATGGAGCTGAGAATCTCACCCTCGTCAGAGCAATAACCCCAAACGGGCTGAGTTTCAACGGGTCGGATCTTCACGGGAAGCAGTTTCTGAAAACGGGGTTTGCTTCAGCCACAAGAATTTCCAAATCTTGTGGTAGAATCAGTGTGCCCAGATGCAGCAGCAGCGGCAACAGCATCTCGGCTCCTAGGCCGGCTTCTCAGCCGAGGTTTATTCAGCACAAGAAGGAGGCTTTCTGGTTCTACAGATTCCTCTCAATTGTGTATGACCATGTTATAAACCCCGGGCATTGGACTGAGGACATGAGGGATGAAGCGCTCGAGCCGGCTGAGCTCACTGATCGGAGGATGATTGTGGTGGATGTTGGTGGCGGCACGGGGTTCACCACTCTGGGGATTGTGAAGCATGTGGATGCTAAGAATGTCACCATTCTTGACCAGTCACCCCATCAGCTTGCCAAGGCTAAGCAGAAGGAGCCCTTGAAGGAGTGCAAGATTATTGAGGGGGATGCTGAGGACCTCCCTTTTCGAACTGATTACGCTGATCGATATGTATCTGCTGGGAGCATCGAGTACTGGCCAGACCCGCAGCGTGGCATCAAGGAAGCATACAGGGTCTTAAAACTCGGAGGAAAAGCATGCGTAATTGGTCCTGTGTACCCAACATATTGGTTATCTCGCTTCTTTGCCGATGTATGGATGCTCTTCCCAAAGGAGGAAGAGTACAGTGAGTGGTTCCAGAAGGCAGGGTTTAAAAATGTCCAGCTGAAAAGAATTGGCCCGAAATGGTATCGTGGGGTTCGCCGCCATGGATTGATCATGGGATGTTCTGTAACAGGCGTTAAGCCTGCTTCCGGGGATTCTCCTTTACAGCTTGGTCCGAAAGCAGAGGACGTGACAAAGCCGGTGAACCCATGGACGTTATTCGTGCGGTTCATGTTGGGTGTCATGGCAGCAGCATACTATGTACTGGTGCCTATATACATGTGGATCAAAGATAAAATTGTACCCAAAGGCCAACCAATCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006732 GO:0006766 GO:0006775 GO:0008150 GO:0008152 GO:0008168 GO:0008757 GO:0009058 GO:0009108 GO:0009110 GO:0009507 GO:0009526 GO:0009528 GO:0009536 GO:0009706 GO:0009941 GO:0009987 GO:0010189 GO:0010236 GO:0016020 GO:0016740 GO:0016741 GO:0018130 GO:0019866 GO:0031090 GO:0031967 GO:0031969 GO:0031975 GO:0032259 GO:0042170 GO:0042180 GO:0042181 GO:0042360 GO:0042362 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044249 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0051186 GO:0051188 GO:0051741 GO:0071704 GO:1901360 GO:1901362 GO:1901576 GO:1901615 GO:1901617 GO:1901661 GO:1901663

KEGG Pathways

Metabolic & Signaling

ko00130 ko01100 ko01110 map00130 map01100 map01110

Pfam Domains

Protein Families

Methyltransf_11 Methyltransf_25

Protein Analysis

348

Amino Acids

38.95

Weight (kDa)

9.37

Isoelectric Point (pI)

34.1

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Methyltransf_23	PF13489	107 - 261	2.7e-06	Methyltransferase domain
Methyltransf_31	PF13847	120 - 224	1.6e-11	Methyltransferase domain
Ubie_methyltran	PF01209	122 - 223	3.6e-12	ubiE/COQ5 methyltransferase family
Methyltransf_25	PF13649	124 - 216	1.1e-16	Methyltransferase domain
Methyltransf_11	PF08241	125 - 219	3.1e-19	Methyltransferase domain
Methyltransf_12	PF08242	125 - 217	6.5e-10	Methyltransferase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002098)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G63410
fragaria_vesca	FvH4_2g22850 FvH4_4g01770
malus_domestica	MD03G1256900.v1.1 MD11G1277500.v1.1 MD13G1201900.v1.1 MD16G1202200.v1.1
prunus_persica	Prupe.1G023700_v2.0.a1 Prupe.1G023700_v2.0.a1 Prupe.1G023700_v2.0.a1 Prupe.1G023700_v2.0.a1 Prupe.8G233800_v2.0.a1
pyrus_communis	pycom03g20360 pycom13g17530 pycom16g17060
rosa_chinensis	RchiOBHm_Chr4g0388681 RchiOBHm_Chr4g0388811 RchiOBHm_Chr6g0289771
rosa_laevigata	RLG00000010027 RLG00000012268
rosa_multiflora	Rmu_co8119594.1_g000001 Rmu_sc0000697.1_g000014 Rmu_sc0004459.1_g000002 Rmu_sc0005640.1_g000008 Rmu_sc0016023.1_g000001 Rmu_sc0027068.1_g000001
rosa_roxburghii	Rroxscaffold_5G00335090 Rroxscaffold_7G00177560 Rroxscaffold_7G00178080
rosa_rugosa	Rorug03G0320000 Rorug06G0206500 Rorug06G0206600
rosa_samantha	Rh4AG024800 Rh4BG017800 Rh4CG026800 Rh4CG027500 Rh4DG018100 Rh6AG318300 Rh6BG325600 Rh6CG331400 Rh6DG316900
rosa_wichuraiana	Rw4G001730 Rw4G001770 Rw6G027460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	293
AccB1I	GGYRCC	1 cut(s)	988
AciI	CCGC	5 cut(s)	183, 387, 602, 820, 946
AclWI	GGATC	2 cut(s)	93, 1013
AcoI	YGGCCR	1 cut(s)	593
AcsI	RAATTY	1 cut(s)	135
AcuI	CTGAAG	1 cut(s)	108
AfaI	GTAC	5 cut(s)	590, 674, 740, 984, 1023
AfeI	AGCGCT	1 cut(s)	333
AfiI	CCNNNNNNNGG	7 cut(s)	63, 306, 408, 608, 711, 730, 869
AflIII	ACRYGT	1 cut(s)	999
AgsI	TTSAA	2 cut(s)	76, 499
AjiI	CACGTC	1 cut(s)	910
AluBI	AGCT	5 cut(s)	26, 349, 469, 781, 889
AluI	AGCT	5 cut(s)	26, 349, 469, 781, 889
Alw21I	GWGCWC	1 cut(s)	351
Alw26I	GTCTC	1 cut(s)	10
AlwI	GGATC	2 cut(s)	93, 1013
AlwNI	CAGNNNCTG	1 cut(s)	106
Ama87I	CYCGRG	2 cut(s)	299, 335
Aor51HI	AGCGCT	1 cut(s)	333
AoxI	GGCC	4 cut(s)	206, 593, 793, 1030
ApeKI	GCWGC	6 cut(s)	174, 177, 180, 604, 968, 971
ApoI	RAATTY	1 cut(s)	135
AspA2I	CCTAGG	1 cut(s)	203
AspLEI	GCGC	1 cut(s)	334
AspS9I	GGNCC	4 cut(s)	532, 665, 794, 893
AsuC2I	CCSGG	3 cut(s)	300, 301, 871
AsuHPI	GGTGA	5 cut(s)	28, 391, 433, 450, 934
AsuII	TTCGAA	1 cut(s)	544
AvaI	CYCGRG	2 cut(s)	299, 335
AvaII	GGWCC	3 cut(s)	532, 665, 893
AvrII	CCTAGG	1 cut(s)	203
BaeGI	GKGCMC	1 cut(s)	168
BalI	TGGCCA	1 cut(s)	595
BanI	GGYRCC	1 cut(s)	988
BanII	GRGCYC	2 cut(s)	351, 495
Bbv12I	GWGCWC	1 cut(s)	351
BbvCI	CCTCAGC	1 cut(s)	528
BbvI	GCAGC	6 cut(s)	186, 189, 192, 616, 980, 983
BccI	CCATC	1 cut(s)	471
BclI	TGATCA	1 cut(s)	831
BcnI	CCSGG	3 cut(s)	300, 301, 871
BcoDI	GTCTC	1 cut(s)	10
BfaI	CTAG	1 cut(s)	204
BfmI	CTRYAG	1 cut(s)	259
BfoI	RGCGCY	1 cut(s)	335
BisI	GCNGC	9 cut(s)	175, 178, 181, 184, 388, 605, 820, 969, 972
BlnI	CCTAGG	1 cut(s)	203
BlpI	GCTNAGC	2 cut(s)	345, 480
BlsI	GCNGC	9 cut(s)	176, 179, 182, 185, 389, 606, 821, 970, 973
BmcAI	AGTACT	1 cut(s)	590
Bme1390I	CCNGG	3 cut(s)	300, 301, 871
Bme18I	GGWCC	3 cut(s)	532, 665, 893
BmeT110I	CYCGRG	2 cut(s)	299, 335
BmgBI	CACGTC	1 cut(s)	910
BmgT120I	GGNCC	4 cut(s)	532, 665, 794, 893
BmiI	GGNNCC	4 cut(s)	201, 492, 752, 990
BmrFI	CCNGG	3 cut(s)	300, 301, 871
BmsI	GCATC	8 cut(s)	3, 161, 201, 418, 514, 591, 621, 705
Bpu10I	CCTNAGC	1 cut(s)	528
Bpu1102I	GCTNAGC	2 cut(s)	345, 480
Bpu14I	TTCGAA	1 cut(s)	544
BpuMI	CCSGG	3 cut(s)	300, 301, 871
Bsa29I	ATCGAT	1 cut(s)	562
BsaBI	GATNNNNATC	1 cut(s)	568
BsaI	GGTCTC	1 cut(s)	10
BsaJI	CCNNGG	8 cut(s)	203, 221, 298, 299, 474, 823, 870, 929
BsaXI	ACNNNNNCTCC	2 cut(s)	722, 752
Bsc4I	CCNNNNNNNGG	7 cut(s)	63, 306, 408, 608, 711, 730, 869
Bse118I	RCCGGY	3 cut(s)	208, 340, 919
Bse1I	ACTGG	3 cut(s)	454, 596, 990
Bse8I	GATNNNNATC	1 cut(s)	568
BseCI	ATCGAT	1 cut(s)	562
BseDI	CCNNGG	8 cut(s)	203, 221, 298, 299, 474, 823, 870, 929
BseGI	GGATG	7 cut(s)	331, 369, 382, 433, 529, 720, 845
BseJI	GATNNNNATC	1 cut(s)	568
BseLI	CCNNNNNNNGG	7 cut(s)	63, 306, 408, 608, 711, 730, 869
BseMII	CTCAG	6 cut(s)	18, 59, 230, 303, 336, 519
BseNI	ACTGG	3 cut(s)	454, 596, 990
BseSI	GKGCMC	1 cut(s)	168
BseXI	GCAGC	6 cut(s)	186, 189, 192, 616, 980, 983
BseYI	CCCAGC	1 cut(s)	575
BshFI	GGCC	4 cut(s)	208, 595, 795, 1032
BshNI	GGYRCC	1 cut(s)	988
BshVI	ATCGAT	1 cut(s)	562
BsiHKAI	GWGCWC	1 cut(s)	351
BsiHKCI	CYCGRG	2 cut(s)	299, 335
BsiSI	CCGG	5 cut(s)	209, 300, 341, 870, 920
BslI	CCNNNNNNNGG	7 cut(s)	63, 306, 408, 608, 711, 730, 869
BsmAI	GTCTC	1 cut(s)	10
BsnI	GGCC	4 cut(s)	208, 595, 795, 1032
Bso31I	GGTCTC	1 cut(s)	10
BsoBI	CYCGRG	2 cut(s)	299, 335
Bsp119I	TTCGAA	1 cut(s)	544
Bsp1286I	GDGCHC	3 cut(s)	168, 351, 495
Bsp143I	GATC	5 cut(s)	85, 355, 559, 831, 1005
Bsp1720I	GCTNAGC	2 cut(s)	345, 480
Bsp19I	CCATGG	2 cut(s)	823, 929
BspACI	CCGC	5 cut(s)	183, 387, 602, 820, 946
BspANI	GGCC	4 cut(s)	208, 595, 795, 1032
BspCNI	CTCAG	6 cut(s)	19, 60, 229, 304, 337, 520
BspDI	ATCGAT	1 cut(s)	562
BspLI	GGNNCC	4 cut(s)	201, 492, 752, 990
BspPI	GGATC	2 cut(s)	93, 1013
BspQI	GCTCTTC	1 cut(s)	725
BspT104I	TTCGAA	1 cut(s)	544
BspT107I	GGYRCC	1 cut(s)	988
BspTNI	GGTCTC	1 cut(s)	10
BsrFI	RCCGGY	3 cut(s)	208, 340, 919
BsrI	ACTGG	3 cut(s)	454, 596, 990
BssAI	RCCGGY	3 cut(s)	208, 340, 919
BssECI	CCNNGG	8 cut(s)	203, 221, 298, 299, 474, 823, 870, 929
BssMI	GATC	5 cut(s)	85, 355, 559, 831, 1005
BssT1I	CCWWGG	4 cut(s)	203, 474, 823, 929
Bst4CI	ACNGT	1 cut(s)	743
Bst6I	CTCTTC	2 cut(s)	725, 729
BstBI	TTCGAA	1 cut(s)	544
BstC8I	GCNNGC	5 cut(s)	210, 342, 471, 655, 864
BstDEI	CTNAG	8 cut(s)	27, 68, 216, 312, 345, 432, 480, 528
BstDSI	CCRYGG	2 cut(s)	823, 929
BstF5I	GGATG	7 cut(s)	331, 369, 382, 433, 529, 720, 845
BstH2I	RGCGCY	1 cut(s)	335
BstHHI	GCGC	1 cut(s)	334
BstKTI	GATC	5 cut(s)	88, 358, 562, 834, 1008
BstMAI	GTCTC	1 cut(s)	10
BstMBI	GATC	5 cut(s)	85, 355, 559, 831, 1005
BstMWI	GCNNNNNNNGC	6 cut(s)	180, 183, 189, 346, 490, 601
BstNSI	RCATGY	3 cut(s)	425, 657, 1003
BstSCI	CCNGG	3 cut(s)	298, 299, 869
BstSFI	CTRYAG	1 cut(s)	259
BstSLI	GKGCMC	1 cut(s)	168
BstV1I	GCAGC	6 cut(s)	186, 189, 192, 616, 980, 983
BstX2I	RGATCY	1 cut(s)	85
BstXI	CCANNNNNNTGG	1 cut(s)	684
BstYI	RGATCY	1 cut(s)	85
Bsu15I	ATCGAT	1 cut(s)	562
BsuRI	GGCC	4 cut(s)	208, 595, 795, 1032
BsuTUI	ATCGAT	1 cut(s)	562
BtgI	CCRYGG	2 cut(s)	823, 929
BtgZI	GCGATG	1 cut(s)	26
BtrI	CACGTC	1 cut(s)	910
BtsCI	GGATG	7 cut(s)	331, 369, 382, 433, 529, 720, 845
BtsIMutI	CAGTG	3 cut(s)	166, 351, 748
Cac8I	GCNNGC	5 cut(s)	210, 342, 471, 655, 864
CaiI	CAGNNNCTG	1 cut(s)	106
CfoI	GCGC	1 cut(s)	334
Cfr10I	RCCGGY	3 cut(s)	208, 340, 919
Cfr13I	GGNCC	4 cut(s)	532, 665, 794, 893
Cfr9I	CCCGGG	1 cut(s)	299
ClaI	ATCGAT	1 cut(s)	562
Csp6I	GTAC	5 cut(s)	589, 673, 739, 983, 1022
CspCI	CAANNNNNGTGG	2 cut(s)	130, 165
CviQI	GTAC	5 cut(s)	589, 673, 739, 983, 1022
DdeI	CTNAG	8 cut(s)	27, 68, 216, 312, 345, 432, 480, 528
DpnI	GATC	5 cut(s)	87, 357, 561, 833, 1007
DpnII	GATC	5 cut(s)	85, 355, 559, 831, 1005
DraI	TTTAAA	1 cut(s)	769
EaeI	YGGCCR	1 cut(s)	593
Eam1104I	CTCTTC	2 cut(s)	725, 729
EarI	CTCTTC	2 cut(s)	725, 729
Ecl136II	GAGCTC	1 cut(s)	349
Eco130I	CCWWGG	4 cut(s)	203, 474, 823, 929
Eco24I	GRGCYC	2 cut(s)	351, 495
Eco31I	GGTCTC	1 cut(s)	10
Eco47I	GGWCC	3 cut(s)	532, 665, 893
Eco47III	AGCGCT	1 cut(s)	333
Eco53kI	GAGCTC	1 cut(s)	349
Eco57I	CTGAAG	1 cut(s)	108
Eco88I	CYCGRG	2 cut(s)	299, 335
EcoICRI	GAGCTC	1 cut(s)	349
EcoO109I	RGGNCCY	1 cut(s)	532
EcoT14I	CCWWGG	4 cut(s)	203, 474, 823, 929
EcoT38I	GRGCYC	2 cut(s)	351, 495
ErhI	CCWWGG	4 cut(s)	203, 474, 823, 929
FalI	AAGNNNNNCTT	2 cut(s)	479, 511
FauI	CCCGC	1 cut(s)	609
FbaI	TGATCA	1 cut(s)	831
Fnu4HI	GCNGC	9 cut(s)	175, 178, 181, 184, 388, 605, 820, 969, 972
FokI	GGATG	7 cut(s)	338, 376, 389, 440, 536, 727, 852
FriOI	GRGCYC	2 cut(s)	351, 495
Fsp4HI	GCNGC	9 cut(s)	175, 178, 181, 184, 388, 605, 820, 969, 972
FspBI	CTAG	1 cut(s)	204
GlaI	GCGC	1 cut(s)	333
GluI	GCNGC	9 cut(s)	175, 178, 181, 184, 388, 605, 820, 969, 972
GsaI	CCCAGC	1 cut(s)	579
HaeII	RGCGCY	1 cut(s)	335
HaeIII	GGCC	4 cut(s)	208, 595, 795, 1032
HapII	CCGG	5 cut(s)	209, 300, 341, 870, 920
HhaI	GCGC	1 cut(s)	334
Hin6I	GCGC	1 cut(s)	332
HinP1I	GCGC	1 cut(s)	332
HinfI	GANTC	4 cut(s)	31, 156, 264, 875
HpaII	CCGG	5 cut(s)	209, 300, 341, 870, 920
HphI	GGTGA	5 cut(s)	28, 391, 433, 450, 934
Hpy166II	GTNNAC	3 cut(s)	399, 673, 925
Hpy188I	TCNGA	7 cut(s)	47, 85, 108, 360, 644, 897, 1043
Hpy188III	TCNNGA	2 cut(s)	449, 754
Hpy8I	GTNNAC	3 cut(s)	399, 673, 925
HpyAV	CCTTC	4 cut(s)	235, 481, 493, 751
HpyCH4III	ACNGT	1 cut(s)	743
HpyCH4IV	ACGT	2 cut(s)	909, 935
HpyCH4V	TGCA	2 cut(s)	174, 507
HpyF10VI	GCNNNNNNNGC	6 cut(s)	180, 183, 189, 346, 490, 601
HpyF3I	CTNAG	8 cut(s)	27, 68, 216, 312, 345, 432, 480, 528
HpySE526I	ACGT	2 cut(s)	909, 935
HspAI	GCGC	1 cut(s)	332
KroI	GCCGGC	2 cut(s)	208, 340
KroNI	GCCGGC	2 cut(s)	210, 342
Ksp22I	TGATCA	1 cut(s)	831
Kzo9I	GATC	5 cut(s)	85, 355, 559, 831, 1005
LguI	GCTCTTC	1 cut(s)	725
LmnI	GCTCC	4 cut(s)	23, 205, 490, 579
Lsp1109I	GCAGC	6 cut(s)	186, 189, 192, 616, 980, 983
LweI	GCATC	8 cut(s)	3, 161, 201, 418, 514, 591, 621, 705
MaeI	CTAG	1 cut(s)	204
MaeII	ACGT	2 cut(s)	909, 935
MaeIII	GTNAC	4 cut(s)	439, 456, 847, 910
MalI	GATC	5 cut(s)	87, 357, 561, 833, 1007
MboI	GATC	5 cut(s)	85, 355, 559, 831, 1005
MboII	GAAGA	3 cut(s)	80, 712, 746
MfeI	CAATTG	1 cut(s)	273
MflI	RGATCY	1 cut(s)	85
MhlI	GDGCHC	3 cut(s)	168, 351, 495
MlsI	TGGCCA	1 cut(s)	595
MluCI	AATT	5 cut(s)	135, 273, 660, 789, 1017
MluNI	TGGCCA	1 cut(s)	595
MmeI	TCCRAC	1 cut(s)	63
Mox20I	TGGCCA	1 cut(s)	595
MroNI	GCCGGC	2 cut(s)	208, 340
MscI	TGGCCA	1 cut(s)	595
MseI	TTAA	3 cut(s)	635, 768, 858
MslI	CAYNNNNRTG	1 cut(s)	426
Msp20I	TGGCCA	1 cut(s)	595
MspA1I	CMGCKG	2 cut(s)	183, 781
MspI	CCGG	5 cut(s)	209, 300, 341, 870, 920
MspR9I	CCNGG	3 cut(s)	300, 301, 871
MunI	CAATTG	1 cut(s)	273
MwoI	GCNNNNNNNGC	6 cut(s)	180, 183, 189, 346, 490, 601
NaeI	GCCGGC	2 cut(s)	210, 342
NciI	CCSGG	3 cut(s)	300, 301, 871
NcoI	CCATGG	2 cut(s)	823, 929
NdeII	GATC	5 cut(s)	85, 355, 559, 831, 1005
NgoMIV	GCCGGC	2 cut(s)	208, 340
NlaIV	GGNNCC	4 cut(s)	201, 492, 752, 990
NmeAIII	GCCGAG	2 cut(s)	176, 246
NmuCI	GTSAC	3 cut(s)	439, 456, 910
NspI	RCATGY	3 cut(s)	425, 657, 1003
NspV	TTCGAA	1 cut(s)	544
PaeI	GCATGC	1 cut(s)	657
PaeR7I	CTCGAG	1 cut(s)	335
PciI	ACATGT	1 cut(s)	999
PciSI	GCTCTTC	1 cut(s)	725
PdiI	GCCGGC	2 cut(s)	210, 342
PfeI	GAWTC	4 cut(s)	31, 156, 264, 875
PkrI	GCNGC	9 cut(s)	176, 179, 182, 185, 389, 606, 821, 970, 973
PpuMI	RGGWCCY	1 cut(s)	532
PscI	ACATGT	1 cut(s)	999
PsiI	TTATAA	1 cut(s)	293
Psp124BI	GAGCTC	1 cut(s)	351
Psp5II	RGGWCCY	1 cut(s)	532
PspFI	CCCAGC	1 cut(s)	575
PspN4I	GGNNCC	4 cut(s)	201, 492, 752, 990
PspPI	GGNCC	4 cut(s)	532, 665, 794, 893
PspPPI	RGGWCCY	1 cut(s)	532
PspXI	VCTCGAGB	1 cut(s)	335
PstNI	CAGNNNCTG	1 cut(s)	106
PsuI	RGATCY	1 cut(s)	85
PvuII	CAGCTG	1 cut(s)	781
RsaI	GTAC	5 cut(s)	590, 674, 740, 984, 1023
RsaNI	GTAC	5 cut(s)	589, 673, 739, 983, 1022
RseI	CAYNNNNRTG	1 cut(s)	426
SacI	GAGCTC	1 cut(s)	351
SapI	GCTCTTC	1 cut(s)	725
SaqAI	TTAA	3 cut(s)	635, 768, 858
SatI	GCNGC	9 cut(s)	175, 178, 181, 184, 388, 605, 820, 969, 972
Sau3AI	GATC	5 cut(s)	85, 355, 559, 831, 1005
Sau96I	GGNCC	4 cut(s)	532, 665, 794, 893
ScaI	AGTACT	1 cut(s)	590
ScrFI	CCNGG	3 cut(s)	300, 301, 871
SduI	GDGCHC	3 cut(s)	168, 351, 495
SetI	ASST	9 cut(s)	28, 227, 351, 471, 537, 783, 891, 912, 938
SfaNI	GCATC	8 cut(s)	3, 161, 201, 418, 514, 591, 621, 705
SfcI	CTRYAG	1 cut(s)	259
Sfr274I	CTCGAG	1 cut(s)	335
SfuI	TTCGAA	1 cut(s)	544
SinI	GGWCC	3 cut(s)	532, 665, 893
SlaI	CTCGAG	1 cut(s)	335
SmaI	CCCGGG	1 cut(s)	301
SmiMI	CAYNNNNRTG	1 cut(s)	426
SmlI	CTYRAG	1 cut(s)	335
SmoI	CTYRAG	1 cut(s)	335
SphI	GCATGC	1 cut(s)	657
Sse9I	AATT	5 cut(s)	135, 273, 660, 789, 1017
SsiI	CCGC	5 cut(s)	183, 387, 602, 820, 946
SspMI	CTAG	1 cut(s)	204
SstI	GAGCTC	1 cut(s)	351
StyD4I	CCNGG	3 cut(s)	298, 299, 869
StyI	CCWWGG	4 cut(s)	203, 474, 823, 929
TaaI	ACNGT	1 cut(s)	743
TaiI	ACGT	2 cut(s)	912, 938
TaqI	TCGA	4 cut(s)	336, 544, 562, 585
TasI	AATT	5 cut(s)	135, 273, 660, 789, 1017
TatI	WGTACW	3 cut(s)	588, 738, 982
TauI	GCSGC	3 cut(s)	186, 390, 822
TfiI	GAWTC	4 cut(s)	31, 156, 264, 875
Tru1I	TTAA	3 cut(s)	635, 768, 858
Tru9I	TTAA	3 cut(s)	635, 768, 858
TscAI	CASTG	3 cut(s)	166, 358, 748
TseFI	GTSAC	3 cut(s)	439, 456, 910
TseI	GCWGC	6 cut(s)	174, 177, 180, 604, 968, 971
Tsp45I	GTSAC	3 cut(s)	439, 456, 910
TspDTI	ATGAA	2 cut(s)	342, 940
TspMI	CCCGGG	1 cut(s)	299
TspRI	CASTG	3 cut(s)	166, 358, 748
VpaK11BI	GGWCC	3 cut(s)	532, 665, 893
XapI	RAATTY	1 cut(s)	135
XceI	RCATGY	3 cut(s)	425, 657, 1003
XhoI	CTCGAG	1 cut(s)	335
XmaI	CCCGGG	1 cut(s)	299
XmaJI	CCTAGG	1 cut(s)	203
XspI	CTAG	1 cut(s)	204
ZrmI	AGTACT	1 cut(s)	590

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.