AT4G24026

No description available

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Forward (+)
12486343 .. 12486855
513 bp
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UTR
Exon/CDS
Intron
AT4G24026.1

Sequence Viewer

Length: 237 bp
ATGGACAAAAGCATCAGCATCACCTCCAACGTTAGCACGACGACTTCCATGGAAAAGATCGACCACGCCGCTAGCTGGATCAGCGCAACCGTAATATCCGCTTTCTTCACCTCCCTCGAACGCTGCGCCTGCGTCAATCTCTCCACCTCTCATGACGACGACGACGACGACGACGACGAATCCCATCACCGTCCTCTCGCTCTCTCCGCCGCTCCTCATCCAAACGACACCGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

78

Amino Acids

8.43

Weight (kDa)

4.4

Isoelectric Point (pI)

17.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 212
AciI CCGC 4 cut(s) 69, 99, 207, 210
AclI AACGTT 1 cut(s) 30
AclWI GGATC 1 cut(s) 86
AfiI CCNNNNNNNGG 1 cut(s) 75
AluBI AGCT 1 cut(s) 75
AluI AGCT 1 cut(s) 75
AlwI GGATC 1 cut(s) 86
ApeKI GCWGC 1 cut(s) 123
AspLEI GCGC 2 cut(s) 86, 128
AsuHPI GGTGA 3 cut(s) 13, 100, 179
AsuNHI GCTAGC 1 cut(s) 71
BbvI GCAGC 1 cut(s) 110
BccI CCATC 1 cut(s) 192
BfaI CTAG 1 cut(s) 72
BisI GCNGC 3 cut(s) 69, 124, 210
BlsI GCNGC 3 cut(s) 70, 125, 211
BmsI GCATC 2 cut(s) 21, 27
BmtI GCTAGC 1 cut(s) 75
BsaJI CCNNGG 1 cut(s) 48
Bsc4I CCNNNNNNNGG 1 cut(s) 75
BseDI CCNNGG 1 cut(s) 48
BseGI GGATG 1 cut(s) 217
BseLI CCNNNNNNNGG 1 cut(s) 75
BseRI GAGGAG 1 cut(s) 204
BseXI GCAGC 1 cut(s) 110
BslI CCNNNNNNNGG 1 cut(s) 75
Bsp143I GATC 2 cut(s) 57, 78
Bsp19I CCATGG 1 cut(s) 48
BspACI CCGC 4 cut(s) 69, 99, 207, 210
BspHI TCATGA 1 cut(s) 151
BspOI GCTAGC 1 cut(s) 75
BspPI GGATC 1 cut(s) 86
BsrBI CCGCTC 1 cut(s) 212
BssECI CCNNGG 1 cut(s) 48
BssMI GATC 2 cut(s) 57, 78
BssT1I CCWWGG 1 cut(s) 48
Bst4CI ACNGT 3 cut(s) 91, 191, 232
BstC8I GCNNGC 2 cut(s) 73, 130
BstDSI CCRYGG 1 cut(s) 48
BstF5I GGATG 1 cut(s) 217
BstHHI GCGC 2 cut(s) 86, 128
BstKTI GATC 2 cut(s) 60, 81
BstMBI GATC 2 cut(s) 57, 78
BstMWI GCNNNNNNNGC 3 cut(s) 81, 129, 206
BstV1I GCAGC 1 cut(s) 110
BtgI CCRYGG 1 cut(s) 48
BtsCI GGATG 1 cut(s) 217
Cac8I GCNNGC 2 cut(s) 73, 130
CciI TCATGA 1 cut(s) 151
CfoI GCGC 2 cut(s) 86, 128
CseI GACGC 1 cut(s) 121
CviAII CATG 2 cut(s) 49, 152
CviJI RGCY 1 cut(s) 75
CviKI_1 RGCY 1 cut(s) 75
DpnI GATC 2 cut(s) 59, 80
DpnII GATC 2 cut(s) 57, 78
EciI GGCGGA 1 cut(s) 196
Eco130I CCWWGG 1 cut(s) 48
EcoT14I CCWWGG 1 cut(s) 48
ErhI CCWWGG 1 cut(s) 48
FaeI CATG 2 cut(s) 52, 155
FaiI YATR 2 cut(s) 50, 153
FatI CATG 2 cut(s) 48, 151
Fnu4HI GCNGC 3 cut(s) 69, 124, 210
FokI GGATG 1 cut(s) 204
Fsp4HI GCNGC 3 cut(s) 69, 124, 210
FspBI CTAG 1 cut(s) 72
GlaI GCGC 2 cut(s) 85, 127
GluI GCNGC 3 cut(s) 69, 124, 210
HgaI GACGC 1 cut(s) 121
HhaI GCGC 2 cut(s) 86, 128
Hin1II CATG 2 cut(s) 52, 155
Hin6I GCGC 2 cut(s) 84, 126
HinP1I GCGC 2 cut(s) 84, 126
HinfI GANTC 1 cut(s) 179
HphI GGTGA 3 cut(s) 13, 100, 179
Hpy188III TCNNGA 1 cut(s) 152
Hpy99I CGWCG 8 cut(s) 43, 161, 164, 167, 170, 173, 176, 179
HpyCH4III ACNGT 3 cut(s) 91, 191, 232
HpyCH4IV ACGT 1 cut(s) 30
HpyF10VI GCNNNNNNNGC 3 cut(s) 81, 129, 206
HpySE526I ACGT 1 cut(s) 30
Hsp92II CATG 2 cut(s) 52, 155
HspAI GCGC 2 cut(s) 84, 126
Kzo9I GATC 2 cut(s) 57, 78
LmnI GCTCC 1 cut(s) 217
LpnPI CCDG 2 cut(s) 61, 142
Lsp1109I GCAGC 1 cut(s) 110
LweI GCATC 2 cut(s) 21, 27
MaeI CTAG 1 cut(s) 72
MaeII ACGT 1 cut(s) 30
MalI GATC 2 cut(s) 59, 80
MbiI CCGCTC 1 cut(s) 212
MboI GATC 2 cut(s) 57, 78
MboII GAAGA 1 cut(s) 97
MmeI TCCRAC 1 cut(s) 51
MnlI CCTC 6 cut(s) 34, 121, 125, 157, 204, 225
MwoI GCNNNNNNNGC 3 cut(s) 81, 129, 206
NcoI CCATGG 1 cut(s) 48
NdeII GATC 2 cut(s) 57, 78
NheI GCTAGC 1 cut(s) 71
NlaIII CATG 2 cut(s) 52, 155
PagI TCATGA 1 cut(s) 151
PcsI WCGNNNNNNNCGW 5 cut(s) 162, 165, 168, 171, 174
PfeI GAWTC 1 cut(s) 179
PkrI GCNGC 3 cut(s) 70, 125, 211
Psp1406I AACGTT 1 cut(s) 30
SatI GCNGC 3 cut(s) 69, 124, 210
Sau3AI GATC 2 cut(s) 57, 78
SetI ASST 5 cut(s) 26, 33, 77, 113, 149
SfaNI GCATC 2 cut(s) 21, 27
SgeI CNNG 9 cut(s) 49, 61, 77, 84, 88, 128, 141, 164, 209
SsiI CCGC 4 cut(s) 69, 99, 207, 210
SspMI CTAG 1 cut(s) 72
StyI CCWWGG 1 cut(s) 48
TaaI ACNGT 3 cut(s) 91, 191, 232
TaiI ACGT 1 cut(s) 33
TaqI TCGA 2 cut(s) 60, 117
TauI GCSGC 2 cut(s) 71, 212
TfiI GAWTC 1 cut(s) 179
TseI GCWGC 1 cut(s) 123
XspI CTAG 1 cut(s) 72
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.