Rh6AG315700

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
Physical Location & Seq
Reverse (-)
51428189 .. 51428610
422 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG315700.1

Sequence Viewer

Length: 285 bp
ATGATCTGGTTTTGTTCCTCTACATCGCCGTTGCGGATGTTTGGCCCTCCACCCCAGCTTTCGACTGGATATTTGTCGGCTTTGTCGCCGTTGCAGATTAGCGCCACCGTCTCCTCCGCCTTCTTTTCTTCCCTCAAGAGCTTCTCTTGCGTCAATATCGCCACCATGAACGCCGACGATGACAACGAGGCCGCCCACCGCCCTCTCGCTCTCACCAATCTCACCCGCTCTGATCAACAGCACCACCACGCAAATGCAAACGACATCACTCAGTTCCCCGTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

94

Amino Acids

10.23

Weight (kDa)

5.98

Isoelectric Point (pI)

49.54

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 228
AciI CCGC 5 cut(s) 34, 117, 192, 199, 226
AluBI AGCT 2 cut(s) 58, 141
AluI AGCT 2 cut(s) 58, 141
Alw26I GTCTC 1 cut(s) 115
AoxI GGCC 2 cut(s) 43, 189
ArsI GACNNNNNNTTYG 2 cut(s) 55, 87
AspLEI GCGC 1 cut(s) 104
AspS9I GGNCC 1 cut(s) 44
AsuHPI GGTGA 2 cut(s) 205, 214
BceAI ACGGC 2 cut(s) 13, 73
BclI TGATCA 1 cut(s) 232
BcoDI GTCTC 1 cut(s) 115
BfoI RGCGCY 1 cut(s) 105
BisI GCNGC 1 cut(s) 192
BlsI GCNGC 1 cut(s) 193
BmgT120I GGNCC 1 cut(s) 44
BpuEI CTTGAG 1 cut(s) 119
Bse1I ACTGG 1 cut(s) 70
BseGI GGATG 1 cut(s) 42
BseMII CTCAG 1 cut(s) 284
BseNI ACTGG 1 cut(s) 70
BseRI GAGGAG 1 cut(s) 103
BseYI CCCAGC 1 cut(s) 54
BshFI GGCC 2 cut(s) 45, 191
BsmAI GTCTC 1 cut(s) 115
BsmBI CGTCTC 1 cut(s) 115
BsnI GGCC 2 cut(s) 45, 191
Bsp143I GATC 2 cut(s) 3, 232
BspACI CCGC 5 cut(s) 34, 117, 192, 199, 226
BspANI GGCC 2 cut(s) 45, 191
BspCNI CTCAG 1 cut(s) 283
BsrBI CCGCTC 1 cut(s) 228
BsrI ACTGG 1 cut(s) 70
BssMI GATC 2 cut(s) 3, 232
Bst4CI ACNGT 1 cut(s) 109
BstDEI CTNAG 1 cut(s) 270
BstF5I GGATG 1 cut(s) 42
BstH2I RGCGCY 1 cut(s) 105
BstHHI GCGC 1 cut(s) 104
BstKTI GATC 2 cut(s) 6, 235
BstMAI GTCTC 1 cut(s) 115
BstMBI GATC 2 cut(s) 3, 232
BstMWI GCNNNNNNNGC 1 cut(s) 147
BsuRI GGCC 2 cut(s) 45, 191
BtgZI GCGATG 1 cut(s) 9
BtsCI GGATG 1 cut(s) 42
CfoI GCGC 1 cut(s) 104
Cfr13I GGNCC 1 cut(s) 44
CseI GACGC 1 cut(s) 139
CviAII CATG 1 cut(s) 166
CviJI RGCY 5 cut(s) 45, 58, 80, 141, 191
CviKI_1 RGCY 5 cut(s) 45, 58, 80, 141, 191
DdeI CTNAG 1 cut(s) 270
DpnI GATC 2 cut(s) 5, 234
DpnII GATC 2 cut(s) 3, 232
EciI GGCGGA 1 cut(s) 106
Esp3I CGTCTC 1 cut(s) 115
FaeI CATG 1 cut(s) 169
FaiI YATR 1 cut(s) 167
FatI CATG 1 cut(s) 165
FauI CCCGC 1 cut(s) 233
FbaI TGATCA 1 cut(s) 232
Fnu4HI GCNGC 1 cut(s) 192
FokI GGATG 1 cut(s) 49
Fsp4HI GCNGC 1 cut(s) 192
GlaI GCGC 1 cut(s) 103
GluI GCNGC 1 cut(s) 192
GsaI CCCAGC 1 cut(s) 58
HaeII RGCGCY 1 cut(s) 105
HaeIII GGCC 2 cut(s) 45, 191
HgaI GACGC 1 cut(s) 139
HhaI GCGC 1 cut(s) 104
Hin1II CATG 1 cut(s) 169
Hin6I GCGC 1 cut(s) 102
HinP1I GCGC 1 cut(s) 102
HphI GGTGA 2 cut(s) 205, 214
Hpy188I TCNGA 2 cut(s) 232, 284
Hpy188III TCNNGA 1 cut(s) 136
Hpy99I CGWCG 1 cut(s) 179
HpyAV CCTTC 1 cut(s) 130
HpyCH4III ACNGT 1 cut(s) 109
HpyCH4V TGCA 2 cut(s) 94, 257
HpyF10VI GCNNNNNNNGC 1 cut(s) 147
HpyF3I CTNAG 1 cut(s) 270
Hsp92II CATG 1 cut(s) 169
HspAI GCGC 1 cut(s) 102
Ksp22I TGATCA 1 cut(s) 232
Kzo9I GATC 2 cut(s) 3, 232
LpnPI CCDG 2 cut(s) 51, 68
MalI GATC 2 cut(s) 5, 234
MbiI CCGCTC 1 cut(s) 228
MboI GATC 2 cut(s) 3, 232
MboII GAAGA 1 cut(s) 120
MnlI CCTC 6 cut(s) 28, 57, 124, 143, 181, 213
MslI CAYNNNNRTG 1 cut(s) 252
MwoI GCNNNNNNNGC 1 cut(s) 147
NdeII GATC 2 cut(s) 3, 232
NlaIII CATG 1 cut(s) 169
PcsI WCGNNNNNNNCGW 1 cut(s) 183
PkrI GCNGC 1 cut(s) 193
PspFI CCCAGC 1 cut(s) 54
PspPI GGNCC 1 cut(s) 44
RseI CAYNNNNRTG 1 cut(s) 252
SatI GCNGC 1 cut(s) 192
Sau3AI GATC 2 cut(s) 3, 232
Sau96I GGNCC 1 cut(s) 44
SetI ASST 2 cut(s) 60, 143
SmiMI CAYNNNNRTG 1 cut(s) 252
SmlI CTYRAG 1 cut(s) 134
SmoI CTYRAG 1 cut(s) 134
SsiI CCGC 5 cut(s) 34, 117, 192, 199, 226
TaaI ACNGT 1 cut(s) 109
TaqI TCGA 1 cut(s) 62
TauI GCSGC 1 cut(s) 194
TspDTI ATGAA 1 cut(s) 182
XcmI CCANNNNNNNNNTGG 1 cut(s) 62
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.