ion channel POLLUX-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Castor_Poll_mid | PF06241 | 411 - 502 | 1.3e-34 | Castor and Pollux, part of voltage-gated ion channel |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1283, 1610 |
| Acc65I | GGTACC | 1 cut(s) | 875 |
| AccB1I | GGYRCC | 2 cut(s) | 875, 1296 |
| AccI | GTMKAC | 1 cut(s) | 2076 |
| AccII | CGCG | 2 cut(s) | 80, 1048 |
| AciI | CCGC | 6 cut(s) | 281, 868, 879, 1035, 1998, 2343 |
| AclWI | GGATC | 4 cut(s) | 1144, 1648, 1959, 1967 |
| AcsI | RAATTY | 2 cut(s) | 557, 1429 |
| AfaI | GTAC | 5 cut(s) | 877, 956, 1187, 1551, 2255 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 122, 888, 1073, 2395 |
| AflII | CTTAAG | 1 cut(s) | 632 |
| AjiI | CACGTC | 1 cut(s) | 1268 |
| AjnI | CCWGG | 4 cut(s) | 145, 599, 1386, 1738 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 645, 677 |
| Alw21I | GWGCWC | 2 cut(s) | 1458, 2292 |
| Alw26I | GTCTC | 6 cut(s) | 114, 174, 409, 1689, 2156, 2427 |
| AlwI | GGATC | 4 cut(s) | 1144, 1648, 1959, 1967 |
| AoxI | GGCC | 2 cut(s) | 1119, 1405 |
| ApeKI | GCWGC | 3 cut(s) | 1031, 1335, 2132 |
| ApoI | RAATTY | 2 cut(s) | 557, 1429 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 292, 324, 1239, 1271 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 215, 729 |
| Asp718I | GGTACC | 1 cut(s) | 875 |
| AspLEI | GCGC | 3 cut(s) | 298, 505, 1048 |
| AspS9I | GGNCC | 4 cut(s) | 150, 1120, 1658, 1736 |
| AsuHPI | GGTGA | 4 cut(s) | 268, 1088, 1808, 2234 |
| AsuNHI | GCTAGC | 1 cut(s) | 943 |
| AvaII | GGWCC | 3 cut(s) | 150, 1658, 1736 |
| BaeGI | GKGCMC | 1 cut(s) | 766 |
| BanI | GGYRCC | 2 cut(s) | 875, 1296 |
| BanII | GRGCYC | 2 cut(s) | 1458, 2292 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1107, 1139 |
| BbsI | GAAGAC | 3 cut(s) | 186, 233, 588 |
| Bbv12I | GWGCWC | 2 cut(s) | 1458, 2292 |
| BbvCI | CCTCAGC | 1 cut(s) | 948 |
| BbvI | GCAGC | 3 cut(s) | 1018, 1347, 2144 |
| BccI | CCATC | 7 cut(s) | 426, 928, 1135, 1412, 1943, 1984, 2213 |
| BceAI | ACGGC | 3 cut(s) | 175, 1610, 2098 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 504, 538 |
| BciT130I | CCWGG | 4 cut(s) | 147, 601, 1388, 1740 |
| BclI | TGATCA | 2 cut(s) | 787, 2355 |
| BcoDI | GTCTC | 6 cut(s) | 114, 174, 409, 1689, 2156, 2427 |
| BfmI | CTRYAG | 1 cut(s) | 1291 |
| BfoI | RGCGCY | 1 cut(s) | 506 |
| BfrI | CTTAAG | 1 cut(s) | 632 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1043 |
| BglII | AGATCT | 1 cut(s) | 1287 |
| BisI | GCNGC | 4 cut(s) | 1032, 1035, 1336, 2133 |
| BlsI | GCNGC | 4 cut(s) | 1033, 1036, 1337, 2134 |
| Bme1390I | CCNGG | 4 cut(s) | 147, 601, 1388, 1740 |
| Bme18I | GGWCC | 3 cut(s) | 150, 1658, 1736 |
| BmgBI | CACGTC | 1 cut(s) | 1268 |
| BmgT120I | GGNCC | 4 cut(s) | 150, 1120, 1658, 1736 |
| BmiI | GGNNCC | 7 cut(s) | 151, 877, 1224, 1298, 1385, 1660, 2367 |
| BmrFI | CCNGG | 4 cut(s) | 147, 601, 1388, 1740 |
| BmrI | ACTGGG | 1 cut(s) | 1388 |
| BmsI | GCATC | 6 cut(s) | 131, 254, 276, 377, 759, 2034 |
| BmtI | GCTAGC | 1 cut(s) | 947 |
| BmuI | ACTGGG | 1 cut(s) | 1388 |
| BpiI | GAAGAC | 3 cut(s) | 186, 233, 588 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 941, 973 |
| Bpu10I | CCTNAGC | 3 cut(s) | 871, 948, 2309 |
| BpuEI | CTTGAG | 6 cut(s) | 118, 377, 494, 1181, 1556, 2093 |
| Bsa29I | ATCGAT | 2 cut(s) | 73, 1148 |
| BsaAI | YACGTR | 2 cut(s) | 1185, 2236 |
| BsaBI | GATNNNNATC | 2 cut(s) | 969, 1728 |
| BsaI | GGTCTC | 1 cut(s) | 2427 |
| BsaJI | CCNNGG | 4 cut(s) | 145, 146, 600, 923 |
| BsaWI | WCCGGW | 1 cut(s) | 2362 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 85, 115, 1686, 1716, 2034, 2064 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 122, 888, 1073, 2395 |
| Bse118I | RCCGGY | 1 cut(s) | 1225 |
| Bse1I | ACTGG | 2 cut(s) | 1383, 1964 |
| Bse8I | GATNNNNATC | 2 cut(s) | 969, 1728 |
| BseBI | CCWGG | 4 cut(s) | 147, 601, 1388, 1740 |
| BseCI | ATCGAT | 2 cut(s) | 73, 1148 |
| BseDI | CCNNGG | 4 cut(s) | 145, 146, 600, 923 |
| BseGI | GGATG | 8 cut(s) | 267, 269, 406, 981, 1771, 1827, 1935, 2404 |
| BseJI | GATNNNNATC | 2 cut(s) | 969, 1728 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 122, 888, 1073, 2395 |
| BseMII | CTCAG | 7 cut(s) | 177, 182, 351, 743, 939, 2277, 2307 |
| BseNI | ACTGG | 2 cut(s) | 1383, 1964 |
| BseRI | GAGGAG | 3 cut(s) | 378, 1730, 2003 |
| BseSI | GKGCMC | 1 cut(s) | 766 |
| BseXI | GCAGC | 3 cut(s) | 1018, 1347, 2144 |
| Bsh1236I | CGCG | 2 cut(s) | 80, 1048 |
| BshFI | GGCC | 2 cut(s) | 1121, 1407 |
| BshNI | GGYRCC | 2 cut(s) | 875, 1296 |
| BshVI | ATCGAT | 2 cut(s) | 73, 1148 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1458, 2292 |
| BsiSI | CCGG | 2 cut(s) | 1226, 2363 |
| BsiWI | CGTACG | 1 cut(s) | 1185 |
| BslFI | GGGAC | 4 cut(s) | 163, 555, 1369, 2101 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 122, 888, 1073, 2395 |
| BsmAI | GTCTC | 6 cut(s) | 114, 174, 409, 1689, 2156, 2427 |
| BsmBI | CGTCTC | 1 cut(s) | 1689 |
| BsmFI | GGGAC | 4 cut(s) | 163, 555, 1369, 2101 |
| BsnI | GGCC | 2 cut(s) | 1121, 1407 |
| Bso31I | GGTCTC | 1 cut(s) | 2427 |
| Bsp1286I | GDGCHC | 3 cut(s) | 766, 1458, 2292 |
| Bsp1407I | TGTACA | 1 cut(s) | 2253 |
| BspACI | CCGC | 6 cut(s) | 281, 868, 879, 1035, 1998, 2343 |
| BspANI | GGCC | 2 cut(s) | 1121, 1407 |
| BspCNI | CTCAG | 7 cut(s) | 178, 181, 350, 744, 940, 2278, 2306 |
| BspDI | ATCGAT | 2 cut(s) | 73, 1148 |
| BspFNI | CGCG | 2 cut(s) | 80, 1048 |
| BspHI | TCATGA | 2 cut(s) | 507, 853 |
| BspLI | GGNNCC | 7 cut(s) | 151, 877, 1224, 1298, 1385, 1660, 2367 |
| BspOI | GCTAGC | 1 cut(s) | 947 |
| BspPI | GGATC | 4 cut(s) | 1144, 1648, 1959, 1967 |
| BspQI | GCTCTTC | 1 cut(s) | 1446 |
| BspT107I | GGYRCC | 2 cut(s) | 875, 1296 |
| BspTI | CTTAAG | 1 cut(s) | 632 |
| BspTNI | GGTCTC | 1 cut(s) | 2427 |
| BsrFI | RCCGGY | 1 cut(s) | 1225 |
| BsrGI | TGTACA | 1 cut(s) | 2253 |
| BsrI | ACTGG | 2 cut(s) | 1383, 1964 |
| BssAI | RCCGGY | 1 cut(s) | 1225 |
| BssECI | CCNNGG | 4 cut(s) | 145, 146, 600, 923 |
| BssT1I | CCWWGG | 1 cut(s) | 923 |
| Bst2UI | CCWGG | 4 cut(s) | 147, 601, 1388, 1740 |
| Bst4CI | ACNGT | 5 cut(s) | 276, 815, 848, 1549, 2253 |
| Bst6I | CTCTTC | 3 cut(s) | 625, 1446, 2013 |
| BstAFI | CTTAAG | 1 cut(s) | 632 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2168 |
| BstAUI | TGTACA | 1 cut(s) | 2253 |
| BstBAI | YACGTR | 2 cut(s) | 1185, 2236 |
| BstC8I | GCNNGC | 8 cut(s) | 349, 353, 607, 861, 945, 1050, 2093, 2301 |
| BstF5I | GGATG | 8 cut(s) | 267, 269, 406, 981, 1771, 1827, 1935, 2404 |
| BstFNI | CGCG | 2 cut(s) | 80, 1048 |
| BstH2I | RGCGCY | 1 cut(s) | 506 |
| BstHHI | GCGC | 3 cut(s) | 298, 505, 1048 |
| BstMAI | GTCTC | 6 cut(s) | 114, 174, 409, 1689, 2156, 2427 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 1043, 2168, 2296, 2305 |
| BstNI | CCWGG | 4 cut(s) | 147, 601, 1388, 1740 |
| BstNSI | RCATGY | 3 cut(s) | 519, 609, 863 |
| BstSCI | CCNGG | 4 cut(s) | 145, 599, 1386, 1738 |
| BstSFI | CTRYAG | 1 cut(s) | 1291 |
| BstSLI | GKGCMC | 1 cut(s) | 766 |
| BstSNI | TACGTA | 2 cut(s) | 1185, 2236 |
| BstUI | CGCG | 2 cut(s) | 80, 1048 |
| BstV1I | GCAGC | 3 cut(s) | 1018, 1347, 2144 |
| BstV2I | GAAGAC | 3 cut(s) | 186, 233, 588 |
| BstX2I | RGATCY | 2 cut(s) | 1287, 1972 |
| BstYI | RGATCY | 2 cut(s) | 1287, 1972 |
| Bsu15I | ATCGAT | 2 cut(s) | 73, 1148 |
| BsuRI | GGCC | 2 cut(s) | 1121, 1407 |
| BsuTUI | ATCGAT | 2 cut(s) | 73, 1148 |
| BtrI | CACGTC | 1 cut(s) | 1268 |
| BtsCI | GGATG | 8 cut(s) | 267, 269, 406, 981, 1771, 1827, 1935, 2404 |
| BtsIMutI | CAGTG | 4 cut(s) | 183, 272, 345, 2283 |
| Cac8I | GCNNGC | 8 cut(s) | 349, 353, 607, 861, 945, 1050, 2093, 2301 |
| CciI | TCATGA | 2 cut(s) | 507, 853 |
| CfoI | GCGC | 3 cut(s) | 298, 505, 1048 |
| Cfr10I | RCCGGY | 1 cut(s) | 1225 |
| Cfr13I | GGNCC | 4 cut(s) | 150, 1120, 1658, 1736 |
| ClaI | ATCGAT | 2 cut(s) | 73, 1148 |
| CseI | GACGC | 4 cut(s) | 69, 1109, 1604, 2222 |
| Csp6I | GTAC | 5 cut(s) | 876, 955, 1186, 1550, 2254 |
| CviAII | CATG | 9 cut(s) | 508, 516, 606, 854, 860, 910, 1459, 1528, 2257 |
| CviQI | GTAC | 5 cut(s) | 876, 955, 1186, 1550, 2254 |
| DraI | TTTAAA | 1 cut(s) | 105 |
| Eam1104I | CTCTTC | 3 cut(s) | 625, 1446, 2013 |
| EarI | CTCTTC | 3 cut(s) | 625, 1446, 2013 |
| Ecl136II | GAGCTC | 2 cut(s) | 1456, 2290 |
| Eco105I | TACGTA | 2 cut(s) | 1185, 2236 |
| Eco130I | CCWWGG | 1 cut(s) | 923 |
| Eco24I | GRGCYC | 2 cut(s) | 1458, 2292 |
| Eco31I | GGTCTC | 1 cut(s) | 2427 |
| Eco32I | GATATC | 1 cut(s) | 427 |
| Eco47I | GGWCC | 3 cut(s) | 150, 1658, 1736 |
| Eco53kI | GAGCTC | 2 cut(s) | 1456, 2290 |
| EcoICRI | GAGCTC | 2 cut(s) | 1456, 2290 |
| EcoO109I | RGGNCCY | 2 cut(s) | 150, 1658 |
| EcoRII | CCWGG | 4 cut(s) | 145, 599, 1386, 1738 |
| EcoRV | GATATC | 1 cut(s) | 427 |
| EcoT14I | CCWWGG | 1 cut(s) | 923 |
| EcoT22I | ATGCAT | 1 cut(s) | 269 |
| EcoT38I | GRGCYC | 2 cut(s) | 1458, 2292 |
| ErhI | CCWWGG | 1 cut(s) | 923 |
| Esp3I | CGTCTC | 1 cut(s) | 1689 |
| FaeI | CATG | 9 cut(s) | 511, 519, 609, 857, 863, 913, 1462, 1531, 2260 |
| FaqI | GGGAC | 4 cut(s) | 163, 555, 1369, 2101 |
| FatI | CATG | 9 cut(s) | 507, 515, 605, 853, 859, 909, 1458, 1527, 2256 |
| FbaI | TGATCA | 2 cut(s) | 787, 2355 |
| FblI | GTMKAC | 1 cut(s) | 2076 |
| Fnu4HI | GCNGC | 4 cut(s) | 1032, 1035, 1336, 2133 |
| FokI | GGATG | 8 cut(s) | 254, 276, 413, 968, 1778, 1814, 1922, 2411 |
| FriOI | GRGCYC | 2 cut(s) | 1458, 2292 |
| Fsp4HI | GCNGC | 4 cut(s) | 1032, 1035, 1336, 2133 |
| GlaI | GCGC | 3 cut(s) | 297, 504, 1047 |
| GluI | GCNGC | 4 cut(s) | 1032, 1035, 1336, 2133 |
| HaeII | RGCGCY | 1 cut(s) | 506 |
| HaeIII | GGCC | 2 cut(s) | 1121, 1407 |
| HapII | CCGG | 2 cut(s) | 1226, 2363 |
| HgaI | GACGC | 4 cut(s) | 69, 1109, 1604, 2222 |
| HhaI | GCGC | 3 cut(s) | 298, 505, 1048 |
| Hin1II | CATG | 9 cut(s) | 511, 519, 609, 857, 863, 913, 1462, 1531, 2260 |
| Hin6I | GCGC | 3 cut(s) | 296, 503, 1046 |
| HinP1I | GCGC | 3 cut(s) | 296, 503, 1046 |
| HincII | GTYRAC | 2 cut(s) | 205, 2077 |
| HindII | GTYRAC | 2 cut(s) | 205, 2077 |
| HindIII | AAGCTT | 1 cut(s) | 2036 |
| HpaII | CCGG | 2 cut(s) | 1226, 2363 |
| HphI | GGTGA | 4 cut(s) | 268, 1088, 1808, 2234 |
| Hpy166II | GTNNAC | 3 cut(s) | 24, 205, 2077 |
| Hpy8I | GTNNAC | 3 cut(s) | 24, 205, 2077 |
| Hpy99I | CGWCG | 1 cut(s) | 2078 |
| HpyAV | CCTTC | 9 cut(s) | 60, 163, 423, 752, 1133, 1782, 2194, 2286, 2423 |
| HpyCH4III | ACNGT | 5 cut(s) | 276, 815, 848, 1549, 2253 |
| HpyCH4IV | ACGT | 7 cut(s) | 491, 1184, 1241, 1267, 1698, 2235, 2244 |
| HpyCH4V | TGCA | 9 cut(s) | 232, 267, 368, 443, 772, 1335, 1705, 2031, 2053 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 1043, 2168, 2296, 2305 |
| HpySE526I | ACGT | 7 cut(s) | 491, 1184, 1241, 1267, 1698, 2235, 2244 |
| Hsp92II | CATG | 9 cut(s) | 511, 519, 609, 857, 863, 913, 1462, 1531, 2260 |
| HspAI | GCGC | 3 cut(s) | 296, 503, 1046 |
| KpnI | GGTACC | 1 cut(s) | 879 |
| Ksp22I | TGATCA | 2 cut(s) | 787, 2355 |
| LguI | GCTCTTC | 1 cut(s) | 1446 |
| LmnI | GCTCC | 2 cut(s) | 93, 1222 |
| Lsp1109I | GCAGC | 3 cut(s) | 1018, 1347, 2144 |
| LweI | GCATC | 6 cut(s) | 131, 254, 276, 377, 759, 2034 |
| MaeII | ACGT | 7 cut(s) | 491, 1184, 1241, 1267, 1698, 2235, 2244 |
| MaeIII | GTNAC | 3 cut(s) | 1237, 1955, 2155 |
| MfeI | CAATTG | 1 cut(s) | 1495 |
| MflI | RGATCY | 2 cut(s) | 1287, 1972 |
| MhlI | GDGCHC | 3 cut(s) | 766, 1458, 2292 |
| MluCI | AATT | 7 cut(s) | 557, 728, 1247, 1306, 1429, 1495, 1861 |
| MlyI | GAGTC | 7 cut(s) | 247, 537, 666, 2072, 2100, 2158, 2396 |
| MmeI | TCCRAC | 1 cut(s) | 378 |
| Mph1103I | ATGCAT | 1 cut(s) | 269 |
| MroXI | GAANNNNTTC | 2 cut(s) | 215, 729 |
| MslI | CAYNNNNRTG | 2 cut(s) | 858, 1440 |
| MspCI | CTTAAG | 1 cut(s) | 632 |
| MspI | CCGG | 2 cut(s) | 1226, 2363 |
| MspR9I | CCNGG | 4 cut(s) | 147, 601, 1388, 1740 |
| MunI | CAATTG | 1 cut(s) | 1495 |
| MvaI | CCWGG | 4 cut(s) | 147, 601, 1388, 1740 |
| MvnI | CGCG | 2 cut(s) | 80, 1048 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 1043, 2168, 2296, 2305 |
| NheI | GCTAGC | 1 cut(s) | 943 |
| NlaIII | CATG | 9 cut(s) | 511, 519, 609, 857, 863, 913, 1462, 1531, 2260 |
| NlaIV | GGNNCC | 7 cut(s) | 151, 877, 1224, 1298, 1385, 1660, 2367 |
| NmeAIII | GCCGAG | 2 cut(s) | 682, 2067 |
| NmuCI | GTSAC | 1 cut(s) | 1955 |
| NsiI | ATGCAT | 1 cut(s) | 269 |
| NspI | RCATGY | 3 cut(s) | 519, 609, 863 |
| PaeI | GCATGC | 2 cut(s) | 609, 863 |
| PagI | TCATGA | 2 cut(s) | 507, 853 |
| PasI | CCCWGGG | 1 cut(s) | 146 |
| PciSI | GCTCTTC | 1 cut(s) | 1446 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 1769, 2241 |
| PdmI | GAANNNNTTC | 2 cut(s) | 215, 729 |
| PfeI | GAWTC | 5 cut(s) | 75, 1145, 1646, 1667, 1852 |
| Pfl23II | CGTACG | 1 cut(s) | 1185 |
| PfoI | TCCNGGA | 1 cut(s) | 1386 |
| PkrI | GCNGC | 4 cut(s) | 1033, 1036, 1337, 2134 |
| PleI | GAGTC | 7 cut(s) | 246, 537, 665, 2072, 2100, 2157, 2396 |
| PpsI | GAGTC | 7 cut(s) | 246, 537, 665, 2072, 2100, 2157, 2396 |
| Ppu21I | YACGTR | 2 cut(s) | 1185, 2236 |
| PpuMI | RGGWCCY | 2 cut(s) | 150, 1658 |
| PsiI | TTATAA | 2 cut(s) | 1283, 1610 |
| Psp124BI | GAGCTC | 2 cut(s) | 1458, 2292 |
| Psp5II | RGGWCCY | 2 cut(s) | 150, 1658 |
| Psp6I | CCWGG | 4 cut(s) | 145, 599, 1386, 1738 |
| PspGI | CCWGG | 4 cut(s) | 145, 599, 1386, 1738 |
| PspLI | CGTACG | 1 cut(s) | 1185 |
| PspN4I | GGNNCC | 7 cut(s) | 151, 877, 1224, 1298, 1385, 1660, 2367 |
| PspPI | GGNCC | 4 cut(s) | 150, 1120, 1658, 1736 |
| PspPPI | RGGWCCY | 2 cut(s) | 150, 1658 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 269, 301 |
| PsuI | RGATCY | 2 cut(s) | 1287, 1972 |
| RsaI | GTAC | 5 cut(s) | 877, 956, 1187, 1551, 2255 |
| RsaNI | GTAC | 5 cut(s) | 876, 955, 1186, 1550, 2254 |
| RseI | CAYNNNNRTG | 2 cut(s) | 858, 1440 |
| SacI | GAGCTC | 2 cut(s) | 1458, 2292 |
| SalI | GTCGAC | 1 cut(s) | 2075 |
| SapI | GCTCTTC | 1 cut(s) | 1446 |
| SatI | GCNGC | 4 cut(s) | 1032, 1035, 1336, 2133 |
| Sau96I | GGNCC | 4 cut(s) | 150, 1120, 1658, 1736 |
| SchI | GAGTC | 7 cut(s) | 247, 537, 666, 2072, 2100, 2158, 2396 |
| ScrFI | CCNGG | 4 cut(s) | 147, 601, 1388, 1740 |
| SduI | GDGCHC | 3 cut(s) | 766, 1458, 2292 |
| SfaNI | GCATC | 6 cut(s) | 131, 254, 276, 377, 759, 2034 |
| SfcI | CTRYAG | 1 cut(s) | 1291 |
| SinI | GGWCC | 3 cut(s) | 150, 1658, 1736 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 858, 1440 |
| SmlI | CTYRAG | 7 cut(s) | 97, 392, 473, 632, 1196, 1535, 2108 |
| SmoI | CTYRAG | 7 cut(s) | 97, 392, 473, 632, 1196, 1535, 2108 |
| SnaBI | TACGTA | 2 cut(s) | 1185, 2236 |
| SphI | GCATGC | 2 cut(s) | 609, 863 |
| Sse9I | AATT | 7 cut(s) | 557, 728, 1247, 1306, 1429, 1495, 1861 |
| SsiI | CCGC | 6 cut(s) | 281, 868, 879, 1035, 1998, 2343 |
| SspI | AATATT | 4 cut(s) | 466, 690, 1758, 1924 |
| SstI | GAGCTC | 2 cut(s) | 1458, 2292 |
| StyD4I | CCNGG | 4 cut(s) | 145, 599, 1386, 1738 |
| StyI | CCWWGG | 1 cut(s) | 923 |
| TaaI | ACNGT | 5 cut(s) | 276, 815, 848, 1549, 2253 |
| TaiI | ACGT | 7 cut(s) | 494, 1187, 1244, 1270, 1701, 2238, 2247 |
| TaqI | TCGA | 6 cut(s) | 73, 371, 1148, 1601, 2076, 2391 |
| TasI | AATT | 7 cut(s) | 557, 728, 1247, 1306, 1429, 1495, 1861 |
| TatI | WGTACW | 1 cut(s) | 2253 |
| TauI | GCSGC | 1 cut(s) | 1037 |
| TfiI | GAWTC | 5 cut(s) | 75, 1145, 1646, 1667, 1852 |
| TscAI | CASTG | 4 cut(s) | 190, 279, 345, 2290 |
| TseFI | GTSAC | 1 cut(s) | 1955 |
| TseI | GCWGC | 3 cut(s) | 1031, 1335, 2132 |
| Tsp45I | GTSAC | 1 cut(s) | 1955 |
| TspDTI | ATGAA | 8 cut(s) | 817, 1101, 1544, 1910, 2116, 2268, 2273, 2391 |
| TspGWI | ACGGA | 2 cut(s) | 234, 1639 |
| TspRI | CASTG | 4 cut(s) | 190, 279, 345, 2290 |
| Vha464I | CTTAAG | 1 cut(s) | 632 |
| VpaK11BI | GGWCC | 3 cut(s) | 150, 1658, 1736 |
| XapI | RAATTY | 2 cut(s) | 557, 1429 |
| XbaI | TCTAGA | 2 cut(s) | 1979, 2209 |
| XceI | RCATGY | 3 cut(s) | 519, 609, 863 |
| XmiI | GTMKAC | 1 cut(s) | 2076 |
| XmnI | GAANNNNTTC | 2 cut(s) | 215, 729 |
| Zsp2I | ATGCAT | 1 cut(s) | 269 |