Rroxscaffold_5G00335520

ion channel POLLUX-like

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
Physical Location & Seq
Forward (+)
2936408 .. 2945100
8693 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00335520.1

Sequence Viewer

Length: 2697 bp
ATGGTTGTGAGTCAGTTGCAGCTATGCGTTTTGCCACACCGGTTTCCGAGACTCAATCCCTCTCCTTCTTCTCCAAAGAGATCCATACTGAATTCAAGTTCCCAACGTTTTTGTCAGAATGACTCTGAAATAGTACTAGTTTCTGTAACAGAGGCAAAAGTTCACTTTGCAATGCAATTGCTGATGTCGAAATATATGCCCTGCCAGTTCTGGTGTATCCAATCATCTTTACACGGGCGTAATTTCATAACTCCAAACAGAGGAAAAGGCAAGGTCAGGTCTCAAAAGACAGGCGATAGACTAGATTCCACCATGTACATAAATGTTGAAGCTGATTCTGACACTGAACTCCTTAGGATAGAACAAGTGAAACGTTCTCAGATTAACCAGGCTAAATTCTTGATGGGATTGACGTGCTTATATATTCCACTTAGACTGGCAAAGCTAAATGTTGTTGTTACTTTCATTAACATCGTCCAAGAAAGACTTATCTGTGCTGTCCAAACTTTAGAGGCCGCCACGTTGCCTTTTGCCTGTGCTTCTAATTCTCTGAATAAGCCCAAGCCTCTTGGATTGGATGTGTTGTTGCAATCATTTCAAGATGTTAGATGGAGATTTGATCGATTGTTGTATCTTTTTAACGTCCAACTTGAGAAAAACGTTGCCACGTACTTCATAGTGCTCCTGGTAGCATGTGTCTCATTTGTTATCACTGGTGGTTTCCTATATTTCAAGTTTAGGGATAGTAAAGAATCTTTGGAGGACTGCTTCTGGGAAGCTTGGGCATGCCTATGTTCACCTCACACACATCTAAAGCAAAGAACACGTGTTGAACGTGTTATTGGTTTCGTTCTTGCTATATGGGGCATATTATTTTACTCCCGCTTATTGAGCACAATGACTGAACAGTTCCGGAGTAATATGTACAAGCTCAGAGAAGGGGCACAAATGCAAGTTCTGGAGACTGATCACATCATTATTTGTGGAGTGAACAGTCATCTTCCTTTCATACTAAAGCAAATAAATAAGTATCATGAAGTTGCTGTCCGCTTAGGTACTGCTACAGTTAGGCAGCAAAGAATTCTTCTTATGTCTGATCTACCAAGAGAGCAGATGCACAAAAAAGTTGACGATATTGCCAAAGATTTTAACCATATCGATATCCTTACAAAAAGTTGTAGCCTGAGCTTAACAAAATCATATGAAAGAGCTGCTGCCAACAAGGCACGTGCCATAATTATACTGCCAAAAAAGGCAGATCGGTATGAAGTTGACACTGATGCTTTTCTATCCGTTCTGGCTCTTCAACCTATTCCTAGGATGGAATCCGTCCCCACTATTGTTGAGGTTTCAAGTTCAAAGACATGCGAGCTTTTGAAGTCAATCTCAGGGTTGAAAGTAGAGCCTGTGGAGAACGTTGCATCCAAGTTATTTGTTCAATGCTCTCGTCAACAAGGACTCATAAAGATCTACAGACACTTGCTTAATTATCGAAAAAATGTGTTCAATCTTTGCAATTCTCCCAGGCTAGCAGGGCTGAAGTATAGTCAATTAGGACCTAGGTTTCAAGAGGCAGTTGTTTGTGGGCTTTATAGAAATGGGAAGATATACTTCCACCCAAATGATGATGAGATCTTGCAGGAAACTGACAAAGTATTGTTCATTTCACCTATTAATGGGGGTAAGAAGCCTCCCATTACTAATTCAAATGTTAAAGAAATAAGCGATGCCAATCAAAGTTTGGAAGATGTAGAAAAGGACAGTGATACTCAATCACATGCCTTAAAATTAAGGAAAGAAAATACACGTCCCAAGAGAAGAGGCTCCAAGGCATCAGACGGGACTCTAGGACCAACAGAATTTATACTTCTTCTTGGATGGCGGCCAGACGTTGTTGAGATGATTGAAGAATATGACAATTATCTCGGACCTGGGAGTGTCGTGGAGATATTATCAGATGCACCTTTAGATGACAGAAATAAGGCAAGAAGAGGTGCCGGTCAAGCCAAACTAAAACATGTGCGGGTTTCACATAGGATTGGAAACCCGATGAACTTTGACACTTTACAAGAAACCATAAGCAATATCCAACATTCTTTGAAGAATGAAGATATTCCCTTATCCATTGTTGTAATATCCGATAGAGAATGGCTTCTTGGAGATCCAAACAGGGCAGACAAGCAATCCGCCTTTTCCCTTCTTCTTGCTGAAAATATTTGCAACAAACTTGGCGTAAAGAGTCTTTATATTCACATGGAGAAAAGAAAGGAACTGACAAGGTGGTCATTTCAGGTGCAGAATCTAGTTACAGAGATTGTGGACTCGAAATTGGGGAAACAAATCACAAGAATAAAGCCATCGCTTACTTATATTGCTGCGGAGGAAGTAATGAGCCTCGTAACAGCTCAAGTCGCTGTGGAAAGTGAACTAAATGAGGTGTGGAAAGACATTCTGAATGCAGAAGGTGATGAAATATATGTGAAGGATATCAGACTCTATATGAAAGAAGGAGAGACTCCATCCTTCACGGAGCTTGCTGAAAGAGCTCATTTACGGAAGGAAGTTGCCATAGGTTATGTGAAAAACAATAAGAAGGTTATTAATCCAGTTCCCAAGTCAGAACCCCTCTCCCTTGAGTTGACAGATTCGTTAATAGTTATATCTGAAGTTGAAGGAGAACAACCGATCGTTTTGTAG

Protein Analysis

898

Amino Acids

102.02

Weight (kDa)

8.89

Isoelectric Point (pI)

45.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Castor_Poll_mid PF06241 471 - 569 2.4e-38 Castor and Pollux, part of voltage-gated ion channel
Castor_Poll_mid PF06241 794 - 893 8.5e-06 Castor and Pollux, part of voltage-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2281
AccB1I GGYRCC 1 cut(s) 1994
AccIII TCCGGA 1 cut(s) 912
AciI CCGC 7 cut(s) 516, 883, 1048, 1882, 2023, 2187, 2378
AclI AACGTT 4 cut(s) 106, 373, 660, 1416
AclWI GGATC 2 cut(s) 75, 2156
AcoI YGGCCR 1 cut(s) 1883
AcsI RAATTY 4 cut(s) 91, 395, 1080, 1859
AcuI CTGAAG 2 cut(s) 1559, 2685
AcvI CACGTG 2 cut(s) 827, 1229
AfaI GTAC 5 cut(s) 135, 317, 671, 926, 1057
AfiI CCNNNNNNNGG 2 cut(s) 260, 1676
AflIII ACRYGT 5 cut(s) 824, 826, 835, 1805, 2017
AgeI ACCGGT 1 cut(s) 39
AhlI ACTAGT 1 cut(s) 136
AjiI CACGTC 2 cut(s) 414, 1808
AjnI CCWGG 4 cut(s) 387, 684, 1523, 1930
AjuI GAANNNNNNNTTGG 4 cut(s) 825, 857, 2139, 2171
AloI GAACNNNNNNTCC 2 cut(s) 1406, 1438
Alw21I GWGCWC 3 cut(s) 684, 896, 2548
Alw26I GTCTC 5 cut(s) 43, 285, 703, 956, 2507
AlwI GGATC 2 cut(s) 75, 2156
Aor13HI TCCGGA 1 cut(s) 912
AoxI GGCC 2 cut(s) 513, 1883
ApeKI GCWGC 5 cut(s) 19, 1072, 1211, 1214, 2375
ApoI RAATTY 4 cut(s) 91, 395, 1080, 1859
AseI ATTAAT 2 cut(s) 1674, 2601
AsiGI ACCGGT 1 cut(s) 39
Asp700I GAANNNNTTC 2 cut(s) 2112, 2151
AspA2I CCTAGG 2 cut(s) 1316, 1559
AspS9I GGNCC 3 cut(s) 1556, 1850, 1928
AsuHPI GGTGA 3 cut(s) 789, 1659, 2477
AsuNHI GCTAGC 1 cut(s) 1528
AvaII GGWCC 3 cut(s) 1556, 1850, 1928
AvrII CCTAGG 2 cut(s) 1316, 1559
AxyI CCTNAGG 1 cut(s) 353
BaeGI GKGCMC 1 cut(s) 946
BanI GGYRCC 1 cut(s) 1994
BanII GRGCYC 1 cut(s) 2548
BbrPI CACGTG 2 cut(s) 827, 1229
Bbv12I GWGCWC 3 cut(s) 684, 896, 2548
BbvI GCAGC 5 cut(s) 31, 1084, 1198, 1201, 2362
BccI CCATC 6 cut(s) 397, 603, 1315, 1872, 2365, 2527
BcgI CGANNNNNNTGC 2 cut(s) 178, 212
BciT130I CCWGG 4 cut(s) 389, 686, 1525, 1932
BciVI GTATCC 1 cut(s) 227
BclI TGATCA 1 cut(s) 967
BcoDI GTCTC 5 cut(s) 43, 285, 703, 956, 2507
BcuI ACTAGT 1 cut(s) 136
BfaI CTAG 7 cut(s) 137, 302, 1317, 1529, 1560, 1847, 2303
BfmI CTRYAG 2 cut(s) 1062, 1471
BfuI GTATCC 1 cut(s) 227
BglI GCCNNNNNGGC 1 cut(s) 1223
BglII AGATCT 2 cut(s) 1467, 1632
BisI GCNGC 7 cut(s) 20, 516, 1073, 1212, 1215, 1883, 2376
BlnI CCTAGG 2 cut(s) 1316, 1559
BlsI GCNGC 7 cut(s) 21, 517, 1074, 1213, 1216, 1884, 2377
BmcAI AGTACT 1 cut(s) 135
Bme1390I CCNGG 4 cut(s) 389, 686, 1525, 1932
Bme18I GGWCC 3 cut(s) 1556, 1850, 1928
BmgBI CACGTC 2 cut(s) 414, 1808
BmgT120I GGNCC 3 cut(s) 1556, 1850, 1928
BmiI GGNNCC 2 cut(s) 1825, 1996
BmrFI CCNGG 4 cut(s) 389, 686, 1525, 1932
BmsI GCATC 6 cut(s) 1104, 1270, 1430, 1717, 1841, 1948
BmtI GCTAGC 1 cut(s) 1532
BpmI CTGGAG 1 cut(s) 980
Bpu10I CCTNAGC 2 cut(s) 1051, 1184
BpuEI CTTGAG 3 cut(s) 671, 2391, 2654
Bsa29I ATCGAT 2 cut(s) 622, 1158
BsaAI YACGTR 3 cut(s) 669, 827, 1229
BsaBI GATNNNNATC 1 cut(s) 1731
BsaI GGTCTC 1 cut(s) 285
BsaJI CCNNGG 5 cut(s) 1316, 1523, 1559, 1827, 1931
BsaWI WCCGGW 2 cut(s) 39, 912
Bsc4I CCNNNNNNNGG 2 cut(s) 260, 1676
Bse118I RCCGGY 2 cut(s) 39, 1997
Bse1I ACTGG 4 cut(s) 205, 441, 718, 2606
Bse21I CCTNAGG 1 cut(s) 353
Bse3DI GCAATG 1 cut(s) 177
Bse8I GATNNNNATC 1 cut(s) 1731
BseAI TCCGGA 1 cut(s) 912
BseBI CCWGG 4 cut(s) 389, 686, 1525, 1932
BseCI ATCGAT 2 cut(s) 622, 1158
BseDI CCNNGG 5 cut(s) 1316, 1523, 1559, 1827, 1931
BseGI GGATG 5 cut(s) 583, 1326, 1421, 1883, 2519
BseJI GATNNNNATC 1 cut(s) 1731
BseLI CCNNNNNNNGG 2 cut(s) 260, 1676
BseMI GCAATG 1 cut(s) 177
BseMII CTCAG 4 cut(s) 392, 946, 1175, 1401
BseNI ACTGG 4 cut(s) 205, 441, 718, 2606
BseSI GKGCMC 1 cut(s) 946
BseXI GCAGC 5 cut(s) 31, 1084, 1198, 1201, 2362
BsgI GTGCAG 1 cut(s) 2315
Bsh1285I CGRYCG 1 cut(s) 2688
BshFI GGCC 2 cut(s) 515, 1885
BshNI GGYRCC 1 cut(s) 1994
BshTI ACCGGT 1 cut(s) 39
BshVI ATCGAT 2 cut(s) 622, 1158
BsiEI CGRYCG 1 cut(s) 2688
BsiHKAI GWGCWC 3 cut(s) 684, 896, 2548
BsiSI CCGG 3 cut(s) 40, 913, 1998
BslFI GGGAC 3 cut(s) 1316, 1794, 1855
BslI CCNNNNNNNGG 2 cut(s) 260, 1676
BsmAI GTCTC 5 cut(s) 43, 285, 703, 956, 2507
BsmFI GGGAC 3 cut(s) 1316, 1794, 1855
BsmI GAATGC 1 cut(s) 2461
BsnI GGCC 2 cut(s) 515, 1885
Bso31I GGTCTC 1 cut(s) 285
Bsp1286I GDGCHC 4 cut(s) 684, 896, 946, 2548
Bsp13I TCCGGA 1 cut(s) 912
Bsp1407I TGTACA 2 cut(s) 315, 924
Bsp143I GATC 9 cut(s) 80, 619, 967, 1096, 1258, 1467, 1632, 2161, 2685
BspACI CCGC 7 cut(s) 516, 883, 1048, 1882, 2023, 2187, 2378
BspANI GGCC 2 cut(s) 515, 1885
BspCNI CTCAG 4 cut(s) 391, 945, 1176, 1400
BspDI ATCGAT 2 cut(s) 622, 1158
BspEI TCCGGA 1 cut(s) 912
BspHI TCATGA 1 cut(s) 1033
BspLI GGNNCC 2 cut(s) 1825, 1996
BspOI GCTAGC 1 cut(s) 1532
BspPI GGATC 2 cut(s) 75, 2156
BspQI GCTCTTC 1 cut(s) 1308
BspT107I GGYRCC 1 cut(s) 1994
BspTNI GGTCTC 1 cut(s) 285
BsrDI GCAATG 1 cut(s) 177
BsrFI RCCGGY 2 cut(s) 39, 1997
BsrGI TGTACA 2 cut(s) 315, 924
BsrI ACTGG 4 cut(s) 205, 441, 718, 2606
BssAI RCCGGY 2 cut(s) 39, 1997
BssECI CCNNGG 5 cut(s) 1316, 1523, 1559, 1827, 1931
BssMI GATC 9 cut(s) 80, 619, 967, 1096, 1258, 1467, 1632, 2161, 2685
BssT1I CCWWGG 3 cut(s) 1316, 1559, 1827
Bst2UI CCWGG 4 cut(s) 389, 686, 1525, 1932
Bst4CI ACNGT 4 cut(s) 909, 995, 1066, 1763
Bst6I CTCTTC 3 cut(s) 1308, 1813, 1984
BstAUI TGTACA 2 cut(s) 315, 924
BstBAI YACGTR 3 cut(s) 669, 827, 1229
BstC8I GCNNGC 4 cut(s) 787, 1370, 1530, 2535
BstDEI CTNAG 7 cut(s) 353, 378, 431, 932, 1051, 1184, 1387
BstF5I GGATG 5 cut(s) 583, 1326, 1421, 1883, 2519
BstKTI GATC 9 cut(s) 83, 622, 970, 1099, 1261, 1470, 1635, 2164, 2688
BstMAI GTCTC 5 cut(s) 43, 285, 703, 956, 2507
BstMBI GATC 9 cut(s) 80, 619, 967, 1096, 1258, 1467, 1632, 2161, 2685
BstMCI CGRYCG 1 cut(s) 2688
BstMWI GCNNNNNNNGC 6 cut(s) 891, 1223, 1534, 2003, 2411, 2543
BstNI CCWGG 4 cut(s) 389, 686, 1525, 1932
BstNSI RCATGY 5 cut(s) 696, 789, 1368, 1781, 2021
BstSCI CCNGG 4 cut(s) 387, 684, 1523, 1930
BstSFI CTRYAG 2 cut(s) 1062, 1471
BstSLI GKGCMC 1 cut(s) 946
BstV1I GCAGC 5 cut(s) 31, 1084, 1198, 1201, 2362
BstX2I RGATCY 4 cut(s) 80, 1467, 1632, 2161
BstYI RGATCY 4 cut(s) 80, 1467, 1632, 2161
Bsu15I ATCGAT 2 cut(s) 622, 1158
Bsu36I CCTNAGG 1 cut(s) 353
BsuI GTATCC 1 cut(s) 227
BsuRI GGCC 2 cut(s) 515, 1885
BsuTUI ATCGAT 2 cut(s) 622, 1158
BtgZI GCGATG 2 cut(s) 1740, 2343
BtrI CACGTC 2 cut(s) 414, 1808
BtsCI GGATG 5 cut(s) 583, 1326, 1421, 1883, 2519
BtsIMutI CAGTG 4 cut(s) 342, 711, 1275, 1768
Cac8I GCNNGC 4 cut(s) 787, 1370, 1530, 2535
CciI TCATGA 1 cut(s) 1033
Cfr10I RCCGGY 2 cut(s) 39, 1997
Cfr13I GGNCC 3 cut(s) 1556, 1850, 1928
ClaI ATCGAT 2 cut(s) 622, 1158
Csp6I GTAC 5 cut(s) 134, 316, 670, 925, 1056
CspAI ACCGGT 1 cut(s) 39
CspCI CAANNNNNGTGG 2 cut(s) 1324, 1359
CviAII CATG 8 cut(s) 313, 693, 786, 1034, 1365, 1778, 2018, 2254
CviQI GTAC 5 cut(s) 134, 316, 670, 925, 1056
DdeI CTNAG 7 cut(s) 353, 378, 431, 932, 1051, 1184, 1387
DpnI GATC 9 cut(s) 82, 621, 969, 1098, 1260, 1469, 1634, 2163, 2687
DpnII GATC 9 cut(s) 80, 619, 967, 1096, 1258, 1467, 1632, 2161, 2685
DrdI GACNNNNNNGTC 1 cut(s) 2281
DseDI GACNNNNNNGTC 1 cut(s) 2281
EaeI YGGCCR 1 cut(s) 1883
Eam1104I CTCTTC 3 cut(s) 1308, 1813, 1984
EarI CTCTTC 3 cut(s) 1308, 1813, 1984
EciI GGCGGA 1 cut(s) 2176
Ecl136II GAGCTC 1 cut(s) 2546
Eco130I CCWWGG 3 cut(s) 1316, 1559, 1827
Eco24I GRGCYC 1 cut(s) 2548
Eco31I GGTCTC 1 cut(s) 285
Eco32I GATATC 2 cut(s) 1162, 2488
Eco47I GGWCC 3 cut(s) 1556, 1850, 1928
Eco53kI GAGCTC 1 cut(s) 2546
Eco57I CTGAAG 2 cut(s) 1559, 2685
Eco72I CACGTG 2 cut(s) 827, 1229
Eco81I CCTNAGG 1 cut(s) 353
EcoICRI GAGCTC 1 cut(s) 2546
EcoO109I RGGNCCY 1 cut(s) 1556
EcoRI GAATTC 2 cut(s) 91, 1080
EcoRII CCWGG 4 cut(s) 387, 684, 1523, 1930
EcoRV GATATC 2 cut(s) 1162, 2488
EcoT14I CCWWGG 3 cut(s) 1316, 1559, 1827
EcoT38I GRGCYC 1 cut(s) 2548
ErhI CCWWGG 3 cut(s) 1316, 1559, 1827
FaeI CATG 8 cut(s) 316, 696, 789, 1037, 1368, 1781, 2021, 2257
FalI AAGNNNNNCTT 4 cut(s) 471, 503, 1595, 1627
FaqI GGGAC 3 cut(s) 1316, 1794, 1855
FatI CATG 8 cut(s) 312, 692, 785, 1033, 1364, 1777, 2017, 2253
FauI CCCGC 2 cut(s) 890, 2016
FauNDI CATATG 1 cut(s) 1201
FbaI TGATCA 1 cut(s) 967
Fnu4HI GCNGC 7 cut(s) 20, 516, 1073, 1212, 1215, 1883, 2376
FokI GGATG 5 cut(s) 590, 1333, 1408, 1890, 2506
FriOI GRGCYC 1 cut(s) 2548
Fsp4HI GCNGC 7 cut(s) 20, 516, 1073, 1212, 1215, 1883, 2376
FspBI CTAG 7 cut(s) 137, 302, 1317, 1529, 1560, 1847, 2303
GluI GCNGC 7 cut(s) 20, 516, 1073, 1212, 1215, 1883, 2376
GsuI CTGGAG 1 cut(s) 980
HaeIII GGCC 2 cut(s) 515, 1885
HapII CCGG 3 cut(s) 40, 913, 1998
Hin1II CATG 8 cut(s) 316, 696, 789, 1037, 1368, 1781, 2021, 2257
HincII GTYRAC 4 cut(s) 1129, 1273, 1451, 2640
HindII GTYRAC 4 cut(s) 1129, 1273, 1451, 2640
HindIII AAGCTT 1 cut(s) 777
HpaII CCGG 3 cut(s) 40, 913, 1998
HphI GGTGA 3 cut(s) 789, 1659, 2477
Hpy166II GTNNAC 9 cut(s) 163, 797, 991, 1129, 1273, 1451, 2320, 2426, 2640
Hpy188III TCNNGA 6 cut(s) 400, 599, 913, 959, 1034, 1568
Hpy8I GTNNAC 9 cut(s) 163, 797, 991, 1129, 1273, 1451, 2320, 2426, 2640
HpyCH4III ACNGT 4 cut(s) 909, 995, 1066, 1763
HpyF10VI GCNNNNNNNGC 6 cut(s) 891, 1223, 1534, 2003, 2411, 2543
HpyF3I CTNAG 7 cut(s) 353, 378, 431, 932, 1051, 1184, 1387
Hsp92II CATG 8 cut(s) 316, 696, 789, 1037, 1368, 1781, 2021, 2257
Kpn2I TCCGGA 1 cut(s) 912
Ksp22I TGATCA 1 cut(s) 967
Kzo9I GATC 9 cut(s) 80, 619, 967, 1096, 1258, 1467, 1632, 2161, 2685
LguI GCTCTTC 1 cut(s) 1308
LmnI GCTCC 3 cut(s) 687, 1829, 2530
Lsp1109I GCAGC 5 cut(s) 31, 1084, 1198, 1201, 2362
LweI GCATC 6 cut(s) 1104, 1270, 1430, 1717, 1841, 1948
MaeI CTAG 7 cut(s) 137, 302, 1317, 1529, 1560, 1847, 2303
MaeIII GTNAC 4 cut(s) 145, 457, 2305, 2398
MalI GATC 9 cut(s) 82, 621, 969, 1098, 1260, 1469, 1634, 2163, 2687
MboI GATC 9 cut(s) 80, 619, 967, 1096, 1258, 1467, 1632, 2161, 2685
MfeI CAATTG 1 cut(s) 176
MflI RGATCY 4 cut(s) 80, 1467, 1632, 2161
MhlI GDGCHC 4 cut(s) 684, 896, 946, 2548
MlyI GAGTC 9 cut(s) 19, 45, 116, 1452, 1837, 2248, 2315, 2487, 2509
MmeI TCCRAC 2 cut(s) 670, 2113
MroI TCCGGA 1 cut(s) 912
MroXI GAANNNNTTC 2 cut(s) 2112, 2151
MslI CAYNNNNRTG 2 cut(s) 790, 1620
MspI CCGG 3 cut(s) 40, 913, 1998
MspR9I CCNGG 4 cut(s) 389, 686, 1525, 1932
MunI CAATTG 1 cut(s) 176
Mva1269I GAATGC 1 cut(s) 2461
MvaI CCWGG 4 cut(s) 389, 686, 1525, 1932
MwoI GCNNNNNNNGC 6 cut(s) 891, 1223, 1534, 2003, 2411, 2543
NdeI CATATG 1 cut(s) 1201
NdeII GATC 9 cut(s) 80, 619, 967, 1096, 1258, 1467, 1632, 2161, 2685
NheI GCTAGC 1 cut(s) 1528
NlaIII CATG 8 cut(s) 316, 696, 789, 1037, 1368, 1781, 2021, 2257
NlaIV GGNNCC 2 cut(s) 1825, 1996
NspI RCATGY 5 cut(s) 696, 789, 1368, 1781, 2021
PaeI GCATGC 1 cut(s) 789
PagI TCATGA 1 cut(s) 1033
PciI ACATGT 1 cut(s) 2017
PciSI GCTCTTC 1 cut(s) 1308
PcsI WCGNNNNNNNCGW 1 cut(s) 832
PctI GAATGC 1 cut(s) 2461
PdmI GAANNNNTTC 2 cut(s) 2112, 2151
PfeI GAWTC 6 cut(s) 305, 335, 752, 1325, 2299, 2645
PinAI ACCGGT 1 cut(s) 39
PkrI GCNGC 7 cut(s) 21, 517, 1074, 1213, 1216, 1884, 2377
Ple19I CGATCG 1 cut(s) 2688
PleI GAGTC 9 cut(s) 18, 45, 116, 1452, 1837, 2247, 2315, 2487, 2509
PmaCI CACGTG 2 cut(s) 827, 1229
PmlI CACGTG 2 cut(s) 827, 1229
PpsI GAGTC 9 cut(s) 18, 45, 116, 1452, 1837, 2247, 2315, 2487, 2509
Ppu21I YACGTR 3 cut(s) 669, 827, 1229
PpuMI RGGWCCY 1 cut(s) 1556
PscI ACATGT 1 cut(s) 2017
PshBI ATTAAT 2 cut(s) 1674, 2601
Psp124BI GAGCTC 1 cut(s) 2548
Psp1406I AACGTT 4 cut(s) 106, 373, 660, 1416
Psp5II RGGWCCY 1 cut(s) 1556
Psp6I CCWGG 4 cut(s) 387, 684, 1523, 1930
PspCI CACGTG 2 cut(s) 827, 1229
PspGI CCWGG 4 cut(s) 387, 684, 1523, 1930
PspN4I GGNNCC 2 cut(s) 1825, 1996
PspPI GGNCC 3 cut(s) 1556, 1850, 1928
PspPPI RGGWCCY 1 cut(s) 1556
PsuI RGATCY 4 cut(s) 80, 1467, 1632, 2161
PvuI CGATCG 1 cut(s) 2688
RsaI GTAC 5 cut(s) 135, 317, 671, 926, 1057
RsaNI GTAC 5 cut(s) 134, 316, 670, 925, 1056
RseI CAYNNNNRTG 2 cut(s) 790, 1620
SacI GAGCTC 1 cut(s) 2548
SapI GCTCTTC 1 cut(s) 1308
SatI GCNGC 7 cut(s) 20, 516, 1073, 1212, 1215, 1883, 2376
Sau3AI GATC 9 cut(s) 80, 619, 967, 1096, 1258, 1467, 1632, 2161, 2685
Sau96I GGNCC 3 cut(s) 1556, 1850, 1928
ScaI AGTACT 1 cut(s) 135
SchI GAGTC 9 cut(s) 19, 45, 116, 1452, 1837, 2248, 2315, 2487, 2509
ScrFI CCNGG 4 cut(s) 389, 686, 1525, 1932
SduI GDGCHC 4 cut(s) 684, 896, 946, 2548
SfaNI GCATC 6 cut(s) 1104, 1270, 1430, 1717, 1841, 1948
SfcI CTRYAG 2 cut(s) 1062, 1471
SinI GGWCC 3 cut(s) 1556, 1850, 1928
SmiMI CAYNNNNRTG 2 cut(s) 790, 1620
SmlI CTYRAG 3 cut(s) 650, 2406, 2633
SmoI CTYRAG 3 cut(s) 650, 2406, 2633
SpeI ACTAGT 1 cut(s) 136
SphI GCATGC 1 cut(s) 789
SsiI CCGC 7 cut(s) 516, 883, 1048, 1882, 2023, 2187, 2378
SspI AATATT 1 cut(s) 2215
SspMI CTAG 7 cut(s) 137, 302, 1317, 1529, 1560, 1847, 2303
SstI GAGCTC 1 cut(s) 2548
StyD4I CCNGG 4 cut(s) 387, 684, 1523, 1930
StyI CCWWGG 3 cut(s) 1316, 1559, 1827
TaaI ACNGT 4 cut(s) 909, 995, 1066, 1763
TaqI TCGA 5 cut(s) 188, 622, 1158, 1492, 2324
TatI WGTACW 3 cut(s) 133, 315, 924
TauI GCSGC 2 cut(s) 518, 1885
TfiI GAWTC 6 cut(s) 305, 335, 752, 1325, 2299, 2645
TscAI CASTG 4 cut(s) 349, 718, 1282, 1768
TseI GCWGC 5 cut(s) 19, 1072, 1211, 1214, 2375
TspGWI ACGGA 4 cut(s) 1282, 1318, 2543, 2569
TspRI CASTG 4 cut(s) 349, 718, 1282, 1768
VpaK11BI GGWCC 3 cut(s) 1556, 1850, 1928
VspI ATTAAT 2 cut(s) 1674, 2601
XapI RAATTY 4 cut(s) 91, 395, 1080, 1859
XceI RCATGY 5 cut(s) 696, 789, 1368, 1781, 2021
XcmI CCANNNNNNNNNTGG 1 cut(s) 1738
XmaJI CCTAGG 2 cut(s) 1316, 1559
XmnI GAANNNNTTC 2 cut(s) 2112, 2151
XspI CTAG 7 cut(s) 137, 302, 1317, 1529, 1560, 1847, 2303
ZrmI AGTACT 1 cut(s) 135
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.