Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4A

Orthogroup ID

OG0001261

Physical Location & Seq

Genomic Coordinates Forward (+)

5758509 .. 5773005

Gene Structure 14497 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4AG028500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1962 bp

ATGCACAGAAGCCTTTTGACCCTAAGGTCATCTGGTGTCTCCCCATTTTTCAAATGCTGGTTTATTGACCTCATCAAGGTCCAAACCAATCATTCAGCTCAAAAACAACAGCTTCTTCTCTCTGACAGAGATGCAGCAGAAGATGGTTGTGAGTCAGTTGCAGCTATGCGTTTTGCCACATCGGTTTCCGAGATTCAATCCCTCTCCTTCTCCAAAGAGGAGCCATATGATGCTGACATCTCAGGAAATATATGCCCTGCCAGTTCTGGTGTAGCCAATCTTCATCTATACATGGACGTTGATAAACCTATGATTCCAATGAGGAAGAAAATTAGTGACTTTACCAAAATGATTGAAGTGGCACCAGACTCAATCCTAGGAAAAGGCAAGGTCAGGTCTCAAAAGACAGGCGATGGACTAGATTCCACTATGTACATAAATGTTGAAGATGATTCGGACACTGAACTCCTTAGGATAGAACAAGTAAAACGTTCTCAGCAGATTCACCAAGCTAAAGTCTTGATGGGATTGACGTGCTTATATATTCCACTTAGACTGGCAAAGCTAAATGTCGTTGATACTTTCATTAAGATTGTCCAAGAAAGACTTCTCTGTGCTGTTCAAACTTCAGGGGCCGCCACCTTGCCTTTCGCCTGTGCTTCTAATTCTCTGAATAAGCCCATGCCTCCTGGATTGGATGTGTTGTTGCAATCATTTCAATATGTTAGAGGGAGCTTTGAACGATTGTTATATCTTTTTAACGTCCAACTTGAGAAAAACGTTGCCACGTACTTCATAGTGCTCCTGGTAGCATGTGTCTCATTTGTTATCATTGGTGGTTTCCTATATTTCAAGTTCAGGGATAGTAAAGAATCTTTGGAGGACTGCTTCTGGGAAGCTTGGGCTTGCCTATGTTCATCATCTACACATCTGAAGCAAAGAACACGGAATGAACGTGTTGTTGGTTTCGTTCTTGCTATAGGGGGCATATTATTTTACGGCCGCTTATCGAGCGCAATGACTGAACAGTTCCGGAGCAATATGGACAAACTCAGAGAAGGGGCACAAATGCCAGTTCTGGAGACAGATCACATCATTATTTGTGGAGTGAACAGTCATCTTCCTTTCATACTAGAGCAAATAAATAAGTATCATGAAGTTGCTGTCCGCTTAGGTACTACTACAGCTAGGAAGCAAAGAATTCTTCTTATGTCTGATCTAACAAGAGAGCAGATGCACAAGAAGGCTGACGATATGGCCAAAGATTTTAACCATATCGATATCCTTACAAAAAGAAATAAGGCAAGAAATGGTGCCTGTCAAGCCAAACTAAAACATGTGCAGGTTTCACATAAGATTGGAAACCCAATGAACTTTGACACCTTACAAGAAACCATAAGCAATATCCAACATTCTTCGAAGAATGAAGATATTCCCTTATCCATTGTTGTAATATCTGATAGAGAATGGCTTCTTGGAGATCCAAACAGGGCAGACAAGCAATCCGCCTATTCCCTTCTTCTTGCTGAAAATATTTGCAACAAACTTGGCGTGAAGGTGCAGAATCTAGTTACAGAGATTGTGGACTCGAAATTGGGGAAACAAATCACAAGAATAAAGCCATCCCTGACTTATATTGCTGTGGAGGAAGTAATGAGCCTCGTAACAGCTCAAGTCGCCGTGGACAGTGAACTAAATGAGGTGTGGAAAGATATTCTGAATGCAGAAGGTGATGAAATATATGTGAAGAATATCAGACTCTATATGAAAGAAGGAGAGACTCCATCCTTCACGGAGCTTGCTAAAAGAGCACATTTACGGAAAGAAGTTGCCATAGGTTATGTGAAAAACAATAAGAAGGTCATTAATCCAGTTCCCAAATCAGAACCCCTGTCCCTTGAGTTGACAGATTCGTTAATAGTTATATCTGAGCTTGAAGGAGAACAACCGATCGTTATGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0031967 GO:0031975 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Castor_Poll_mid

Protein Analysis

653

Amino Acids

73.4

Weight (kDa)

7.19

Isoelectric Point (pI)

50.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Castor_Poll_mid	PF06241	549 - 647	7.2e-06	Castor and Pollux, part of voltage-gated ion channel

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0001261)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G02940 AT5G02940 AT5G43745
fragaria_vesca	FvH4_4g02230 FvH4_4g02230 FvH4_4g02230 FvH4_4g02230 FvH4_4g02230 FvH4_4g02230 FvH4_4g02230 FvH4_4g02230 FvH4_4g02230 FvH4_4g02230 FvH4_4g02230
malus_domestica	MD11G1069300.v1.1 MD13G1204000.v1.1 MD16G1206000.v1.1
prunus_persica	Prupe.1G027100_v2.0.a1 Prupe.1G027100_v2.0.a1 Prupe.1G027100_v2.0.a1
pyrus_communis	pycom11g05780 pycom13g17720
rosa_chinensis	RchiOBHm_Chr4g0389551 RchiOBHm_Chr4g0389561 RchiOBHm_Chr4g0389571 RchiOBHm_Chr4g0389581
rosa_laevigata	RLG00000009970 RLG00000009971 RLG00000009972
rosa_multiflora	Rmu_co8238337.1_g000001 Rmu_co8398985.1_g000001 Rmu_sc0010540.1_g000001 Rmu_ssc0000478.1_g000001 Rmu_ssc0000478.1_g000002 Rmu_ssc0000478.1_g000006
rosa_roxburghii	Rroxscaffold_5G00335510 Rroxscaffold_5G00335520 Rroxscaffold_5G00335530
rosa_rugosa	Rorug03G0324000
rosa_samantha	Rh2BG306500 Rh2CG284600 Rh4AG028300 Rh4AG028400 Rh4AG028500 Rh4BG021500 Rh4BG021600 Rh4BG021700 Rh4CG030500 Rh4CG030700 Rh4DG022100 Rh4DG022200 Rh4DG022300
rosa_wichuraiana	Rw4G002110 Rw4G002120 Rw4G002130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	25
Acc36I	ACCTGC	1 cut(s)	1333
AccB1I	GGYRCC	2 cut(s)	361, 1313
AccIII	TCCGGA	1 cut(s)	1032
AciI	CCGC	4 cut(s)	636, 1003, 1168, 1506
AclI	AACGTT	2 cut(s)	490, 780
AclWI	GGATC	1 cut(s)	1475
AcoI	YGGCCR	2 cut(s)	1000, 1257
AcsI	RAATTY	1 cut(s)	1200
AcuI	CTGAAG	2 cut(s)	612, 953
AfaI	GTAC	3 cut(s)	434, 791, 1177
AfiI	CCNNNNNNNGG	1 cut(s)	76
AflIII	ACRYGT	2 cut(s)	955, 1336
AgsI	TTSAA	9 cut(s)	52, 197, 356, 446, 623, 719, 740, 853, 1937
AjiI	CACGTC	1 cut(s)	534
AjnI	CCWGG	2 cut(s)	688, 804
AjuI	GAANNNNNNNTTGG	6 cut(s)	591, 623, 945, 977, 1458, 1490
Alw21I	GWGCWC	2 cut(s)	804, 1813
Alw26I	GTCTC	5 cut(s)	43, 402, 823, 1076, 1772
AlwI	GGATC	1 cut(s)	1475
Aor13HI	TCCGGA	1 cut(s)	1032
AoxI	GGCC	3 cut(s)	633, 1000, 1257
ApeKI	GCWGC	2 cut(s)	134, 161
ApoI	RAATTY	1 cut(s)	1200
AseI	ATTAAT	1 cut(s)	1866
Asp700I	GAANNNNTTC	3 cut(s)	606, 1431, 1470
AspA2I	CCTAGG	1 cut(s)	376
AspLEI	GCGC	1 cut(s)	1016
AspS9I	GGNCC	2 cut(s)	79, 633
AsuHPI	GGTGA	2 cut(s)	497, 1742
AsuII	TTCGAA	1 cut(s)	1418
AvaII	GGWCC	1 cut(s)	79
AvrII	CCTAGG	1 cut(s)	376
AxyI	CCTNAGG	2 cut(s)	23, 470
BaeGI	GKGCMC	1 cut(s)	1066
BalI	TGGCCA	1 cut(s)	1259
BanI	GGYRCC	2 cut(s)	361, 1313
BarI	GAAGNNNNNNTAC	2 cut(s)	264, 296
Bbv12I	GWGCWC	2 cut(s)	804, 1813
BbvI	GCAGC	2 cut(s)	146, 173
BccI	CCATC	5 cut(s)	137, 407, 517, 1630, 1792
BceAI	ACGGC	2 cut(s)	1015, 1664
BciT130I	CCWGG	2 cut(s)	690, 806
BcoDI	GTCTC	5 cut(s)	43, 402, 823, 1076, 1772
BfaI	CTAG	5 cut(s)	377, 419, 1133, 1188, 1568
BfmI	CTRYAG	2 cut(s)	978, 1182
BfuAI	ACCTGC	1 cut(s)	1333
BisI	GCNGC	4 cut(s)	135, 162, 636, 1003
BlnI	CCTAGG	1 cut(s)	376
BlsI	GCNGC	4 cut(s)	136, 163, 637, 1004
Bme1390I	CCNGG	2 cut(s)	690, 806
Bme18I	GGWCC	1 cut(s)	79
BmgBI	CACGTC	1 cut(s)	534
BmgT120I	GGNCC	2 cut(s)	79, 633
BmiI	GGNNCC	4 cut(s)	222, 363, 634, 1315
BmrFI	CCNGG	2 cut(s)	690, 806
BmsI	GCATC	3 cut(s)	121, 220, 1224
BpmI	CTGGAG	1 cut(s)	1100
Bpu10I	CCTNAGC	1 cut(s)	1171
Bpu14I	TTCGAA	1 cut(s)	1418
BpuEI	CTTGAG	3 cut(s)	791, 1656, 1919
Bsa29I	ATCGAT	1 cut(s)	1278
BsaAI	YACGTR	1 cut(s)	789
BsaI	GGTCTC	1 cut(s)	402
BsaJI	CCNNGG	2 cut(s)	376, 1680
BsaWI	WCCGGW	1 cut(s)	1032
Bsc4I	CCNNNNNNNGG	1 cut(s)	76
Bse1I	ACTGG	4 cut(s)	261, 561, 1073, 1871
Bse21I	CCTNAGG	2 cut(s)	23, 470
Bse3DI	GCAATG	1 cut(s)	1023
BseAI	TCCGGA	1 cut(s)	1032
BseBI	CCWGG	2 cut(s)	690, 806
BseCI	ATCGAT	1 cut(s)	1278
BseDI	CCNNGG	2 cut(s)	376, 1680
BseGI	GGATG	3 cut(s)	703, 1622, 1784
BseLI	CCNNNNNNNGG	1 cut(s)	76
BseMI	GCAATG	1 cut(s)	1023
BseMII	CTCAG	4 cut(s)	255, 509, 1066, 1920
BseNI	ACTGG	4 cut(s)	261, 561, 1073, 1871
BseRI	GAGGAG	1 cut(s)	233
BseSI	GKGCMC	1 cut(s)	1066
BseX3I	CGGCCG	1 cut(s)	1000
BseXI	GCAGC	2 cut(s)	146, 173
BsgI	GTGCAG	2 cut(s)	1361, 1580
Bsh1285I	CGRYCG	2 cut(s)	1003, 1953
BshFI	GGCC	3 cut(s)	635, 1002, 1259
BshNI	GGYRCC	2 cut(s)	361, 1313
BshVI	ATCGAT	1 cut(s)	1278
BsiEI	CGRYCG	2 cut(s)	1003, 1953
BsiHKAI	GWGCWC	2 cut(s)	804, 1813
BsiSI	CCGG	1 cut(s)	1033
BslFI	GGGAC	1 cut(s)	1879
BslI	CCNNNNNNNGG	1 cut(s)	76
BsmAI	GTCTC	5 cut(s)	43, 402, 823, 1076, 1772
BsmFI	GGGAC	1 cut(s)	1879
BsmI	GAATGC	1 cut(s)	1726
BsnI	GGCC	3 cut(s)	635, 1002, 1259
Bso31I	GGTCTC	1 cut(s)	402
Bsp119I	TTCGAA	1 cut(s)	1418
Bsp1286I	GDGCHC	3 cut(s)	804, 1066, 1813
Bsp13I	TCCGGA	1 cut(s)	1032
Bsp1407I	TGTACA	1 cut(s)	432
Bsp143I	GATC	4 cut(s)	1087, 1216, 1480, 1950
BspACI	CCGC	4 cut(s)	636, 1003, 1168, 1506
BspANI	GGCC	3 cut(s)	635, 1002, 1259
BspCNI	CTCAG	4 cut(s)	254, 508, 1065, 1921
BspDI	ATCGAT	1 cut(s)	1278
BspEI	TCCGGA	1 cut(s)	1032
BspHI	TCATGA	1 cut(s)	1153
BspLI	GGNNCC	4 cut(s)	222, 363, 634, 1315
BspMI	ACCTGC	1 cut(s)	1333
BspPI	GGATC	1 cut(s)	1475
BspT104I	TTCGAA	1 cut(s)	1418
BspT107I	GGYRCC	2 cut(s)	361, 1313
BspTNI	GGTCTC	1 cut(s)	402
BsrDI	GCAATG	1 cut(s)	1023
BsrGI	TGTACA	1 cut(s)	432
BsrI	ACTGG	4 cut(s)	261, 561, 1073, 1871
BssECI	CCNNGG	2 cut(s)	376, 1680
BssMI	GATC	4 cut(s)	1087, 1216, 1480, 1950
BssT1I	CCWWGG	1 cut(s)	376
Bst2UI	CCWGG	2 cut(s)	690, 806
Bst4CI	ACNGT	3 cut(s)	1029, 1115, 1688
BstAUI	TGTACA	1 cut(s)	432
BstBAI	YACGTR	1 cut(s)	789
BstBI	TTCGAA	1 cut(s)	1418
BstC8I	GCNNGC	2 cut(s)	907, 1800
BstDEI	CTNAG	8 cut(s)	23, 241, 470, 495, 551, 1052, 1171, 1929
BstDSI	CCRYGG	1 cut(s)	1680
BstENI	CCTNNNNNAGG	1 cut(s)	74
BstF5I	GGATG	3 cut(s)	703, 1622, 1784
BstHHI	GCGC	1 cut(s)	1016
BstKTI	GATC	4 cut(s)	1090, 1219, 1483, 1953
BstMAI	GTCTC	5 cut(s)	43, 402, 823, 1076, 1772
BstMBI	GATC	4 cut(s)	1087, 1216, 1480, 1950
BstMCI	CGRYCG	2 cut(s)	1003, 1953
BstMWI	GCNNNNNNNGC	4 cut(s)	1011, 1322, 1676, 1808
BstNI	CCWGG	2 cut(s)	690, 806
BstNSI	RCATGY	2 cut(s)	816, 1340
BstSCI	CCNGG	2 cut(s)	688, 804
BstSFI	CTRYAG	2 cut(s)	978, 1182
BstSLI	GKGCMC	1 cut(s)	1066
BstV1I	GCAGC	2 cut(s)	146, 173
BstX2I	RGATCY	1 cut(s)	1480
BstYI	RGATCY	1 cut(s)	1480
BstZI	CGGCCG	1 cut(s)	1000
Bsu36I	CCTNAGG	2 cut(s)	23, 470
BsuRI	GGCC	3 cut(s)	635, 1002, 1259
BsuTUI	ATCGAT	1 cut(s)	1278
BtgI	CCRYGG	1 cut(s)	1680
BtgZI	GCGATG	1 cut(s)	426
BtrI	CACGTC	1 cut(s)	534
BtsCI	GGATG	3 cut(s)	703, 1622, 1784
BtsIMutI	CAGTG	2 cut(s)	459, 1693
BveI	ACCTGC	1 cut(s)	1333
Cac8I	GCNNGC	2 cut(s)	907, 1800
CciI	TCATGA	1 cut(s)	1153
CfoI	GCGC	1 cut(s)	1016
Cfr13I	GGNCC	2 cut(s)	79, 633
ClaI	ATCGAT	1 cut(s)	1278
Csp6I	GTAC	3 cut(s)	433, 790, 1176
CviAII	CATG	5 cut(s)	292, 682, 813, 1154, 1337
CviQI	GTAC	3 cut(s)	433, 790, 1176
DdeI	CTNAG	8 cut(s)	23, 241, 470, 495, 551, 1052, 1171, 1929
DpnI	GATC	4 cut(s)	1089, 1218, 1482, 1952
DpnII	GATC	4 cut(s)	1087, 1216, 1480, 1950
DrdI	GACNNNNNNGTC	1 cut(s)	25
DseDI	GACNNNNNNGTC	1 cut(s)	25
EaeI	YGGCCR	2 cut(s)	1000, 1257
EagI	CGGCCG	1 cut(s)	1000
EciI	GGCGGA	1 cut(s)	1495
EclXI	CGGCCG	1 cut(s)	1000
Eco130I	CCWWGG	1 cut(s)	376
Eco31I	GGTCTC	1 cut(s)	402
Eco32I	GATATC	1 cut(s)	1282
Eco47I	GGWCC	1 cut(s)	79
Eco52I	CGGCCG	1 cut(s)	1000
Eco57I	CTGAAG	2 cut(s)	612, 953
Eco81I	CCTNAGG	2 cut(s)	23, 470
EcoNI	CCTNNNNNAGG	1 cut(s)	74
EcoRI	GAATTC	1 cut(s)	1200
EcoRII	CCWGG	2 cut(s)	688, 804
EcoRV	GATATC	1 cut(s)	1282
EcoT14I	CCWWGG	1 cut(s)	376
ErhI	CCWWGG	1 cut(s)	376
FaeI	CATG	5 cut(s)	295, 685, 816, 1157, 1340
FalI	AAGNNNNNCTT	2 cut(s)	591, 623
FaqI	GGGAC	1 cut(s)	1879
FatI	CATG	5 cut(s)	291, 681, 812, 1153, 1336
FauNDI	CATATG	1 cut(s)	226
Fnu4HI	GCNGC	4 cut(s)	135, 162, 636, 1003
FokI	GGATG	3 cut(s)	710, 1609, 1771
Fsp4HI	GCNGC	4 cut(s)	135, 162, 636, 1003
FspBI	CTAG	5 cut(s)	377, 419, 1133, 1188, 1568
GlaI	GCGC	1 cut(s)	1015
GluI	GCNGC	4 cut(s)	135, 162, 636, 1003
GsuI	CTGGAG	1 cut(s)	1100
HaeIII	GGCC	3 cut(s)	635, 1002, 1259
HapII	CCGG	1 cut(s)	1033
HhaI	GCGC	1 cut(s)	1016
Hin1II	CATG	5 cut(s)	295, 685, 816, 1157, 1340
Hin6I	GCGC	1 cut(s)	1014
HinP1I	GCGC	1 cut(s)	1014
HincII	GTYRAC	1 cut(s)	1905
HindII	GTYRAC	1 cut(s)	1905
HindIII	AAGCTT	1 cut(s)	897
HpaII	CCGG	1 cut(s)	1033
HphI	GGTGA	2 cut(s)	497, 1742
Hpy166II	GTNNAC	5 cut(s)	1111, 1585, 1684, 1691, 1905
Hpy188III	TCNNGA	5 cut(s)	243, 520, 1033, 1079, 1154
Hpy8I	GTNNAC	5 cut(s)	1111, 1585, 1684, 1691, 1905
HpyCH4III	ACNGT	3 cut(s)	1029, 1115, 1688
HpyCH4IV	ACGT	7 cut(s)	297, 490, 533, 762, 780, 788, 955
HpyCH4V	TGCA	9 cut(s)	4, 134, 161, 709, 1237, 1342, 1539, 1561, 1724
HpyF10VI	GCNNNNNNNGC	4 cut(s)	1011, 1322, 1676, 1808
HpyF3I	CTNAG	8 cut(s)	23, 241, 470, 495, 551, 1052, 1171, 1929
HpySE526I	ACGT	7 cut(s)	297, 490, 533, 762, 780, 788, 955
Hsp92II	CATG	5 cut(s)	295, 685, 816, 1157, 1340
HspAI	GCGC	1 cut(s)	1014
Kpn2I	TCCGGA	1 cut(s)	1032
Kzo9I	GATC	4 cut(s)	1087, 1216, 1480, 1950
LmnI	GCTCC	5 cut(s)	220, 732, 807, 1035, 1795
Lsp1109I	GCAGC	2 cut(s)	146, 173
LweI	GCATC	3 cut(s)	121, 220, 1224
MaeI	CTAG	5 cut(s)	377, 419, 1133, 1188, 1568
MaeII	ACGT	7 cut(s)	297, 490, 533, 762, 780, 788, 955
MaeIII	GTNAC	3 cut(s)	335, 1570, 1663
MalI	GATC	4 cut(s)	1089, 1218, 1482, 1952
MboI	GATC	4 cut(s)	1087, 1216, 1480, 1950
MflI	RGATCY	1 cut(s)	1480
MhlI	GDGCHC	3 cut(s)	804, 1066, 1813
MlsI	TGGCCA	1 cut(s)	1259
MluCI	AATT	4 cut(s)	330, 664, 1200, 1592
MluNI	TGGCCA	1 cut(s)	1259
MlyI	GAGTC	5 cut(s)	161, 362, 1580, 1752, 1774
MmeI	TCCRAC	2 cut(s)	790, 1432
Mox20I	TGGCCA	1 cut(s)	1259
MroI	TCCGGA	1 cut(s)	1032
MroXI	GAANNNNTTC	3 cut(s)	606, 1431, 1470
MscI	TGGCCA	1 cut(s)	1259
MseI	TTAA	5 cut(s)	588, 759, 1269, 1866, 1916
Msp20I	TGGCCA	1 cut(s)	1259
MspI	CCGG	1 cut(s)	1033
MspR9I	CCNGG	2 cut(s)	690, 806
Mva1269I	GAATGC	1 cut(s)	1726
MvaI	CCWGG	2 cut(s)	690, 806
MwoI	GCNNNNNNNGC	4 cut(s)	1011, 1322, 1676, 1808
NdeI	CATATG	1 cut(s)	226
NdeII	GATC	4 cut(s)	1087, 1216, 1480, 1950
NlaIII	CATG	5 cut(s)	295, 685, 816, 1157, 1340
NlaIV	GGNNCC	4 cut(s)	222, 363, 634, 1315
NmuCI	GTSAC	1 cut(s)	335
NspI	RCATGY	2 cut(s)	816, 1340
NspV	TTCGAA	1 cut(s)	1418
PagI	TCATGA	1 cut(s)	1153
PciI	ACATGT	1 cut(s)	1336
PcsI	WCGNNNNNNNCGW	1 cut(s)	952
PctI	GAATGC	1 cut(s)	1726
PdmI	GAANNNNTTC	3 cut(s)	606, 1431, 1470
PfeI	GAWTC	8 cut(s)	193, 313, 422, 452, 502, 872, 1564, 1910
PfoI	TCCNGGA	1 cut(s)	688
PkrI	GCNGC	4 cut(s)	136, 163, 637, 1004
Ple19I	CGATCG	1 cut(s)	1953
PleI	GAGTC	5 cut(s)	160, 362, 1580, 1752, 1774
PpsI	GAGTC	5 cut(s)	160, 362, 1580, 1752, 1774
Ppu21I	YACGTR	1 cut(s)	789
PscI	ACATGT	1 cut(s)	1336
PshBI	ATTAAT	1 cut(s)	1866
Psp1406I	AACGTT	2 cut(s)	490, 780
Psp6I	CCWGG	2 cut(s)	688, 804
PspGI	CCWGG	2 cut(s)	688, 804
PspN4I	GGNNCC	4 cut(s)	222, 363, 634, 1315
PspPI	GGNCC	2 cut(s)	79, 633
PsuI	RGATCY	1 cut(s)	1480
PvuI	CGATCG	1 cut(s)	1953
RsaI	GTAC	3 cut(s)	434, 791, 1177
RsaNI	GTAC	3 cut(s)	433, 790, 1176
SaqAI	TTAA	5 cut(s)	588, 759, 1269, 1866, 1916
SatI	GCNGC	4 cut(s)	135, 162, 636, 1003
Sau3AI	GATC	4 cut(s)	1087, 1216, 1480, 1950
Sau96I	GGNCC	2 cut(s)	79, 633
SchI	GAGTC	5 cut(s)	161, 362, 1580, 1752, 1774
ScrFI	CCNGG	2 cut(s)	690, 806
SduI	GDGCHC	3 cut(s)	804, 1066, 1813
SfaNI	GCATC	3 cut(s)	121, 220, 1224
SfcI	CTRYAG	2 cut(s)	978, 1182
SfuI	TTCGAA	1 cut(s)	1418
SinI	GGWCC	1 cut(s)	79
SmlI	CTYRAG	3 cut(s)	770, 1671, 1898
SmoI	CTYRAG	3 cut(s)	770, 1671, 1898
Sse9I	AATT	4 cut(s)	330, 664, 1200, 1592
SsiI	CCGC	4 cut(s)	636, 1003, 1168, 1506
SspI	AATATT	1 cut(s)	1534
SspMI	CTAG	5 cut(s)	377, 419, 1133, 1188, 1568
StyD4I	CCNGG	2 cut(s)	688, 804
StyI	CCWWGG	1 cut(s)	376
TaaI	ACNGT	3 cut(s)	1029, 1115, 1688
TaiI	ACGT	7 cut(s)	300, 493, 536, 765, 783, 791, 958
TaqI	TCGA	4 cut(s)	1010, 1278, 1418, 1589
TasI	AATT	4 cut(s)	330, 664, 1200, 1592
TatI	WGTACW	1 cut(s)	432
TauI	GCSGC	2 cut(s)	638, 1005
TfiI	GAWTC	8 cut(s)	193, 313, 422, 452, 502, 872, 1564, 1910
Tru1I	TTAA	5 cut(s)	588, 759, 1269, 1866, 1916
Tru9I	TTAA	5 cut(s)	588, 759, 1269, 1866, 1916
TscAI	CASTG	2 cut(s)	466, 1693
TseFI	GTSAC	1 cut(s)	335
TseI	GCWGC	2 cut(s)	134, 161
Tsp45I	GTSAC	1 cut(s)	335
TspGWI	ACGGA	3 cut(s)	961, 1808, 1834
TspRI	CASTG	2 cut(s)	466, 1693
VpaK11BI	GGWCC	1 cut(s)	79
VspI	ATTAAT	1 cut(s)	1866
XagI	CCTNNNNNAGG	1 cut(s)	74
XapI	RAATTY	1 cut(s)	1200
XceI	RCATGY	2 cut(s)	816, 1340
XmaJI	CCTAGG	1 cut(s)	376
XmnI	GAANNNNTTC	3 cut(s)	606, 1431, 1470
XspI	CTAG	5 cut(s)	377, 419, 1133, 1188, 1568

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.