Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0001261

Physical Location & Seq

Genomic Coordinates Forward (+)

2905752 .. 2920162

Gene Structure 14411 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00335510.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2550 bp

ATGGTTGTGAGTCAGGTGCAGCTATGCGTTTTGCCACATCGGTTTCCGAGACTCAACCCCTCTCCTTCTCCTACTCCTTCTTCTCCAAACAGGAAATATATGCCCTGCCAGTTTTGGTGTATGAAATCTTCATCTTTACATGGACGTAATTTCATAACTCCAAACAGAGGAAAAGGCAAGGTCAGGTCTCAAAAGACAGGCAATAAACTAGATTCCACTATGTACATAAATTTTGAAGATGACTCGGACACCGAACTTCTTAGGATAGAACAAGTAAAAAGTTATCAGATTCACCTTGCTAAAGTCTTGATGGGATTGACGTGCTTATATATTCCACTTAGACTGGCAAAGCTAAATGTCGTTGATGCTTTCATTAAGATTGTCAAAGAAAGACTTCTCTGCACTGTTCAAAATTTAGGGGCCGCCACCTTGCCTTTTGCCTGTTCTTCTAATTCTCTGAATAAACCACTGCCTCTTGGATTGGATGTGTCGTTGCCATCATTTCAAGATGTTAGATGGAGCTTTCAACGATTATTGTATCTTTTTAACGTCCAACTTGAGAAAAATGTTGCTACGTTCTTCATAGTGCTCCTGGTAGCATGTTTCTCATTTGTTATCATTGGTGGTTTCCTATTCTTCAAGTTTAGGGGTAGTAAAGAATCTTTGGAGGACTGCTTCTGGGAAGCTTGGGCATGCCTATGTTCATCATCGACACATCTAAAGCAAAGAACACGTATTGAACGTGTTATTGGTTTCGTTCTTGCTATATGGGGCATATTATTTTACTCCCGCTTATTGAGCACAATGACTGAACAGTTCCGGAGTAATATGTACAAGCTCAGAGAAGGGGCACAAATGCAAGTACTGGAGACTGATCACATCATTATTTGTGGAGTGAACAGTCATCTTTCTTTCATACTAAAGCAAATAAACAAGTATCATGAATTTGCTGTCCGCTTAGGTACTGCTACAGCTAGGAAGCAAAGAATTCTTCTTATGTCTGACTTACCAAGAAAGCAGATGGACAAGTTAGCTGACCATATTGCCAAAGATTTTAACCATATCGATATCCTTACAAAAAGTTGTAGCCTGAGCTTAACAAAATCATATGAAAGAGCCGCTGCCAACAAGGCACGTGCCATAATTATACTGCCAACAAAGGCAGATCGGTATGAAGTTGACACTGATGCCTTTCTATCCGTTCTGGCTCTTCAACCTATTCCTAAGATGGAATCCGTCCCCACTATTGTTGAGGTTTCAAGTTCAAATACATGCGAGCTTTTGAAGTCAATCTCAGGGTTGAAAGTAGCGCCTGTGGAGAACGTTTCATCCAAATTATTTGTTCAATGCTCTCGTCAAAAAGGACTCATAAAGATCTACAGACACTTGCTTAACTATCGAAAAAATGTGTTCAATCTTTGGAATTCTCCTAGTCTAGCAGGGCTAAAGTATAGGCAATTAGGGCCTGGATTTCAAGAGGCAGTTGTTTGTGGGCTTTATAGAAACGGGAAGGTATACTTCCACCCAAATGATGATGAGATCTTGCAGGAAACTGACAAAGTATTGTTCATTGCACCTGTCAGTGGGGGTAAGAAACCTCCTATTACTTATTCGAATGTTAAAGAAATAAGCGATGCCAATCGAAGTTTGGAGGATGTAGAAAAGGACAGTGATGCTCGATCAGATGGCTTAAAATTAAGGAAAGAAAATACACGTCCCAAGAGATGGGGCTCCAAGGCATCAGACGGGACTCTAGGACCAACAGAATTTATACTTCTTCTTGGATGGCGCCCAGACGTTGTTGAGATGATTGAAGAATATGACAATTATCTCGGACCTGGGAGTGTCATGGAGATATTGTCAGATGTACCGTTAGATGACAGAAATAAGGCAAGAAAAGGTGCCGGTCAAGCCAAACTAAAACATGTGCAGGTTTCACATAGGATTGGAAACCCAATGAACTTTGACACTTTACAAGAAACCATAAGCAATATCCAACATTCTTTGAAGAATGAAGATATTCCCTTATCCATTGTTGTAATATCCGACAGAGAATGGCTTCTTGGAGATCCAAACAGGGCAGACAAGCAATCCGCCTATTCCCTTCTTCTTGCTGAAAATATTTGCAACAAACTTGGCGTAAAGGTGCAGAATCTAGTTGCGGAAATCGTGGACTCGAAATTGGGGAAACAAATCACAAGAATAAAGCCATCCCTGACTTATATTGCTGCGGAGGAAGTAATGAGCCTCGTAACAGCTCAAGTTGCTGAGGACAGTGAACTAAATGAGGTGTGGAAAGACATTCTGGATGCAGACGGTGATGAAATATATGTGAAGGATATCAAACTCTATATGAAAGAAGGAGAGACTCCATCCTTCACGGAGCTTGCTGAAAGAGCTCACTTACGGAAGGAAGTTGCCATAGGTTATGTGAAAAACAATAAGAAGGTTATTAATCCAGTTCCCAAGTCAGAACCCCTCTCCCTTGAGTTGACAGATTCGTTAATAGTTATATCTGAACTTGAAGGAGAACAACCGATCGTTATGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0031967 GO:0031975 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Castor_Poll_mid

Protein Analysis

849

Amino Acids

95.8

Weight (kDa)

8.83

Isoelectric Point (pI)

42.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Castor_Poll_mid	PF06241	440 - 540	3.6e-37	Castor and Pollux, part of voltage-gated ion channel

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001261)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G02940 AT5G02940 AT5G43745
fragaria_vesca	FvH4_4g02230 FvH4_4g02230 FvH4_4g02230 FvH4_4g02230 FvH4_4g02230 FvH4_4g02230 FvH4_4g02230 FvH4_4g02230 FvH4_4g02230 FvH4_4g02230 FvH4_4g02230
malus_domestica	MD11G1069300.v1.1 MD13G1204000.v1.1 MD16G1206000.v1.1
prunus_persica	Prupe.1G027100_v2.0.a1 Prupe.1G027100_v2.0.a1 Prupe.1G027100_v2.0.a1
pyrus_communis	pycom11g05780 pycom13g17720
rosa_chinensis	RchiOBHm_Chr4g0389551 RchiOBHm_Chr4g0389561 RchiOBHm_Chr4g0389571 RchiOBHm_Chr4g0389581
rosa_laevigata	RLG00000009970 RLG00000009971 RLG00000009972
rosa_multiflora	Rmu_co8238337.1_g000001 Rmu_co8398985.1_g000001 Rmu_sc0010540.1_g000001 Rmu_ssc0000478.1_g000001 Rmu_ssc0000478.1_g000002 Rmu_ssc0000478.1_g000006
rosa_roxburghii	Rroxscaffold_5G00335510 Rroxscaffold_5G00335520 Rroxscaffold_5G00335530
rosa_rugosa	Rorug03G0324000
rosa_samantha	Rh2BG306500 Rh2CG284600 Rh4AG028300 Rh4AG028400 Rh4AG028500 Rh4BG021500 Rh4BG021600 Rh4BG021700 Rh4CG030500 Rh4CG030700 Rh4DG022100 Rh4DG022200 Rh4DG022300
rosa_wichuraiana	Rw4G002110 Rw4G002120 Rw4G002130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1921
AccB1I	GGYRCC	2 cut(s)	1788, 1901
AccB7I	CCANNNNNTGG	1 cut(s)	1725
AccI	GTMKAC	1 cut(s)	1515
AccIII	TCCGGA	1 cut(s)	819
AciI	CCGC	7 cut(s)	423, 790, 955, 1119, 2094, 2162, 2231
AclI	AACGTT	1 cut(s)	1323
AclWI	GGATC	1 cut(s)	2063
AcsI	RAATTY	6 cut(s)	229, 412, 944, 987, 1423, 1766
AcvI	CACGTG	1 cut(s)	1136
AcyI	GRCGYC	1 cut(s)	1789
AfaI	GTAC	5 cut(s)	224, 833, 864, 964, 1869
AfiI	CCNNNNNNNGG	3 cut(s)	167, 1583, 1725
AflIII	ACRYGT	4 cut(s)	731, 742, 1712, 1924
AjiI	CACGTC	2 cut(s)	321, 1715
AjnI	CCWGG	3 cut(s)	591, 1465, 1837
AjuI	GAANNNNNNNTTGG	4 cut(s)	732, 764, 2046, 2078
AloI	GAACNNNNNNTCC	2 cut(s)	1313, 1345
Alw21I	GWGCWC	3 cut(s)	591, 803, 2401
Alw26I	GTCTC	4 cut(s)	43, 192, 863, 2360
AlwI	GGATC	1 cut(s)	2063
Aor13HI	TCCGGA	1 cut(s)	819
AoxI	GGCC	2 cut(s)	420, 1463
ApeKI	GCWGC	3 cut(s)	19, 1121, 2228
ApoI	RAATTY	6 cut(s)	229, 412, 944, 987, 1423, 1766
AseI	ATTAAT	1 cut(s)	2454
Asp700I	GAANNNNTTC	3 cut(s)	393, 2019, 2058
AspLEI	GCGC	2 cut(s)	1312, 1791
AspS9I	GGNCC	4 cut(s)	420, 1463, 1757, 1835
AsuHPI	GGTGA	2 cut(s)	284, 2330
AsuII	TTCGAA	1 cut(s)	1613
AvaII	GGWCC	2 cut(s)	1757, 1835
BaeGI	GKGCMC	1 cut(s)	853
BanI	GGYRCC	2 cut(s)	1788, 1901
BanII	GRGCYC	2 cut(s)	1733, 2401
BarI	GAAGNNNNNNTAC	2 cut(s)	112, 144
BbrPI	CACGTG	1 cut(s)	1136
Bbv12I	GWGCWC	3 cut(s)	591, 803, 2401
BbvCI	CCTCAGC	1 cut(s)	2268
BbvI	GCAGC	3 cut(s)	31, 1108, 2215
BciT130I	CCWGG	3 cut(s)	593, 1467, 1839
BclI	TGATCA	1 cut(s)	874
BcoDI	GTCTC	4 cut(s)	43, 192, 863, 2360
BfaI	CTAG	6 cut(s)	209, 975, 1431, 1436, 1754, 2156
BfmI	CTRYAG	2 cut(s)	969, 1378
BfoI	RGCGCY	2 cut(s)	1313, 1792
BfuAI	ACCTGC	1 cut(s)	1921
BglI	GCCNNNNNGGC	1 cut(s)	1130
BglII	AGATCT	2 cut(s)	1374, 1539
BisI	GCNGC	5 cut(s)	20, 423, 1119, 1122, 2229
BlsI	GCNGC	5 cut(s)	21, 424, 1120, 1123, 2230
BmcAI	AGTACT	1 cut(s)	864
Bme1390I	CCNGG	3 cut(s)	593, 1467, 1839
Bme18I	GGWCC	2 cut(s)	1757, 1835
BmgBI	CACGTC	2 cut(s)	321, 1715
BmgT120I	GGNCC	4 cut(s)	420, 1463, 1757, 1835
BmiI	GGNNCC	4 cut(s)	421, 1732, 1790, 1903
BmrFI	CCNGG	3 cut(s)	593, 1467, 1839
BmsI	GCATC	6 cut(s)	355, 1177, 1624, 1663, 1748, 2299
BpmI	CTGGAG	1 cut(s)	887
Bpu10I	CCTNAGC	3 cut(s)	958, 1091, 2268
Bpu14I	TTCGAA	1 cut(s)	1613
BpuEI	CTTGAG	3 cut(s)	578, 2244, 2507
Bsa29I	ATCGAT	1 cut(s)	1065
BsaAI	YACGTR	2 cut(s)	734, 1136
BsaBI	GATNNNNATC	1 cut(s)	1638
BsaHI	GRCGYC	1 cut(s)	1789
BsaI	GGTCTC	1 cut(s)	192
BsaJI	CCNNGG	2 cut(s)	1734, 1838
BsaWI	WCCGGW	1 cut(s)	819
BsaXI	ACNNNNNCTCC	2 cut(s)	1844, 1874
Bsc4I	CCNNNNNNNGG	3 cut(s)	167, 1583, 1725
Bse118I	RCCGGY	1 cut(s)	1904
Bse1I	ACTGG	4 cut(s)	109, 348, 870, 2459
Bse3DI	GCAATG	1 cut(s)	1569
Bse8I	GATNNNNATC	1 cut(s)	1638
BseAI	TCCGGA	1 cut(s)	819
BseBI	CCWGG	3 cut(s)	593, 1467, 1839
BseCI	ATCGAT	1 cut(s)	1065
BseDI	CCNNGG	2 cut(s)	1734, 1838
BseGI	GGATG	7 cut(s)	490, 1328, 1660, 1790, 2210, 2314, 2372
BseJI	GATNNNNATC	1 cut(s)	1638
BseLI	CCNNNNNNNGG	3 cut(s)	167, 1583, 1725
BseMI	GCAATG	1 cut(s)	1569
BseMII	CTCAG	4 cut(s)	853, 1082, 1308, 2259
BseNI	ACTGG	4 cut(s)	109, 348, 870, 2459
BseSI	GKGCMC	1 cut(s)	853
BseXI	GCAGC	3 cut(s)	31, 1108, 2215
BsgI	GTGCAG	4 cut(s)	38, 385, 1949, 2168
Bsh1285I	CGRYCG	1 cut(s)	2541
BshFI	GGCC	2 cut(s)	422, 1465
BshNI	GGYRCC	2 cut(s)	1788, 1901
BshVI	ATCGAT	1 cut(s)	1065
BsiEI	CGRYCG	1 cut(s)	2541
BsiHKAI	GWGCWC	3 cut(s)	591, 803, 2401
BsiSI	CCGG	2 cut(s)	820, 1905
BslFI	GGGAC	3 cut(s)	1223, 1701, 1762
BslI	CCNNNNNNNGG	3 cut(s)	167, 1583, 1725
BsmAI	GTCTC	4 cut(s)	43, 192, 863, 2360
BsmFI	GGGAC	3 cut(s)	1223, 1701, 1762
BsnI	GGCC	2 cut(s)	422, 1465
Bso31I	GGTCTC	1 cut(s)	192
Bsp119I	TTCGAA	1 cut(s)	1613
Bsp1286I	GDGCHC	5 cut(s)	591, 803, 853, 1733, 2401
Bsp13I	TCCGGA	1 cut(s)	819
Bsp1407I	TGTACA	2 cut(s)	222, 831
Bsp143I	GATC	7 cut(s)	874, 1165, 1374, 1539, 1679, 2068, 2538
BspACI	CCGC	7 cut(s)	423, 790, 955, 1119, 2094, 2162, 2231
BspANI	GGCC	2 cut(s)	422, 1465
BspCNI	CTCAG	4 cut(s)	852, 1083, 1307, 2260
BspDI	ATCGAT	1 cut(s)	1065
BspEI	TCCGGA	1 cut(s)	819
BspHI	TCATGA	1 cut(s)	940
BspLI	GGNNCC	4 cut(s)	421, 1732, 1790, 1903
BspMI	ACCTGC	1 cut(s)	1921
BspPI	GGATC	1 cut(s)	2063
BspQI	GCTCTTC	1 cut(s)	1215
BspT104I	TTCGAA	1 cut(s)	1613
BspT107I	GGYRCC	2 cut(s)	1788, 1901
BspTNI	GGTCTC	1 cut(s)	192
BsrDI	GCAATG	1 cut(s)	1569
BsrFI	RCCGGY	1 cut(s)	1904
BsrGI	TGTACA	2 cut(s)	222, 831
BsrI	ACTGG	4 cut(s)	109, 348, 870, 2459
BssAI	RCCGGY	1 cut(s)	1904
BssECI	CCNNGG	2 cut(s)	1734, 1838
BssMI	GATC	7 cut(s)	874, 1165, 1374, 1539, 1679, 2068, 2538
BssNAI	GTATAC	1 cut(s)	1516
BssNI	GRCGYC	1 cut(s)	1789
BssT1I	CCWWGG	1 cut(s)	1734
Bst1107I	GTATAC	1 cut(s)	1516
Bst2UI	CCWGG	3 cut(s)	593, 1467, 1839
Bst4CI	ACNGT	7 cut(s)	406, 816, 902, 1670, 1872, 2276, 2318
Bst6I	CTCTTC	1 cut(s)	1215
BstACI	GRCGYC	1 cut(s)	1789
BstAUI	TGTACA	2 cut(s)	222, 831
BstBAI	YACGTR	2 cut(s)	734, 1136
BstBI	TTCGAA	1 cut(s)	1613
BstC8I	GCNNGC	3 cut(s)	694, 1277, 2388
BstDEI	CTNAG	8 cut(s)	260, 338, 839, 958, 1091, 1224, 1294, 2268
BstF5I	GGATG	7 cut(s)	490, 1328, 1660, 1790, 2210, 2314, 2372
BstH2I	RGCGCY	2 cut(s)	1313, 1792
BstHHI	GCGC	2 cut(s)	1312, 1791
BstKTI	GATC	7 cut(s)	877, 1168, 1377, 1542, 1682, 2071, 2541
BstMAI	GTCTC	4 cut(s)	43, 192, 863, 2360
BstMBI	GATC	7 cut(s)	874, 1165, 1374, 1539, 1679, 2068, 2538
BstMCI	CGRYCG	1 cut(s)	2541
BstMWI	GCNNNNNNNGC	6 cut(s)	798, 1130, 1462, 1910, 2264, 2396
BstNI	CCWGG	3 cut(s)	593, 1467, 1839
BstNSI	RCATGY	4 cut(s)	603, 696, 1275, 1928
BstSCI	CCNGG	3 cut(s)	591, 1465, 1837
BstSFI	CTRYAG	2 cut(s)	969, 1378
BstSLI	GKGCMC	1 cut(s)	853
BstV1I	GCAGC	3 cut(s)	31, 1108, 2215
BstX2I	RGATCY	3 cut(s)	1374, 1539, 2068
BstYI	RGATCY	3 cut(s)	1374, 1539, 2068
BstZ17I	GTATAC	1 cut(s)	1516
Bsu15I	ATCGAT	1 cut(s)	1065
BsuRI	GGCC	2 cut(s)	422, 1465
BsuTUI	ATCGAT	1 cut(s)	1065
BtgZI	GCGATG	1 cut(s)	1647
BtrI	CACGTC	2 cut(s)	321, 1715
BtsCI	GGATG	7 cut(s)	490, 1328, 1660, 1790, 2210, 2314, 2372
BtsI	GCAGTG	1 cut(s)	467
BtsIMutI	CAGTG	6 cut(s)	402, 467, 1182, 1588, 1675, 2281
BveI	ACCTGC	1 cut(s)	1921
Cac8I	GCNNGC	3 cut(s)	694, 1277, 2388
CciI	TCATGA	1 cut(s)	940
CfoI	GCGC	2 cut(s)	1312, 1791
Cfr10I	RCCGGY	1 cut(s)	1904
Cfr13I	GGNCC	4 cut(s)	420, 1463, 1757, 1835
ClaI	ATCGAT	1 cut(s)	1065
Csp6I	GTAC	5 cut(s)	223, 832, 863, 963, 1868
CspCI	CAANNNNNGTGG	2 cut(s)	1231, 1266
CviAII	CATG	7 cut(s)	140, 600, 693, 941, 1272, 1849, 1925
CviQI	GTAC	5 cut(s)	223, 832, 863, 963, 1868
DdeI	CTNAG	8 cut(s)	260, 338, 839, 958, 1091, 1224, 1294, 2268
DinI	GGCGCC	1 cut(s)	1790
DpnI	GATC	7 cut(s)	876, 1167, 1376, 1541, 1681, 2070, 2540
DpnII	GATC	7 cut(s)	874, 1165, 1374, 1539, 1679, 2068, 2538
Eam1104I	CTCTTC	1 cut(s)	1215
EarI	CTCTTC	1 cut(s)	1215
EciI	GGCGGA	1 cut(s)	2083
Ecl136II	GAGCTC	1 cut(s)	2399
Eco130I	CCWWGG	1 cut(s)	1734
Eco24I	GRGCYC	2 cut(s)	1733, 2401
Eco31I	GGTCTC	1 cut(s)	192
Eco32I	GATATC	2 cut(s)	1069, 2341
Eco47I	GGWCC	2 cut(s)	1757, 1835
Eco53kI	GAGCTC	1 cut(s)	2399
Eco72I	CACGTG	1 cut(s)	1136
EcoICRI	GAGCTC	1 cut(s)	2399
EcoO109I	RGGNCCY	1 cut(s)	1463
EcoRI	GAATTC	2 cut(s)	987, 1423
EcoRII	CCWGG	3 cut(s)	591, 1465, 1837
EcoRV	GATATC	2 cut(s)	1069, 2341
EcoT14I	CCWWGG	1 cut(s)	1734
EcoT38I	GRGCYC	2 cut(s)	1733, 2401
EgeI	GGCGCC	1 cut(s)	1790
EheI	GGCGCC	1 cut(s)	1790
ErhI	CCWWGG	1 cut(s)	1734
FaeI	CATG	7 cut(s)	143, 603, 696, 944, 1275, 1852, 1928
FalI	AAGNNNNNCTT	4 cut(s)	378, 410, 1502, 1534
FaqI	GGGAC	3 cut(s)	1223, 1701, 1762
FatI	CATG	7 cut(s)	139, 599, 692, 940, 1271, 1848, 1924
FauI	CCCGC	1 cut(s)	797
FauNDI	CATATG	1 cut(s)	1108
FbaI	TGATCA	1 cut(s)	874
FblI	GTMKAC	1 cut(s)	1515
Fnu4HI	GCNGC	5 cut(s)	20, 423, 1119, 1122, 2229
FokI	GGATG	7 cut(s)	497, 1315, 1667, 1797, 2197, 2321, 2359
FriOI	GRGCYC	2 cut(s)	1733, 2401
Fsp4HI	GCNGC	5 cut(s)	20, 423, 1119, 1122, 2229
FspBI	CTAG	6 cut(s)	209, 975, 1431, 1436, 1754, 2156
GlaI	GCGC	2 cut(s)	1311, 1790
GluI	GCNGC	5 cut(s)	20, 423, 1119, 1122, 2229
GsuI	CTGGAG	1 cut(s)	887
HaeII	RGCGCY	2 cut(s)	1313, 1792
HaeIII	GGCC	2 cut(s)	422, 1465
HapII	CCGG	2 cut(s)	820, 1905
HhaI	GCGC	2 cut(s)	1312, 1791
Hin1I	GRCGYC	1 cut(s)	1789
Hin1II	CATG	7 cut(s)	143, 603, 696, 944, 1275, 1852, 1928
Hin6I	GCGC	2 cut(s)	1310, 1789
HinP1I	GCGC	2 cut(s)	1310, 1789
HincII	GTYRAC	2 cut(s)	1180, 2493
HindII	GTYRAC	2 cut(s)	1180, 2493
HindIII	AAGCTT	1 cut(s)	684
HpaII	CCGG	2 cut(s)	820, 1905
HphI	GGTGA	2 cut(s)	284, 2330
Hpy166II	GTNNAC	6 cut(s)	898, 1180, 1516, 2173, 2279, 2493
Hpy188III	TCNNGA	6 cut(s)	307, 506, 820, 941, 1475, 2306
Hpy8I	GTNNAC	6 cut(s)	898, 1180, 1516, 2173, 2279, 2493
HpyCH4III	ACNGT	7 cut(s)	406, 816, 902, 1670, 1872, 2276, 2318
HpyCH4V	TGCA	9 cut(s)	19, 402, 859, 1546, 1574, 1930, 2127, 2149, 2312
HpyF10VI	GCNNNNNNNGC	6 cut(s)	798, 1130, 1462, 1910, 2264, 2396
HpyF3I	CTNAG	8 cut(s)	260, 338, 839, 958, 1091, 1224, 1294, 2268
Hsp92I	GRCGYC	1 cut(s)	1789
Hsp92II	CATG	7 cut(s)	143, 603, 696, 944, 1275, 1852, 1928
HspAI	GCGC	2 cut(s)	1310, 1789
KasI	GGCGCC	1 cut(s)	1788
Kpn2I	TCCGGA	1 cut(s)	819
Ksp22I	TGATCA	1 cut(s)	874
Kzo9I	GATC	7 cut(s)	874, 1165, 1374, 1539, 1679, 2068, 2538
LguI	GCTCTTC	1 cut(s)	1215
LmnI	GCTCC	4 cut(s)	519, 594, 1736, 2383
Lsp1109I	GCAGC	3 cut(s)	31, 1108, 2215
LweI	GCATC	6 cut(s)	355, 1177, 1624, 1663, 1748, 2299
MaeI	CTAG	6 cut(s)	209, 975, 1431, 1436, 1754, 2156
MaeIII	GTNAC	1 cut(s)	2251
MalI	GATC	7 cut(s)	876, 1167, 1376, 1541, 1681, 2070, 2540
MboI	GATC	7 cut(s)	874, 1165, 1374, 1539, 1679, 2068, 2538
MflI	RGATCY	3 cut(s)	1374, 1539, 2068
MhlI	GDGCHC	5 cut(s)	591, 803, 853, 1733, 2401
Mly113I	GGCGCC	1 cut(s)	1789
MlyI	GAGTC	7 cut(s)	19, 45, 236, 1359, 1744, 2168, 2362
MmeI	TCCRAC	3 cut(s)	577, 2020, 2070
MroI	TCCGGA	1 cut(s)	819
MroXI	GAANNNNTTC	3 cut(s)	393, 2019, 2058
MslI	CAYNNNNRTG	2 cut(s)	697, 1527
MspA1I	CMGCKG	1 cut(s)	1121
MspI	CCGG	2 cut(s)	820, 1905
MspR9I	CCNGG	3 cut(s)	593, 1467, 1839
MvaI	CCWGG	3 cut(s)	593, 1467, 1839
MwoI	GCNNNNNNNGC	6 cut(s)	798, 1130, 1462, 1910, 2264, 2396
NarI	GGCGCC	1 cut(s)	1789
NdeI	CATATG	1 cut(s)	1108
NdeII	GATC	7 cut(s)	874, 1165, 1374, 1539, 1679, 2068, 2538
NlaIII	CATG	7 cut(s)	143, 603, 696, 944, 1275, 1852, 1928
NlaIV	GGNNCC	4 cut(s)	421, 1732, 1790, 1903
NspI	RCATGY	4 cut(s)	603, 696, 1275, 1928
NspV	TTCGAA	1 cut(s)	1613
PaeI	GCATGC	1 cut(s)	696
PagI	TCATGA	1 cut(s)	940
PciI	ACATGT	1 cut(s)	1924
PciSI	GCTCTTC	1 cut(s)	1215
PcsI	WCGNNNNNNNCGW	1 cut(s)	739
PdmI	GAANNNNTTC	3 cut(s)	393, 2019, 2058
PfeI	GAWTC	6 cut(s)	212, 289, 659, 1232, 2152, 2498
PflMI	CCANNNNNTGG	1 cut(s)	1725
PkrI	GCNGC	5 cut(s)	21, 424, 1120, 1123, 2230
Ple19I	CGATCG	1 cut(s)	2541
PleI	GAGTC	7 cut(s)	18, 45, 236, 1359, 1744, 2168, 2362
PluTI	GGCGCC	1 cut(s)	1792
PmaCI	CACGTG	1 cut(s)	1136
PmlI	CACGTG	1 cut(s)	1136
PpsI	GAGTC	7 cut(s)	18, 45, 236, 1359, 1744, 2168, 2362
Ppu21I	YACGTR	2 cut(s)	734, 1136
PscI	ACATGT	1 cut(s)	1924
PshBI	ATTAAT	1 cut(s)	2454
Psp124BI	GAGCTC	1 cut(s)	2401
Psp1406I	AACGTT	1 cut(s)	1323
Psp6I	CCWGG	3 cut(s)	591, 1465, 1837
PspCI	CACGTG	1 cut(s)	1136
PspGI	CCWGG	3 cut(s)	591, 1465, 1837
PspN4I	GGNNCC	4 cut(s)	421, 1732, 1790, 1903
PspPI	GGNCC	4 cut(s)	420, 1463, 1757, 1835
PsuI	RGATCY	3 cut(s)	1374, 1539, 2068
PvuI	CGATCG	1 cut(s)	2541
RsaI	GTAC	5 cut(s)	224, 833, 864, 964, 1869
RsaNI	GTAC	5 cut(s)	223, 832, 863, 963, 1868
RseI	CAYNNNNRTG	2 cut(s)	697, 1527
SacI	GAGCTC	1 cut(s)	2401
SapI	GCTCTTC	1 cut(s)	1215
SatI	GCNGC	5 cut(s)	20, 423, 1119, 1122, 2229
Sau3AI	GATC	7 cut(s)	874, 1165, 1374, 1539, 1679, 2068, 2538
Sau96I	GGNCC	4 cut(s)	420, 1463, 1757, 1835
ScaI	AGTACT	1 cut(s)	864
SchI	GAGTC	7 cut(s)	19, 45, 236, 1359, 1744, 2168, 2362
ScrFI	CCNGG	3 cut(s)	593, 1467, 1839
SduI	GDGCHC	5 cut(s)	591, 803, 853, 1733, 2401
SfaNI	GCATC	6 cut(s)	355, 1177, 1624, 1663, 1748, 2299
SfcI	CTRYAG	2 cut(s)	969, 1378
SfoI	GGCGCC	1 cut(s)	1790
SfuI	TTCGAA	1 cut(s)	1613
SinI	GGWCC	2 cut(s)	1757, 1835
SmiMI	CAYNNNNRTG	2 cut(s)	697, 1527
SmlI	CTYRAG	3 cut(s)	557, 2259, 2486
SmoI	CTYRAG	3 cut(s)	557, 2259, 2486
SphI	GCATGC	1 cut(s)	696
SsiI	CCGC	7 cut(s)	423, 790, 955, 1119, 2094, 2162, 2231
SspDI	GGCGCC	1 cut(s)	1788
SspI	AATATT	1 cut(s)	2122
SspMI	CTAG	6 cut(s)	209, 975, 1431, 1436, 1754, 2156
SstI	GAGCTC	1 cut(s)	2401
StyD4I	CCNGG	3 cut(s)	591, 1465, 1837
StyI	CCWWGG	1 cut(s)	1734
TaaI	ACNGT	7 cut(s)	406, 816, 902, 1670, 1872, 2276, 2318
TaqI	TCGA	7 cut(s)	710, 1065, 1399, 1613, 1642, 1678, 2177
TatI	WGTACW	3 cut(s)	222, 831, 862
TauI	GCSGC	2 cut(s)	425, 1121
TfiI	GAWTC	6 cut(s)	212, 289, 659, 1232, 2152, 2498
TscAI	CASTG	6 cut(s)	409, 474, 1189, 1588, 1675, 2281
TseI	GCWGC	3 cut(s)	19, 1121, 2228
TspGWI	ACGGA	4 cut(s)	1189, 1225, 2396, 2422
TspRI	CASTG	6 cut(s)	409, 474, 1189, 1588, 1675, 2281
Van91I	CCANNNNNTGG	1 cut(s)	1725
VpaK11BI	GGWCC	2 cut(s)	1757, 1835
VspI	ATTAAT	1 cut(s)	2454
XapI	RAATTY	6 cut(s)	229, 412, 944, 987, 1423, 1766
XceI	RCATGY	4 cut(s)	603, 696, 1275, 1928
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1645
XmiI	GTMKAC	1 cut(s)	1515
XmnI	GAANNNNTTC	3 cut(s)	393, 2019, 2058
XspI	CTAG	6 cut(s)	209, 975, 1431, 1436, 1754, 2156
ZrmI	AGTACT	1 cut(s)	864

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.