Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0001261

Physical Location & Seq

Genomic Coordinates Forward (+)

4504892 .. 4514662

Gene Structure 9771 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ36269

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2538 bp

ATGGTTGTGAGTCAGTTGCAGCTATGCGTTTTGCCACACCGGTTTCCGAGACTCAATCCCTCTCCTTCTTCTCCAAAGAGGAAATATATGCCCTGCCAGTTCTGGTGTATCCAATCTTCATCTTTACATGGGCGTAATTTCATAACTCCAAACAGAGGAAAAGGCAAGGTCAGGTCTCAAAAGACAGGCGATAGACTAGATTCCACCATGTACATAAATGTTGAAGCTGATTCGGACACTGAACTCCTTAGGATAGAACAAGTGAAACGTTCTCAGATTCACCAAGCTAAAGTCTTGATGGGATTGACGTGCTTATATATTCCACTTAGACTGGCAAAGCTAAATGTTGTTGATACTTTCATTAAGATCGTCCAAGAAAGACTTATCTGTGCTGTCCAAACTTTAGAGGCTGCCACGTTGCCTTTTGCCTGTGCTTCTAATTCTCTGAATAAGCCCAAGCCTCTTGGATTGGATGTGTTGTTGCAATCATTTCAAGATGTTAGATGGAGATTTGATCGATTGTTGTATCTTTTTAACGTCCAACTTGAGAAAAACGTTGCCACGTACTTCATAGTGCTCCTGGTAGCATGTGTCTCATTTGTTATCACTGGTGGTTTCCTATATTTCAAGTTTAGGGATAGTAAAGAATCTTTGGAGGACTGCTTCTGGGAAGCTTGGGCATGCCTATGTTCACCTCACACACATCTAAAGCAAAGAACACGTATTGAACGTGTTATTGGTTTCGTTCTTGCTATATGGGGCATATTATTTTACTCCCGCTTATTGAGCACAATGACTGAACAGTTCCGGAGTAATATGTACAAGCTCAGAGAAGGGGCACAATTGCAAGTTCTGGAGACTGATCACATCATTATTTGTGGAGTGAACAGTCATCTTCCTTTCATACTAAAGCAAATAAATAAGTATCATGAAGTTGCTGTCCGCTTAGGTACTGCTACAGTTAGGCAGCAAAGAATTCTTCTTATGTCTGATCTACCAAGAGAGCAGATGCACAAAAAAGTTGACGATATTGCCAAAGATTTTAACCATATCGATATCCTTACAAAAAGTTGTAGCCTGAGCTTAACCAAATCATATGAAAGAGCTGCTGCCAACAAGGCACGTGCCATAATCATACTGCCAAAAAGGGCAGCTCGGTATGAAGTTGACACTGATGCCTTTCTATCCGTTCTGGCTCTTCAACCTATTCCTAAGATGGAATCCGTCCCCACTATTGTTGAGGTTTCAAGTTCAAATACATGCGAGCTTTTGAAGTCAATCTCAGGGTTGAAAGTAGAGCCTGTGGAGAACGTTGCATCCAAATTATTTGTTCAATGCTCTCGTCAACAAGGACTCATAAAGATCTACAGACACTTGCTTAATTATCGAAAAAATGTGTTCAATCTTTGCAATTCTCCCAGGCTAGCAGGGCTGAAGTATAGTCAATTAGGACCTGGGTTTCAAGAGGCAGTTGTTTGTGGGCTTTATAGAAATGGGAAGATATACTTCCACCCAAATGATGATGAGATCTTGCAGGAAACTGACAAAGTATTGTTCATTTCACCTGTTAATAGGGGTAAGAAGCCTCCTATTACTAACTCAAATGTTAAAGAAATAAGTGATGCCGATCAAAGTTTGGAGGATGTAGAAAAGGACAGTGATACTCAATCACATGCCTTAAAATTAAGGAAAGAAAATACACGTCCCAAGAGATGGGGCTCCAAGGCATCAGACGGGACTCTAGGACCAACAGAATTTATACTTCTTCTTGGATGGCGGCCAGACGTTGTTGAGATGATTGACGAATATGACAATTATCTCGGACCTGGGAGTATTGTGGAGATATTATCAGATGTACCGTTAGATGACAGAAATAAGGCAAGAAGAGGTGCCGGTCAAGCCAAACTAAAACATGTGCGGGTTTCACATAGGATTGGAAACCCGATGAACTTTGACACTCTACAAGAAACCATAAGCAATATCCAACATTCTTTGAAGAATGAAGATATTCCCTTATCCATTGTTGTAATATGCGATGGAGAATGGCTTCTTGGAGATCCAAACAGGGCAGACAAGCAATCCGCCTTTTCCCTTCTTCTTGCTGAAAATATTTGCAACAAACTTGGCGTAAAGGTGCAGAATCTAGTTACAGAGATTGTGGACTCGAAATTGGGGAAACAAATCACAAGAATAAAGCCATCGCTGACTTATATTGCTGCGGAGGAAGTAATGAGCCTCGTAACAGCTCAAGTCGCTGTGGAAAGTGAACTAAATGAGGTGTGGAAAGACATTCTGAATGCAGAAGGTGATGAAATATATGTGAAGGATATCAGACTCTATATGAAAGAAGGAGAGACTCCATCCTTCACGGAGCTTGCTGAAAGAGCTCATTTACGGAAGGAAGTTGCCATAGGTTATGTGAAAAACAATAAGAAGGTTATTAATCCAGTTCCCAAGTCAGAACCCCTCTCCCTTGAGTTGACAGATTCGTTAATAGTTATATCTGAACTTGAAGGAGAACAACCGATCGTTTTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0031967 GO:0031975 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Castor_Poll_mid

Protein Analysis

845

Amino Acids

95.7

Weight (kDa)

8.71

Isoelectric Point (pI)

45.18

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Castor_Poll_mid	PF06241	436 - 534	1.9e-38	Castor and Pollux, part of voltage-gated ion channel

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0001261)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G02940 AT5G02940 AT5G43745
fragaria_vesca	FvH4_4g02230 FvH4_4g02230 FvH4_4g02230 FvH4_4g02230 FvH4_4g02230 FvH4_4g02230 FvH4_4g02230 FvH4_4g02230 FvH4_4g02230 FvH4_4g02230 FvH4_4g02230
malus_domestica	MD11G1069300.v1.1 MD13G1204000.v1.1 MD16G1206000.v1.1
prunus_persica	Prupe.1G027100_v2.0.a1 Prupe.1G027100_v2.0.a1 Prupe.1G027100_v2.0.a1
pyrus_communis	pycom11g05780 pycom13g17720
rosa_chinensis	RchiOBHm_Chr4g0389551 RchiOBHm_Chr4g0389561 RchiOBHm_Chr4g0389571 RchiOBHm_Chr4g0389581
rosa_laevigata	RLG00000009970 RLG00000009971 RLG00000009972
rosa_multiflora	Rmu_co8238337.1_g000001 Rmu_co8398985.1_g000001 Rmu_sc0010540.1_g000001 Rmu_ssc0000478.1_g000001 Rmu_ssc0000478.1_g000002 Rmu_ssc0000478.1_g000006
rosa_roxburghii	Rroxscaffold_5G00335510 Rroxscaffold_5G00335520 Rroxscaffold_5G00335530
rosa_rugosa	Rorug03G0324000
rosa_samantha	Rh2BG306500 Rh2CG284600 Rh4AG028300 Rh4AG028400 Rh4AG028500 Rh4BG021500 Rh4BG021600 Rh4BG021700 Rh4CG030500 Rh4CG030700 Rh4DG022100 Rh4DG022200 Rh4DG022300
rosa_wichuraiana	Rw4G002110 Rw4G002120 Rw4G002130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1889
AccB7I	CCANNNNNTGG	1 cut(s)	1713
AccIII	TCCGGA	1 cut(s)	807
AciI	CCGC	6 cut(s)	778, 943, 1777, 1918, 2082, 2219
AclI	AACGTT	3 cut(s)	268, 555, 1311
AclWI	GGATC	1 cut(s)	2051
AcoI	YGGCCR	1 cut(s)	1778
AcsI	RAATTY	2 cut(s)	975, 1754
AcuI	CTGAAG	1 cut(s)	1454
AcvI	CACGTG	1 cut(s)	1124
AfaI	GTAC	5 cut(s)	212, 566, 821, 952, 1857
AfiI	CCNNNNNNNGG	2 cut(s)	155, 1713
AflIII	ACRYGT	4 cut(s)	719, 730, 1700, 1912
AgeI	ACCGGT	1 cut(s)	39
AjiI	CACGTC	2 cut(s)	309, 1703
AjnI	CCWGG	4 cut(s)	579, 1418, 1453, 1825
AjuI	GAANNNNNNNTTGG	4 cut(s)	720, 752, 2034, 2066
AloI	GAACNNNNNNTCC	2 cut(s)	1301, 1333
Alw21I	GWGCWC	3 cut(s)	579, 791, 2389
Alw26I	GTCTC	5 cut(s)	43, 180, 598, 851, 2348
AlwI	GGATC	1 cut(s)	2051
Aor13HI	TCCGGA	1 cut(s)	807
AoxI	GGCC	1 cut(s)	1778
ApeKI	GCWGC	7 cut(s)	19, 410, 967, 1106, 1109, 1151, 2216
ApoI	RAATTY	2 cut(s)	975, 1754
AseI	ATTAAT	1 cut(s)	2442
AsiGI	ACCGGT	1 cut(s)	39
Asp700I	GAANNNNTTC	2 cut(s)	2007, 2046
AspS9I	GGNCC	3 cut(s)	1451, 1745, 1823
AsuHPI	GGTGA	4 cut(s)	272, 684, 1554, 2318
AsuNHI	GCTAGC	1 cut(s)	1423
AvaII	GGWCC	3 cut(s)	1451, 1745, 1823
AxyI	CCTNAGG	1 cut(s)	248
BaeGI	GKGCMC	1 cut(s)	841
BanI	GGYRCC	1 cut(s)	1889
BanII	GRGCYC	2 cut(s)	1721, 2389
BarI	GAAGNNNNNNTAC	2 cut(s)	100, 132
BbrPI	CACGTG	1 cut(s)	1124
Bbv12I	GWGCWC	3 cut(s)	579, 791, 2389
BbvI	GCAGC	7 cut(s)	31, 397, 979, 1093, 1096, 1163, 2203
BccI	CCATC	8 cut(s)	292, 498, 1210, 1707, 1767, 2030, 2206, 2368
BciT130I	CCWGG	4 cut(s)	581, 1420, 1455, 1827
BciVI	GTATCC	1 cut(s)	119
BclI	TGATCA	1 cut(s)	862
BcoDI	GTCTC	5 cut(s)	43, 180, 598, 851, 2348
BfaI	CTAG	4 cut(s)	197, 1424, 1742, 2144
BfmI	CTRYAG	2 cut(s)	957, 1366
BfuI	GTATCC	1 cut(s)	119
BglI	GCCNNNNNGGC	1 cut(s)	1118
BglII	AGATCT	2 cut(s)	1362, 1527
BisI	GCNGC	8 cut(s)	20, 411, 968, 1107, 1110, 1152, 1778, 2217
BlsI	GCNGC	8 cut(s)	21, 412, 969, 1108, 1111, 1153, 1779, 2218
Bme1390I	CCNGG	4 cut(s)	581, 1420, 1455, 1827
Bme18I	GGWCC	3 cut(s)	1451, 1745, 1823
BmgBI	CACGTC	2 cut(s)	309, 1703
BmgT120I	GGNCC	3 cut(s)	1451, 1745, 1823
BmiI	GGNNCC	2 cut(s)	1720, 1891
BmrFI	CCNGG	4 cut(s)	581, 1420, 1455, 1827
BmsI	GCATC	5 cut(s)	999, 1165, 1325, 1612, 1736
BmtI	GCTAGC	1 cut(s)	1427
BpmI	CTGGAG	1 cut(s)	875
Bpu10I	CCTNAGC	2 cut(s)	946, 1079
BpuEI	CTTGAG	3 cut(s)	566, 2232, 2495
Bsa29I	ATCGAT	2 cut(s)	517, 1053
BsaAI	YACGTR	3 cut(s)	564, 722, 1124
BsaBI	GATNNNNATC	1 cut(s)	1626
BsaI	GGTCTC	1 cut(s)	180
BsaJI	CCNNGG	4 cut(s)	1418, 1454, 1722, 1826
BsaWI	WCCGGW	2 cut(s)	39, 807
Bsc4I	CCNNNNNNNGG	2 cut(s)	155, 1713
Bse118I	RCCGGY	2 cut(s)	39, 1892
Bse1I	ACTGG	4 cut(s)	97, 336, 613, 2447
Bse21I	CCTNAGG	1 cut(s)	248
Bse8I	GATNNNNATC	1 cut(s)	1626
BseAI	TCCGGA	1 cut(s)	807
BseBI	CCWGG	4 cut(s)	581, 1420, 1455, 1827
BseCI	ATCGAT	2 cut(s)	517, 1053
BseDI	CCNNGG	4 cut(s)	1418, 1454, 1722, 1826
BseGI	GGATG	5 cut(s)	478, 1316, 1648, 1778, 2360
BseJI	GATNNNNATC	1 cut(s)	1626
BseLI	CCNNNNNNNGG	2 cut(s)	155, 1713
BseMII	CTCAG	4 cut(s)	287, 841, 1070, 1296
BseNI	ACTGG	4 cut(s)	97, 336, 613, 2447
BseSI	GKGCMC	1 cut(s)	841
BseXI	GCAGC	7 cut(s)	31, 397, 979, 1093, 1096, 1163, 2203
BsgI	GTGCAG	1 cut(s)	2156
Bsh1285I	CGRYCG	1 cut(s)	2529
BshFI	GGCC	1 cut(s)	1780
BshNI	GGYRCC	1 cut(s)	1889
BshTI	ACCGGT	1 cut(s)	39
BshVI	ATCGAT	2 cut(s)	517, 1053
BsiEI	CGRYCG	1 cut(s)	2529
BsiHKAI	GWGCWC	3 cut(s)	579, 791, 2389
BsiSI	CCGG	3 cut(s)	40, 808, 1893
BslFI	GGGAC	3 cut(s)	1211, 1689, 1750
BslI	CCNNNNNNNGG	2 cut(s)	155, 1713
BsmAI	GTCTC	5 cut(s)	43, 180, 598, 851, 2348
BsmFI	GGGAC	3 cut(s)	1211, 1689, 1750
BsmI	GAATGC	1 cut(s)	2302
BsnI	GGCC	1 cut(s)	1780
Bso31I	GGTCTC	1 cut(s)	180
Bsp1286I	GDGCHC	5 cut(s)	579, 791, 841, 1721, 2389
Bsp13I	TCCGGA	1 cut(s)	807
Bsp1407I	TGTACA	2 cut(s)	210, 819
Bsp143I	GATC	9 cut(s)	366, 514, 862, 991, 1362, 1527, 1627, 2056, 2526
BspACI	CCGC	6 cut(s)	778, 943, 1777, 1918, 2082, 2219
BspANI	GGCC	1 cut(s)	1780
BspCNI	CTCAG	4 cut(s)	286, 840, 1071, 1295
BspDI	ATCGAT	2 cut(s)	517, 1053
BspEI	TCCGGA	1 cut(s)	807
BspHI	TCATGA	1 cut(s)	928
BspLI	GGNNCC	2 cut(s)	1720, 1891
BspOI	GCTAGC	1 cut(s)	1427
BspPI	GGATC	1 cut(s)	2051
BspQI	GCTCTTC	1 cut(s)	1203
BspT107I	GGYRCC	1 cut(s)	1889
BspTNI	GGTCTC	1 cut(s)	180
BsrFI	RCCGGY	2 cut(s)	39, 1892
BsrGI	TGTACA	2 cut(s)	210, 819
BsrI	ACTGG	4 cut(s)	97, 336, 613, 2447
BssAI	RCCGGY	2 cut(s)	39, 1892
BssECI	CCNNGG	4 cut(s)	1418, 1454, 1722, 1826
BssMI	GATC	9 cut(s)	366, 514, 862, 991, 1362, 1527, 1627, 2056, 2526
BssT1I	CCWWGG	1 cut(s)	1722
Bst2UI	CCWGG	4 cut(s)	581, 1420, 1455, 1827
Bst4CI	ACNGT	5 cut(s)	804, 890, 961, 1658, 1860
Bst6I	CTCTTC	2 cut(s)	1203, 1879
BstAUI	TGTACA	2 cut(s)	210, 819
BstBAI	YACGTR	3 cut(s)	564, 722, 1124
BstC8I	GCNNGC	4 cut(s)	682, 1265, 1425, 2376
BstDEI	CTNAG	8 cut(s)	248, 273, 326, 827, 946, 1079, 1212, 1282
BstF5I	GGATG	5 cut(s)	478, 1316, 1648, 1778, 2360
BstKTI	GATC	9 cut(s)	369, 517, 865, 994, 1365, 1530, 1630, 2059, 2529
BstMAI	GTCTC	5 cut(s)	43, 180, 598, 851, 2348
BstMBI	GATC	9 cut(s)	366, 514, 862, 991, 1362, 1527, 1627, 2056, 2526
BstMCI	CGRYCG	1 cut(s)	2529
BstMWI	GCNNNNNNNGC	6 cut(s)	786, 1118, 1429, 1898, 2252, 2384
BstNI	CCWGG	4 cut(s)	581, 1420, 1455, 1827
BstNSI	RCATGY	5 cut(s)	591, 684, 1263, 1676, 1916
BstSCI	CCNGG	4 cut(s)	579, 1418, 1453, 1825
BstSFI	CTRYAG	2 cut(s)	957, 1366
BstSLI	GKGCMC	1 cut(s)	841
BstV1I	GCAGC	7 cut(s)	31, 397, 979, 1093, 1096, 1163, 2203
BstX2I	RGATCY	3 cut(s)	1362, 1527, 2056
BstYI	RGATCY	3 cut(s)	1362, 1527, 2056
Bsu15I	ATCGAT	2 cut(s)	517, 1053
Bsu36I	CCTNAGG	1 cut(s)	248
BsuI	GTATCC	1 cut(s)	119
BsuRI	GGCC	1 cut(s)	1780
BsuTUI	ATCGAT	2 cut(s)	517, 1053
BtgZI	GCGATG	2 cut(s)	2049, 2184
BtrI	CACGTC	2 cut(s)	309, 1703
BtsCI	GGATG	5 cut(s)	478, 1316, 1648, 1778, 2360
BtsIMutI	CAGTG	4 cut(s)	237, 606, 1170, 1663
Cac8I	GCNNGC	4 cut(s)	682, 1265, 1425, 2376
CciI	TCATGA	1 cut(s)	928
Cfr10I	RCCGGY	2 cut(s)	39, 1892
Cfr13I	GGNCC	3 cut(s)	1451, 1745, 1823
ClaI	ATCGAT	2 cut(s)	517, 1053
Csp6I	GTAC	5 cut(s)	211, 565, 820, 951, 1856
CspAI	ACCGGT	1 cut(s)	39
CspCI	CAANNNNNGTGG	2 cut(s)	1219, 1254
CviAII	CATG	8 cut(s)	128, 208, 588, 681, 929, 1260, 1673, 1913
CviQI	GTAC	5 cut(s)	211, 565, 820, 951, 1856
DdeI	CTNAG	8 cut(s)	248, 273, 326, 827, 946, 1079, 1212, 1282
DpnI	GATC	9 cut(s)	368, 516, 864, 993, 1364, 1529, 1629, 2058, 2528
DpnII	GATC	9 cut(s)	366, 514, 862, 991, 1362, 1527, 1627, 2056, 2526
EaeI	YGGCCR	1 cut(s)	1778
Eam1104I	CTCTTC	2 cut(s)	1203, 1879
EarI	CTCTTC	2 cut(s)	1203, 1879
EciI	GGCGGA	1 cut(s)	2071
Ecl136II	GAGCTC	1 cut(s)	2387
Eco130I	CCWWGG	1 cut(s)	1722
Eco24I	GRGCYC	2 cut(s)	1721, 2389
Eco31I	GGTCTC	1 cut(s)	180
Eco32I	GATATC	2 cut(s)	1057, 2329
Eco47I	GGWCC	3 cut(s)	1451, 1745, 1823
Eco53kI	GAGCTC	1 cut(s)	2387
Eco57I	CTGAAG	1 cut(s)	1454
Eco72I	CACGTG	1 cut(s)	1124
Eco81I	CCTNAGG	1 cut(s)	248
EcoICRI	GAGCTC	1 cut(s)	2387
EcoO109I	RGGNCCY	1 cut(s)	1451
EcoRI	GAATTC	1 cut(s)	975
EcoRII	CCWGG	4 cut(s)	579, 1418, 1453, 1825
EcoRV	GATATC	2 cut(s)	1057, 2329
EcoT14I	CCWWGG	1 cut(s)	1722
EcoT38I	GRGCYC	2 cut(s)	1721, 2389
ErhI	CCWWGG	1 cut(s)	1722
FaeI	CATG	8 cut(s)	131, 211, 591, 684, 932, 1263, 1676, 1916
FalI	AAGNNNNNCTT	4 cut(s)	366, 398, 1490, 1522
FaqI	GGGAC	3 cut(s)	1211, 1689, 1750
FatI	CATG	8 cut(s)	127, 207, 587, 680, 928, 1259, 1672, 1912
FauI	CCCGC	2 cut(s)	785, 1911
FauNDI	CATATG	1 cut(s)	1096
FbaI	TGATCA	1 cut(s)	862
Fnu4HI	GCNGC	8 cut(s)	20, 411, 968, 1107, 1110, 1152, 1778, 2217
FokI	GGATG	5 cut(s)	485, 1303, 1655, 1785, 2347
FriOI	GRGCYC	2 cut(s)	1721, 2389
Fsp4HI	GCNGC	8 cut(s)	20, 411, 968, 1107, 1110, 1152, 1778, 2217
FspBI	CTAG	4 cut(s)	197, 1424, 1742, 2144
GluI	GCNGC	8 cut(s)	20, 411, 968, 1107, 1110, 1152, 1778, 2217
GsuI	CTGGAG	1 cut(s)	875
HaeIII	GGCC	1 cut(s)	1780
HapII	CCGG	3 cut(s)	40, 808, 1893
Hin1II	CATG	8 cut(s)	131, 211, 591, 684, 932, 1263, 1676, 1916
HincII	GTYRAC	4 cut(s)	1024, 1168, 1346, 2481
HindII	GTYRAC	4 cut(s)	1024, 1168, 1346, 2481
HindIII	AAGCTT	1 cut(s)	672
HpaII	CCGG	3 cut(s)	40, 808, 1893
HphI	GGTGA	4 cut(s)	272, 684, 1554, 2318
Hpy166II	GTNNAC	8 cut(s)	692, 886, 1024, 1168, 1346, 2161, 2267, 2481
Hpy188III	TCNNGA	6 cut(s)	295, 494, 808, 854, 929, 1463
Hpy8I	GTNNAC	8 cut(s)	692, 886, 1024, 1168, 1346, 2161, 2267, 2481
HpyCH4III	ACNGT	5 cut(s)	804, 890, 961, 1658, 1860
HpyF10VI	GCNNNNNNNGC	6 cut(s)	786, 1118, 1429, 1898, 2252, 2384
HpyF3I	CTNAG	8 cut(s)	248, 273, 326, 827, 946, 1079, 1212, 1282
Hsp92II	CATG	8 cut(s)	131, 211, 591, 684, 932, 1263, 1676, 1916
Kpn2I	TCCGGA	1 cut(s)	807
Ksp22I	TGATCA	1 cut(s)	862
Kzo9I	GATC	9 cut(s)	366, 514, 862, 991, 1362, 1527, 1627, 2056, 2526
LguI	GCTCTTC	1 cut(s)	1203
LmnI	GCTCC	3 cut(s)	582, 1724, 2371
Lsp1109I	GCAGC	7 cut(s)	31, 397, 979, 1093, 1096, 1163, 2203
LweI	GCATC	5 cut(s)	999, 1165, 1325, 1612, 1736
MaeI	CTAG	4 cut(s)	197, 1424, 1742, 2144
MaeIII	GTNAC	2 cut(s)	2146, 2239
MalI	GATC	9 cut(s)	368, 516, 864, 993, 1364, 1529, 1629, 2058, 2528
MboI	GATC	9 cut(s)	366, 514, 862, 991, 1362, 1527, 1627, 2056, 2526
MfeI	CAATTG	1 cut(s)	842
MflI	RGATCY	3 cut(s)	1362, 1527, 2056
MhlI	GDGCHC	5 cut(s)	579, 791, 841, 1721, 2389
MlyI	GAGTC	7 cut(s)	19, 45, 1347, 1732, 2156, 2328, 2350
MmeI	TCCRAC	2 cut(s)	565, 2008
MroI	TCCGGA	1 cut(s)	807
MroXI	GAANNNNTTC	2 cut(s)	2007, 2046
MslI	CAYNNNNRTG	2 cut(s)	685, 1515
MspI	CCGG	3 cut(s)	40, 808, 1893
MspR9I	CCNGG	4 cut(s)	581, 1420, 1455, 1827
MunI	CAATTG	1 cut(s)	842
Mva1269I	GAATGC	1 cut(s)	2302
MvaI	CCWGG	4 cut(s)	581, 1420, 1455, 1827
MwoI	GCNNNNNNNGC	6 cut(s)	786, 1118, 1429, 1898, 2252, 2384
NdeI	CATATG	1 cut(s)	1096
NdeII	GATC	9 cut(s)	366, 514, 862, 991, 1362, 1527, 1627, 2056, 2526
NheI	GCTAGC	1 cut(s)	1423
NlaIII	CATG	8 cut(s)	131, 211, 591, 684, 932, 1263, 1676, 1916
NlaIV	GGNNCC	2 cut(s)	1720, 1891
NspI	RCATGY	5 cut(s)	591, 684, 1263, 1676, 1916
PaeI	GCATGC	1 cut(s)	684
PagI	TCATGA	1 cut(s)	928
PciI	ACATGT	1 cut(s)	1912
PciSI	GCTCTTC	1 cut(s)	1203
PcsI	WCGNNNNNNNCGW	1 cut(s)	727
PctI	GAATGC	1 cut(s)	2302
PdmI	GAANNNNTTC	2 cut(s)	2007, 2046
PfeI	GAWTC	7 cut(s)	200, 230, 277, 647, 1220, 2140, 2486
PflMI	CCANNNNNTGG	1 cut(s)	1713
PinAI	ACCGGT	1 cut(s)	39
PkrI	GCNGC	8 cut(s)	21, 412, 969, 1108, 1111, 1153, 1779, 2218
Ple19I	CGATCG	1 cut(s)	2529
PleI	GAGTC	7 cut(s)	18, 45, 1347, 1732, 2156, 2328, 2350
PmaCI	CACGTG	1 cut(s)	1124
PmlI	CACGTG	1 cut(s)	1124
PpsI	GAGTC	7 cut(s)	18, 45, 1347, 1732, 2156, 2328, 2350
Ppu21I	YACGTR	3 cut(s)	564, 722, 1124
PpuMI	RGGWCCY	1 cut(s)	1451
PscI	ACATGT	1 cut(s)	1912
PshBI	ATTAAT	1 cut(s)	2442
Psp124BI	GAGCTC	1 cut(s)	2389
Psp1406I	AACGTT	3 cut(s)	268, 555, 1311
Psp5II	RGGWCCY	1 cut(s)	1451
Psp6I	CCWGG	4 cut(s)	579, 1418, 1453, 1825
PspCI	CACGTG	1 cut(s)	1124
PspGI	CCWGG	4 cut(s)	579, 1418, 1453, 1825
PspN4I	GGNNCC	2 cut(s)	1720, 1891
PspPI	GGNCC	3 cut(s)	1451, 1745, 1823
PspPPI	RGGWCCY	1 cut(s)	1451
PsuI	RGATCY	3 cut(s)	1362, 1527, 2056
PvuI	CGATCG	1 cut(s)	2529
RsaI	GTAC	5 cut(s)	212, 566, 821, 952, 1857
RsaNI	GTAC	5 cut(s)	211, 565, 820, 951, 1856
RseI	CAYNNNNRTG	2 cut(s)	685, 1515
SacI	GAGCTC	1 cut(s)	2389
SapI	GCTCTTC	1 cut(s)	1203
SatI	GCNGC	8 cut(s)	20, 411, 968, 1107, 1110, 1152, 1778, 2217
Sau3AI	GATC	9 cut(s)	366, 514, 862, 991, 1362, 1527, 1627, 2056, 2526
Sau96I	GGNCC	3 cut(s)	1451, 1745, 1823
SchI	GAGTC	7 cut(s)	19, 45, 1347, 1732, 2156, 2328, 2350
ScrFI	CCNGG	4 cut(s)	581, 1420, 1455, 1827
SduI	GDGCHC	5 cut(s)	579, 791, 841, 1721, 2389
SfaNI	GCATC	5 cut(s)	999, 1165, 1325, 1612, 1736
SfcI	CTRYAG	2 cut(s)	957, 1366
SinI	GGWCC	3 cut(s)	1451, 1745, 1823
SmiMI	CAYNNNNRTG	2 cut(s)	685, 1515
SmlI	CTYRAG	3 cut(s)	545, 2247, 2474
SmoI	CTYRAG	3 cut(s)	545, 2247, 2474
SphI	GCATGC	1 cut(s)	684
SsiI	CCGC	6 cut(s)	778, 943, 1777, 1918, 2082, 2219
SspI	AATATT	1 cut(s)	2110
SspMI	CTAG	4 cut(s)	197, 1424, 1742, 2144
SstI	GAGCTC	1 cut(s)	2389
StyD4I	CCNGG	4 cut(s)	579, 1418, 1453, 1825
StyI	CCWWGG	1 cut(s)	1722
TaaI	ACNGT	5 cut(s)	804, 890, 961, 1658, 1860
TaqI	TCGA	4 cut(s)	517, 1053, 1387, 2165
TatI	WGTACW	2 cut(s)	210, 819
TauI	GCSGC	1 cut(s)	1780
TfiI	GAWTC	7 cut(s)	200, 230, 277, 647, 1220, 2140, 2486
TscAI	CASTG	4 cut(s)	244, 613, 1177, 1663
TseI	GCWGC	7 cut(s)	19, 410, 967, 1106, 1109, 1151, 2216
TspGWI	ACGGA	4 cut(s)	1177, 1213, 2384, 2410
TspRI	CASTG	4 cut(s)	244, 613, 1177, 1663
Van91I	CCANNNNNTGG	1 cut(s)	1713
VpaK11BI	GGWCC	3 cut(s)	1451, 1745, 1823
VspI	ATTAAT	1 cut(s)	2442
XapI	RAATTY	2 cut(s)	975, 1754
XceI	RCATGY	5 cut(s)	591, 684, 1263, 1676, 1916
XmnI	GAANNNNTTC	2 cut(s)	2007, 2046
XspI	CTAG	4 cut(s)	197, 1424, 1742, 2144

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.