Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4B

Orthogroup ID

OG0001261

Physical Location & Seq

Genomic Coordinates Forward (+)

3348744 .. 3357657

Gene Structure 8914 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4BG021600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2487 bp

ATGATGCTGACATTCATCGTACTTCTCAGGAAATATATGCCCTGCCAGTTCTGGTGTATCCAATCTTCATCTTTACATGGGCGTAATTTCATAACTCCAAACAGAGGAAAAGGCAAGGTCAGGTCTCAAAAGACAGGCGATAGACTAGATTCCACCATGTACATAAATGTTGAAGCTGATTCGGACACTGAACTCCTTAGGATAGAACAAGTGAAACGTTCTCAGATTCACCAAGCTAAAGTCTTGATGGGATTGACGTGCTTATATATTCCACTTAGACTGGCAAAGCTAAATGTTGTTGATACTTTCATTAAGATCGTCCAAGAAAGACTTATCTGTGCTGTCCAAACTTTAGAGGCTGCCACGTTGCCTTTTGCCTGTGCTTCTAATTCTCTGAATAAGCCCAAGCCTCTTGGATTGGATGTGTTGTTGCAATCATTTCAAGATGTTAGATGGAGATTTGATCGATTGTTGTATCTTTTTAACGTCCAACTTGAGAAAAACGTTGCCACGTACTTCATAGTGCTCCTGGTAGCATGTGTCTCATTTGTTATCACTGGTGGTTTCCTATATTTCAAGTTTAGGGATAGTAAAGAATCTTTGGAGGACTGCTTCTGGGAAGCTTGGGCATGCCTATGTTCACCTCACACACATCTAAAGCAAAGAACACGTATTGAACGTGTTATTGGTTTCGTTCTTGCTATATGGGGCATATTATTTTACTCCCGCTTATTGAGCACAATGACTGAACAGTTCCGGAGTAATATGTACAAGCTCAGAGAAGGGGCACAATTGCAAGTTCTGGAGACTGATCACATCATTATTTGTGGAGTGAACAGTCATCTTCCTTTCATACTAAAGCAAATAAATAAGTATCATGAAGTTGCTGTCCGCTTAGGTACTGCTACAGTTAGGCAGCAAAGAATTCTTCTTATGTCTGATCTACCAAGAGAGCAGATGCACAAAAAAGTTGACGATATTGCCAAAGATTTTAACCATATCGATATCCTTACAAAAAGTTGTAGCCTGAGCTTAACCAAATCATATGAAAGAGCTGCTGCCAACAAGGCACGTGCCATAATCATACTGCCAAAAAGGGCAGCTCGGTATGAAGTTGACACTGATGCCTTTCTATCCGTTCTGGCTCTTCAACCTATTCCTAAGATGGAATCCGTCCCCACTATTGTTGAGGTTTCAAGTTCAAATACATGCGAGCTTTTGAAGTCAATCTCAGGGTTGAAAGTAGAGCCTGTGGAGAACGTTGCATCCAAATTATTTGTTCAATGCTCTCGTCAACAAGGACTCATAAAGATCTACAGACACTTGCTTAATTATCGAAAAAATGTGTTCAATCTTTGCAATTCTCCCAGGCTAGCAGGGCTGAAGTATAGTCAATTAGGACCTGGGTTTCAAGAGGCAGTTGTTTGTGGGCTTTATAGAAATGGGAAGATATACTTCCACCCAAATGATGATGAGATCTTGCAGGAAACTGACAAAGTATTGTTCATTTCACCTGTTAATAGGGGTAAGAAGCCTCCTATTACTAACTCAAATGTTAAAGAAATAAGTGATGCCGATCAAAGTTTGGAGGATGTAGAAAAGGACAGTGATACTCAATCACATGCCTTAAAATTAAGGAAAGAAAATACACGTCCCAAGAGATGGGGCTCCAAGGCATCAGACGGGACTCTAGGACCAACAGAATTTATACTTCTTCTTGGATGGCGGCCAGACGTTGTTGAGATGATTGACGAATATGACAATTATCTCGGACCTGGGAGTATTGTGGAGATATTATCAGATGTACCGTTAGATGACAGAAATAAGGCAAGAAGAGGTGCCGGTCAAGCCAAACTAAAACATGTGCGGGTTTCACATAGGATTGGAAACCCGATGAACTTTGACACTCTACAAGAAACCATAAGCAATATCCAACATTCTTTGAAGAATGAAGATATTCCCTTATCCATTGTTGTAATATGCGATGGAGAATGGCTTCTTGGAGATCCAAACAGGGCAGACAAGCAATCCGCCTTTTCCCTTCTTCTTGCTGAAAATATTTGCAACAAACTTGGCGTAAAGGTGCAGAATCTAGTTACAGAGATTGTGGACTCGAAATTGGGGAAACAAATCACAAGAATAAAGCCATCGCTGACTTATATTGCTGCGGAGGAAGTAATGAGCCTCGTAACAGCTCAAGTCGCTGTGGAAAGTGAACTAAATGAGGTGTGGAAAGACATTCTGAATGCAGAAGGTGATGAAATATATGTGAAGGATATCAGACTCTATATGAAAGAAGGAGAGACTCCATCCTTCACGGAGCTTGCTGAAAGAGCTCATTTACGGAAGGAAGTTGCCATAGGTTATGTGAAAAACAATAAGAAGGTTATTAATCCAGTTCCCAAGTCAGAACCCCTCTCCCTTGAGTTGACAGATTCGTTAATAGTTATATCTGAACTTGAAGGAGAACAACCGATCGTTTTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0031967 GO:0031975 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Castor_Poll_mid

Protein Analysis

828

Amino Acids

93.85

Weight (kDa)

8.54

Isoelectric Point (pI)

43.12

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Castor_Poll_mid	PF06241	419 - 517	1.8e-38	Castor and Pollux, part of voltage-gated ion channel

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0001261)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G02940 AT5G02940 AT5G43745
fragaria_vesca	FvH4_4g02230 FvH4_4g02230 FvH4_4g02230 FvH4_4g02230 FvH4_4g02230 FvH4_4g02230 FvH4_4g02230 FvH4_4g02230 FvH4_4g02230 FvH4_4g02230 FvH4_4g02230
malus_domestica	MD11G1069300.v1.1 MD13G1204000.v1.1 MD16G1206000.v1.1
prunus_persica	Prupe.1G027100_v2.0.a1 Prupe.1G027100_v2.0.a1 Prupe.1G027100_v2.0.a1
pyrus_communis	pycom11g05780 pycom13g17720
rosa_chinensis	RchiOBHm_Chr4g0389551 RchiOBHm_Chr4g0389561 RchiOBHm_Chr4g0389571 RchiOBHm_Chr4g0389581
rosa_laevigata	RLG00000009970 RLG00000009971 RLG00000009972
rosa_multiflora	Rmu_co8238337.1_g000001 Rmu_co8398985.1_g000001 Rmu_sc0010540.1_g000001 Rmu_ssc0000478.1_g000001 Rmu_ssc0000478.1_g000002 Rmu_ssc0000478.1_g000006
rosa_roxburghii	Rroxscaffold_5G00335510 Rroxscaffold_5G00335520 Rroxscaffold_5G00335530
rosa_rugosa	Rorug03G0324000
rosa_samantha	Rh2BG306500 Rh2CG284600 Rh4AG028300 Rh4AG028400 Rh4AG028500 Rh4BG021500 Rh4BG021600 Rh4BG021700 Rh4CG030500 Rh4CG030700 Rh4DG022100 Rh4DG022200 Rh4DG022300
rosa_wichuraiana	Rw4G002110 Rw4G002120 Rw4G002130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1838
AccB7I	CCANNNNNTGG	1 cut(s)	1662
AccIII	TCCGGA	1 cut(s)	756
AciI	CCGC	6 cut(s)	727, 892, 1726, 1867, 2031, 2168
AclI	AACGTT	3 cut(s)	217, 504, 1260
AclWI	GGATC	1 cut(s)	2000
AcoI	YGGCCR	1 cut(s)	1727
AcsI	RAATTY	2 cut(s)	924, 1703
AcuI	CTGAAG	1 cut(s)	1403
AcvI	CACGTG	1 cut(s)	1073
AfaI	GTAC	6 cut(s)	21, 161, 515, 770, 901, 1806
AfiI	CCNNNNNNNGG	2 cut(s)	104, 1662
AflIII	ACRYGT	4 cut(s)	668, 679, 1649, 1861
AjiI	CACGTC	2 cut(s)	258, 1652
AjnI	CCWGG	4 cut(s)	528, 1367, 1402, 1774
AjuI	GAANNNNNNNTTGG	4 cut(s)	669, 701, 1983, 2015
AloI	GAACNNNNNNTCC	2 cut(s)	1250, 1282
Alw21I	GWGCWC	3 cut(s)	528, 740, 2338
Alw26I	GTCTC	4 cut(s)	129, 547, 800, 2297
AlwI	GGATC	1 cut(s)	2000
Aor13HI	TCCGGA	1 cut(s)	756
AoxI	GGCC	1 cut(s)	1727
ApeKI	GCWGC	6 cut(s)	359, 916, 1055, 1058, 1100, 2165
ApoI	RAATTY	2 cut(s)	924, 1703
AseI	ATTAAT	1 cut(s)	2391
Asp700I	GAANNNNTTC	2 cut(s)	1956, 1995
AspS9I	GGNCC	3 cut(s)	1400, 1694, 1772
AsuHPI	GGTGA	4 cut(s)	221, 633, 1503, 2267
AsuNHI	GCTAGC	1 cut(s)	1372
AvaII	GGWCC	3 cut(s)	1400, 1694, 1772
AxyI	CCTNAGG	1 cut(s)	197
BaeGI	GKGCMC	1 cut(s)	790
BanI	GGYRCC	1 cut(s)	1838
BanII	GRGCYC	2 cut(s)	1670, 2338
BarI	GAAGNNNNNNTAC	2 cut(s)	49, 81
BbrPI	CACGTG	1 cut(s)	1073
Bbv12I	GWGCWC	3 cut(s)	528, 740, 2338
BbvI	GCAGC	6 cut(s)	346, 928, 1042, 1045, 1112, 2152
BccI	CCATC	8 cut(s)	241, 447, 1159, 1656, 1716, 1979, 2155, 2317
BciT130I	CCWGG	4 cut(s)	530, 1369, 1404, 1776
BciVI	GTATCC	1 cut(s)	68
BclI	TGATCA	1 cut(s)	811
BcoDI	GTCTC	4 cut(s)	129, 547, 800, 2297
BfaI	CTAG	4 cut(s)	146, 1373, 1691, 2093
BfmI	CTRYAG	2 cut(s)	906, 1315
BfuI	GTATCC	1 cut(s)	68
BglI	GCCNNNNNGGC	1 cut(s)	1067
BglII	AGATCT	2 cut(s)	1311, 1476
BisI	GCNGC	7 cut(s)	360, 917, 1056, 1059, 1101, 1727, 2166
BlsI	GCNGC	7 cut(s)	361, 918, 1057, 1060, 1102, 1728, 2167
Bme1390I	CCNGG	4 cut(s)	530, 1369, 1404, 1776
Bme18I	GGWCC	3 cut(s)	1400, 1694, 1772
BmgBI	CACGTC	2 cut(s)	258, 1652
BmgT120I	GGNCC	3 cut(s)	1400, 1694, 1772
BmiI	GGNNCC	2 cut(s)	1669, 1840
BmrFI	CCNGG	4 cut(s)	530, 1369, 1404, 1776
BmsI	GCATC	5 cut(s)	948, 1114, 1274, 1561, 1685
BmtI	GCTAGC	1 cut(s)	1376
BpmI	CTGGAG	1 cut(s)	824
Bpu10I	CCTNAGC	2 cut(s)	895, 1028
BpuEI	CTTGAG	3 cut(s)	515, 2181, 2444
Bsa29I	ATCGAT	2 cut(s)	466, 1002
BsaAI	YACGTR	3 cut(s)	513, 671, 1073
BsaBI	GATNNNNATC	1 cut(s)	1575
BsaI	GGTCTC	1 cut(s)	129
BsaJI	CCNNGG	4 cut(s)	1367, 1403, 1671, 1775
BsaWI	WCCGGW	1 cut(s)	756
Bsc4I	CCNNNNNNNGG	2 cut(s)	104, 1662
Bse118I	RCCGGY	1 cut(s)	1841
Bse1I	ACTGG	4 cut(s)	46, 285, 562, 2396
Bse21I	CCTNAGG	1 cut(s)	197
Bse8I	GATNNNNATC	1 cut(s)	1575
BseAI	TCCGGA	1 cut(s)	756
BseBI	CCWGG	4 cut(s)	530, 1369, 1404, 1776
BseCI	ATCGAT	2 cut(s)	466, 1002
BseDI	CCNNGG	4 cut(s)	1367, 1403, 1671, 1775
BseGI	GGATG	5 cut(s)	427, 1265, 1597, 1727, 2309
BseJI	GATNNNNATC	1 cut(s)	1575
BseLI	CCNNNNNNNGG	2 cut(s)	104, 1662
BseMII	CTCAG	5 cut(s)	40, 236, 790, 1019, 1245
BseNI	ACTGG	4 cut(s)	46, 285, 562, 2396
BseSI	GKGCMC	1 cut(s)	790
BseXI	GCAGC	6 cut(s)	346, 928, 1042, 1045, 1112, 2152
BsgI	GTGCAG	1 cut(s)	2105
Bsh1285I	CGRYCG	1 cut(s)	2478
BshFI	GGCC	1 cut(s)	1729
BshNI	GGYRCC	1 cut(s)	1838
BshVI	ATCGAT	2 cut(s)	466, 1002
BsiEI	CGRYCG	1 cut(s)	2478
BsiHKAI	GWGCWC	3 cut(s)	528, 740, 2338
BsiSI	CCGG	2 cut(s)	757, 1842
BslFI	GGGAC	3 cut(s)	1160, 1638, 1699
BslI	CCNNNNNNNGG	2 cut(s)	104, 1662
BsmAI	GTCTC	4 cut(s)	129, 547, 800, 2297
BsmFI	GGGAC	3 cut(s)	1160, 1638, 1699
BsmI	GAATGC	1 cut(s)	2251
BsnI	GGCC	1 cut(s)	1729
Bso31I	GGTCTC	1 cut(s)	129
Bsp1286I	GDGCHC	5 cut(s)	528, 740, 790, 1670, 2338
Bsp13I	TCCGGA	1 cut(s)	756
Bsp1407I	TGTACA	2 cut(s)	159, 768
Bsp143I	GATC	9 cut(s)	315, 463, 811, 940, 1311, 1476, 1576, 2005, 2475
BspACI	CCGC	6 cut(s)	727, 892, 1726, 1867, 2031, 2168
BspANI	GGCC	1 cut(s)	1729
BspCNI	CTCAG	5 cut(s)	39, 235, 789, 1020, 1244
BspDI	ATCGAT	2 cut(s)	466, 1002
BspEI	TCCGGA	1 cut(s)	756
BspHI	TCATGA	1 cut(s)	877
BspLI	GGNNCC	2 cut(s)	1669, 1840
BspOI	GCTAGC	1 cut(s)	1376
BspPI	GGATC	1 cut(s)	2000
BspQI	GCTCTTC	1 cut(s)	1152
BspT107I	GGYRCC	1 cut(s)	1838
BspTNI	GGTCTC	1 cut(s)	129
BsrFI	RCCGGY	1 cut(s)	1841
BsrGI	TGTACA	2 cut(s)	159, 768
BsrI	ACTGG	4 cut(s)	46, 285, 562, 2396
BssAI	RCCGGY	1 cut(s)	1841
BssECI	CCNNGG	4 cut(s)	1367, 1403, 1671, 1775
BssMI	GATC	9 cut(s)	315, 463, 811, 940, 1311, 1476, 1576, 2005, 2475
BssT1I	CCWWGG	1 cut(s)	1671
Bst2UI	CCWGG	4 cut(s)	530, 1369, 1404, 1776
Bst4CI	ACNGT	5 cut(s)	753, 839, 910, 1607, 1809
Bst6I	CTCTTC	2 cut(s)	1152, 1828
BstAUI	TGTACA	2 cut(s)	159, 768
BstBAI	YACGTR	3 cut(s)	513, 671, 1073
BstC8I	GCNNGC	4 cut(s)	631, 1214, 1374, 2325
BstDEI	CTNAG	9 cut(s)	26, 197, 222, 275, 776, 895, 1028, 1161, 1231
BstF5I	GGATG	5 cut(s)	427, 1265, 1597, 1727, 2309
BstKTI	GATC	9 cut(s)	318, 466, 814, 943, 1314, 1479, 1579, 2008, 2478
BstMAI	GTCTC	4 cut(s)	129, 547, 800, 2297
BstMBI	GATC	9 cut(s)	315, 463, 811, 940, 1311, 1476, 1576, 2005, 2475
BstMCI	CGRYCG	1 cut(s)	2478
BstMWI	GCNNNNNNNGC	6 cut(s)	735, 1067, 1378, 1847, 2201, 2333
BstNI	CCWGG	4 cut(s)	530, 1369, 1404, 1776
BstNSI	RCATGY	5 cut(s)	540, 633, 1212, 1625, 1865
BstSCI	CCNGG	4 cut(s)	528, 1367, 1402, 1774
BstSFI	CTRYAG	2 cut(s)	906, 1315
BstSLI	GKGCMC	1 cut(s)	790
BstV1I	GCAGC	6 cut(s)	346, 928, 1042, 1045, 1112, 2152
BstX2I	RGATCY	3 cut(s)	1311, 1476, 2005
BstYI	RGATCY	3 cut(s)	1311, 1476, 2005
Bsu15I	ATCGAT	2 cut(s)	466, 1002
Bsu36I	CCTNAGG	1 cut(s)	197
BsuI	GTATCC	1 cut(s)	68
BsuRI	GGCC	1 cut(s)	1729
BsuTUI	ATCGAT	2 cut(s)	466, 1002
BtgZI	GCGATG	2 cut(s)	1998, 2133
BtrI	CACGTC	2 cut(s)	258, 1652
BtsCI	GGATG	5 cut(s)	427, 1265, 1597, 1727, 2309
BtsIMutI	CAGTG	4 cut(s)	186, 555, 1119, 1612
Cac8I	GCNNGC	4 cut(s)	631, 1214, 1374, 2325
CciI	TCATGA	1 cut(s)	877
Cfr10I	RCCGGY	1 cut(s)	1841
Cfr13I	GGNCC	3 cut(s)	1400, 1694, 1772
ClaI	ATCGAT	2 cut(s)	466, 1002
Csp6I	GTAC	6 cut(s)	20, 160, 514, 769, 900, 1805
CspCI	CAANNNNNGTGG	2 cut(s)	1168, 1203
CviAII	CATG	8 cut(s)	77, 157, 537, 630, 878, 1209, 1622, 1862
CviQI	GTAC	6 cut(s)	20, 160, 514, 769, 900, 1805
DdeI	CTNAG	9 cut(s)	26, 197, 222, 275, 776, 895, 1028, 1161, 1231
DpnI	GATC	9 cut(s)	317, 465, 813, 942, 1313, 1478, 1578, 2007, 2477
DpnII	GATC	9 cut(s)	315, 463, 811, 940, 1311, 1476, 1576, 2005, 2475
EaeI	YGGCCR	1 cut(s)	1727
Eam1104I	CTCTTC	2 cut(s)	1152, 1828
EarI	CTCTTC	2 cut(s)	1152, 1828
EciI	GGCGGA	1 cut(s)	2020
Ecl136II	GAGCTC	1 cut(s)	2336
Eco130I	CCWWGG	1 cut(s)	1671
Eco24I	GRGCYC	2 cut(s)	1670, 2338
Eco31I	GGTCTC	1 cut(s)	129
Eco32I	GATATC	2 cut(s)	1006, 2278
Eco47I	GGWCC	3 cut(s)	1400, 1694, 1772
Eco53kI	GAGCTC	1 cut(s)	2336
Eco57I	CTGAAG	1 cut(s)	1403
Eco72I	CACGTG	1 cut(s)	1073
Eco81I	CCTNAGG	1 cut(s)	197
EcoICRI	GAGCTC	1 cut(s)	2336
EcoO109I	RGGNCCY	1 cut(s)	1400
EcoRI	GAATTC	1 cut(s)	924
EcoRII	CCWGG	4 cut(s)	528, 1367, 1402, 1774
EcoRV	GATATC	2 cut(s)	1006, 2278
EcoT14I	CCWWGG	1 cut(s)	1671
EcoT38I	GRGCYC	2 cut(s)	1670, 2338
ErhI	CCWWGG	1 cut(s)	1671
FaeI	CATG	8 cut(s)	80, 160, 540, 633, 881, 1212, 1625, 1865
FalI	AAGNNNNNCTT	4 cut(s)	315, 347, 1439, 1471
FaqI	GGGAC	3 cut(s)	1160, 1638, 1699
FatI	CATG	8 cut(s)	76, 156, 536, 629, 877, 1208, 1621, 1861
FauI	CCCGC	2 cut(s)	734, 1860
FauNDI	CATATG	1 cut(s)	1045
FbaI	TGATCA	1 cut(s)	811
Fnu4HI	GCNGC	7 cut(s)	360, 917, 1056, 1059, 1101, 1727, 2166
FokI	GGATG	5 cut(s)	434, 1252, 1604, 1734, 2296
FriOI	GRGCYC	2 cut(s)	1670, 2338
Fsp4HI	GCNGC	7 cut(s)	360, 917, 1056, 1059, 1101, 1727, 2166
FspBI	CTAG	4 cut(s)	146, 1373, 1691, 2093
GluI	GCNGC	7 cut(s)	360, 917, 1056, 1059, 1101, 1727, 2166
GsuI	CTGGAG	1 cut(s)	824
HaeIII	GGCC	1 cut(s)	1729
HapII	CCGG	2 cut(s)	757, 1842
Hin1II	CATG	8 cut(s)	80, 160, 540, 633, 881, 1212, 1625, 1865
HincII	GTYRAC	4 cut(s)	973, 1117, 1295, 2430
HindII	GTYRAC	4 cut(s)	973, 1117, 1295, 2430
HindIII	AAGCTT	1 cut(s)	621
HpaII	CCGG	2 cut(s)	757, 1842
HphI	GGTGA	4 cut(s)	221, 633, 1503, 2267
Hpy166II	GTNNAC	8 cut(s)	641, 835, 973, 1117, 1295, 2110, 2216, 2430
Hpy188III	TCNNGA	7 cut(s)	28, 244, 443, 757, 803, 878, 1412
Hpy8I	GTNNAC	8 cut(s)	641, 835, 973, 1117, 1295, 2110, 2216, 2430
HpyAV	CCTTC	9 cut(s)	776, 2051, 2246, 2266, 2291, 2323, 2341, 2377, 2456
HpyCH4III	ACNGT	5 cut(s)	753, 839, 910, 1607, 1809
HpyCH4V	TGCA	9 cut(s)	433, 796, 961, 1265, 1359, 1483, 2064, 2086, 2249
HpyF10VI	GCNNNNNNNGC	6 cut(s)	735, 1067, 1378, 1847, 2201, 2333
HpyF3I	CTNAG	9 cut(s)	26, 197, 222, 275, 776, 895, 1028, 1161, 1231
Hsp92II	CATG	8 cut(s)	80, 160, 540, 633, 881, 1212, 1625, 1865
Kpn2I	TCCGGA	1 cut(s)	756
Ksp22I	TGATCA	1 cut(s)	811
Kzo9I	GATC	9 cut(s)	315, 463, 811, 940, 1311, 1476, 1576, 2005, 2475
LguI	GCTCTTC	1 cut(s)	1152
LmnI	GCTCC	3 cut(s)	531, 1673, 2320
Lsp1109I	GCAGC	6 cut(s)	346, 928, 1042, 1045, 1112, 2152
LweI	GCATC	5 cut(s)	948, 1114, 1274, 1561, 1685
MaeI	CTAG	4 cut(s)	146, 1373, 1691, 2093
MaeIII	GTNAC	2 cut(s)	2095, 2188
MalI	GATC	9 cut(s)	317, 465, 813, 942, 1313, 1478, 1578, 2007, 2477
MboI	GATC	9 cut(s)	315, 463, 811, 940, 1311, 1476, 1576, 2005, 2475
MfeI	CAATTG	1 cut(s)	791
MflI	RGATCY	3 cut(s)	1311, 1476, 2005
MhlI	GDGCHC	5 cut(s)	528, 740, 790, 1670, 2338
MlyI	GAGTC	5 cut(s)	1296, 1681, 2105, 2277, 2299
MmeI	TCCRAC	2 cut(s)	514, 1957
MroI	TCCGGA	1 cut(s)	756
MroXI	GAANNNNTTC	2 cut(s)	1956, 1995
MslI	CAYNNNNRTG	2 cut(s)	634, 1464
MspI	CCGG	2 cut(s)	757, 1842
MspR9I	CCNGG	4 cut(s)	530, 1369, 1404, 1776
MunI	CAATTG	1 cut(s)	791
Mva1269I	GAATGC	1 cut(s)	2251
MvaI	CCWGG	4 cut(s)	530, 1369, 1404, 1776
MwoI	GCNNNNNNNGC	6 cut(s)	735, 1067, 1378, 1847, 2201, 2333
NdeI	CATATG	1 cut(s)	1045
NdeII	GATC	9 cut(s)	315, 463, 811, 940, 1311, 1476, 1576, 2005, 2475
NheI	GCTAGC	1 cut(s)	1372
NlaIII	CATG	8 cut(s)	80, 160, 540, 633, 881, 1212, 1625, 1865
NlaIV	GGNNCC	2 cut(s)	1669, 1840
NspI	RCATGY	5 cut(s)	540, 633, 1212, 1625, 1865
PaeI	GCATGC	1 cut(s)	633
PagI	TCATGA	1 cut(s)	877
PciI	ACATGT	1 cut(s)	1861
PciSI	GCTCTTC	1 cut(s)	1152
PcsI	WCGNNNNNNNCGW	1 cut(s)	676
PctI	GAATGC	1 cut(s)	2251
PdmI	GAANNNNTTC	2 cut(s)	1956, 1995
PfeI	GAWTC	7 cut(s)	149, 179, 226, 596, 1169, 2089, 2435
PflMI	CCANNNNNTGG	1 cut(s)	1662
PkrI	GCNGC	7 cut(s)	361, 918, 1057, 1060, 1102, 1728, 2167
Ple19I	CGATCG	1 cut(s)	2478
PleI	GAGTC	5 cut(s)	1296, 1681, 2105, 2277, 2299
PmaCI	CACGTG	1 cut(s)	1073
PmlI	CACGTG	1 cut(s)	1073
PpsI	GAGTC	5 cut(s)	1296, 1681, 2105, 2277, 2299
Ppu21I	YACGTR	3 cut(s)	513, 671, 1073
PpuMI	RGGWCCY	1 cut(s)	1400
PscI	ACATGT	1 cut(s)	1861
PshBI	ATTAAT	1 cut(s)	2391
Psp124BI	GAGCTC	1 cut(s)	2338
Psp1406I	AACGTT	3 cut(s)	217, 504, 1260
Psp5II	RGGWCCY	1 cut(s)	1400
Psp6I	CCWGG	4 cut(s)	528, 1367, 1402, 1774
PspCI	CACGTG	1 cut(s)	1073
PspGI	CCWGG	4 cut(s)	528, 1367, 1402, 1774
PspN4I	GGNNCC	2 cut(s)	1669, 1840
PspPI	GGNCC	3 cut(s)	1400, 1694, 1772
PspPPI	RGGWCCY	1 cut(s)	1400
PsuI	RGATCY	3 cut(s)	1311, 1476, 2005
PvuI	CGATCG	1 cut(s)	2478
RsaI	GTAC	6 cut(s)	21, 161, 515, 770, 901, 1806
RsaNI	GTAC	6 cut(s)	20, 160, 514, 769, 900, 1805
RseI	CAYNNNNRTG	2 cut(s)	634, 1464
SacI	GAGCTC	1 cut(s)	2338
SapI	GCTCTTC	1 cut(s)	1152
SatI	GCNGC	7 cut(s)	360, 917, 1056, 1059, 1101, 1727, 2166
Sau3AI	GATC	9 cut(s)	315, 463, 811, 940, 1311, 1476, 1576, 2005, 2475
Sau96I	GGNCC	3 cut(s)	1400, 1694, 1772
SchI	GAGTC	5 cut(s)	1296, 1681, 2105, 2277, 2299
ScrFI	CCNGG	4 cut(s)	530, 1369, 1404, 1776
SduI	GDGCHC	5 cut(s)	528, 740, 790, 1670, 2338
SfaNI	GCATC	5 cut(s)	948, 1114, 1274, 1561, 1685
SfcI	CTRYAG	2 cut(s)	906, 1315
SinI	GGWCC	3 cut(s)	1400, 1694, 1772
SmiMI	CAYNNNNRTG	2 cut(s)	634, 1464
SmlI	CTYRAG	3 cut(s)	494, 2196, 2423
SmoI	CTYRAG	3 cut(s)	494, 2196, 2423
SphI	GCATGC	1 cut(s)	633
SsiI	CCGC	6 cut(s)	727, 892, 1726, 1867, 2031, 2168
SspI	AATATT	1 cut(s)	2059
SspMI	CTAG	4 cut(s)	146, 1373, 1691, 2093
SstI	GAGCTC	1 cut(s)	2338
StyD4I	CCNGG	4 cut(s)	528, 1367, 1402, 1774
StyI	CCWWGG	1 cut(s)	1671
TaaI	ACNGT	5 cut(s)	753, 839, 910, 1607, 1809
TaqI	TCGA	4 cut(s)	466, 1002, 1336, 2114
TatI	WGTACW	2 cut(s)	159, 768
TauI	GCSGC	1 cut(s)	1729
TfiI	GAWTC	7 cut(s)	149, 179, 226, 596, 1169, 2089, 2435
TscAI	CASTG	4 cut(s)	193, 562, 1126, 1612
TseI	GCWGC	6 cut(s)	359, 916, 1055, 1058, 1100, 2165
TspGWI	ACGGA	4 cut(s)	1126, 1162, 2333, 2359
TspRI	CASTG	4 cut(s)	193, 562, 1126, 1612
Van91I	CCANNNNNTGG	1 cut(s)	1662
VpaK11BI	GGWCC	3 cut(s)	1400, 1694, 1772
VspI	ATTAAT	1 cut(s)	2391
XapI	RAATTY	2 cut(s)	924, 1703
XceI	RCATGY	5 cut(s)	540, 633, 1212, 1625, 1865
XmnI	GAANNNNTTC	2 cut(s)	1956, 1995
XspI	CTAG	4 cut(s)	146, 1373, 1691, 2093

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.