FvH4_1g12901

Auxilin-like protein 1

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
Physical Location & Seq
Reverse (-)
7129398 .. 7136870
7473 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g12901.t6

Sequence Viewer

Length: 4536 bp
ATGGACAACCTCTCCCATTCTCGCCGCCCCAACCCCAAAGTGATCACCAATGGCGGCGGCGGCGGCTTCCTCGCCAAGACCCTCTACGACGACGTCTACGGCGGCCCTCCCAAGTTCGGCCTCTCCTCCTCCTCCTGCTCCTCCCTCTCGCCGCGCCTCGAGGACTACAGCGAGATATTCGGCGCGTTCAGCGGCTCACGCGCCTCCTCGATTCCCGTGCTCGAGCTCCCCGTCGCCGACGACGACGAGAATGACGAGTTTTTCGATGTGCGGAGCTCCGGGTTTGACTACTCCGAGGTGTTCGGAGGCTTCGACGGCCTGGATTTCGCCGTCGCCTACGACGACCTGGTCAAGCAGAAACACGACGGCGCCGGCGACGGTGATTCCTCCGACGAAGCTTGGACTCCAGAAGGATCTGGGTCTGTCTCAGGAGAGTCGAATCATTCGTTGAAGAACCAGATCTTTTCAGACGGAGATCCTTACTATTCATTTGATGGCAGCTCTGAGTTTGGCATTTCATATAACAAGGCTCATAAAAAAAACAATAAAGAATCTTTGAATGGGAGGACTCATGCAAATCTGGTACCTGCTGCTAGTGCATACAGATATATGCCAGATGAAATTACTCCCGTGCGACAGACAAAATTCGACAATCCAAGCTTGCAGGTGACTGATGATAGAAAGTGCAATATGTACTCTAATGTGGAAATGGTAAATGAAAAGCATCTCAGAAAGACTGTGTCACTTCCCTTTAATGGTAGTTCAGCCGAACAGGCTTATGGAGACAGCCAGAAACCTGAAAGAGGATCTGGTAGAAATGGTTCTCGTCATAAAGAGCCATTTGTAACTATATCAGATATAAATCTCAGGACTCAGCCCTCTCATTTGCCACCACCTTGTCGGCCGCCGCCCATATTTGATGGCAACAGTGGAGATTCTGGTAGACTGTCTTCCAATTCTAACACCATTTCGTCTGATGAGAGATCAGGTGATATTTCACCCCCTTTCTTTGATGTAGAGGTAGATGCAAGTTCATCTGCTGCAGTGTCTGCGGCAGCTATGAAAGAAGCAATGGAGAAAGCTAGAATACAATTGAGAAGTGCAAAGGAGTTAATGCAGAGGAAGAAAGAGGGTTCTCATAGCCGTTCAAAATCCCGGTCAAAGAAAGAAAATAAAGAGGAAGGAAAGGTGGGTAAGTTTGATGATGGTTCCAGCAGTAAGAAAGACGATAGAGTCCGGGGAACTTCTGAGAGAGAAGATAGTAGAATGAAATTTGCTGTTAGTGAGGAAAAGCAGAAGGCTTTGAAGAAAGTCAGAGAAGATCCAGAATCTTTAAGAGATGAAAAATCTTTGGAGGCAGCTAAAACTCTTGTTCAGGAGAAGCATGCGAAGGAATCCTGGTCATCTCAGCGGTCTTTCCAAATTGATGAAGCTAGTGAATGGCAAGAAGCAACACAGTATTTTGAATTGGTGGCATTAGTTGACACCAAGAAAGCTTTTGAGCTAGCAAATAAAGATAAGAATTTGGTTCAGACTGCAAAAGCTGATAAAAAAGTTAGTGCCGTTATTGAAGTTCATGATCCAGAAGATCTAGAGAAGAAACGTCGTGAATTGGAGGAATGCAATGCAAGATCAAAAGATGCTAAAGAGTCACGGGGGTGGAAAGAGCATGAGAAAATGGTAAAAGTGACTCGAGAAACTTTTGAGAAGGGGGAGAATGGGTTGAGTTTGGGAACAGGCAAGCTGCCTGCAGAGTCTGTGAAGCAAAGAGGCAGATCTGCGAAATCAGAGAAGTATGACAATATGGCAGAGATTCAAGGTAAAGAAAATAAGTTCAATGTTGAAAATGCTATGCAGCAGAAGGACAATGAAGTGAAATTAAAAGAAAATGATAAAGCAATTAGAATCGAGGAAAGACATAAGGAATCTCATGGAAGAGAAGGCATTGAGAACAGACAAAAGTCTTTGGAGCAGGAAGAGAATGAAAGAAGGCTCGAGGAGGCGTTAAAACAAGCTGAAAATGAGCGGAGACTGAAGGAGGTTCTTGAGAAGGAAGAAAATGAGAAAAGGTTAAAGGAGGCCCAAGAGCAGGTAGAAAATGAGAAGAGGCTGAAAAGGGCTCTAGAGTTGCAAGAGAATGAGAAGAAATTAAAGGAGGCTCTCGAACAAGAAAACAAAAAGAGACAGAAAGAGGCTGCTCAAAGAGAAGAAAATGAGAAGAGACTTAAGGAGGTTCTTGAGAAGGAAGAAATCAAGAAGAGGTTAAAGGAAGAAAATGAGGAGAGGCTGAAAAAGGCTCTAGAGTTGCAAGAGAATGAGAAGAGAATAAAGGAGGCTCTCGAACAAGAAAACAAAAAGGGACAGAAAGAGGCTGCTCAAAGAGAAGAAAATGAGAAGCGGCTAAAAGAAGCTCTTGAGTTTGAAGAATATCAGAAGAGACAAAAGGATGGCCGTGAAAGAGAGGAAAATGAGCGCAGGCTTAAAATGGCTCATGCTCGTGAGCAGCAGTACGCCATAAACAGATTGAAGGAGTCTCAGGAAAAAGCATATAAGCAGGCGGAAATTCAGCAAAAGTTAGATGAGGCTAGTGTGTCGGAAGAGACCAAGAAGAATATTTTAGTTGCTGATGACAGGGAAGAAGTGGAAGTCCTAAACAAAACGCAAAAGGGAACAGAGAGAAATGAGAATGTTCAGGAACTCAGGTCGGTTAAAGGAACCCATTTGCCCATGGAAGAAGTAGAGGATCACAAGTTATCTGATGAGACATGCAACCAGGATTGCAATGAGAACTTTCAAGCAACTCAAATAGCAAGAAACCATGATGAAAACAGTGAAACAATGAAGGAATATCAAGAGGTGCATGCTCATGAAGAAAATGGAAAGAAAAAGTCCAACAACAAACATAGTGATACAATGTCAGGTCCAGAAGTTGTTGAACCAGTAAAGGTGTCTCTTGATTTAGAAAACAAAGAGAAGCAGTTCAGAAGGAAAAATGCTGATGAATCTCTTCCCTTAGATCCCTCTGTGAAGAAAACAAAGGAAGAAATTATTGCTGAACCTTGCATTAGGAAAGGAGAAATGGGGGGAGTTAAAATGACAAATGGGCCGGTTGATGAGCAGTTCAAAGCATCTTGCTTATCTGGCTTGGCCCAAGTAGGCACAGAATCTGGAAAGAGCTATTTCAGAATGGATGATGCCTATGAGTTGATTCCTTTTGTCAACTTTGTGAAGAAAGCAGTAGAAGCTAGCTCTGGCACTGAAATACCACAGCCAAAATTCAATAGTACCTCTCAGAAGGACTTTGATCATGAAACCCAAAAGATGGAAGGTGCCCAGGAATGGAAAGAGAGAGAAAAGGACTCGAAGCAAGTCCATGCTTCCTCAAATCGGGAAGAAAACTTGGCAGCCGAACCTGTGAAAGAGTTTGTTGACAGTAGAAGGAAAACAGAAGCAGCTTATCCAGCTATGGCAGAAATAAACAACCGGAAATCATCTCAGCAAGTTAATGCAAGCCAGGCACCGGGGAGGAAAGTCAATAATCTTAGAGAAGACCCACTAAATGGGGAGAAAGAAACAGAAAAGTTGAAAAGAGAAAGAGAGCTTGAAAATGATCGCCTTAGGAAGATTGAGGAAGAAAGAGAAAGGGAGAGGGAAAGAGAAAAGGACAGGATGGCTGTTGACAGGGCAACACTTGAAGCTCGCGACTGGGCGTACGTGGAAGCTCGTGAGAGAGCAGAAAGGGTTGCTTTAGAGAGAGCAACAGCTGACGCTCGACAAAGAGCAATGGCAGAGGCTCGTGAAAGATTAGAGAAAGCATGTGCAGAGGCCAGGGAGAAGTCATTAGCAGGGAAGGCAGCTATGGAGGCCAGGCTCAAGGCAGAGCGTGCTGCAGTGGAGAGGGCAACTGCAGAGGCTCGAGAGCGTGCTGCAGAAAAGCTAATGGCTGAAAGGGAACGAGTACAGAGATCTGTTTCTGACAAATTTAGTGTGTCTTCTAGAAATAACGGGTTGAGACATTGCTCTTCATCCTCGGATCTTCAGGACCCACAGAAACCAAGACACCCATATTCTACAGCTTATGGTGAGAGATATGAAGGAGAGGAAGGTGAATCAGCTCAAAGGTGTAAGGCTAGACTAGAGAGACATGCTAGAACAGCTGAACGAGCGGCAAAAGCTCTGGCGGAGAAGAATATGCGTGATCTTCTTGCACAAAGAGAGCAAGCAGAGAGAAATAGATTAGCCGAGACTCTGGATGCAGATGTCAAGCGGTGGTCAAGCGGAAAAGAAGGGAACTTGCGTGCCTTACTTTCGACTTTACAATATATCCTTGGGTCTGATAGTGGTTGGCAGCCTATTCCCTTGACAGAAGTGATAACTGCTGCTGCTGTAAAGAAAGCTTACAGGAAAGCCACTCTCTGTGTTCATCCTGACAAATTACAACAACGTGGTGCCAGTATTCATCAGAAGTACATATGTGAAAAAGTTTTCGATCTTCTAAAGGAAGCTTGGAACAAATTCAACTCAGAAGAGCGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1512

Amino Acids

172.35

Weight (kDa)

6.08

Isoelectric Point (pI)

49.11

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 655
AasI GACNNNNNNGTC 2 cut(s) 347, 1232
AatII GACGTC 1 cut(s) 96
AbsI CCTCGAGG 1 cut(s) 158
Acc36I ACCTGC 3 cut(s) 595, 655, 2080
Acc65I GGTACC 1 cut(s) 583
AccB1I GGYRCC 5 cut(s) 368, 583, 3329, 3517, 4448
AccB7I CCANNNNNTGG 2 cut(s) 3322, 3560
AccBSI CCGCTC 3 cut(s) 2026, 4166, 4531
AccI GTMKAC 2 cut(s) 96, 943
AccII CGCG 4 cut(s) 154, 185, 201, 3702
AclWI GGATC 8 cut(s) 421, 470, 814, 1316, 1574, 2751, 3011, 4041
AcoI YGGCCR 2 cut(s) 902, 2449
AcsI RAATTY 7 cut(s) 644, 1271, 1522, 2562, 3275, 3980, 4514
AcuI CTGAAG 2 cut(s) 2054, 4022
AcyI GRCGYC 2 cut(s) 93, 369
AfaI GTAC 7 cut(s) 585, 695, 2510, 3286, 3713, 3960, 4469
AfiI CCNNNNNNNGG 9 cut(s) 116, 755, 803, 2089, 3322, 3339, 3387, 3520, 3560
AflII CTTAAG 1 cut(s) 2225
AjnI CCWGG 8 cut(s) 318, 345, 1397, 2772, 3333, 3513, 3827, 3866
AleI CACNNNNGTG 1 cut(s) 1657
Alw21I GWGCWC 3 cut(s) 222, 228, 278
AlwI GGATC 8 cut(s) 421, 470, 814, 1316, 1574, 2751, 3011, 4041
AlwNI CAGNNNCTG 3 cut(s) 1049, 1757, 3167
Ama87I CYCGRG 5 cut(s) 158, 221, 1692, 1994, 3915
ApoI RAATTY 7 cut(s) 644, 1271, 1522, 2562, 3275, 3980, 4514
ArsI GACNNNNNNTTYG 4 cut(s) 245, 277, 1142, 1174
Asp700I GAANNNNTTC 4 cut(s) 820, 2978, 3006, 4514
Asp718I GGTACC 1 cut(s) 583
AspLEI GCGC 5 cut(s) 156, 185, 203, 371, 2475
AspS9I GGNCC 6 cut(s) 104, 2080, 2921, 3104, 3148, 4042
AsuC2I CCSGG 4 cut(s) 280, 1156, 1238, 3522
AsuHPI GGTGA 7 cut(s) 37, 392, 679, 990, 1001, 4094, 4118
AsuNHI GCTAGC 2 cut(s) 1504, 3245
AvaI CYCGRG 5 cut(s) 158, 221, 1692, 1994, 3915
AvaII GGWCC 2 cut(s) 2921, 4042
AxyI CCTNAGG 1 cut(s) 3617
BaeGI GKGCMC 1 cut(s) 3334
BanI GGYRCC 5 cut(s) 368, 583, 3329, 3517, 4448
BanII GRGCYC 3 cut(s) 228, 278, 2122
BarI GAAGNNNNNNTAC 2 cut(s) 934, 966
BauI CACGAG 3 cut(s) 2496, 3723, 3795
BbsI GAAGAC 3 cut(s) 942, 3555, 3984
Bbv12I GWGCWC 3 cut(s) 222, 228, 278
BccI CCATC 6 cut(s) 488, 914, 1199, 2441, 3316, 3664
BceAI ACGGC 7 cut(s) 115, 314, 331, 382, 1128, 1547, 2436
BcgI CGANNNNNNTGC 2 cut(s) 199, 233
BciT130I CCWGG 8 cut(s) 320, 347, 1399, 2774, 3335, 3515, 3829, 3868
BclI TGATCA 2 cut(s) 42, 3304
BcnI CCSGG 4 cut(s) 280, 1156, 1238, 3522
BfmI CTRYAG 7 cut(s) 166, 1041, 1749, 3888, 3906, 3927, 4071
BfoI RGCGCY 1 cut(s) 372
BfrI CTTAAG 1 cut(s) 2225
BfuAI ACCTGC 3 cut(s) 595, 655, 2080
BglI GCCNNNNNGGC 1 cut(s) 773
BglII AGATCT 4 cut(s) 459, 1588, 1775, 3965
Bme18I GGWCC 2 cut(s) 2921, 4042
BmeT110I CYCGRG 5 cut(s) 158, 221, 1692, 1994, 3915
BmgT120I GGNCC 6 cut(s) 104, 2080, 2921, 3104, 3148, 4042
BmiI GGNNCC 8 cut(s) 370, 585, 1210, 2716, 3331, 3519, 4044, 4450
BmrI ACTGGG 1 cut(s) 3715
BmsI GCATC 6 cut(s) 733, 1015, 1630, 3137, 3184, 4243
BmtI GCTAGC 2 cut(s) 1508, 3249
BmuI ACTGGG 1 cut(s) 3715
BoxI GACNNNNGTC 1 cut(s) 1960
BpiI GAAGAC 3 cut(s) 942, 3555, 3984
BpmI CTGGAG 1 cut(s) 390
BpuEI CTTGAG 4 cut(s) 2066, 2258, 2435, 3857
BpuMI CCSGG 4 cut(s) 280, 1156, 1238, 3522
BsaAI YACGTR 1 cut(s) 3715
BsaBI GATNNNNATC 1 cut(s) 861
BsaHI GRCGYC 2 cut(s) 93, 369
BsaI GGTCTC 1 cut(s) 2594
BsaJI CCNNGG 8 cut(s) 294, 1237, 2727, 3333, 3521, 3828, 4029, 4327
BsaWI WCCGGW 1 cut(s) 3483
BsaXI ACNNNNNCTCC 3 cut(s) 26, 1706, 1736
Bsc4I CCNNNNNNNGG 9 cut(s) 116, 755, 803, 2089, 3322, 3339, 3387, 3520, 3560
Bse118I RCCGGY 2 cut(s) 371, 3106
Bse1I ACTGG 3 cut(s) 2939, 3710, 4452
Bse21I CCTNAGG 1 cut(s) 3617
Bse3DI GCAATG 5 cut(s) 1077, 1630, 2788, 3789, 4015
Bse8I GATNNNNATC 1 cut(s) 861
BseBI CCWGG 8 cut(s) 320, 347, 1399, 2774, 3335, 3515, 3829, 3868
BseDI CCNNGG 8 cut(s) 294, 1237, 2727, 3333, 3521, 3828, 4029, 4327
BseGI GGATG 6 cut(s) 2452, 3196, 3675, 4025, 4258, 4423
BseJI GATNNNNATC 1 cut(s) 861
BseLI CCNNNNNNNGG 9 cut(s) 116, 755, 803, 2089, 3322, 3339, 3387, 3520, 3560
BseMI GCAATG 5 cut(s) 1077, 1630, 2788, 3789, 4015
BseNI ACTGG 3 cut(s) 2939, 3710, 4452
BseRI GAGGAG 7 cut(s) 115, 118, 121, 130, 196, 2012, 2294
BseSI GKGCMC 1 cut(s) 3334
BseX3I CGGCCG 1 cut(s) 902
BsgI GTGCAG 1 cut(s) 3840
Bsh1236I CGCG 4 cut(s) 154, 185, 201, 3702
Bsh1285I CGRYCG 1 cut(s) 905
BshNI GGYRCC 5 cut(s) 368, 583, 3329, 3517, 4448
BsiEI CGRYCG 1 cut(s) 905
BsiHKAI GWGCWC 3 cut(s) 222, 228, 278
BsiHKCI CYCGRG 5 cut(s) 158, 221, 1692, 1994, 3915
BsiSI CCGG 7 cut(s) 279, 372, 1156, 1237, 3107, 3484, 3521
BsiWI CGTACG 1 cut(s) 3711
BslFI GGGAC 1 cut(s) 2373
BslI CCNNNNNNNGG 9 cut(s) 116, 755, 803, 2089, 3322, 3339, 3387, 3520, 3560
BsmFI GGGAC 1 cut(s) 2373
BsmI GAATGC 1 cut(s) 1625
Bso31I GGTCTC 1 cut(s) 2594
BsoBI CYCGRG 5 cut(s) 158, 221, 1692, 1994, 3915
Bsp1286I GDGCHC 5 cut(s) 222, 228, 278, 2122, 3334
Bsp19I CCATGG 1 cut(s) 2727
Bsp68I TCGCGA 1 cut(s) 3702
BspFNI CGCG 4 cut(s) 154, 185, 201, 3702
BspHI TCATGA 3 cut(s) 1576, 2866, 3307
BspLI GGNNCC 8 cut(s) 370, 585, 1210, 2716, 3331, 3519, 4044, 4450
BspMAI CTGCAG 5 cut(s) 1045, 1753, 3892, 3910, 3931
BspMI ACCTGC 3 cut(s) 595, 655, 2080
BspOI GCTAGC 2 cut(s) 1508, 3249
BspPI GGATC 8 cut(s) 421, 470, 814, 1316, 1574, 2751, 3011, 4041
BspQI GCTCTTC 2 cut(s) 4027, 4521
BspT107I GGYRCC 5 cut(s) 368, 583, 3329, 3517, 4448
BspTI CTTAAG 1 cut(s) 2225
BspTNI GGTCTC 1 cut(s) 2594
BsrBI CCGCTC 3 cut(s) 2026, 4166, 4531
BsrDI GCAATG 5 cut(s) 1077, 1630, 2788, 3789, 4015
BsrFI RCCGGY 2 cut(s) 371, 3106
BsrI ACTGG 3 cut(s) 2939, 3710, 4452
BssAI RCCGGY 2 cut(s) 371, 3106
BssECI CCNNGG 8 cut(s) 294, 1237, 2727, 3333, 3521, 3828, 4029, 4327
BssNI GRCGYC 2 cut(s) 93, 369
BssSI CACGAG 3 cut(s) 2496, 3723, 3795
BssT1I CCWWGG 2 cut(s) 2727, 4327
Bst2BI CACGAG 3 cut(s) 2496, 3723, 3795
Bst2UI CCWGG 8 cut(s) 320, 347, 1399, 2774, 3335, 3515, 3829, 3868
Bst4CI ACNGT 7 cut(s) 380, 739, 929, 948, 1458, 2831, 3434
BstACI GRCGYC 2 cut(s) 93, 369
BstAFI CTTAAG 1 cut(s) 2225
BstAPI GCANNNNNTGC 2 cut(s) 1049, 3884
BstBAI YACGTR 1 cut(s) 3715
BstDSI CCRYGG 1 cut(s) 2727
BstENI CCTNNNNNAGG 1 cut(s) 801
BstF5I GGATG 6 cut(s) 2452, 3196, 3675, 4025, 4258, 4423
BstFNI CGCG 4 cut(s) 154, 185, 201, 3702
BstH2I RGCGCY 1 cut(s) 372
BstHHI GCGC 5 cut(s) 156, 185, 203, 371, 2475
BstMCI CGRYCG 1 cut(s) 905
BstNI CCWGG 8 cut(s) 320, 347, 1399, 2774, 3335, 3515, 3829, 3868
BstNSI RCATGY 5 cut(s) 1388, 2769, 2864, 3819, 4148
BstPAI GACNNNNGTC 1 cut(s) 1960
BstSFI CTRYAG 7 cut(s) 166, 1041, 1749, 3888, 3906, 3927, 4071
BstSLI GKGCMC 1 cut(s) 3334
BstUI CGCG 4 cut(s) 154, 185, 201, 3702
BstV2I GAAGAC 3 cut(s) 942, 3555, 3984
BstZI CGGCCG 1 cut(s) 902
Bsu36I CCTNAGG 1 cut(s) 3617
BtgI CCRYGG 1 cut(s) 2727
BtsCI GGATG 6 cut(s) 2452, 3196, 3675, 4025, 4258, 4423
BtsI GCAGTG 2 cut(s) 1050, 3897
BtsIMutI CAGTG 5 cut(s) 934, 1050, 2836, 3255, 3897
BtuMI TCGCGA 1 cut(s) 3702
BveI ACCTGC 3 cut(s) 595, 655, 2080
CaiI CAGNNNCTG 3 cut(s) 1049, 1757, 3167
CciI TCATGA 3 cut(s) 1576, 2866, 3307
CfoI GCGC 5 cut(s) 156, 185, 203, 371, 2475
Cfr10I RCCGGY 2 cut(s) 371, 3106
Cfr13I GGNCC 6 cut(s) 104, 2080, 2921, 3104, 3148, 4042
CseI GACGC 1 cut(s) 3776
CsiI ACCWGGT 1 cut(s) 345
Csp6I GTAC 7 cut(s) 584, 694, 2509, 3285, 3712, 3959, 4468
CviQI GTAC 7 cut(s) 584, 694, 2509, 3285, 3712, 3959, 4468
DinI GGCGCC 1 cut(s) 370
DrdI GACNNNNNNGTC 2 cut(s) 347, 1232
DseDI GACNNNNNNGTC 2 cut(s) 347, 1232
EaeI YGGCCR 2 cut(s) 902, 2449
EagI CGGCCG 1 cut(s) 902
EciI GGCGGA 2 cut(s) 2573, 4196
Ecl136II GAGCTC 2 cut(s) 226, 276
EclXI CGGCCG 1 cut(s) 902
Eco130I CCWWGG 2 cut(s) 2727, 4327
Eco24I GRGCYC 3 cut(s) 228, 278, 2122
Eco31I GGTCTC 1 cut(s) 2594
Eco47I GGWCC 2 cut(s) 2921, 4042
Eco52I CGGCCG 1 cut(s) 902
Eco53kI GAGCTC 2 cut(s) 226, 276
Eco57I CTGAAG 2 cut(s) 2054, 4022
Eco81I CCTNAGG 1 cut(s) 3617
Eco88I CYCGRG 5 cut(s) 158, 221, 1692, 1994, 3915
EcoICRI GAGCTC 2 cut(s) 226, 276
EcoNI CCTNNNNNAGG 1 cut(s) 801
EcoO109I RGGNCCY 1 cut(s) 4042
EcoRII CCWGG 8 cut(s) 318, 345, 1397, 2772, 3333, 3513, 3827, 3866
EcoT14I CCWWGG 2 cut(s) 2727, 4327
EcoT38I GRGCYC 3 cut(s) 228, 278, 2122
EgeI GGCGCC 1 cut(s) 370
EheI GGCGCC 1 cut(s) 370
ErhI CCWWGG 2 cut(s) 2727, 4327
FalI AAGNNNNNCTT 4 cut(s) 2397, 2429, 3730, 3762
FaqI GGGAC 1 cut(s) 2373
FauNDI CATATG 1 cut(s) 4472
FbaI TGATCA 2 cut(s) 42, 3304
FblI GTMKAC 2 cut(s) 96, 943
FokI GGATG 6 cut(s) 2459, 3203, 3682, 4012, 4265, 4410
FriOI GRGCYC 3 cut(s) 228, 278, 2122
GlaI GCGC 5 cut(s) 155, 184, 202, 370, 2474
GsuI CTGGAG 1 cut(s) 390
HaeII RGCGCY 1 cut(s) 372
HapII CCGG 7 cut(s) 279, 372, 1156, 1237, 3107, 3484, 3521
HgaI GACGC 1 cut(s) 3776
HhaI GCGC 5 cut(s) 156, 185, 203, 371, 2475
Hin1I GRCGYC 2 cut(s) 93, 369
Hin6I GCGC 5 cut(s) 154, 183, 201, 369, 2473
HinP1I GCGC 5 cut(s) 154, 183, 201, 369, 2473
HincII GTYRAC 4 cut(s) 1483, 3220, 3430, 3679
HindII GTYRAC 4 cut(s) 1483, 3220, 3430, 3679
HindIII AAGCTT 5 cut(s) 396, 658, 1494, 4395, 4503
HpaII CCGG 7 cut(s) 279, 372, 1156, 1237, 3107, 3484, 3521
HphI GGTGA 7 cut(s) 37, 392, 679, 990, 1001, 4094, 4118
Hpy166II GTNNAC 6 cut(s) 97, 944, 1483, 3220, 3430, 3679
Hpy8I GTNNAC 6 cut(s) 97, 944, 1483, 3220, 3430, 3679
HpyCH4III ACNGT 7 cut(s) 380, 739, 929, 948, 1458, 2831, 3434
HpyCH4IV ACGT 4 cut(s) 93, 1603, 3714, 4444
HpySE526I ACGT 4 cut(s) 93, 1603, 3714, 4444
Hsp92I GRCGYC 2 cut(s) 93, 369
HspAI GCGC 5 cut(s) 154, 183, 201, 369, 2473
KasI GGCGCC 1 cut(s) 368
KpnI GGTACC 1 cut(s) 587
KroI GCCGGC 1 cut(s) 371
KroNI GCCGGC 1 cut(s) 373
Ksp22I TGATCA 2 cut(s) 42, 3304
LguI GCTCTTC 2 cut(s) 4027, 4521
LmnI GCTCC 5 cut(s) 143, 231, 273, 281, 1969
LweI GCATC 6 cut(s) 733, 1015, 1630, 3137, 3184, 4243
MabI ACCWGGT 1 cut(s) 345
MaeII ACGT 4 cut(s) 93, 1603, 3714, 4444
MaeIII GTNAC 5 cut(s) 667, 741, 844, 1650, 1687
MbiI CCGCTC 3 cut(s) 2026, 4166, 4531
MfeI CAATTG 1 cut(s) 1091
MhlI GDGCHC 5 cut(s) 222, 228, 278, 2122, 3334
Mly113I GGCGCC 1 cut(s) 369
MmeI TCCRAC 3 cut(s) 414, 2574, 2916
MreI CGCCGGCG 1 cut(s) 371
MroNI GCCGGC 1 cut(s) 371
MroXI GAANNNNTTC 4 cut(s) 820, 2978, 3006, 4514
MslI CAYNNNNRTG 3 cut(s) 1657, 2496, 2865
MspA1I CMGCKG 4 cut(s) 192, 1411, 3764, 4157
MspCI CTTAAG 1 cut(s) 2225
MspI CCGG 7 cut(s) 279, 372, 1156, 1237, 3107, 3484, 3521
MunI CAATTG 1 cut(s) 1091
Mva1269I GAATGC 1 cut(s) 1625
MvaI CCWGG 8 cut(s) 320, 347, 1399, 2774, 3335, 3515, 3829, 3868
MvnI CGCG 4 cut(s) 154, 185, 201, 3702
NaeI GCCGGC 1 cut(s) 373
NarI GGCGCC 1 cut(s) 369
NciI CCSGG 4 cut(s) 280, 1156, 1238, 3522
NcoI CCATGG 1 cut(s) 2727
NdeI CATATG 1 cut(s) 4472
NgoMIV GCCGGC 1 cut(s) 371
NheI GCTAGC 2 cut(s) 1504, 3245
NlaIV GGNNCC 8 cut(s) 370, 585, 1210, 2716, 3331, 3519, 4044, 4450
NmeAIII GCCGAG 1 cut(s) 4267
NmuCI GTSAC 4 cut(s) 667, 741, 1650, 1687
NruI TCGCGA 1 cut(s) 3702
NspI RCATGY 5 cut(s) 1388, 2769, 2864, 3819, 4148
OliI CACNNNNGTG 1 cut(s) 1657
PaeI GCATGC 2 cut(s) 1388, 2864
PaeR7I CTCGAG 5 cut(s) 158, 221, 1692, 1994, 3915
PagI TCATGA 3 cut(s) 1576, 2866, 3307
PaqCI CACCTGC 1 cut(s) 655
PciSI GCTCTTC 2 cut(s) 4027, 4521
PcsI WCGNNNNNNNCGW 8 cut(s) 228, 240, 252, 261, 309, 339, 372, 443
PctI GAATGC 1 cut(s) 1625
PdiI GCCGGC 1 cut(s) 373
PdmI GAANNNNTTC 4 cut(s) 820, 2978, 3006, 4514
Pfl23II CGTACG 1 cut(s) 3711
PflFI GACNNNGTC 3 cut(s) 92, 347, 739
PflMI CCANNNNNTGG 2 cut(s) 3322, 3560
PluTI GGCGCC 1 cut(s) 372
Ppu21I YACGTR 1 cut(s) 3715
PpuMI RGGWCCY 1 cut(s) 4042
PshAI GACNNNNGTC 1 cut(s) 1960
Psp124BI GAGCTC 2 cut(s) 228, 278
Psp5II RGGWCCY 1 cut(s) 4042
Psp6I CCWGG 8 cut(s) 318, 345, 1397, 2772, 3333, 3513, 3827, 3866
PspGI CCWGG 8 cut(s) 318, 345, 1397, 2772, 3333, 3513, 3827, 3866
PspLI CGTACG 1 cut(s) 3711
PspN4I GGNNCC 8 cut(s) 370, 585, 1210, 2716, 3331, 3519, 4044, 4450
PspPI GGNCC 6 cut(s) 104, 2080, 2921, 3104, 3148, 4042
PspPPI RGGWCCY 1 cut(s) 4042
PspXI VCTCGAGB 3 cut(s) 158, 221, 1994
PsrI GAACNNNNNNTAC 2 cut(s) 805, 837
PstI CTGCAG 5 cut(s) 1045, 1753, 3892, 3910, 3931
PstNI CAGNNNCTG 3 cut(s) 1049, 1757, 3167
PsyI GACNNNGTC 3 cut(s) 92, 347, 739
PvuII CAGCTG 2 cut(s) 3764, 4157
RruI TCGCGA 1 cut(s) 3702
RsaI GTAC 7 cut(s) 585, 695, 2510, 3286, 3713, 3960, 4469
RsaNI GTAC 7 cut(s) 584, 694, 2509, 3285, 3712, 3959, 4468
RseI CAYNNNNRTG 3 cut(s) 1657, 2496, 2865
SacI GAGCTC 2 cut(s) 228, 278
SapI GCTCTTC 2 cut(s) 4027, 4521
Sau96I GGNCC 6 cut(s) 104, 2080, 2921, 3104, 3148, 4042
SduI GDGCHC 5 cut(s) 222, 228, 278, 2122, 3334
SexAI ACCWGGT 1 cut(s) 345
SfaNI GCATC 6 cut(s) 733, 1015, 1630, 3137, 3184, 4243
SfcI CTRYAG 7 cut(s) 166, 1041, 1749, 3888, 3906, 3927, 4071
SfoI GGCGCC 1 cut(s) 370
Sfr274I CTCGAG 5 cut(s) 158, 221, 1692, 1994, 3915
SgrAI CRCCGGYG 1 cut(s) 371
SinI GGWCC 2 cut(s) 2921, 4042
SlaI CTCGAG 5 cut(s) 158, 221, 1692, 1994, 3915
SmiMI CAYNNNNRTG 3 cut(s) 1657, 2496, 2865
SphI GCATGC 2 cut(s) 1388, 2864
SspDI GGCGCC 1 cut(s) 368
SspI AATATT 1 cut(s) 2614
SstI GAGCTC 2 cut(s) 228, 278
StyI CCWWGG 2 cut(s) 2727, 4327
TaaI ACNGT 7 cut(s) 380, 739, 929, 948, 1458, 2831, 3434
TaiI ACGT 4 cut(s) 96, 1606, 3717, 4447
TatI WGTACW 3 cut(s) 693, 3958, 4467
TscAI CASTG 5 cut(s) 934, 1050, 2836, 3262, 3897
TseFI GTSAC 4 cut(s) 667, 741, 1650, 1687
Tsp45I GTSAC 4 cut(s) 667, 741, 1650, 1687
TspGWI ACGGA 1 cut(s) 486
TspRI CASTG 5 cut(s) 934, 1050, 2836, 3262, 3897
Tth111I GACNNNGTC 3 cut(s) 92, 347, 739
Van91I CCANNNNNTGG 2 cut(s) 3322, 3560
Vha464I CTTAAG 1 cut(s) 2225
VpaK11BI GGWCC 2 cut(s) 2921, 4042
XagI CCTNNNNNAGG 1 cut(s) 801
XapI RAATTY 7 cut(s) 644, 1271, 1522, 2562, 3275, 3980, 4514
XbaI TCTAGA 4 cut(s) 1591, 2122, 2299, 3995
XceI RCATGY 5 cut(s) 1388, 2769, 2864, 3819, 4148
XhoI CTCGAG 5 cut(s) 158, 221, 1692, 1994, 3915
XmiI GTMKAC 2 cut(s) 96, 943
XmnI GAANNNNTTC 4 cut(s) 820, 2978, 3006, 4514
ZraI GACGTC 1 cut(s) 94
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.