Auxilin-like protein 1
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g12901 FvH4_1g12901 FvH4_1g12901 FvH4_1g12901 FvH4_1g12901 FvH4_1g12901 |
| malus_domestica | MD00G1129800.v1.1 MD15G1257500.v1.1 MD15G1257600.v1.1 |
| prunus_persica | Prupe.7G157600_v2.0.a1 |
| pyrus_communis | pycom15g22530 |
| rosa_chinensis | RchiOBHm_Chr2g0100991 |
| rosa_laevigata | RLG00000010835 RLG00000017034 RLG00000023919 RLG00000033736 |
| rosa_multiflora | Rmu_sc0001643.1_g000024 Rmu_sc0001862.1_g000007 Rmu_sc0010612.1_g000001 Rmu_sc0011777.1_g000003 Rmu_sc0014417.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00141670 Rroxscaffold_3G00247540 Rroxscaffold_7G00162160 |
| rosa_rugosa | Rorug02G0094900 Rorug02G0095000 |
| rosa_samantha | Rh2AG142100 Rh2BG147200 Rh2BG342700 Rh2CG148500 Rh2CG321700 Rh2CG337000 Rh2DG147800 Rh2DG359300 Rh4AG272100 Rh5BG424800 Rh5CG448500 Rh6AG221000 Rh6BG443100 Rh6DG458500 Rh7CG224000 |
| rosa_wichuraiana | Rw2G011150 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 2 cut(s) | 353, 1235 |
| AbsI | CCTCGAGG | 1 cut(s) | 155 |
| Acc16I | TGCGCA | 1 cut(s) | 278 |
| Acc36I | ACCTGC | 1 cut(s) | 3547 |
| AccB1I | GGYRCC | 4 cut(s) | 179, 3574, 4422, 4523 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 3617 |
| AccBSI | CCGCTC | 3 cut(s) | 36, 2533, 4241 |
| AccI | GTMKAC | 1 cut(s) | 943 |
| AccII | CGCG | 3 cut(s) | 151, 198, 4374 |
| AclWI | GGATC | 7 cut(s) | 470, 1319, 1392, 1405, 1634, 2775, 4116 |
| AcoI | YGGCCR | 1 cut(s) | 902 |
| AcsI | RAATTY | 6 cut(s) | 643, 1274, 2622, 2968, 4055, 4589 |
| AcuI | CTGAAG | 2 cut(s) | 2114, 2306 |
| AcyI | GRCGYC | 1 cut(s) | 180 |
| AfaI | GTAC | 6 cut(s) | 695, 1089, 1377, 3343, 4035, 4544 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 116, 371, 755, 803, 3577, 3617, 4415 |
| AjnI | CCWGG | 8 cut(s) | 324, 351, 595, 1400, 2796, 3570, 3884, 3923 |
| Alw21I | GWGCWC | 3 cut(s) | 219, 1541, 3391 |
| AlwI | GGATC | 7 cut(s) | 470, 1319, 1392, 1405, 1634, 2775, 4116 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 416, 1049, 1817, 3227 |
| Ama87I | CYCGRG | 3 cut(s) | 155, 218, 3972 |
| AoxI | GGCC | 9 cut(s) | 103, 118, 322, 902, 3207, 3235, 3882, 3921, 4406 |
| ApoI | RAATTY | 6 cut(s) | 643, 1274, 2622, 2968, 4055, 4589 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1142, 1174 |
| AseI | ATTAAT | 1 cut(s) | 1428 |
| Asp700I | GAANNNNTTC | 5 cut(s) | 820, 2748, 3038, 3066, 4589 |
| AspLEI | GCGC | 5 cut(s) | 153, 182, 200, 279, 4376 |
| AspS9I | GGNCC | 6 cut(s) | 104, 223, 2945, 3208, 4117, 4406 |
| AsuC2I | CCSGG | 2 cut(s) | 1156, 1241 |
| AsuHPI | GGTGA | 8 cut(s) | 179, 679, 990, 1001, 1204, 4169, 4193, 4526 |
| AsuNHI | GCTAGC | 1 cut(s) | 3305 |
| AvaI | CYCGRG | 3 cut(s) | 155, 218, 3972 |
| AvaII | GGWCC | 3 cut(s) | 223, 2945, 4117 |
| AxyI | CCTNAGG | 1 cut(s) | 3674 |
| BamHI | GGATCC | 1 cut(s) | 1397 |
| BanI | GGYRCC | 4 cut(s) | 179, 3574, 4422, 4523 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 934, 966 |
| BauI | CACGAG | 5 cut(s) | 1989, 2556, 3756, 3780, 3852 |
| BbsI | GAAGAC | 3 cut(s) | 298, 942, 1266 |
| Bbv12I | GWGCWC | 3 cut(s) | 219, 1541, 3391 |
| BccI | CCATC | 8 cut(s) | 33, 371, 464, 488, 1202, 3020, 3373, 3721 |
| BceAI | ACGGC | 4 cut(s) | 115, 320, 337, 385 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 196, 230, 4365, 4399 |
| BciT130I | CCWGG | 8 cut(s) | 326, 353, 597, 1402, 2798, 3572, 3886, 3925 |
| BciVI | GTATCC | 1 cut(s) | 593 |
| BclI | TGATCA | 2 cut(s) | 51, 3361 |
| BcnI | CCSGG | 2 cut(s) | 1156, 1241 |
| BfmI | CTRYAG | 8 cut(s) | 1041, 1050, 1809, 3945, 3963, 3984, 4112, 4146 |
| BfoI | RGCGCY | 1 cut(s) | 183 |
| BfuAI | ACCTGC | 1 cut(s) | 3547 |
| BfuI | GTATCC | 1 cut(s) | 593 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 773 |
| BglII | AGATCT | 3 cut(s) | 1648, 1835, 4040 |
| BlpI | GCTNAGC | 1 cut(s) | 4233 |
| Bme18I | GGWCC | 3 cut(s) | 223, 2945, 4117 |
| BmeT110I | CYCGRG | 3 cut(s) | 155, 218, 3972 |
| BmgT120I | GGNCC | 6 cut(s) | 104, 223, 2945, 3208, 4117, 4406 |
| BmiI | GGNNCC | 9 cut(s) | 181, 225, 385, 1213, 1399, 3576, 4119, 4424, 4525 |
| BmrI | ACTGGG | 2 cut(s) | 3149, 3772 |
| BmtI | GCTAGC | 1 cut(s) | 3309 |
| BmuI | ACTGGG | 2 cut(s) | 3149, 3772 |
| BpiI | GAAGAC | 3 cut(s) | 298, 942, 1266 |
| BplI | GAGNNNNNCTC | 1 cut(s) | 28 |
| BpmI | CTGGAG | 2 cut(s) | 390, 1673 |
| Bpu10I | CCTNAGC | 1 cut(s) | 3390 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 4233 |
| BpuEI | CTTGAG | 7 cut(s) | 1737, 2126, 2165, 2318, 2495, 2859, 3914 |
| BpuMI | CCSGG | 2 cut(s) | 1156, 1241 |
| BsaBI | GATNNNNATC | 2 cut(s) | 474, 861 |
| BsaHI | GRCGYC | 1 cut(s) | 180 |
| BsaI | GGTCTC | 1 cut(s) | 426 |
| BsaJI | CCNNGG | 8 cut(s) | 300, 1240, 1356, 1578, 3211, 3885, 4104, 4402 |
| BsaWI | WCCGGW | 3 cut(s) | 580, 3540, 3577 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 577, 607 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 116, 371, 755, 803, 3577, 3617, 4415 |
| Bse1I | ACTGG | 5 cut(s) | 991, 3081, 3144, 3767, 4527 |
| Bse21I | CCTNAGG | 1 cut(s) | 3674 |
| Bse3DI | GCAATG | 6 cut(s) | 64, 1077, 1690, 2812, 3846, 4090 |
| Bse8I | GATNNNNATC | 2 cut(s) | 474, 861 |
| BseBI | CCWGG | 8 cut(s) | 326, 353, 597, 1402, 2798, 3572, 3886, 3925 |
| BseDI | CCNNGG | 8 cut(s) | 300, 1240, 1356, 1578, 3211, 3885, 4104, 4402 |
| BseGI | GGATG | 9 cut(s) | 25, 2512, 3256, 3514, 3732, 4100, 4333, 4339, 4498 |
| BseJI | GATNNNNATC | 2 cut(s) | 474, 861 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 116, 371, 755, 803, 3577, 3617, 4415 |
| BseMI | GCAATG | 6 cut(s) | 64, 1077, 1690, 2812, 3846, 4090 |
| BseNI | ACTGG | 5 cut(s) | 991, 3081, 3144, 3767, 4527 |
| BseRI | GAGGAG | 9 cut(s) | 115, 118, 121, 124, 131, 193, 275, 1193, 3029 |
| BseYI | CCCAGC | 1 cut(s) | 3902 |
| BsgI | GTGCAG | 1 cut(s) | 3897 |
| Bsh1236I | CGCG | 3 cut(s) | 151, 198, 4374 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1160 |
| BshFI | GGCC | 9 cut(s) | 105, 120, 324, 904, 3209, 3237, 3884, 3923, 4408 |
| BshNI | GGYRCC | 4 cut(s) | 179, 3574, 4422, 4523 |
| BsiEI | CGRYCG | 1 cut(s) | 1160 |
| BsiHKAI | GWGCWC | 3 cut(s) | 219, 1541, 3391 |
| BsiHKCI | CYCGRG | 3 cut(s) | 155, 218, 3972 |
| BsiSI | CCGG | 7 cut(s) | 285, 581, 768, 1156, 1240, 3541, 3578 |
| BslFI | GGGAC | 2 cut(s) | 209, 2992 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 116, 371, 755, 803, 3577, 3617, 4415 |
| BsmFI | GGGAC | 2 cut(s) | 209, 2992 |
| BsmI | GAATGC | 2 cut(s) | 16, 1685 |
| BsnI | GGCC | 9 cut(s) | 105, 120, 324, 904, 3209, 3237, 3884, 3923, 4408 |
| Bso31I | GGTCTC | 1 cut(s) | 426 |
| BsoBI | CYCGRG | 3 cut(s) | 155, 218, 3972 |
| Bsp1286I | GDGCHC | 3 cut(s) | 219, 1541, 3391 |
| Bsp1407I | TGTACA | 1 cut(s) | 1375 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 4233 |
| BspANI | GGCC | 9 cut(s) | 105, 120, 324, 904, 3209, 3237, 3884, 3923, 4408 |
| BspFNI | CGCG | 3 cut(s) | 151, 198, 4374 |
| BspHI | TCATGA | 3 cut(s) | 1636, 2890, 3364 |
| BspLI | GGNNCC | 9 cut(s) | 181, 225, 385, 1213, 1399, 3576, 4119, 4424, 4525 |
| BspMAI | CTGCAG | 6 cut(s) | 1045, 1054, 1813, 3949, 3967, 3988 |
| BspMI | ACCTGC | 1 cut(s) | 3547 |
| BspOI | GCTAGC | 1 cut(s) | 3309 |
| BspPI | GGATC | 7 cut(s) | 470, 1319, 1392, 1405, 1634, 2775, 4116 |
| BspQI | GCTCTTC | 1 cut(s) | 4102 |
| BspT107I | GGYRCC | 4 cut(s) | 179, 3574, 4422, 4523 |
| BspTNI | GGTCTC | 1 cut(s) | 426 |
| BsrBI | CCGCTC | 3 cut(s) | 36, 2533, 4241 |
| BsrDI | GCAATG | 6 cut(s) | 64, 1077, 1690, 2812, 3846, 4090 |
| BsrGI | TGTACA | 1 cut(s) | 1375 |
| BsrI | ACTGG | 5 cut(s) | 991, 3081, 3144, 3767, 4527 |
| BssECI | CCNNGG | 8 cut(s) | 300, 1240, 1356, 1578, 3211, 3885, 4104, 4402 |
| BssNI | GRCGYC | 1 cut(s) | 180 |
| BssSI | CACGAG | 5 cut(s) | 1989, 2556, 3756, 3780, 3852 |
| BssT1I | CCWWGG | 3 cut(s) | 1578, 3211, 4402 |
| Bst2BI | CACGAG | 5 cut(s) | 1989, 2556, 3756, 3780, 3852 |
| Bst2UI | CCWGG | 8 cut(s) | 326, 353, 597, 1402, 2798, 3572, 3886, 3925 |
| Bst4CI | ACNGT | 9 cut(s) | 167, 739, 929, 948, 967, 1139, 1265, 2855, 4608 |
| Bst6I | CTCTTC | 9 cut(s) | 2031, 2081, 2159, 2273, 2312, 2336, 2489, 3072, 4102 |
| BstACI | GRCGYC | 1 cut(s) | 180 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1049 |
| BstAUI | TGTACA | 1 cut(s) | 1375 |
| BstEII | GGTNACC | 1 cut(s) | 1133 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 801 |
| BstF5I | GGATG | 9 cut(s) | 25, 2512, 3256, 3514, 3732, 4100, 4333, 4339, 4498 |
| BstFNI | CGCG | 3 cut(s) | 151, 198, 4374 |
| BstH2I | RGCGCY | 1 cut(s) | 183 |
| BstHHI | GCGC | 5 cut(s) | 153, 182, 200, 279, 4376 |
| BstMCI | CGRYCG | 1 cut(s) | 1160 |
| BstNI | CCWGG | 8 cut(s) | 326, 353, 597, 1402, 2798, 3572, 3886, 3925 |
| BstNSI | RCATGY | 4 cut(s) | 2793, 2888, 3876, 4223 |
| BstPI | GGTNACC | 1 cut(s) | 1133 |
| BstSFI | CTRYAG | 8 cut(s) | 1041, 1050, 1809, 3945, 3963, 3984, 4112, 4146 |
| BstUI | CGCG | 3 cut(s) | 151, 198, 4374 |
| BstV2I | GAAGAC | 3 cut(s) | 298, 942, 1266 |
| BstX2I | RGATCY | 7 cut(s) | 475, 1324, 1397, 1648, 1835, 4040, 4108 |
| BstYI | RGATCY | 7 cut(s) | 475, 1324, 1397, 1648, 1835, 4040, 4108 |
| Bsu36I | CCTNAGG | 1 cut(s) | 3674 |
| BsuI | GTATCC | 1 cut(s) | 593 |
| BsuRI | GGCC | 9 cut(s) | 105, 120, 324, 904, 3209, 3237, 3884, 3923, 4408 |
| BtsCI | GGATG | 9 cut(s) | 25, 2512, 3256, 3514, 3732, 4100, 4333, 4339, 4498 |
| BtsI | GCAGTG | 1 cut(s) | 3954 |
| BtsIMutI | CAGTG | 5 cut(s) | 934, 963, 2860, 3088, 3954 |
| BveI | ACCTGC | 1 cut(s) | 3547 |
| CaiI | CAGNNNCTG | 4 cut(s) | 416, 1049, 1817, 3227 |
| CciI | TCATGA | 3 cut(s) | 1636, 2890, 3364 |
| CfoI | GCGC | 5 cut(s) | 153, 182, 200, 279, 4376 |
| Cfr13I | GGNCC | 6 cut(s) | 104, 223, 2945, 3208, 4117, 4406 |
| CseI | GACGC | 1 cut(s) | 3833 |
| CsiI | ACCWGGT | 1 cut(s) | 351 |
| Csp6I | GTAC | 6 cut(s) | 694, 1088, 1376, 3342, 4034, 4543 |
| CviQI | GTAC | 6 cut(s) | 694, 1088, 1376, 3342, 4034, 4543 |
| DinI | GGCGCC | 1 cut(s) | 181 |
| DraI | TTTAAA | 1 cut(s) | 2068 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 353, 1235 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 353, 1235 |
| EaeI | YGGCCR | 1 cut(s) | 902 |
| Eam1104I | CTCTTC | 9 cut(s) | 2031, 2081, 2159, 2273, 2312, 2336, 2489, 3072, 4102 |
| EarI | CTCTTC | 9 cut(s) | 2031, 2081, 2159, 2273, 2312, 2336, 2489, 3072, 4102 |
| EciI | GGCGGA | 4 cut(s) | 229, 387, 1735, 3950 |
| Eco130I | CCWWGG | 3 cut(s) | 1578, 3211, 4402 |
| Eco31I | GGTCTC | 1 cut(s) | 426 |
| Eco47I | GGWCC | 3 cut(s) | 223, 2945, 4117 |
| Eco57I | CTGAAG | 2 cut(s) | 2114, 2306 |
| Eco81I | CCTNAGG | 1 cut(s) | 3674 |
| Eco88I | CYCGRG | 3 cut(s) | 155, 218, 3972 |
| Eco91I | GGTNACC | 1 cut(s) | 1133 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 801 |
| EcoO109I | RGGNCCY | 2 cut(s) | 223, 4117 |
| EcoO65I | GGTNACC | 1 cut(s) | 1133 |
| EcoRII | CCWGG | 8 cut(s) | 324, 351, 595, 1400, 2796, 3570, 3884, 3923 |
| EcoT14I | CCWWGG | 3 cut(s) | 1578, 3211, 4402 |
| EgeI | GGCGCC | 1 cut(s) | 181 |
| EheI | GGCGCC | 1 cut(s) | 181 |
| ErhI | CCWWGG | 3 cut(s) | 1578, 3211, 4402 |
| FaqI | GGGAC | 2 cut(s) | 209, 2992 |
| FauI | CCCGC | 2 cut(s) | 114, 156 |
| FauNDI | CATATG | 2 cut(s) | 3769, 4547 |
| FbaI | TGATCA | 2 cut(s) | 51, 3361 |
| FblI | GTMKAC | 1 cut(s) | 943 |
| FokI | GGATG | 9 cut(s) | 12, 2519, 3263, 3501, 3739, 4087, 4340, 4346, 4485 |
| FspI | TGCGCA | 1 cut(s) | 278 |
| GlaI | GCGC | 5 cut(s) | 152, 181, 199, 278, 4375 |
| GsaI | CCCAGC | 1 cut(s) | 3906 |
| GsuI | CTGGAG | 2 cut(s) | 390, 1673 |
| HaeII | RGCGCY | 1 cut(s) | 183 |
| HaeIII | GGCC | 9 cut(s) | 105, 120, 324, 904, 3209, 3237, 3884, 3923, 4408 |
| HapII | CCGG | 7 cut(s) | 285, 581, 768, 1156, 1240, 3541, 3578 |
| HgaI | GACGC | 1 cut(s) | 3833 |
| HhaI | GCGC | 5 cut(s) | 153, 182, 200, 279, 4376 |
| Hin1I | GRCGYC | 1 cut(s) | 180 |
| Hin6I | GCGC | 5 cut(s) | 151, 180, 198, 277, 4374 |
| HinP1I | GCGC | 5 cut(s) | 151, 180, 198, 277, 4374 |
| HincII | GTYRAC | 3 cut(s) | 3280, 3487, 3736 |
| HindII | GTYRAC | 3 cut(s) | 3280, 3487, 3736 |
| HindIII | AAGCTT | 2 cut(s) | 460, 4578 |
| HpaII | CCGG | 7 cut(s) | 285, 581, 768, 1156, 1240, 3541, 3578 |
| HphI | GGTGA | 8 cut(s) | 179, 679, 990, 1001, 1204, 4169, 4193, 4526 |
| Hpy166II | GTNNAC | 6 cut(s) | 97, 944, 998, 3280, 3487, 3736 |
| Hpy8I | GTNNAC | 6 cut(s) | 97, 944, 998, 3280, 3487, 3736 |
| Hpy99I | CGWCG | 9 cut(s) | 92, 95, 233, 251, 254, 323, 341, 350, 395 |
| HpyCH4III | ACNGT | 9 cut(s) | 167, 739, 929, 948, 967, 1139, 1265, 2855, 4608 |
| HpyCH4IV | ACGT | 2 cut(s) | 93, 4519 |
| HpySE526I | ACGT | 2 cut(s) | 93, 4519 |
| Hsp92I | GRCGYC | 1 cut(s) | 180 |
| HspAI | GCGC | 5 cut(s) | 151, 180, 198, 277, 4374 |
| KasI | GGCGCC | 1 cut(s) | 179 |
| Ksp22I | TGATCA | 2 cut(s) | 51, 3361 |
| LguI | GCTCTTC | 1 cut(s) | 4102 |
| LmnI | GCTCC | 5 cut(s) | 41, 287, 598, 2029, 3937 |
| MabI | ACCWGGT | 1 cut(s) | 351 |
| MaeII | ACGT | 2 cut(s) | 93, 4519 |
| MaeIII | GTNAC | 8 cut(s) | 583, 667, 741, 844, 1133, 1710, 1747, 3758 |
| MbiI | CCGCTC | 3 cut(s) | 36, 2533, 4241 |
| MfeI | CAATTG | 1 cut(s) | 1091 |
| MflI | RGATCY | 7 cut(s) | 475, 1324, 1397, 1648, 1835, 4040, 4108 |
| MhlI | GDGCHC | 3 cut(s) | 219, 1541, 3391 |
| Mly113I | GGCGCC | 1 cut(s) | 180 |
| MmeI | TCCRAC | 3 cut(s) | 414, 2460, 2634 |
| MroXI | GAANNNNTTC | 5 cut(s) | 820, 2748, 3038, 3066, 4589 |
| MslI | CAYNNNNRTG | 2 cut(s) | 2556, 2889 |
| MspA1I | CMGCKG | 4 cut(s) | 1364, 3464, 3821, 4232 |
| MspI | CCGG | 7 cut(s) | 285, 581, 768, 1156, 1240, 3541, 3578 |
| MunI | CAATTG | 1 cut(s) | 1091 |
| Mva1269I | GAATGC | 2 cut(s) | 16, 1685 |
| MvaI | CCWGG | 8 cut(s) | 326, 353, 597, 1402, 2798, 3572, 3886, 3925 |
| MvnI | CGCG | 3 cut(s) | 151, 198, 4374 |
| NarI | GGCGCC | 1 cut(s) | 180 |
| NciI | CCSGG | 2 cut(s) | 1156, 1241 |
| NdeI | CATATG | 2 cut(s) | 3769, 4547 |
| NheI | GCTAGC | 1 cut(s) | 3305 |
| NlaIV | GGNNCC | 9 cut(s) | 181, 225, 385, 1213, 1399, 3576, 4119, 4424, 4525 |
| NmeAIII | GCCGAG | 1 cut(s) | 4342 |
| NmuCI | GTSAC | 5 cut(s) | 667, 741, 1710, 1747, 3758 |
| NsbI | TGCGCA | 1 cut(s) | 278 |
| NspI | RCATGY | 4 cut(s) | 2793, 2888, 3876, 4223 |
| PaeI | GCATGC | 1 cut(s) | 2888 |
| PaeR7I | CTCGAG | 3 cut(s) | 155, 218, 3972 |
| PagI | TCATGA | 3 cut(s) | 1636, 2890, 3364 |
| PciSI | GCTCTTC | 1 cut(s) | 4102 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 225, 297, 315, 345 |
| PctI | GAATGC | 2 cut(s) | 16, 1685 |
| PdmI | GAANNNNTTC | 5 cut(s) | 820, 2748, 3038, 3066, 4589 |
| PflFI | GACNNNGTC | 2 cut(s) | 353, 739 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 3617 |
| PfoI | TCCNGGA | 1 cut(s) | 595 |
| PluTI | GGCGCC | 1 cut(s) | 183 |
| PpuMI | RGGWCCY | 2 cut(s) | 223, 4117 |
| PshBI | ATTAAT | 1 cut(s) | 1428 |
| Psp5II | RGGWCCY | 2 cut(s) | 223, 4117 |
| Psp6I | CCWGG | 8 cut(s) | 324, 351, 595, 1400, 2796, 3570, 3884, 3923 |
| PspEI | GGTNACC | 1 cut(s) | 1133 |
| PspFI | CCCAGC | 1 cut(s) | 3902 |
| PspGI | CCWGG | 8 cut(s) | 324, 351, 595, 1400, 2796, 3570, 3884, 3923 |
| PspN4I | GGNNCC | 9 cut(s) | 181, 225, 385, 1213, 1399, 3576, 4119, 4424, 4525 |
| PspPI | GGNCC | 6 cut(s) | 104, 223, 2945, 3208, 4117, 4406 |
| PspPPI | RGGWCCY | 2 cut(s) | 223, 4117 |
| PspXI | VCTCGAGB | 2 cut(s) | 155, 218 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 805, 837 |
| PstI | CTGCAG | 6 cut(s) | 1045, 1054, 1813, 3949, 3967, 3988 |
| PstNI | CAGNNNCTG | 4 cut(s) | 416, 1049, 1817, 3227 |
| PsuI | RGATCY | 7 cut(s) | 475, 1324, 1397, 1648, 1835, 4040, 4108 |
| PsyI | GACNNNGTC | 2 cut(s) | 353, 739 |
| PvuII | CAGCTG | 4 cut(s) | 1364, 3464, 3821, 4232 |
| RsaI | GTAC | 6 cut(s) | 695, 1089, 1377, 3343, 4035, 4544 |
| RsaNI | GTAC | 6 cut(s) | 694, 1088, 1376, 3342, 4034, 4543 |
| RseI | CAYNNNNRTG | 2 cut(s) | 2556, 2889 |
| SapI | GCTCTTC | 1 cut(s) | 4102 |
| Sau96I | GGNCC | 6 cut(s) | 104, 223, 2945, 3208, 4117, 4406 |
| SduI | GDGCHC | 3 cut(s) | 219, 1541, 3391 |
| SexAI | ACCWGGT | 1 cut(s) | 351 |
| SfcI | CTRYAG | 8 cut(s) | 1041, 1050, 1809, 3945, 3963, 3984, 4112, 4146 |
| SfoI | GGCGCC | 1 cut(s) | 181 |
| Sfr274I | CTCGAG | 3 cut(s) | 155, 218, 3972 |
| SinI | GGWCC | 3 cut(s) | 223, 2945, 4117 |
| SlaI | CTCGAG | 3 cut(s) | 155, 218, 3972 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 2556, 2889 |
| SphI | GCATGC | 1 cut(s) | 2888 |
| SspDI | GGCGCC | 1 cut(s) | 179 |
| SspI | AATATT | 2 cut(s) | 1463, 2674 |
| StyI | CCWWGG | 3 cut(s) | 1578, 3211, 4402 |
| TaaI | ACNGT | 9 cut(s) | 167, 739, 929, 948, 967, 1139, 1265, 2855, 4608 |
| TaiI | ACGT | 2 cut(s) | 96, 4522 |
| TaqII | GACCGA | 1 cut(s) | 2930 |
| TatI | WGTACW | 5 cut(s) | 693, 1087, 1375, 4033, 4542 |
| TauI | GCSGC | 6 cut(s) | 66, 105, 236, 245, 2461, 4244 |
| TscAI | CASTG | 5 cut(s) | 934, 970, 2860, 3088, 3954 |
| TseFI | GTSAC | 5 cut(s) | 667, 741, 1710, 1747, 3758 |
| Tsp45I | GTSAC | 5 cut(s) | 667, 741, 1710, 1747, 3758 |
| TspGWI | ACGGA | 1 cut(s) | 1729 |
| TspRI | CASTG | 5 cut(s) | 934, 970, 2860, 3088, 3954 |
| Tth111I | GACNNNGTC | 2 cut(s) | 353, 739 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 3617 |
| VpaK11BI | GGWCC | 3 cut(s) | 223, 2945, 4117 |
| VspI | ATTAAT | 1 cut(s) | 1428 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 801 |
| XapI | RAATTY | 6 cut(s) | 643, 1274, 2622, 2968, 4055, 4589 |
| XbaI | TCTAGA | 3 cut(s) | 1790, 2182, 2359 |
| XceI | RCATGY | 4 cut(s) | 2793, 2888, 3876, 4223 |
| XhoI | CTCGAG | 3 cut(s) | 155, 218, 3972 |
| XmiI | GTMKAC | 1 cut(s) | 943 |
| XmnI | GAANNNNTTC | 5 cut(s) | 820, 2748, 3038, 3066, 4589 |