Rroxscaffold_2G00141670

Auxilin-like protein 1

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
Physical Location & Seq
Forward (+)
79879938 .. 79886182
6245 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00141670.1

Sequence Viewer

Length: 4638 bp
ATGGAGAACCTCTCGCATTCTCGCCATCCCAACCGCTCCGCTTCCAAAGTGATCAGCAATGGCGGCTTCCTCGCCAAGACCCTATACGACGACGTTTACGGCGGCCCGCCCAAGTTCGGCCTCTCCTCCTCCTCCTCCTCGCTCTCCCCGCGCCTCGAAGACTACGGCGAGATTTTCGGCGCCTTCCACGCCTCACGCGCCTCCTCGATTCCCGTGCTCGAGGTCCCCGTCTCCACCGCCGCCGACGACGACCACAATGAGGAGTTCTTCGATGTGCGCAGCTCCGGCTTCGACTACTCCGAGGTCTTCGGAGGCTTCGACGGCCTGGATTTCGCCGTAGCCTACGACGACCTGGTCAAGCAACCCTACGGCGGAGACGGTGGTTCCTCCGACGAAGCTTGGACTCCAGCAGAATCTGGGTCTCTCTCAGGAGAGTCGAATCATTCTGTGAAGAACCAAAGCTTTACAGATGGAGATCCTTACTATTCATTTGATGGCAGCTCTGATTTTGGCATATCATATAACAAAGTTCATCAAAAAAGCAATGAAGAATCTTTGAATGGGAGGACTCATGCAAATCTGGTAACTGCTGCTCCTGGATACAGATATATGCCAGATGAAATTACTCCCGTGCAACAGACAAATTTCGACAATCAAAGCTTGCTGGTGACTGATGATAGAAAGTTCAATATGTACTCTAATGTGGAAATGGTAAATGAAAAGCATCTCAGAAAGACTGTGTCACATCCCCCTAATGGTAGTTCAGCCGGACAGGCTTATGGAGACAGCCATAAACTTGAAAAAGGATATGGTAGAAATGGTTCTCGTCATAAAGAGCCATTTGTGACTATATCGGATATAAATCTTAGGACTCAGCCCTCTCATTTGCCACCACCCTGTCGGCCGCCACCCATAGTTGATGACAACAGTGGAGATTCTGGTAGACTGTCTTCCAATTCTAACACCGTTTCTTCTGATGAGAGAACTGGTGATAGTTCACCCCCTTTCTTTGATGTAGAGGTAGATGCAAGTTCATCTGCTGCAGTCTCTGCAGCAGCTATGAAAGAAGCAATGGAGAAAGCTAGAGTACAATTGAGAAGTGCAAAGGAGTTAATGCAGAGGAAGAAAGAGGGTTATCGTAGTTGTTCAAAATCCCGGTCAAAGAAAGAAATAAAAGAGGAAGTAAAGGTGGGTAAAGTTGCTGACGGTTCCAGCTGTAAGAAAGATGATAGAGTCCGGGGAACTTCTGAAAGAGAAGACAGTAGATTGAAATTTGCTGTTAGTGAGGAAATGCAAAAGGTTTTGAAGAAAGTCAGAGAAGATCCAGAATCTTTAGGAGAAGAAAAATCTTCCGAGGCAGCTGAAATTCTTGTACAGGAGAAGCATGGGAAGGGATCCTGGTCATCTCAGGGGTCTTTCAAAATTAATGAAGCTAGTGAATGGCAAGAAGCAACACAGTATTTTGAATTGGTGGCATTAGATGACACCAAGAAGGCTTTTGAGCAAGCAAACAAAGATAAGATTTTGGTTCAGAGCACAAAAGGGCCTGAACAGAGACAGAAAGACAAAGCAACCTTGGAAGTATTAGAGCAGCAAGAAACTGATAAAAAACTCAGAGCTGTTGTTGAAGTTCATGATCCAGAAGATCTGGAGAAGAAACGTCGTGGATTGGAGGAATGCAATGCAAGATCAAAAGATGCTAAAGAGTTACGGAGGCGGAAAGAGCATGAAAAAAAGGTAAAAGTGACTCGAGAAACTTTTGAGAAGGGAGAGAAAGAGATGAGTTCTAGAGTGGGCAAGCTGCCTGCAGAGTCTGAGAAGCAAAGAGGCAGATCTGTGAAATCAGACAAACATGAAAATATGGCAGAGGTTGATGAAGGTAAAGAAAGTAAGTTCAATGTTGAAAATGCTATGCAGCAGAAGGACAATGAAGCAAAGTTGCAAGAAAATGATAAATCACTTAGAATTGAGGAAAGACATAAGGAATCTCGTGGAATGGAAGGCATTGAAAACAGACAAGAGACTTTGGAGCAGGAAGAAATTGAAAGAAGGCTCATAGAGGCACATAAACAAGCCGAAAATGAGAAGAGACTGAAGGAGGTTCTTGAGAAGGAAGAAAACGAGAAAAGGTTAAAGGAGGCTCTTGAGCAGGCAGAAAATGAGAAGAGGTTGAAAAAGGCTCTAGAGTTGCAAGAGAATGAGAAGAAATTAAAGGAGACTCTTGAACGAGAAAACAAAAGGAGACAGAAAGAGGCTGCTCAAAGAGAAGAAAATGAGAAGAGACTGAAGGAGGCTCTTGAGAAGGAAGAAAATGAGAAGAGGTTGAAGGAGGAAAATGAGAAGAGGCTGAAAAAGGCTCTAGAGTTGCAAGAGAATGAGAAGAAATTAAAGGAGGCTCTTGAACGAGAAAACAAAAGGAGACAGAAAGAGGCTGCTCAAAGAGAAGAAAATGAGAAGCGGCTAAAAGAAGCTCTTGAGTTGGAAGAATATCAGAAGAGACAAAAGGATGCTGCCCGTGAAAGAGAGGAAAATGAGCGGAGACTTAAAATGGCTCATTCTCGTGAGCAGCAGTATGCCATAAAAAGATTGAAGGAGTCTCAGGAAAAAGCATTTAAGCAGGCAGAAATTCAACAAAAGTTAGATGAGGCTAGTGTGTCGGTAGAGACCGAAAAGAACATTAAAGTTGCTGATGACAGGGAAGACGTGGAAGTCCTAAACAAAACACTAAAGGGAACAGAGAGGAATGAAAATGTTCAAGAACTCAGGTCGGTTAAAAAAACACATTTGCACATGGAAGTAGAGGATCACAAGGTATCTGATGAGACATGCAACCAGGATTGCAATGAGAACTCTCAAGCAACTCAAATAGCAAGAAACCATGATGAGAACAGTGAAACAATGAAGGAATCTCAAGGGGTGCATGCTCATGAAGAAAATGGAGAGAAAAAGACCGACAACAAAAATAGTGATACACAATCAGGTCCAAAAGTTGTTGAACCAGTAAATGTGTCGCTTGATTTAGAATACAAGGCATCTGCCTCGTCCCAAGAGGAGTTAGAAGATGGAGAGAAGCGGTTCAAAAGGAAAGATGCTAATGAATCTCTTCCTATAGATTCCAGTGTGAAGAAAGGAAGGGAAGAAATTAGAGCTGAACCTAAAGTTAGGAAAAGAGAACTGGGGGGAGTTGAAACGAAAAATGGGCCGGTTGATGAGAAGTTCAAAGCATCTGGCTTGGCCCAAGGAGGCACAGAATCTGGAAAAAGCCAATTCAGAATGGATGATGCCTATGAGTCAATTCCTTTTGTCAACTTTGTGAAGAAGGCAGTAGAAGAAAGCTCTGGCTTTGAAAAACCACAACCAATCAATAGTACCTCTCAAAAGGACTCTGATCATGAAACTCAAAAGATGGAATGTGCTCAGGAATGGAAAGAGAGAGAAAAGGACTCGAAGCAAGTCCATGCTTCCTCAAATCAGGAAGAAAACTTGGCAGCTGAACCTGTGAAAGAGTTTGTTGACAATAGAAGGAAAACAGAAGCAGCTCATCCAGCTATGGCAGAAATAAACAACCGGAAATCATCTCAGCAGGTCAATGCAAGCCAGGCACCAGAGAGGAAAGTCAAGAATCTTAAAGAAAATCCATTAAATGGGGAAAAAGAAAAAGAAAGGTTGAAAAGAGAAAGAGAGCTTGAAAATGATCGCCTTAGGAAGATTGAGGAAGAAAGAGAAAGGGAGAGGGAAAGAGAAAAGGACAGGATGGCTGTTGACAGGGCAACACTTGAAGCTCGCGACTGGGCATATGTGGAAGCTCGTGAGAAAGCAGAAAGGGTTGCTTTGGAGAGAGCAACAGCTGACGCTCGACAAAGAGCAATGGCAGAGGCTCGTGAAAGATTAGAGAAAGCATGTGCAGAGGCCAGGGAGAAGTCATTAGCTGGGAAGGCAGCTATGGAGGCCAGGCTCAAGGCGGAGCGTGCTGCAGTGGAGAGGGCTACTGCAGAGGCTCGAGAGCGTGCTGCAGAAAAACTAAAGGCTGAAAGGGCTTCTTTTGAGACAAGGGAACGAGTACAAAGATCTGTTTCTGATAAATTTAGTGCATCTTCCAGAAATAATGGATTGAGACATTGCTCTTCATCCTCGGATCTACAGGACCCACAGAAATCAAGACACCCTTATTCTACAGCTTATGGTGAGAGATATGAAGGAGTTGAAGGTGAATCGGCTCAAAGGTGTAAAGCTAGACTAGAGAGACATGCTAGAACAGCTGAGCGAGCGGCAAAAGCTCTTGCGGAGAAGAATATGCGTGATCTTCTTGCTCAAAGAGAGCAAGCAGAGAGAAATAGATTAGCCGAGACTCTGGATGCGGATGTCAAGAGGTGGTCAAGCGGAAAAGAGGGGAACTTGCGCGCATTACTTTCGACTTTGCAATATATCCTTGGGCCTGATAGTGGTTGGCACCCTATTCCCTTGACAGAAGTGATAACTGCTGCTGCTGTAAAGAGAGCTTACAGGAAAGCCACTCTTTGTGTTCATCCTGACAAATTACAACAACGTGGTGCCAGTATTCACCAGAAGTACATATGTGAAAAAGTTTTCGATCTTCTAAAGGAAGCTTGGAACAAATTCAACTCAGAAGAACGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1545

Amino Acids

176.23

Weight (kDa)

6.2

Isoelectric Point (pI)

49.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 353, 2708
Acc16I TGCGCA 1 cut(s) 278
Acc36I ACCTGC 1 cut(s) 3574
AccB1I GGYRCC 4 cut(s) 179, 3601, 4449, 4550
AccB7I CCANNNNNTGG 1 cut(s) 3644
AccBSI CCGCTC 3 cut(s) 36, 2536, 4268
AccI GTMKAC 1 cut(s) 943
AccII CGCG 4 cut(s) 151, 198, 3786, 4401
AclWI GGATC 7 cut(s) 470, 1316, 1389, 1402, 1631, 2811, 4143
AcoI YGGCCR 1 cut(s) 902
AcsI RAATTY 6 cut(s) 643, 1271, 1365, 2625, 4082, 4616
AcuI CTGAAG 2 cut(s) 2114, 2306
AcyI GRCGYC 1 cut(s) 180
AfaI GTAC 6 cut(s) 695, 1089, 1374, 3370, 4062, 4571
AfiI CCNNNNNNNGG 6 cut(s) 116, 259, 371, 755, 3644, 4442
AjiI CACGTC 1 cut(s) 2704
AjnI CCWGG 8 cut(s) 324, 351, 595, 1397, 2832, 3597, 3911, 3950
Alw21I GWGCWC 3 cut(s) 219, 1538, 3418
AlwI GGATC 7 cut(s) 470, 1316, 1389, 1402, 1631, 2811, 4143
AlwNI CAGNNNCTG 4 cut(s) 416, 1049, 1814, 3254
Ama87I CYCGRG 3 cut(s) 218, 1749, 3999
ApoI RAATTY 6 cut(s) 643, 1271, 1365, 2625, 4082, 4616
ArsI GACNNNNNNTTYG 2 cut(s) 1142, 1174
AseI ATTAAT 1 cut(s) 1425
Asp700I GAANNNNTTC 5 cut(s) 820, 2751, 3074, 3102, 4616
AspLEI GCGC 6 cut(s) 153, 182, 200, 279, 4401, 4403
AspS9I GGNCC 8 cut(s) 104, 223, 1544, 2981, 3200, 3235, 4144, 4433
AsuC2I CCSGG 2 cut(s) 1156, 1238
AsuHPI GGTGA 6 cut(s) 679, 990, 1001, 4196, 4220, 4553
AvaI CYCGRG 3 cut(s) 218, 1749, 3999
AvaII GGWCC 3 cut(s) 223, 2981, 4144
AxyI CCTNAGG 1 cut(s) 3701
BamHI GGATCC 1 cut(s) 1394
BanI GGYRCC 4 cut(s) 179, 3601, 4449, 4550
BarI GAAGNNNNNNTAC 2 cut(s) 934, 966
BauI CACGAG 4 cut(s) 1989, 2559, 3807, 3879
BbsI GAAGAC 5 cut(s) 165, 298, 942, 1263, 2706
Bbv12I GWGCWC 3 cut(s) 219, 1538, 3418
BccI CCATC 6 cut(s) 33, 464, 488, 3056, 3400, 3748
BceAI ACGGC 5 cut(s) 115, 181, 320, 337, 385
BcgI CGANNNNNNTGC 6 cut(s) 196, 230, 3021, 3055, 4392, 4426
BciT130I CCWGG 8 cut(s) 326, 353, 597, 1399, 2834, 3599, 3913, 3952
BciVI GTATCC 1 cut(s) 593
BclI TGATCA 2 cut(s) 51, 3388
BcnI CCSGG 2 cut(s) 1156, 1238
BfaI CTAG 9 cut(s) 1083, 1434, 1788, 2183, 2360, 2649, 4233, 4238, 4251
BfmI CTRYAG 9 cut(s) 1041, 1050, 1806, 3108, 3972, 3990, 4011, 4139, 4173
BfoI RGCGCY 1 cut(s) 183
BfuAI ACCTGC 1 cut(s) 3574
BfuI GTATCC 1 cut(s) 593
BglI GCCNNNNNGGC 1 cut(s) 773
BglII AGATCT 3 cut(s) 1645, 1832, 4067
BlpI GCTNAGC 1 cut(s) 4260
Bme18I GGWCC 3 cut(s) 223, 2981, 4144
BmeT110I CYCGRG 3 cut(s) 218, 1749, 3999
BmgBI CACGTC 1 cut(s) 2704
BmgT120I GGNCC 8 cut(s) 104, 223, 1544, 2981, 3200, 3235, 4144, 4433
BmiI GGNNCC 9 cut(s) 181, 225, 385, 1210, 1396, 3603, 4146, 4451, 4552
BmrI ACTGGG 2 cut(s) 3185, 3799
BmuI ACTGGG 2 cut(s) 3185, 3799
BpiI GAAGAC 5 cut(s) 165, 298, 942, 1263, 2706
BplI GAGNNNNNCTC 1 cut(s) 28
BpmI CTGGAG 2 cut(s) 390, 1670
Bpu10I CCTNAGC 1 cut(s) 3417
Bpu1102I GCTNAGC 1 cut(s) 4260
BpuEI CTTGAG 7 cut(s) 2126, 2165, 2318, 2495, 2838, 2895, 3941
BpuMI CCSGG 2 cut(s) 1156, 1238
BsaBI GATNNNNATC 2 cut(s) 474, 861
BsaHI GRCGYC 1 cut(s) 180
BsaI GGTCTC 2 cut(s) 426, 2657
BsaJI CCNNGG 8 cut(s) 300, 1237, 1353, 1575, 3238, 3912, 4131, 4429
BsaWI WCCGGW 1 cut(s) 3567
BsaXI ACNNNNNCTCC 2 cut(s) 577, 607
Bsc4I CCNNNNNNNGG 6 cut(s) 116, 259, 371, 755, 3644, 4442
Bse118I RCCGGY 1 cut(s) 3202
Bse1I ACTGG 6 cut(s) 991, 2999, 3117, 3180, 3794, 4554
Bse21I CCTNAGG 1 cut(s) 3701
Bse3DI GCAATG 7 cut(s) 64, 550, 1077, 1687, 2848, 3873, 4117
Bse8I GATNNNNATC 2 cut(s) 474, 861
BseBI CCWGG 8 cut(s) 326, 353, 597, 1399, 2834, 3599, 3913, 3952
BseDI CCNNGG 8 cut(s) 300, 1237, 1353, 1575, 3238, 3912, 4131, 4429
BseJI GATNNNNATC 2 cut(s) 474, 861
BseLI CCNNNNNNNGG 6 cut(s) 116, 259, 371, 755, 3644, 4442
BseMI GCAATG 7 cut(s) 64, 550, 1077, 1687, 2848, 3873, 4117
BseNI ACTGG 6 cut(s) 991, 2999, 3117, 3180, 3794, 4554
BsePI GCGCGC 1 cut(s) 4399
BseRI GAGGAG 8 cut(s) 115, 118, 121, 124, 127, 193, 275, 3065
BseX3I CGGCCG 1 cut(s) 902
BseYI CCCAGC 1 cut(s) 3929
BsgI GTGCAG 1 cut(s) 3924
Bsh1236I CGCG 4 cut(s) 151, 198, 3786, 4401
Bsh1285I CGRYCG 1 cut(s) 905
BshNI GGYRCC 4 cut(s) 179, 3601, 4449, 4550
BsiEI CGRYCG 1 cut(s) 905
BsiHKAI GWGCWC 3 cut(s) 219, 1538, 3418
BsiHKCI CYCGRG 3 cut(s) 218, 1749, 3999
BsiSI CCGG 6 cut(s) 285, 768, 1156, 1237, 3203, 3568
BslFI GGGAC 2 cut(s) 209, 3028
BslI CCNNNNNNNGG 6 cut(s) 116, 259, 371, 755, 3644, 4442
BsmBI CGTCTC 2 cut(s) 235, 369
BsmFI GGGAC 2 cut(s) 209, 3028
BsmI GAATGC 2 cut(s) 16, 1682
Bso31I GGTCTC 2 cut(s) 426, 2657
BsoBI CYCGRG 3 cut(s) 218, 1749, 3999
Bsp1286I GDGCHC 3 cut(s) 219, 1538, 3418
Bsp1407I TGTACA 1 cut(s) 1372
Bsp1720I GCTNAGC 1 cut(s) 4260
Bsp68I TCGCGA 1 cut(s) 3786
BspFNI CGCG 4 cut(s) 151, 198, 3786, 4401
BspHI TCATGA 3 cut(s) 1633, 2926, 3391
BspLI GGNNCC 9 cut(s) 181, 225, 385, 1210, 1396, 3603, 4146, 4451, 4552
BspMAI CTGCAG 6 cut(s) 1045, 1054, 1810, 3976, 3994, 4015
BspMI ACCTGC 1 cut(s) 3574
BspPI GGATC 7 cut(s) 470, 1316, 1389, 1402, 1631, 2811, 4143
BspQI GCTCTTC 1 cut(s) 4129
BspT107I GGYRCC 4 cut(s) 179, 3601, 4449, 4550
BspTNI GGTCTC 2 cut(s) 426, 2657
BsrBI CCGCTC 3 cut(s) 36, 2536, 4268
BsrDI GCAATG 7 cut(s) 64, 550, 1077, 1687, 2848, 3873, 4117
BsrFI RCCGGY 1 cut(s) 3202
BsrGI TGTACA 1 cut(s) 1372
BsrI ACTGG 6 cut(s) 991, 2999, 3117, 3180, 3794, 4554
BssAI RCCGGY 1 cut(s) 3202
BssECI CCNNGG 8 cut(s) 300, 1237, 1353, 1575, 3238, 3912, 4131, 4429
BssHII GCGCGC 1 cut(s) 4399
BssNI GRCGYC 1 cut(s) 180
BssSI CACGAG 4 cut(s) 1989, 2559, 3807, 3879
BssT1I CCWWGG 3 cut(s) 1575, 3238, 4429
Bst2BI CACGAG 4 cut(s) 1989, 2559, 3807, 3879
Bst2UI CCWGG 8 cut(s) 326, 353, 597, 1399, 2834, 3599, 3913, 3952
Bst6I CTCTTC 8 cut(s) 2081, 2159, 2273, 2312, 2336, 2489, 3108, 4129
BstACI GRCGYC 1 cut(s) 180
BstAPI GCANNNNNTGC 1 cut(s) 1049
BstAUI TGTACA 1 cut(s) 1372
BstFNI CGCG 4 cut(s) 151, 198, 3786, 4401
BstH2I RGCGCY 1 cut(s) 183
BstHHI GCGC 6 cut(s) 153, 182, 200, 279, 4401, 4403
BstMCI CGRYCG 1 cut(s) 905
BstNI CCWGG 8 cut(s) 326, 353, 597, 1399, 2834, 3599, 3913, 3952
BstNSI RCATGY 4 cut(s) 2829, 2924, 3903, 4250
BstSFI CTRYAG 9 cut(s) 1041, 1050, 1806, 3108, 3972, 3990, 4011, 4139, 4173
BstUI CGCG 4 cut(s) 151, 198, 3786, 4401
BstV2I GAAGAC 5 cut(s) 165, 298, 942, 1263, 2706
BstX2I RGATCY 7 cut(s) 475, 1321, 1394, 1645, 1832, 4067, 4135
BstYI RGATCY 7 cut(s) 475, 1321, 1394, 1645, 1832, 4067, 4135
BstZI CGGCCG 1 cut(s) 902
Bsu36I CCTNAGG 1 cut(s) 3701
BsuI GTATCC 1 cut(s) 593
BtrI CACGTC 1 cut(s) 2704
BtsI GCAGTG 1 cut(s) 3981
BtsIMutI CAGTG 4 cut(s) 934, 2896, 3124, 3981
BtuMI TCGCGA 1 cut(s) 3786
BveI ACCTGC 1 cut(s) 3574
CaiI CAGNNNCTG 4 cut(s) 416, 1049, 1814, 3254
CciI TCATGA 3 cut(s) 1633, 2926, 3391
CfoI GCGC 6 cut(s) 153, 182, 200, 279, 4401, 4403
Cfr10I RCCGGY 1 cut(s) 3202
Cfr13I GGNCC 8 cut(s) 104, 223, 1544, 2981, 3200, 3235, 4144, 4433
CseI GACGC 1 cut(s) 3860
CsiI ACCWGGT 1 cut(s) 351
Csp6I GTAC 6 cut(s) 694, 1088, 1373, 3369, 4061, 4570
CviQI GTAC 6 cut(s) 694, 1088, 1373, 3369, 4061, 4570
DinI GGCGCC 1 cut(s) 181
DrdI GACNNNNNNGTC 2 cut(s) 353, 2708
DseDI GACNNNNNNGTC 2 cut(s) 353, 2708
EaeI YGGCCR 1 cut(s) 902
EagI CGGCCG 1 cut(s) 902
Eam1104I CTCTTC 8 cut(s) 2081, 2159, 2273, 2312, 2336, 2489, 3108, 4129
EarI CTCTTC 8 cut(s) 2081, 2159, 2273, 2312, 2336, 2489, 3108, 4129
EciI GGCGGA 3 cut(s) 387, 1732, 3977
EclXI CGGCCG 1 cut(s) 902
Eco130I CCWWGG 3 cut(s) 1575, 3238, 4429
Eco31I GGTCTC 2 cut(s) 426, 2657
Eco47I GGWCC 3 cut(s) 223, 2981, 4144
Eco52I CGGCCG 1 cut(s) 902
Eco57I CTGAAG 2 cut(s) 2114, 2306
Eco81I CCTNAGG 1 cut(s) 3701
Eco88I CYCGRG 3 cut(s) 218, 1749, 3999
EcoO109I RGGNCCY 3 cut(s) 223, 1544, 4144
EcoRII CCWGG 8 cut(s) 324, 351, 595, 1397, 2832, 3597, 3911, 3950
EcoT14I CCWWGG 3 cut(s) 1575, 3238, 4429
EgeI GGCGCC 1 cut(s) 181
EheI GGCGCC 1 cut(s) 181
ErhI CCWWGG 3 cut(s) 1575, 3238, 4429
Esp3I CGTCTC 2 cut(s) 235, 369
FaqI GGGAC 2 cut(s) 209, 3028
FauI CCCGC 2 cut(s) 114, 156
FauNDI CATATG 2 cut(s) 3796, 4574
FbaI TGATCA 2 cut(s) 51, 3388
FblI GTMKAC 1 cut(s) 943
FspBI CTAG 9 cut(s) 1083, 1434, 1788, 2183, 2360, 2649, 4233, 4238, 4251
FspI TGCGCA 1 cut(s) 278
GlaI GCGC 6 cut(s) 152, 181, 199, 278, 4400, 4402
GsaI CCCAGC 1 cut(s) 3933
GsuI CTGGAG 2 cut(s) 390, 1670
HaeII RGCGCY 1 cut(s) 183
HapII CCGG 6 cut(s) 285, 768, 1156, 1237, 3203, 3568
HgaI GACGC 1 cut(s) 3860
HhaI GCGC 6 cut(s) 153, 182, 200, 279, 4401, 4403
Hin1I GRCGYC 1 cut(s) 180
Hin6I GCGC 6 cut(s) 151, 180, 198, 277, 4399, 4401
HinP1I GCGC 6 cut(s) 151, 180, 198, 277, 4399, 4401
HincII GTYRAC 3 cut(s) 3307, 3514, 3763
HindII GTYRAC 3 cut(s) 3307, 3514, 3763
HindIII AAGCTT 4 cut(s) 396, 460, 658, 4605
HpaII CCGG 6 cut(s) 285, 768, 1156, 1237, 3203, 3568
HphI GGTGA 6 cut(s) 679, 990, 1001, 4196, 4220, 4553
Hpy166II GTNNAC 6 cut(s) 97, 944, 998, 3307, 3514, 3763
Hpy8I GTNNAC 6 cut(s) 97, 944, 998, 3307, 3514, 3763
Hpy99I CGWCG 8 cut(s) 92, 95, 248, 251, 323, 350, 395, 1665
HpyCH4IV ACGT 4 cut(s) 93, 1660, 2703, 4546
HpySE526I ACGT 4 cut(s) 93, 1660, 2703, 4546
Hsp92I GRCGYC 1 cut(s) 180
HspAI GCGC 6 cut(s) 151, 180, 198, 277, 4399, 4401
KasI GGCGCC 1 cut(s) 179
Ksp22I TGATCA 2 cut(s) 51, 3388
LguI GCTCTTC 1 cut(s) 4129
LmnI GCTCC 5 cut(s) 41, 287, 598, 2029, 3964
MabI ACCWGGT 1 cut(s) 351
MaeI CTAG 9 cut(s) 1083, 1434, 1788, 2183, 2360, 2649, 4233, 4238, 4251
MaeII ACGT 4 cut(s) 93, 1660, 2703, 4546
MaeIII GTNAC 6 cut(s) 583, 667, 741, 844, 1707, 1744
MbiI CCGCTC 3 cut(s) 36, 2536, 4268
MfeI CAATTG 1 cut(s) 1091
MflI RGATCY 7 cut(s) 475, 1321, 1394, 1645, 1832, 4067, 4135
MhlI GDGCHC 3 cut(s) 219, 1538, 3418
Mly113I GGCGCC 1 cut(s) 180
MmeI TCCRAC 2 cut(s) 414, 2460
MroXI GAANNNNTTC 5 cut(s) 820, 2751, 3074, 3102, 4616
MslI CAYNNNNRTG 2 cut(s) 2559, 2925
MspA1I CMGCKG 5 cut(s) 1215, 1361, 3491, 3848, 4259
MspI CCGG 6 cut(s) 285, 768, 1156, 1237, 3203, 3568
MunI CAATTG 1 cut(s) 1091
Mva1269I GAATGC 2 cut(s) 16, 1682
MvaI CCWGG 8 cut(s) 326, 353, 597, 1399, 2834, 3599, 3913, 3952
MvnI CGCG 4 cut(s) 151, 198, 3786, 4401
NarI GGCGCC 1 cut(s) 180
NciI CCSGG 2 cut(s) 1156, 1238
NdeI CATATG 2 cut(s) 3796, 4574
NlaIV GGNNCC 9 cut(s) 181, 225, 385, 1210, 1396, 3603, 4146, 4451, 4552
NmeAIII GCCGAG 1 cut(s) 4369
NmuCI GTSAC 4 cut(s) 667, 741, 844, 1744
NruI TCGCGA 1 cut(s) 3786
NsbI TGCGCA 1 cut(s) 278
NspI RCATGY 4 cut(s) 2829, 2924, 3903, 4250
PaeI GCATGC 1 cut(s) 2924
PaeR7I CTCGAG 3 cut(s) 218, 1749, 3999
PagI TCATGA 3 cut(s) 1633, 2926, 3391
PauI GCGCGC 1 cut(s) 4399
PciSI GCTCTTC 1 cut(s) 4129
PcsI WCGNNNNNNNCGW 3 cut(s) 225, 297, 315
PctI GAATGC 2 cut(s) 16, 1682
PdmI GAANNNNTTC 5 cut(s) 820, 2751, 3074, 3102, 4616
PflFI GACNNNGTC 2 cut(s) 353, 739
PflMI CCANNNNNTGG 1 cut(s) 3644
PfoI TCCNGGA 1 cut(s) 595
PluTI GGCGCC 1 cut(s) 183
PpuMI RGGWCCY 2 cut(s) 223, 4144
PshBI ATTAAT 1 cut(s) 1425
Psp5II RGGWCCY 2 cut(s) 223, 4144
Psp6I CCWGG 8 cut(s) 324, 351, 595, 1397, 2832, 3597, 3911, 3950
PspFI CCCAGC 1 cut(s) 3929
PspGI CCWGG 8 cut(s) 324, 351, 595, 1397, 2832, 3597, 3911, 3950
PspN4I GGNNCC 9 cut(s) 181, 225, 385, 1210, 1396, 3603, 4146, 4451, 4552
PspPI GGNCC 8 cut(s) 104, 223, 1544, 2981, 3200, 3235, 4144, 4433
PspPPI RGGWCCY 2 cut(s) 223, 4144
PspXI VCTCGAGB 1 cut(s) 218
PsrI GAACNNNNNNTAC 2 cut(s) 805, 837
PstI CTGCAG 6 cut(s) 1045, 1054, 1810, 3976, 3994, 4015
PstNI CAGNNNCTG 4 cut(s) 416, 1049, 1814, 3254
PsuI RGATCY 7 cut(s) 475, 1321, 1394, 1645, 1832, 4067, 4135
PsyI GACNNNGTC 2 cut(s) 353, 739
PteI GCGCGC 1 cut(s) 4399
PvuII CAGCTG 5 cut(s) 1215, 1361, 3491, 3848, 4259
RruI TCGCGA 1 cut(s) 3786
RsaI GTAC 6 cut(s) 695, 1089, 1374, 3370, 4062, 4571
RsaNI GTAC 6 cut(s) 694, 1088, 1373, 3369, 4061, 4570
RseI CAYNNNNRTG 2 cut(s) 2559, 2925
SapI GCTCTTC 1 cut(s) 4129
Sau96I GGNCC 8 cut(s) 104, 223, 1544, 2981, 3200, 3235, 4144, 4433
SduI GDGCHC 3 cut(s) 219, 1538, 3418
SexAI ACCWGGT 1 cut(s) 351
SfcI CTRYAG 9 cut(s) 1041, 1050, 1806, 3108, 3972, 3990, 4011, 4139, 4173
SfoI GGCGCC 1 cut(s) 181
Sfr274I CTCGAG 3 cut(s) 218, 1749, 3999
SinI GGWCC 3 cut(s) 223, 2981, 4144
SlaI CTCGAG 3 cut(s) 218, 1749, 3999
SmiMI CAYNNNNRTG 2 cut(s) 2559, 2925
SphI GCATGC 1 cut(s) 2924
SspDI GGCGCC 1 cut(s) 179
SspMI CTAG 9 cut(s) 1083, 1434, 1788, 2183, 2360, 2649, 4233, 4238, 4251
StyI CCWWGG 3 cut(s) 1575, 3238, 4429
TaiI ACGT 4 cut(s) 96, 1663, 2706, 4549
TaqII GACCGA 2 cut(s) 2681, 2966
TatI WGTACW 5 cut(s) 693, 1087, 1372, 4060, 4569
TauI GCSGC 6 cut(s) 66, 105, 242, 907, 2461, 4271
TscAI CASTG 4 cut(s) 934, 2896, 3124, 3981
TseFI GTSAC 4 cut(s) 667, 741, 844, 1744
Tsp45I GTSAC 4 cut(s) 667, 741, 844, 1744
TspGWI ACGGA 1 cut(s) 1726
TspRI CASTG 4 cut(s) 934, 2896, 3124, 3981
Tth111I GACNNNGTC 2 cut(s) 353, 739
Van91I CCANNNNNTGG 1 cut(s) 3644
VpaK11BI GGWCC 3 cut(s) 223, 2981, 4144
VspI ATTAAT 1 cut(s) 1425
XapI RAATTY 6 cut(s) 643, 1271, 1365, 2625, 4082, 4616
XbaI TCTAGA 3 cut(s) 1787, 2182, 2359
XceI RCATGY 4 cut(s) 2829, 2924, 3903, 4250
XhoI CTCGAG 3 cut(s) 218, 1749, 3999
XmiI GTMKAC 1 cut(s) 943
XmnI GAANNNNTTC 5 cut(s) 820, 2751, 3074, 3102, 4616
XspI CTAG 9 cut(s) 1083, 1434, 1788, 2183, 2360, 2649, 4233, 4238, 4251
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.