RchiOBHm_Chr2g0100991

Auxilin-like protein 1

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Reverse (-)
12760290 .. 12766623
6334 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ47561

Sequence Viewer

Length: 4467 bp
ATGGAGAACCTCTCGCATTCTCGCCATCCCAACCGCTCCGCTTCCAAAGTGATCAGCAATGGCGGCTTCCTCGCCAAGACCCTATACGACGACGTTTACGGCGGCCCGCCCAAGTTCGGCCTCTCCTCCTCCTCCTCCTCCCTCTCCCCGCGCCTCGAGGACTACGGAGAGATTTTCGGCGCCTTCCACGCCTCACGCGCCTCCTCGATTCCCGTGCTCGAGGTCCCCGTCGCCGCCTCCGCCGCCGACGACGACAATGAGGAGTTCTTCGATGTGCGCAGCTCCGGCTTCGACTACTCCGAGGTCTTCGGAGGCTTCGACGGCCTGGATTTCGCCGTCGCCTACGACGACCTGGTCAAGCAACCGTACGGCGGAGATGGTGGTTCCTCCGACGAAGCTTGGACTCCAGCAGAATCTGGGTCTCTCTCAGGAGAGTCGAATCATTCTGTCAAGAACCAAAGCTTTACAGATGGAGATCCTTACTATTCATTTGATGGCAGCTCTGAGTTTGGCATATCATATAACAAAGTTCATCAAAAAAGCAATAAAGAATCTTTGAATGGGAGGACTCATGCAAATCCGGTAACTGCTGCTCCTGGATACAGATATATGCCAGATGAAATTACTCCCGTGCAACAGACAAATTTCAACAATCAAAGCTTGCTGGTGACTGATGATAGAAAGTTCAATATGTACTCTAATGTGGAAATGGTAAATGAAAAGCATCTCAGAAAGACTGTGTCACACCCCCCTAATGGTAGTTCAGCCAGACAGGCTTATGGAGACAGCCATAAACCTGAAAAAGGATATGGTAGAAATGGTTCTCGTCATAAAGAGCCATTTGTAACTATATCGGATATAAATCTTAGAACTCAGCCCTCTCCTTTGCCACCACCCTGTCGGCCACCACCCATAGTTGATGACAACAGTGGAGATTCTGGTAGACTGTCTTCCAATTCTAACACTGTTTCTTCTGATGAGAGAACTGGTGATAGTTCACCCCCTTTCTTTGATGTAGAGGTAGATGCAAGTTCATCTGCTGCAGTCTCCGCAGCAGCTATGAAAGAAGCAATGGAGAAAGCTAGAGTACAATTGAGAAGTGCAAAGGAGTTAATGCAGAGGAAGAAAGAGGGTTACCGTAGTCGTTCAAAATCCCGGTCAAAGAAAGAAATAAAAGAGGAGGAAGTAAAGGTGGGTAAAGTTGCTGATGGTTCCAGCTGTAAGAAAGATGATAGAGTCCGGGGAACTTCTGAAAGAGAAGACAGTAGATTGAAATTTGCTGTTAGTGAGGAAACACAAAAGGTTTTGAAGAAAGTCAGAGAAGATCCAGAATCTTTAGGATATGAAAAATCTTCCGAGGCAGCTGAAAATCTTGTACAGGAGAAGCATGGGAAGGGATCCTGGTCATCTCAGGGGTCTTTCAAAATTAATGAAGCTAGTGAATGGCAAGAAGCAACGCAGTATTTTGAATTGGTGGCATTAGATGACACCAAGAAGGCTTTTGAGCAAGCAAACAAAGATGAGATTTTGGTTCAGAGCACAAAAGGGCATGAACAGAGACAGAAAGACAAAACAACCTTGGAAGTATTAGAGCAGCAAGAAACTGATAAAAAACTCAGAGCTGTTGTTGAAGTTCATGATCCAGAAGATCTGGAGAAGAAACATCGTGGATTGGAGGAATGCAATGCAAGATCAAAAGATGCTAAAGAGTCACGGAGGCGGAAAGAGCATGAAAAAAAGGAAAAAGTGACTCAAGAAACTTTTGAGAAGGGAGAGAATGAGATGAGTTCTAGAGTGGGCAAGCTGCCTGCAGAGTCTGAGAAGCAAAGAGGGAGATCTGTGAAATCAGACAAACATGAAAATATGGCAGAGGTTGAAGGTAAAGAAAGTAAGTTCAATGTTGAAAATGCTACGCAGCAGAAGGACAATGAAGCGAAGTTGCAAGAAAATGATAAATCAATTAGAATTGAGGAAAGACATAAGGAATCTCGTGGAATGGAAGGCATTGAAAACAGACAAGAGACTTTGGAGCAGGAAGAGAATGAAAGAAGGCTCATAGAGGCATTTAAACAAGCCGAAAATGAGAAGAGACTGAAGGAGGTTCTTGAGAAGGAAGAAAACGAGAAAAGGTTAAAGGAGGCTCTTGAGCAGGCAGAAAATGAGAAGAGGCTGAAAAAGGCTCTAGAGTTGCAAGAGAATGAGAAGAAATTAAAGGAGGCTCTCGAACGAGAAAACAAAAAGAGACAGAAAGAGGCTGCTCAAAGAGAAGAAAATGAGAAGCGGCTAAAAGAAGCTCTTGAGTTGGAAGAATATCAGAAGAGACAAAAGGATGCCCGTGAAAGAGAGGAAAATGAGCGGAGACTTAAAATGGCTCATTCTCATGAGCAGCAGTATGCCATAAAAAGATTGAAGGAGTCTCAGGAAAAAGCATTTAAGCAGGCAGAAATTCAACAAAAGTTAGATGAGGCTAGTGTGTCGGAAGAAACCGAAAAGAATATTAAAGTTGCTGATGACAGGGAAGATGTGGAAGTCCTAAATAAAACACAAAAGGGAACAGAGAGGAATGAAAATGTTCAGGAACTCAGGTCGGTTAAAAAAACACATTTGCACATGGAAGTAGAGGATCACAAGGTATCTGATGAGACATGCAACCAGGATTGCAATGAGAACTCTCAACCAACTCAAATAGCAAGAAACCATGATGAGAACAGTGAAACAATGAAGGAATTTCAAGAGGTGCATGCTCATGAAGAAAATGGAGAGAAAAAGACCAACAACAAAAATAGTGATACACAATCAGGTCCAGAAGTTGTTGAATCAGTAAATGTGTCGCTTGATTTAGAATACAAGGCATCTGCCTTGTCCCAAGAGGAGTTGGAAGATGGAGAGAAGCGGTTCAGAAGGAAAGATGCTAATGAATCTCTTCCTTTAGATTCCAGTGTGAAGAAAGCAAAAGAAGAAATTAGAGCTGAACCTAAAGTTAGGAAAAGAGAACTGGGGGGAGTTGAAACAAAAAATGGGCCGGTTGATGAGAAGTTCAAAGCAGCTGGCTTATCTGGCTTGGCCCAAGGAGGCACAGAATCTGGAAAAGGCCAATTCAGAATGGATGATGCCTATGAGTCAATTCCTTTTGTCAACTTTGTGAAGAAGGCAGTAGAAGCTAGCTCTGGCTTTGAAAAACCACAACCAATCAATAGTACCTCTCAAAAGGACTCTGATCATGAAACTCAAAAGATGGAATGTGCTCAGGAATGGAAAGAGAGAGAAAAGGACTCGAAGCAAGTCCATGCTTCCTCAAATCAGGAAGAAAACTTGGCAGCTGAACCTGTGAAAGAGTTTGTTGACAATAGAAGGAAAACAGAAGCAGCTCATCCGGCTATGGCAGAAATAAACAACCGGAAATCATCTCAGCAGGTCAATGCAAGCCAGGCATCAGAGTGGAAAGCTAAGAATCTTAAAGAAAATCCATTAAATAGGGAAAAAGAAAAAGAAAGGTTGAAAAGAGAAAGAGAGCTTGAAAATGATCGCCTTAGGAAGATTGAGGAAGAAAGAGAAAGGGAGAGGGAAAGAGAAAAGGACAGGATGGCTGTTGACAGGGCAACACTTGAAGCTCGCGACTGGGCATATGTGGAAGCTCGTGAGAGAGCAGAAAGGGTTGCTTTGGAGAGAGCAACAGCTGACGCTCGACAGAGAGCAATGGCAGAGGCTCGTGAAAGATTAGAGAAAGCATGTGCAGAGGCCAGGGAGAAGTCATTAGCTGGGAAGGCAGCTATGGAGGCCAGGCTCAAGGCGGAGCGTGCTGCAGTGGAGAGGGCAACTGCAGAGGCTCGAGAGCGTGCTGCAGAAAAACTAATGGCTGAAAGGGCTTCTTTTGAGACAAGAGAACGAGTACAAAGATCTGTTTCTGATAAATTTAGTGCATCTTCCAGAAATAATGGATTGAGACATTGCTCTTCATCCTCGGATCTACAGGACCCACAGAAATCAAGACACCCTTATTCTACAGCTTATGGTGAGAGATATGAAGGAGTTGAAGGTGAATCGGCTCAAAGGTGTAAAGCTAGACTAGAGAGACATGCTAGAACAGCTGAGCGAGCGGCAAAAGCTCTTGCGGAGAAGAATATGCGTGATCTTCTTGCACAAAGAGAGCAAGCAGAGAGAAATAGATTAGCCGAGACTCTGGATGCGGATGTTAAGAGGTGGTCCAGCGGAAAAGAGGGGAACTTGCGCGCATTACTTTCGACTTTGCAATATATCCTTGGGCCTGATAGTGGTTGGCACCCTATTCCCTTGACAGAAGTGATAACTGCTGCTGCTGTAAAGAGAGCTTACAGGAAAGCCACTCTTTGTGTTCATCCTGACAAATTACAACAACGTGGTGCCAGTATTCACCAGAAGTACATATGTGAAAAAGTTTTCGATCTTCTAAAGGAAGCTTGGAACAAATTCAACTCAGAAGAACGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1488

Amino Acids

169.3

Weight (kDa)

6.01

Isoelectric Point (pI)

48.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 353
AbsI CCTCGAGG 1 cut(s) 155
Acc16I TGCGCA 1 cut(s) 278
Acc36I ACCTGC 1 cut(s) 3403
AccB1I GGYRCC 3 cut(s) 179, 4278, 4379
AccBSI CCGCTC 3 cut(s) 36, 2356, 4097
AccI GTMKAC 1 cut(s) 943
AccII CGCG 4 cut(s) 151, 198, 3615, 4230
AclWI GGATC 7 cut(s) 470, 1319, 1392, 1405, 1634, 2631, 3972
AcoI YGGCCR 1 cut(s) 902
AcsI RAATTY 6 cut(s) 643, 1274, 2445, 2726, 3911, 4445
AcuI CTGAAG 1 cut(s) 2114
AcyI GRCGYC 1 cut(s) 180
AfaI GTAC 7 cut(s) 368, 695, 1089, 1377, 3199, 3891, 4400
AfiI CCNNNNNNNGG 5 cut(s) 116, 371, 755, 803, 4271
AjnI CCWGG 8 cut(s) 324, 351, 595, 1400, 2652, 3426, 3740, 3779
Alw21I GWGCWC 3 cut(s) 219, 1541, 3247
AlwI GGATC 7 cut(s) 470, 1319, 1392, 1405, 1634, 2631, 3972
AlwNI CAGNNNCTG 3 cut(s) 416, 1817, 3083
Ama87I CYCGRG 3 cut(s) 155, 218, 3828
ApoI RAATTY 6 cut(s) 643, 1274, 2445, 2726, 3911, 4445
ArsI GACNNNNNNTTYG 2 cut(s) 1142, 1174
AseI ATTAAT 1 cut(s) 1428
Asp700I GAANNNNTTC 5 cut(s) 820, 2571, 2894, 2922, 4445
AspLEI GCGC 6 cut(s) 153, 182, 200, 279, 4230, 4232
AspS9I GGNCC 8 cut(s) 104, 223, 2801, 3020, 3064, 3973, 4203, 4262
AsuC2I CCSGG 2 cut(s) 1156, 1241
AsuHPI GGTGA 6 cut(s) 679, 990, 1001, 4025, 4049, 4382
AsuNHI GCTAGC 1 cut(s) 3161
AvaI CYCGRG 3 cut(s) 155, 218, 3828
AvaII GGWCC 4 cut(s) 223, 2801, 3973, 4203
AxyI CCTNAGG 1 cut(s) 3530
BamHI GGATCC 1 cut(s) 1397
BanI GGYRCC 3 cut(s) 179, 4278, 4379
BarI GAAGNNNNNNTAC 2 cut(s) 934, 966
BauI CACGAG 3 cut(s) 1989, 3636, 3708
BbsI GAAGAC 3 cut(s) 298, 942, 1266
Bbv12I GWGCWC 3 cut(s) 219, 1541, 3247
BccI CCATC 8 cut(s) 33, 371, 464, 488, 1202, 2876, 3229, 3577
BceAI ACGGC 4 cut(s) 115, 320, 337, 385
BcgI CGANNNNNNTGC 4 cut(s) 196, 230, 4221, 4255
BciT130I CCWGG 8 cut(s) 326, 353, 597, 1402, 2654, 3428, 3742, 3781
BciVI GTATCC 1 cut(s) 593
BclI TGATCA 2 cut(s) 51, 3217
BcnI CCSGG 2 cut(s) 1156, 1241
BfaI CTAG 9 cut(s) 1083, 1437, 1791, 2183, 2469, 3162, 4062, 4067, 4080
BfmI CTRYAG 7 cut(s) 1041, 1809, 3801, 3819, 3840, 3968, 4002
BfoI RGCGCY 1 cut(s) 183
BfuAI ACCTGC 1 cut(s) 3403
BfuI GTATCC 1 cut(s) 593
BglI GCCNNNNNGGC 1 cut(s) 773
BglII AGATCT 3 cut(s) 1648, 1835, 3896
BlpI GCTNAGC 1 cut(s) 4089
Bme18I GGWCC 4 cut(s) 223, 2801, 3973, 4203
BmeT110I CYCGRG 3 cut(s) 155, 218, 3828
BmgT120I GGNCC 8 cut(s) 104, 223, 2801, 3020, 3064, 3973, 4203, 4262
BmiI GGNNCC 8 cut(s) 181, 225, 385, 1213, 1399, 3975, 4280, 4381
BmrI ACTGGG 2 cut(s) 3005, 3628
BmtI GCTAGC 1 cut(s) 3165
BmuI ACTGGG 2 cut(s) 3005, 3628
BpiI GAAGAC 3 cut(s) 298, 942, 1266
BplI GAGNNNNNCTC 1 cut(s) 28
BpmI CTGGAG 2 cut(s) 390, 1673
Bpu10I CCTNAGC 1 cut(s) 3246
Bpu1102I GCTNAGC 1 cut(s) 4089
BpuEI CTTGAG 5 cut(s) 1737, 2126, 2165, 2318, 3770
BpuMI CCSGG 2 cut(s) 1156, 1241
BsaBI GATNNNNATC 2 cut(s) 474, 861
BsaHI GRCGYC 1 cut(s) 180
BsaI GGTCTC 1 cut(s) 426
BsaJI CCNNGG 8 cut(s) 300, 1240, 1356, 1578, 3067, 3741, 3960, 4258
BsaWI WCCGGW 2 cut(s) 580, 3396
BsaXI ACNNNNNCTCC 2 cut(s) 577, 607
Bsc4I CCNNNNNNNGG 5 cut(s) 116, 371, 755, 803, 4271
Bse118I RCCGGY 1 cut(s) 3022
Bse1I ACTGG 5 cut(s) 991, 2937, 3000, 3623, 4383
Bse21I CCTNAGG 1 cut(s) 3530
Bse3DI GCAATG 6 cut(s) 64, 1077, 1690, 2668, 3702, 3946
Bse8I GATNNNNATC 2 cut(s) 474, 861
BseBI CCWGG 8 cut(s) 326, 353, 597, 1402, 2654, 3428, 3742, 3781
BseDI CCNNGG 8 cut(s) 300, 1240, 1356, 1578, 3067, 3741, 3960, 4258
BseGI GGATG 9 cut(s) 25, 2335, 3112, 3370, 3588, 3956, 4189, 4195, 4354
BseJI GATNNNNATC 2 cut(s) 474, 861
BseLI CCNNNNNNNGG 5 cut(s) 116, 371, 755, 803, 4271
BseMI GCAATG 6 cut(s) 64, 1077, 1690, 2668, 3702, 3946
BseNI ACTGG 5 cut(s) 991, 2937, 3000, 3623, 4383
BsePI GCGCGC 1 cut(s) 4228
BseRI GAGGAG 9 cut(s) 115, 118, 121, 124, 127, 193, 275, 1193, 2885
BseYI CCCAGC 1 cut(s) 3758
BsgI GTGCAG 1 cut(s) 3753
Bsh1236I CGCG 4 cut(s) 151, 198, 3615, 4230
BshNI GGYRCC 3 cut(s) 179, 4278, 4379
BsiHKAI GWGCWC 3 cut(s) 219, 1541, 3247
BsiHKCI CYCGRG 3 cut(s) 155, 218, 3828
BsiSI CCGG 7 cut(s) 285, 581, 1156, 1240, 3023, 3374, 3397
BsiWI CGTACG 1 cut(s) 366
BslFI GGGAC 2 cut(s) 209, 2848
BslI CCNNNNNNNGG 5 cut(s) 116, 371, 755, 803, 4271
BsmFI GGGAC 2 cut(s) 209, 2848
BsmI GAATGC 2 cut(s) 16, 1685
Bso31I GGTCTC 1 cut(s) 426
BsoBI CYCGRG 3 cut(s) 155, 218, 3828
Bsp1286I GDGCHC 3 cut(s) 219, 1541, 3247
Bsp1407I TGTACA 1 cut(s) 1375
Bsp1720I GCTNAGC 1 cut(s) 4089
Bsp68I TCGCGA 1 cut(s) 3615
BspFNI CGCG 4 cut(s) 151, 198, 3615, 4230
BspHI TCATGA 4 cut(s) 1636, 2380, 2746, 3220
BspLI GGNNCC 8 cut(s) 181, 225, 385, 1213, 1399, 3975, 4280, 4381
BspMAI CTGCAG 5 cut(s) 1045, 1813, 3805, 3823, 3844
BspMI ACCTGC 1 cut(s) 3403
BspOI GCTAGC 1 cut(s) 3165
BspPI GGATC 7 cut(s) 470, 1319, 1392, 1405, 1634, 2631, 3972
BspQI GCTCTTC 1 cut(s) 3958
BspT107I GGYRCC 3 cut(s) 179, 4278, 4379
BspTNI GGTCTC 1 cut(s) 426
BsrBI CCGCTC 3 cut(s) 36, 2356, 4097
BsrDI GCAATG 6 cut(s) 64, 1077, 1690, 2668, 3702, 3946
BsrFI RCCGGY 1 cut(s) 3022
BsrGI TGTACA 1 cut(s) 1375
BsrI ACTGG 5 cut(s) 991, 2937, 3000, 3623, 4383
BssAI RCCGGY 1 cut(s) 3022
BssECI CCNNGG 8 cut(s) 300, 1240, 1356, 1578, 3067, 3741, 3960, 4258
BssHII GCGCGC 1 cut(s) 4228
BssNI GRCGYC 1 cut(s) 180
BssSI CACGAG 3 cut(s) 1989, 3636, 3708
BssT1I CCWWGG 3 cut(s) 1578, 3067, 4258
Bst2BI CACGAG 3 cut(s) 1989, 3636, 3708
Bst2UI CCWGG 8 cut(s) 326, 353, 597, 1402, 2654, 3428, 3742, 3781
Bst4CI ACNGT 9 cut(s) 366, 739, 929, 948, 967, 1139, 1265, 2711, 4464
Bst6I CTCTTC 6 cut(s) 2031, 2081, 2159, 2312, 2928, 3958
BstACI GRCGYC 1 cut(s) 180
BstAUI TGTACA 1 cut(s) 1375
BstEII GGTNACC 1 cut(s) 1133
BstENI CCTNNNNNAGG 1 cut(s) 801
BstF5I GGATG 9 cut(s) 25, 2335, 3112, 3370, 3588, 3956, 4189, 4195, 4354
BstFNI CGCG 4 cut(s) 151, 198, 3615, 4230
BstH2I RGCGCY 1 cut(s) 183
BstHHI GCGC 6 cut(s) 153, 182, 200, 279, 4230, 4232
BstNI CCWGG 8 cut(s) 326, 353, 597, 1402, 2654, 3428, 3742, 3781
BstNSI RCATGY 4 cut(s) 2649, 2744, 3732, 4079
BstPI GGTNACC 1 cut(s) 1133
BstSFI CTRYAG 7 cut(s) 1041, 1809, 3801, 3819, 3840, 3968, 4002
BstUI CGCG 4 cut(s) 151, 198, 3615, 4230
BstV2I GAAGAC 3 cut(s) 298, 942, 1266
BstX2I RGATCY 7 cut(s) 475, 1324, 1397, 1648, 1835, 3896, 3964
BstYI RGATCY 7 cut(s) 475, 1324, 1397, 1648, 1835, 3896, 3964
Bsu36I CCTNAGG 1 cut(s) 3530
BsuI GTATCC 1 cut(s) 593
BtsCI GGATG 9 cut(s) 25, 2335, 3112, 3370, 3588, 3956, 4189, 4195, 4354
BtsI GCAGTG 1 cut(s) 3810
BtsIMutI CAGTG 5 cut(s) 934, 963, 2716, 2944, 3810
BtuMI TCGCGA 1 cut(s) 3615
BveI ACCTGC 1 cut(s) 3403
CaiI CAGNNNCTG 3 cut(s) 416, 1817, 3083
CciI TCATGA 4 cut(s) 1636, 2380, 2746, 3220
CfoI GCGC 6 cut(s) 153, 182, 200, 279, 4230, 4232
Cfr10I RCCGGY 1 cut(s) 3022
Cfr13I GGNCC 8 cut(s) 104, 223, 2801, 3020, 3064, 3973, 4203, 4262
CseI GACGC 1 cut(s) 3689
CsiI ACCWGGT 1 cut(s) 351
Csp6I GTAC 7 cut(s) 367, 694, 1088, 1376, 3198, 3890, 4399
CviQI GTAC 7 cut(s) 367, 694, 1088, 1376, 3198, 3890, 4399
DinI GGCGCC 1 cut(s) 181
DraI TTTAAA 1 cut(s) 2068
DrdI GACNNNNNNGTC 1 cut(s) 353
DseDI GACNNNNNNGTC 1 cut(s) 353
EaeI YGGCCR 1 cut(s) 902
Eam1104I CTCTTC 6 cut(s) 2031, 2081, 2159, 2312, 2928, 3958
EarI CTCTTC 6 cut(s) 2031, 2081, 2159, 2312, 2928, 3958
EciI GGCGGA 4 cut(s) 229, 387, 1735, 3806
Eco130I CCWWGG 3 cut(s) 1578, 3067, 4258
Eco31I GGTCTC 1 cut(s) 426
Eco47I GGWCC 4 cut(s) 223, 2801, 3973, 4203
Eco57I CTGAAG 1 cut(s) 2114
Eco81I CCTNAGG 1 cut(s) 3530
Eco88I CYCGRG 3 cut(s) 155, 218, 3828
Eco91I GGTNACC 1 cut(s) 1133
EcoNI CCTNNNNNAGG 1 cut(s) 801
EcoO109I RGGNCCY 2 cut(s) 223, 3973
EcoO65I GGTNACC 1 cut(s) 1133
EcoRII CCWGG 8 cut(s) 324, 351, 595, 1400, 2652, 3426, 3740, 3779
EcoT14I CCWWGG 3 cut(s) 1578, 3067, 4258
EgeI GGCGCC 1 cut(s) 181
EheI GGCGCC 1 cut(s) 181
ErhI CCWWGG 3 cut(s) 1578, 3067, 4258
FaqI GGGAC 2 cut(s) 209, 2848
FauI CCCGC 2 cut(s) 114, 156
FauNDI CATATG 2 cut(s) 3625, 4403
FbaI TGATCA 2 cut(s) 51, 3217
FblI GTMKAC 1 cut(s) 943
FokI GGATG 9 cut(s) 12, 2342, 3119, 3357, 3595, 3943, 4196, 4202, 4341
FspBI CTAG 9 cut(s) 1083, 1437, 1791, 2183, 2469, 3162, 4062, 4067, 4080
FspI TGCGCA 1 cut(s) 278
GlaI GCGC 6 cut(s) 152, 181, 199, 278, 4229, 4231
GsaI CCCAGC 1 cut(s) 3762
GsuI CTGGAG 2 cut(s) 390, 1673
HaeII RGCGCY 1 cut(s) 183
HapII CCGG 7 cut(s) 285, 581, 1156, 1240, 3023, 3374, 3397
HgaI GACGC 1 cut(s) 3689
HhaI GCGC 6 cut(s) 153, 182, 200, 279, 4230, 4232
Hin1I GRCGYC 1 cut(s) 180
Hin6I GCGC 6 cut(s) 151, 180, 198, 277, 4228, 4230
HinP1I GCGC 6 cut(s) 151, 180, 198, 277, 4228, 4230
HincII GTYRAC 3 cut(s) 3136, 3343, 3592
HindII GTYRAC 3 cut(s) 3136, 3343, 3592
HindIII AAGCTT 4 cut(s) 396, 460, 658, 4434
HpaII CCGG 7 cut(s) 285, 581, 1156, 1240, 3023, 3374, 3397
HphI GGTGA 6 cut(s) 679, 990, 1001, 4025, 4049, 4382
Hpy166II GTNNAC 6 cut(s) 97, 944, 998, 3136, 3343, 3592
Hpy8I GTNNAC 6 cut(s) 97, 944, 998, 3136, 3343, 3592
Hpy99I CGWCG 9 cut(s) 92, 95, 233, 251, 254, 323, 341, 350, 395
HpyCH4III ACNGT 9 cut(s) 366, 739, 929, 948, 967, 1139, 1265, 2711, 4464
HpyCH4IV ACGT 2 cut(s) 93, 4375
HpySE526I ACGT 2 cut(s) 93, 4375
Hsp92I GRCGYC 1 cut(s) 180
HspAI GCGC 6 cut(s) 151, 180, 198, 277, 4228, 4230
KasI GGCGCC 1 cut(s) 179
Ksp22I TGATCA 2 cut(s) 51, 3217
LguI GCTCTTC 1 cut(s) 3958
LmnI GCTCC 5 cut(s) 41, 287, 598, 2029, 3793
MabI ACCWGGT 1 cut(s) 351
MaeI CTAG 9 cut(s) 1083, 1437, 1791, 2183, 2469, 3162, 4062, 4067, 4080
MaeII ACGT 2 cut(s) 93, 4375
MaeIII GTNAC 7 cut(s) 583, 667, 741, 844, 1133, 1710, 1747
MbiI CCGCTC 3 cut(s) 36, 2356, 4097
MfeI CAATTG 1 cut(s) 1091
MflI RGATCY 7 cut(s) 475, 1324, 1397, 1648, 1835, 3896, 3964
MhlI GDGCHC 3 cut(s) 219, 1541, 3247
Mly113I GGCGCC 1 cut(s) 180
MmeI TCCRAC 4 cut(s) 414, 2283, 2457, 2856
MroXI GAANNNNTTC 5 cut(s) 820, 2571, 2894, 2922, 4445
MslI CAYNNNNRTG 3 cut(s) 2379, 2745, 3436
MspA1I CMGCKG 7 cut(s) 1218, 1364, 3047, 3320, 3677, 4088, 4209
MspI CCGG 7 cut(s) 285, 581, 1156, 1240, 3023, 3374, 3397
MunI CAATTG 1 cut(s) 1091
Mva1269I GAATGC 2 cut(s) 16, 1685
MvaI CCWGG 8 cut(s) 326, 353, 597, 1402, 2654, 3428, 3742, 3781
MvnI CGCG 4 cut(s) 151, 198, 3615, 4230
NarI GGCGCC 1 cut(s) 180
NciI CCSGG 2 cut(s) 1156, 1241
NdeI CATATG 2 cut(s) 3625, 4403
NheI GCTAGC 1 cut(s) 3161
NlaIV GGNNCC 8 cut(s) 181, 225, 385, 1213, 1399, 3975, 4280, 4381
NmeAIII GCCGAG 1 cut(s) 4198
NmuCI GTSAC 4 cut(s) 667, 741, 1710, 1747
NruI TCGCGA 1 cut(s) 3615
NsbI TGCGCA 1 cut(s) 278
NspI RCATGY 4 cut(s) 2649, 2744, 3732, 4079
PaeI GCATGC 1 cut(s) 2744
PaeR7I CTCGAG 3 cut(s) 155, 218, 3828
PagI TCATGA 4 cut(s) 1636, 2380, 2746, 3220
PauI GCGCGC 1 cut(s) 4228
PciSI GCTCTTC 1 cut(s) 3958
PcsI WCGNNNNNNNCGW 4 cut(s) 225, 297, 315, 345
PctI GAATGC 2 cut(s) 16, 1685
PdmI GAANNNNTTC 5 cut(s) 820, 2571, 2894, 2922, 4445
Pfl23II CGTACG 1 cut(s) 366
PflFI GACNNNGTC 2 cut(s) 353, 739
PfoI TCCNGGA 1 cut(s) 595
PluTI GGCGCC 1 cut(s) 183
PpuMI RGGWCCY 2 cut(s) 223, 3973
PshBI ATTAAT 1 cut(s) 1428
Psp5II RGGWCCY 2 cut(s) 223, 3973
Psp6I CCWGG 8 cut(s) 324, 351, 595, 1400, 2652, 3426, 3740, 3779
PspEI GGTNACC 1 cut(s) 1133
PspFI CCCAGC 1 cut(s) 3758
PspGI CCWGG 8 cut(s) 324, 351, 595, 1400, 2652, 3426, 3740, 3779
PspLI CGTACG 1 cut(s) 366
PspN4I GGNNCC 8 cut(s) 181, 225, 385, 1213, 1399, 3975, 4280, 4381
PspPI GGNCC 8 cut(s) 104, 223, 2801, 3020, 3064, 3973, 4203, 4262
PspPPI RGGWCCY 2 cut(s) 223, 3973
PspXI VCTCGAGB 2 cut(s) 155, 218
PsrI GAACNNNNNNTAC 2 cut(s) 805, 837
PstI CTGCAG 5 cut(s) 1045, 1813, 3805, 3823, 3844
PstNI CAGNNNCTG 3 cut(s) 416, 1817, 3083
PsuI RGATCY 7 cut(s) 475, 1324, 1397, 1648, 1835, 3896, 3964
PsyI GACNNNGTC 2 cut(s) 353, 739
PteI GCGCGC 1 cut(s) 4228
PvuII CAGCTG 6 cut(s) 1218, 1364, 3047, 3320, 3677, 4088
RruI TCGCGA 1 cut(s) 3615
RsaI GTAC 7 cut(s) 368, 695, 1089, 1377, 3199, 3891, 4400
RsaNI GTAC 7 cut(s) 367, 694, 1088, 1376, 3198, 3890, 4399
RseI CAYNNNNRTG 3 cut(s) 2379, 2745, 3436
SapI GCTCTTC 1 cut(s) 3958
Sau96I GGNCC 8 cut(s) 104, 223, 2801, 3020, 3064, 3973, 4203, 4262
SduI GDGCHC 3 cut(s) 219, 1541, 3247
SexAI ACCWGGT 1 cut(s) 351
SfcI CTRYAG 7 cut(s) 1041, 1809, 3801, 3819, 3840, 3968, 4002
SfoI GGCGCC 1 cut(s) 181
Sfr274I CTCGAG 3 cut(s) 155, 218, 3828
SinI GGWCC 4 cut(s) 223, 2801, 3973, 4203
SlaI CTCGAG 3 cut(s) 155, 218, 3828
SmiMI CAYNNNNRTG 3 cut(s) 2379, 2745, 3436
SmlI CTYRAG 8 cut(s) 155, 218, 1752, 2105, 2144, 2297, 3785, 3828
SmoI CTYRAG 8 cut(s) 155, 218, 1752, 2105, 2144, 2297, 3785, 3828
SphI GCATGC 1 cut(s) 2744
SspDI GGCGCC 1 cut(s) 179
SspI AATATT 1 cut(s) 2497
SspMI CTAG 9 cut(s) 1083, 1437, 1791, 2183, 2469, 3162, 4062, 4067, 4080
StyI CCWWGG 3 cut(s) 1578, 3067, 4258
TaaI ACNGT 9 cut(s) 366, 739, 929, 948, 967, 1139, 1265, 2711, 4464
TaiI ACGT 2 cut(s) 96, 4378
TatI WGTACW 5 cut(s) 693, 1087, 1375, 3889, 4398
TauI GCSGC 6 cut(s) 66, 105, 236, 245, 2284, 4100
TscAI CASTG 5 cut(s) 934, 970, 2716, 2944, 3810
TseFI GTSAC 4 cut(s) 667, 741, 1710, 1747
Tsp45I GTSAC 4 cut(s) 667, 741, 1710, 1747
TspGWI ACGGA 2 cut(s) 180, 1729
TspRI CASTG 5 cut(s) 934, 970, 2716, 2944, 3810
Tth111I GACNNNGTC 2 cut(s) 353, 739
VpaK11BI GGWCC 4 cut(s) 223, 2801, 3973, 4203
VspI ATTAAT 1 cut(s) 1428
XagI CCTNNNNNAGG 1 cut(s) 801
XapI RAATTY 6 cut(s) 643, 1274, 2445, 2726, 3911, 4445
XbaI TCTAGA 2 cut(s) 1790, 2182
XceI RCATGY 4 cut(s) 2649, 2744, 3732, 4079
XhoI CTCGAG 3 cut(s) 155, 218, 3828
XmiI GTMKAC 1 cut(s) 943
XmnI GAANNNNTTC 5 cut(s) 820, 2571, 2894, 2922, 4445
XspI CTAG 9 cut(s) 1083, 1437, 1791, 2183, 2469, 3162, 4062, 4067, 4080
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.