FvH4_1g21870

RNA recognition motif

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0001435
Physical Location & Seq
Forward (+)
13819388 .. 13822335
2948 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g21870.t1

Sequence Viewer

Length: 1287 bp
ATGGCGAAGCTCCAAACCTCCAAGAAGCGCCGCCTCGTCAAAACCGCCGATAAGACCCCGAAGCTCGAACCACAACCACCACAATCCGAACAAAACAATGACGAAGAAGAAGTAGACCTCCGCCACAAACAGCCCCAAACCGGGTCCGGTTCCGGGTCGGACTCCGACTCCGACTCCGACCCGTCCGAGTCCCTCTTCCAGCTCCTGGAGCCCTACTCCAAGGAGCAGCTCATCTCCCTCATAACCTCCGCCGCCTCCACCGACTCCTCCCTCCGCAAACGCATCCGCCGCGCCGCCGACGCCGACGTCTCCCACCGCAAGATCTTCGTCCACGGCCTCGGCTGGGACACCACCCGCGAAGTCCTCGTCTCCGCCTTCGAGCCTTTCGGCGAGGTCGAGGACTCCAATCTCGTCATGGACAAACTCACCGGAAAAGCCAAAGGCTACGGCTTCGTCCTCTTCAAGACCCGCCGCGCCGCCCTCAAAGCCCTAAGGGAGCCCAAGAAGACCATCGGCAACCGCTGCGCCTCCTGCCAGCTCGCCTCCGTCGGCCCCGGCACCAACACCAACACGGCGGCGCCGAGCGGCCAGTCGGAGTCCTACTCCGGGAGGAAGATTTACGTCAGCGGCGTGCCGCACGAGGCCGACGCCGAGAAATTGAGAGCTCTGTTTGTGAAATTTGGGGAAATCGAGACCGGGCCAATGGGGTTCGATTCGCAGACTGGAAAATGCCGAGGGTTTGCTTTGTTCTTGTACAAGACTGTTGAGGGTGCCAAGAAGGCGCTTGAGGAGCCGGTGAAGGTTTTCGAAGGGCATCAATTGAACTGCCAGAAGGCCACTGAGGGTTCTAAGAACAAGAACAATGCGGCTGCGCCGGCACAGCAAACGCAGGCTCCGCCGCTGGCACCGGTGCCTGGTGCGCAGAATATGGCATTTTTCGGACAGTATGCGGGATTGAATCCGTTGTATGGTGGGATGATGACCAGTATGGGAGGTGCATTGGTTCCTGGGACTGGTAACCCGGCTATGATGGCCCGGCCTTTGAATCCGGGTTTACTTGCTGGGGCATTGAATACTGGTGTTTTTCCAGCTGGACAGTATGGTCAGGTTGGTGCTGGGGGGTTCGGTGGTGTGTCTAATGGTATGGGGAGTTTTGGCCCGGGAGGTTCGTTGCTTGGGGCATACGGGACTATTGCACCGCTTCCTACAATGCAGAGTCTGCAGCAAGTTTATCCAAGTTCACAGCCGGGGCAGACGGCTACAGTTAGGCCTCAGGGGACTGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000375 GO:0000377 GO:0000398 GO:0003674 GO:0003676 GO:0003677 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006139 GO:0006351 GO:0006355 GO:0006366 GO:0006396 GO:0006397 GO:0006401 GO:0006417 GO:0006725 GO:0006807 GO:0007623 GO:0008150 GO:0008152 GO:0008380 GO:0009056 GO:0009057 GO:0009058 GO:0009059 GO:0009299 GO:0009889 GO:0009891 GO:0009893 GO:0009894 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010608 GO:0010628 GO:0010638 GO:0016070 GO:0016071 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0019439 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031329 GO:0031974 GO:0031981 GO:0032204 GO:0032206 GO:0032268 GO:0032270 GO:0032501 GO:0032774 GO:0032991 GO:0033043 GO:0033044 GO:0034248 GO:0034250 GO:0034641 GO:0034645 GO:0034654 GO:0034655 GO:0042162 GO:0042752 GO:0042789 GO:0043085 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043487 GO:0043488 GO:0043565 GO:0044093 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044260 GO:0044265 GO:0044270 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045727 GO:0045893 GO:0045935 GO:0046483 GO:0046700 GO:0048511 GO:0048518 GO:0048522 GO:0050789 GO:0050790 GO:0050794 GO:0051052 GO:0051054 GO:0051128 GO:0051130 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0051252 GO:0051254 GO:0051338 GO:0051347 GO:0051972 GO:0051973 GO:0060255 GO:0061013 GO:0065007 GO:0065008 GO:0065009 GO:0070013 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0097167 GO:0097659 GO:1901360 GO:1901361 GO:1901362 GO:1901363 GO:1901575 GO:1901576 GO:1902680 GO:1903311 GO:1903506 GO:1903508 GO:1904353 GO:1904355 GO:1905661 GO:1905663 GO:1990904 GO:2000112 GO:2000278 GO:2000573 GO:2001141 GO:2001252
KEGG Pathways
Metabolic & Signaling
ko03040 map03040
Pfam Domains
Protein Families
RRM_1

Protein Analysis

429

Amino Acids

45.2

Weight (kDa)

9.05

Isoelectric Point (pI)

43.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RRM_1 PF00076 108 - 175 1.6e-15 RNA recognition motif
RRM_1 PF00076 206 - 274 1.9e-09 RNA recognition motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 305, 1101
AatII GACGTC 1 cut(s) 309
Acc16I TGCGCA 1 cut(s) 921
AccB1I GGYRCC 5 cut(s) 557, 577, 770, 904, 910
AccB7I CCANNNNNTGG 1 cut(s) 205
AccBSI CCGCTC 1 cut(s) 585
AccI GTMKAC 1 cut(s) 114
AccII CGCG 3 cut(s) 291, 357, 474
AcoI YGGCCR 1 cut(s) 586
AcsI RAATTY 1 cut(s) 677
AcyI GRCGYC 4 cut(s) 300, 306, 578, 648
AfaI GTAC 1 cut(s) 755
AfiI CCNNNNNNNGG 9 cut(s) 140, 141, 153, 205, 343, 606, 914, 968, 1013
AgeI ACCGGT 1 cut(s) 907
AgsI TTSAA 5 cut(s) 463, 823, 958, 1045, 1072
AjnI CCWGG 3 cut(s) 204, 913, 1006
AluBI AGCT 7 cut(s) 10, 64, 202, 229, 538, 665, 1091
AluI AGCT 7 cut(s) 10, 64, 202, 229, 538, 665, 1091
Alw21I GWGCWC 1 cut(s) 667
Alw26I GTCTC 3 cut(s) 313, 373, 686
AlwNI CAGNNNCTG 2 cut(s) 205, 1219
Ama87I CYCGRG 1 cut(s) 1159
ApeKI GCWGC 4 cut(s) 226, 522, 869, 1222
ApoI RAATTY 1 cut(s) 677
ArsI GACNNNNNNTTYG 2 cut(s) 351, 383
AsiGI ACCGGT 1 cut(s) 907
Asp700I GAANNNNTTC 1 cut(s) 803
AspLEI GCGC 8 cut(s) 30, 293, 476, 527, 580, 784, 874, 922
AspS9I GGNCC 5 cut(s) 144, 551, 698, 1033, 1157
AsuHPI GGTGA 2 cut(s) 418, 808
AsuII TTCGAA 1 cut(s) 807
AvaI CYCGRG 1 cut(s) 1159
AvaII GGWCC 1 cut(s) 144
AxyI CCTNAGG 2 cut(s) 491, 1272
BanI GGYRCC 5 cut(s) 557, 577, 770, 904, 910
BanII GRGCYC 3 cut(s) 213, 501, 667
BauI CACGAG 1 cut(s) 638
BbsI GAAGAC 1 cut(s) 512
Bbv12I GWGCWC 1 cut(s) 667
BbvI GCAGC 4 cut(s) 238, 509, 856, 1234
BccI CCATC 2 cut(s) 518, 1024
BceAI ACGGC 4 cut(s) 349, 463, 588, 1272
BcgI CGANNNNNNTGC 2 cut(s) 307, 341
BciT130I CCWGG 3 cut(s) 206, 915, 1008
BcoDI GTCTC 3 cut(s) 313, 373, 686
BfmI CTRYAG 2 cut(s) 1220, 1260
BfoI RGCGCY 3 cut(s) 31, 581, 785
BglI GCCNNNNNGGC 1 cut(s) 779
BglII AGATCT 1 cut(s) 321
Bme18I GGWCC 1 cut(s) 144
BmeT110I CYCGRG 1 cut(s) 1159
BmgT120I GGNCC 5 cut(s) 144, 551, 698, 1033, 1157
BmsI GCATC 2 cut(s) 291, 823
BpiI GAAGAC 1 cut(s) 512
BplI GAGNNNNNCTC 4 cut(s) 200, 232, 587, 619
BpmI CTGGAG 1 cut(s) 227
Bpu14I TTCGAA 1 cut(s) 807
BpuEI CTTGAG 1 cut(s) 806
BsaHI GRCGYC 4 cut(s) 300, 306, 578, 648
BsaI GGTCTC 1 cut(s) 686
BsaJI CCNNGG 8 cut(s) 219, 331, 337, 553, 733, 1007, 1159, 1247
BsaWI WCCGGW 3 cut(s) 146, 428, 907
BsaXI ACNNNNNCTCC 6 cut(s) 152, 158, 182, 188, 877, 907
Bsc4I CCNNNNNNNGG 9 cut(s) 140, 141, 153, 205, 343, 606, 914, 968, 1013
Bse118I RCCGGY 3 cut(s) 793, 874, 907
Bse1I ACTGG 5 cut(s) 589, 727, 984, 1018, 1081
Bse21I CCTNAGG 2 cut(s) 491, 1272
BseBI CCWGG 3 cut(s) 206, 915, 1008
BseDI CCNNGG 8 cut(s) 219, 331, 337, 553, 733, 1007, 1159, 1247
BseGI GGATG 2 cut(s) 282, 981
BseLI CCNNNNNNNGG 9 cut(s) 140, 141, 153, 205, 343, 606, 914, 968, 1013
BseMII CTCAG 3 cut(s) 831, 1272, 1286
BseNI ACTGG 5 cut(s) 589, 727, 984, 1018, 1081
BseRI GAGGAG 2 cut(s) 256, 803
BseXI GCAGC 4 cut(s) 238, 509, 856, 1234
BseYI CCCAGC 3 cut(s) 342, 1061, 1115
Bsh1236I CGCG 3 cut(s) 291, 357, 474
BshNI GGYRCC 5 cut(s) 557, 577, 770, 904, 910
BshTI ACCGGT 1 cut(s) 907
BsiHKAI GWGCWC 1 cut(s) 667
BsiHKCI CYCGRG 1 cut(s) 1159
BslFI GGGAC 4 cut(s) 175, 359, 1024, 1201
BslI CCNNNNNNNGG 9 cut(s) 140, 141, 153, 205, 343, 606, 914, 968, 1013
BsmAI GTCTC 3 cut(s) 313, 373, 686
BsmBI CGTCTC 2 cut(s) 313, 373
BsmFI GGGAC 4 cut(s) 175, 359, 1024, 1201
Bso31I GGTCTC 1 cut(s) 686
BsoBI CYCGRG 1 cut(s) 1159
Bsp119I TTCGAA 1 cut(s) 807
Bsp1286I GDGCHC 3 cut(s) 213, 501, 667
Bsp1407I TGTACA 1 cut(s) 753
Bsp143I GATC 1 cut(s) 321
BspCNI CTCAG 3 cut(s) 832, 1273, 1285
BspFNI CGCG 3 cut(s) 291, 357, 474
BspMAI CTGCAG 1 cut(s) 1224
BspT104I TTCGAA 1 cut(s) 807
BspT107I GGYRCC 5 cut(s) 557, 577, 770, 904, 910
BspTNI GGTCTC 1 cut(s) 686
BsrBI CCGCTC 1 cut(s) 585
BsrFI RCCGGY 3 cut(s) 793, 874, 907
BsrGI TGTACA 1 cut(s) 753
BsrI ACTGG 5 cut(s) 589, 727, 984, 1018, 1081
BssAI RCCGGY 3 cut(s) 793, 874, 907
BssECI CCNNGG 8 cut(s) 219, 331, 337, 553, 733, 1007, 1159, 1247
BssMI GATC 1 cut(s) 321
BssNI GRCGYC 4 cut(s) 300, 306, 578, 648
BssSI CACGAG 1 cut(s) 638
BssT1I CCWWGG 1 cut(s) 219
Bst2BI CACGAG 1 cut(s) 638
Bst2UI CCWGG 3 cut(s) 206, 915, 1008
Bst4CI ACNGT 4 cut(s) 763, 945, 1098, 1264
Bst6I CTCTTC 2 cut(s) 200, 464
BstACI GRCGYC 4 cut(s) 300, 306, 578, 648
BstAPI GCANNNNNTGC 2 cut(s) 522, 1219
BstAUI TGTACA 1 cut(s) 753
BstBI TTCGAA 1 cut(s) 807
BstC8I GCNNGC 6 cut(s) 536, 540, 632, 876, 891, 903
BstDEI CTNAG 5 cut(s) 491, 840, 849, 1272, 1281
BstDSI CCRYGG 1 cut(s) 331
BstEII GGTNACC 1 cut(s) 1016
BstF5I GGATG 2 cut(s) 282, 981
BstFNI CGCG 3 cut(s) 291, 357, 474
BstH2I RGCGCY 3 cut(s) 31, 581, 785
BstHHI GCGC 8 cut(s) 30, 293, 476, 527, 580, 784, 874, 922
BstKTI GATC 1 cut(s) 324
BstMAI GTCTC 3 cut(s) 313, 373, 686
BstMBI GATC 1 cut(s) 321
BstNI CCWGG 3 cut(s) 206, 915, 1008
BstPI GGTNACC 1 cut(s) 1016
BstSFI CTRYAG 2 cut(s) 1220, 1260
BstUI CGCG 3 cut(s) 291, 357, 474
BstV1I GCAGC 4 cut(s) 238, 509, 856, 1234
BstV2I GAAGAC 1 cut(s) 512
BstX2I RGATCY 1 cut(s) 321
BstYI RGATCY 1 cut(s) 321
Bsu36I CCTNAGG 2 cut(s) 491, 1272
BtgI CCRYGG 1 cut(s) 331
BtsCI GGATG 2 cut(s) 282, 981
BtsIMutI CAGTG 1 cut(s) 837
Cac8I GCNNGC 6 cut(s) 536, 540, 632, 876, 891, 903
CaiI CAGNNNCTG 2 cut(s) 205, 1219
CfoI GCGC 8 cut(s) 30, 293, 476, 527, 580, 784, 874, 922
Cfr10I RCCGGY 3 cut(s) 793, 874, 907
Cfr13I GGNCC 5 cut(s) 144, 551, 698, 1033, 1157
Cfr9I CCCGGG 1 cut(s) 1159
CseI GACGC 2 cut(s) 308, 656
Csp6I GTAC 1 cut(s) 754
CspAI ACCGGT 1 cut(s) 907
CviAII CATG 1 cut(s) 415
CviQI GTAC 1 cut(s) 754
DdeI CTNAG 5 cut(s) 491, 840, 849, 1272, 1281
DinI GGCGCC 1 cut(s) 579
DpnI GATC 1 cut(s) 323
DpnII GATC 1 cut(s) 321
DrdI GACNNNNNNGTC 2 cut(s) 305, 1101
DseDI GACNNNNNNGTC 2 cut(s) 305, 1101
EaeI YGGCCR 1 cut(s) 586
Eam1104I CTCTTC 2 cut(s) 200, 464
EarI CTCTTC 2 cut(s) 200, 464
EciI GGCGGA 5 cut(s) 110, 238, 275, 361, 885
Ecl136II GAGCTC 1 cut(s) 665
Eco130I CCWWGG 1 cut(s) 219
Eco147I AGGCCT 1 cut(s) 1270
Eco24I GRGCYC 3 cut(s) 213, 501, 667
Eco31I GGTCTC 1 cut(s) 686
Eco47I GGWCC 1 cut(s) 144
Eco53kI GAGCTC 1 cut(s) 665
Eco81I CCTNAGG 2 cut(s) 491, 1272
Eco88I CYCGRG 1 cut(s) 1159
Eco91I GGTNACC 1 cut(s) 1016
EcoICRI GAGCTC 1 cut(s) 665
EcoO65I GGTNACC 1 cut(s) 1016
EcoRII CCWGG 3 cut(s) 204, 913, 1006
EcoT14I CCWWGG 1 cut(s) 219
EcoT38I GRGCYC 3 cut(s) 213, 501, 667
EgeI GGCGCC 1 cut(s) 579
EheI GGCGCC 1 cut(s) 579
ErhI CCWWGG 1 cut(s) 219
Esp3I CGTCTC 2 cut(s) 313, 373
FaeI CATG 1 cut(s) 418
FaqI GGGAC 4 cut(s) 175, 359, 1024, 1201
FatI CATG 1 cut(s) 414
FauI CCCGC 3 cut(s) 362, 476, 943
FblI GTMKAC 1 cut(s) 114
FokI GGATG 2 cut(s) 269, 988
FriOI GRGCYC 3 cut(s) 213, 501, 667
FspI TGCGCA 1 cut(s) 921
GlaI GCGC 8 cut(s) 29, 292, 475, 526, 579, 783, 873, 921
GsaI CCCAGC 3 cut(s) 346, 1065, 1119
GsuI CTGGAG 1 cut(s) 227
HaeII RGCGCY 3 cut(s) 31, 581, 785
HgaI GACGC 2 cut(s) 308, 656
HhaI GCGC 8 cut(s) 30, 293, 476, 527, 580, 784, 874, 922
Hin1I GRCGYC 4 cut(s) 300, 306, 578, 648
Hin1II CATG 1 cut(s) 418
Hin6I GCGC 8 cut(s) 28, 291, 474, 525, 578, 782, 872, 920
HinP1I GCGC 8 cut(s) 28, 291, 474, 525, 578, 782, 872, 920
HphI GGTGA 2 cut(s) 418, 808
Hpy166II GTNNAC 4 cut(s) 115, 331, 1055, 1241
Hpy188I TCNGA 8 cut(s) 88, 160, 166, 172, 178, 187, 595, 941
Hpy188III TCNNGA 2 cut(s) 463, 691
Hpy8I GTNNAC 4 cut(s) 115, 331, 1055, 1241
Hpy99I CGWCG 4 cut(s) 302, 308, 551, 650
HpyAV CCTTC 5 cut(s) 385, 772, 793, 803, 826
HpyCH4III ACNGT 4 cut(s) 763, 945, 1098, 1264
HpyCH4IV ACGT 2 cut(s) 306, 621
HpyCH4V TGCA 4 cut(s) 998, 1196, 1213, 1222
HpyF3I CTNAG 5 cut(s) 491, 840, 849, 1272, 1281
HpySE526I ACGT 2 cut(s) 306, 621
Hsp92I GRCGYC 4 cut(s) 300, 306, 578, 648
Hsp92II CATG 1 cut(s) 418
HspAI GCGC 8 cut(s) 28, 291, 474, 525, 578, 782, 872, 920
KasI GGCGCC 1 cut(s) 577
KroI GCCGGC 1 cut(s) 874
KroNI GCCGGC 1 cut(s) 876
Kzo9I GATC 1 cut(s) 321
LmnI GCTCC 7 cut(s) 15, 207, 208, 223, 496, 790, 898
Lsp1109I GCAGC 4 cut(s) 238, 509, 856, 1234
LweI GCATC 2 cut(s) 291, 823
MaeII ACGT 2 cut(s) 306, 621
MaeIII GTNAC 1 cut(s) 1016
MalI GATC 1 cut(s) 323
MbiI CCGCTC 1 cut(s) 585
MboI GATC 1 cut(s) 321
MboII GAAGA 7 cut(s) 116, 119, 187, 316, 451, 517, 625
MfeI CAATTG 1 cut(s) 818
MflI RGATCY 1 cut(s) 321
MhlI GDGCHC 3 cut(s) 213, 501, 667
MluCI AATT 3 cut(s) 656, 677, 818
Mly113I GGCGCC 1 cut(s) 578
MlyI GAGTC 8 cut(s) 155, 161, 167, 197, 257, 395, 605, 1225
MmeI TCCRAC 5 cut(s) 138, 189, 195, 201, 573
MroNI GCCGGC 1 cut(s) 874
MroXI GAANNNNTTC 1 cut(s) 803
MspA1I CMGCKG 4 cut(s) 522, 627, 901, 1091
MunI CAATTG 1 cut(s) 818
MvaI CCWGG 3 cut(s) 206, 915, 1008
MvnI CGCG 3 cut(s) 291, 357, 474
NaeI GCCGGC 1 cut(s) 876
NarI GGCGCC 1 cut(s) 578
NdeII GATC 1 cut(s) 321
NgoMIV GCCGGC 1 cut(s) 874
NlaIII CATG 1 cut(s) 418
NmeAIII GCCGAG 4 cut(s) 318, 606, 676, 758
NsbI TGCGCA 1 cut(s) 921
NspV TTCGAA 1 cut(s) 807
PceI AGGCCT 1 cut(s) 1270
PcsI WCGNNNNNNNCGW 3 cut(s) 393, 578, 627
PdiI GCCGGC 1 cut(s) 876
PdmI GAANNNNTTC 1 cut(s) 803
PfeI GAWTC 3 cut(s) 713, 958, 1045
PflMI CCANNNNNTGG 1 cut(s) 205
PfoI TCCNGGA 2 cut(s) 204, 605
PinAI ACCGGT 1 cut(s) 907
PleI GAGTC 8 cut(s) 155, 161, 167, 196, 257, 395, 604, 1224
PluTI GGCGCC 1 cut(s) 581
PpsI GAGTC 8 cut(s) 155, 161, 167, 196, 257, 395, 604, 1224
Psp124BI GAGCTC 1 cut(s) 667
Psp6I CCWGG 3 cut(s) 204, 913, 1006
PspEI GGTNACC 1 cut(s) 1016
PspFI CCCAGC 3 cut(s) 342, 1061, 1115
PspGI CCWGG 3 cut(s) 204, 913, 1006
PspPI GGNCC 5 cut(s) 144, 551, 698, 1033, 1157
PstI CTGCAG 1 cut(s) 1224
PstNI CAGNNNCTG 2 cut(s) 205, 1219
PsuI RGATCY 1 cut(s) 321
PvuII CAGCTG 1 cut(s) 1091
RsaI GTAC 1 cut(s) 755
RsaNI GTAC 1 cut(s) 754
SacI GAGCTC 1 cut(s) 667
Sau3AI GATC 1 cut(s) 321
Sau96I GGNCC 5 cut(s) 144, 551, 698, 1033, 1157
SchI GAGTC 8 cut(s) 155, 161, 167, 197, 257, 395, 605, 1225
SduI GDGCHC 3 cut(s) 213, 501, 667
SfaNI GCATC 2 cut(s) 291, 823
SfcI CTRYAG 2 cut(s) 1220, 1260
SfoI GGCGCC 1 cut(s) 579
SfuI TTCGAA 1 cut(s) 807
SgrAI CRCCGGYG 1 cut(s) 907
SinI GGWCC 1 cut(s) 144
SmaI CCCGGG 1 cut(s) 1161
SmlI CTYRAG 1 cut(s) 785
SmoI CTYRAG 1 cut(s) 785
Sse9I AATT 3 cut(s) 656, 677, 818
SseBI AGGCCT 1 cut(s) 1270
SspDI GGCGCC 1 cut(s) 577
SstI GAGCTC 1 cut(s) 667
StuI AGGCCT 1 cut(s) 1270
StyI CCWWGG 1 cut(s) 219
TaaI ACNGT 4 cut(s) 763, 945, 1098, 1264
TaiI ACGT 2 cut(s) 309, 624
TaqI TCGA 6 cut(s) 66, 378, 396, 690, 711, 807
TasI AATT 3 cut(s) 656, 677, 818
TatI WGTACW 1 cut(s) 753
TfiI GAWTC 3 cut(s) 713, 958, 1045
TscAI CASTG 1 cut(s) 844
TseI GCWGC 4 cut(s) 226, 522, 869, 1222
TspGWI ACGGA 2 cut(s) 535, 951
TspMI CCCGGG 1 cut(s) 1159
TspRI CASTG 1 cut(s) 844
Van91I CCANNNNNTGG 1 cut(s) 205
VpaK11BI GGWCC 1 cut(s) 144
XapI RAATTY 1 cut(s) 677
XcmI CCANNNNNNNNNTGG 1 cut(s) 412
XmaI CCCGGG 1 cut(s) 1159
XmiI GTMKAC 1 cut(s) 114
XmnI GAANNNNTTC 1 cut(s) 803
ZraI GACGTC 1 cut(s) 307
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.