UBP1-associated protein 2A-like
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 274 |
| AccB1I | GGYRCC | 1 cut(s) | 757 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1129 |
| AccII | CGCG | 1 cut(s) | 637 |
| AccIII | TCCGGA | 1 cut(s) | 453 |
| AcoI | YGGCCR | 4 cut(s) | 3, 120, 303, 1120 |
| AcsI | RAATTY | 2 cut(s) | 985, 1084 |
| AcyI | GRCGYC | 1 cut(s) | 731 |
| AfaI | GTAC | 5 cut(s) | 191, 233, 554, 785, 938 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 305, 648, 754, 909, 1129, 1199, 1405, 1406, 1469 |
| AgsI | TTSAA | 5 cut(s) | 296, 631, 661, 875, 1189 |
| AjiI | CACGTC | 1 cut(s) | 276 |
| AluBI | AGCT | 5 cut(s) | 19, 397, 656, 706, 841 |
| AluI | AGCT | 5 cut(s) | 19, 397, 656, 706, 841 |
| Alw21I | GWGCWC | 3 cut(s) | 1108, 1300, 1462 |
| Alw26I | GTCTC | 3 cut(s) | 242, 598, 1050 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 841, 1210 |
| Aor13HI | TCCGGA | 1 cut(s) | 453 |
| ApaI | GGGCCC | 1 cut(s) | 722 |
| ApoI | RAATTY | 2 cut(s) | 985, 1084 |
| AspLEI | GCGC | 2 cut(s) | 1198, 1267 |
| AsuC2I | CCSGG | 4 cut(s) | 643, 722, 764, 1193 |
| AsuHPI | GGTGA | 3 cut(s) | 350, 412, 569 |
| AvaII | GGWCC | 4 cut(s) | 391, 639, 1028, 1115 |
| BaeGI | GKGCMC | 4 cut(s) | 722, 762, 999, 1476 |
| BalI | TGGCCA | 2 cut(s) | 5, 1122 |
| BamHI | GGATCC | 3 cut(s) | 286, 450, 472 |
| BanI | GGYRCC | 1 cut(s) | 757 |
| BanII | GRGCYC | 2 cut(s) | 649, 722 |
| Bbv12I | GWGCWC | 3 cut(s) | 1108, 1300, 1462 |
| BbvCI | CCTCAGC | 2 cut(s) | 162, 410 |
| BccI | CCATC | 3 cut(s) | 986, 1123, 1345 |
| BceAI | ACGGC | 2 cut(s) | 364, 868 |
| BcnI | CCSGG | 4 cut(s) | 643, 722, 764, 1193 |
| BcoDI | GTCTC | 3 cut(s) | 242, 598, 1050 |
| BfaI | CTAG | 1 cut(s) | 1477 |
| BfoI | RGCGCY | 1 cut(s) | 1199 |
| BglII | AGATCT | 2 cut(s) | 489, 798 |
| Bme18I | GGWCC | 4 cut(s) | 391, 639, 1028, 1115 |
| BmgBI | CACGTC | 1 cut(s) | 276 |
| BmsI | GCATC | 1 cut(s) | 1181 |
| BpmI | CTGGAG | 1 cut(s) | 395 |
| Bpu10I | CCTNAGC | 2 cut(s) | 162, 410 |
| BpuMI | CCSGG | 4 cut(s) | 643, 722, 764, 1193 |
| BsaBI | GATNNNNATC | 2 cut(s) | 471, 828 |
| BsaHI | GRCGYC | 1 cut(s) | 731 |
| BsaI | GGTCTC | 1 cut(s) | 598 |
| BsaWI | WCCGGW | 3 cut(s) | 453, 483, 1088 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 173, 203 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 305, 648, 754, 909, 1129, 1199, 1405, 1406, 1469 |
| Bse118I | RCCGGY | 6 cut(s) | 49, 118, 305, 772, 1036, 1108 |
| Bse1I | ACTGG | 2 cut(s) | 290, 910 |
| Bse3DI | GCAATG | 2 cut(s) | 817, 1376 |
| Bse8I | GATNNNNATC | 2 cut(s) | 471, 828 |
| BseAI | TCCGGA | 1 cut(s) | 453 |
| BseGI | GGATG | 3 cut(s) | 349, 472, 696 |
| BseJI | GATNNNNATC | 2 cut(s) | 471, 828 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 305, 648, 754, 909, 1129, 1199, 1405, 1406, 1469 |
| BseMI | GCAATG | 2 cut(s) | 817, 1376 |
| BseMII | CTCAG | 4 cut(s) | 153, 401, 848, 1061 |
| BseNI | ACTGG | 2 cut(s) | 290, 910 |
| BseSI | GKGCMC | 4 cut(s) | 722, 762, 999, 1476 |
| BseX3I | CGGCCG | 1 cut(s) | 120 |
| BseYI | CCCAGC | 1 cut(s) | 768 |
| Bsh1236I | CGCG | 1 cut(s) | 637 |
| Bsh1285I | CGRYCG | 1 cut(s) | 123 |
| BshNI | GGYRCC | 1 cut(s) | 757 |
| BsiEI | CGRYCG | 1 cut(s) | 123 |
| BsiHKAI | GWGCWC | 3 cut(s) | 1108, 1300, 1462 |
| BslFI | GGGAC | 4 cut(s) | 527, 1014, 1128, 1267 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 305, 648, 754, 909, 1129, 1199, 1405, 1406, 1469 |
| BsmAI | GTCTC | 3 cut(s) | 242, 598, 1050 |
| BsmFI | GGGAC | 4 cut(s) | 527, 1014, 1128, 1267 |
| Bso31I | GGTCTC | 1 cut(s) | 598 |
| Bsp120I | GGGCCC | 1 cut(s) | 718 |
| Bsp1286I | GDGCHC | 8 cut(s) | 649, 722, 762, 999, 1108, 1300, 1462, 1476 |
| Bsp13I | TCCGGA | 1 cut(s) | 453 |
| Bsp1407I | TGTACA | 1 cut(s) | 936 |
| BspCNI | CTCAG | 4 cut(s) | 154, 402, 847, 1060 |
| BspEI | TCCGGA | 1 cut(s) | 453 |
| BspFNI | CGCG | 1 cut(s) | 637 |
| BspQI | GCTCTTC | 1 cut(s) | 210 |
| BspT107I | GGYRCC | 1 cut(s) | 757 |
| BspTNI | GGTCTC | 1 cut(s) | 598 |
| BsrDI | GCAATG | 2 cut(s) | 817, 1376 |
| BsrFI | RCCGGY | 6 cut(s) | 49, 118, 305, 772, 1036, 1108 |
| BsrGI | TGTACA | 1 cut(s) | 936 |
| BsrI | ACTGG | 2 cut(s) | 290, 910 |
| BssAI | RCCGGY | 6 cut(s) | 49, 118, 305, 772, 1036, 1108 |
| BssNI | GRCGYC | 1 cut(s) | 731 |
| BssT1I | CCWWGG | 2 cut(s) | 606, 1411 |
| Bst4CI | ACNGT | 7 cut(s) | 253, 259, 323, 434, 557, 1028, 1404 |
| Bst6I | CTCTTC | 7 cut(s) | 132, 150, 165, 198, 210, 632, 1420 |
| BstACI | GRCGYC | 1 cut(s) | 731 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 953, 1003 |
| BstAUI | TGTACA | 1 cut(s) | 936 |
| BstC8I | GCNNGC | 7 cut(s) | 51, 307, 700, 704, 708, 1221, 1237 |
| BstDEI | CTNAG | 5 cut(s) | 54, 162, 410, 834, 1047 |
| BstDSI | CCRYGG | 2 cut(s) | 300, 499 |
| BstF5I | GGATG | 3 cut(s) | 349, 472, 696 |
| BstFNI | CGCG | 1 cut(s) | 637 |
| BstH2I | RGCGCY | 1 cut(s) | 1199 |
| BstHHI | GCGC | 2 cut(s) | 1198, 1267 |
| BstMAI | GTCTC | 3 cut(s) | 242, 598, 1050 |
| BstMCI | CGRYCG | 1 cut(s) | 123 |
| BstNSI | RCATGY | 1 cut(s) | 238 |
| BstSLI | GKGCMC | 4 cut(s) | 722, 762, 999, 1476 |
| BstUI | CGCG | 1 cut(s) | 637 |
| BstX2I | RGATCY | 7 cut(s) | 286, 367, 450, 472, 489, 798, 829 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 506 |
| BstYI | RGATCY | 7 cut(s) | 286, 367, 450, 472, 489, 798, 829 |
| BstZI | CGGCCG | 1 cut(s) | 120 |
| BtgI | CCRYGG | 2 cut(s) | 300, 499 |
| BtrI | CACGTC | 1 cut(s) | 276 |
| BtsCI | GGATG | 3 cut(s) | 349, 472, 696 |
| BtsI | GCAGTG | 1 cut(s) | 1006 |
| BtsIMutI | CAGTG | 2 cut(s) | 903, 1006 |
| Cac8I | GCNNGC | 7 cut(s) | 51, 307, 700, 704, 708, 1221, 1237 |
| CaiI | CAGNNNCTG | 2 cut(s) | 841, 1210 |
| CfoI | GCGC | 2 cut(s) | 1198, 1267 |
| Cfr10I | RCCGGY | 6 cut(s) | 49, 118, 305, 772, 1036, 1108 |
| CpoI | CGGWCCG | 1 cut(s) | 639 |
| CseI | GACGC | 2 cut(s) | 643, 739 |
| Csp6I | GTAC | 5 cut(s) | 190, 232, 553, 784, 937 |
| CspI | CGGWCCG | 1 cut(s) | 639 |
| CviAII | CATG | 4 cut(s) | 235, 1052, 1301, 1436 |
| CviQI | GTAC | 5 cut(s) | 190, 232, 553, 784, 937 |
| DdeI | CTNAG | 5 cut(s) | 54, 162, 410, 834, 1047 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 274 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 274 |
| EaeI | YGGCCR | 4 cut(s) | 3, 120, 303, 1120 |
| EagI | CGGCCG | 1 cut(s) | 120 |
| Eam1104I | CTCTTC | 7 cut(s) | 132, 150, 165, 198, 210, 632, 1420 |
| EarI | CTCTTC | 7 cut(s) | 132, 150, 165, 198, 210, 632, 1420 |
| EciI | GGCGGA | 3 cut(s) | 437, 836, 1116 |
| EclXI | CGGCCG | 1 cut(s) | 120 |
| Eco130I | CCWWGG | 2 cut(s) | 606, 1411 |
| Eco147I | AGGCCT | 1 cut(s) | 41 |
| Eco24I | GRGCYC | 2 cut(s) | 649, 722 |
| Eco31I | GGTCTC | 1 cut(s) | 598 |
| Eco47I | GGWCC | 4 cut(s) | 391, 639, 1028, 1115 |
| Eco52I | CGGCCG | 1 cut(s) | 120 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1115, 1207 |
| EcoRI | GAATTC | 1 cut(s) | 1084 |
| EcoT14I | CCWWGG | 2 cut(s) | 606, 1411 |
| EcoT38I | GRGCYC | 2 cut(s) | 649, 722 |
| ErhI | CCWWGG | 2 cut(s) | 606, 1411 |
| FaeI | CATG | 4 cut(s) | 238, 1055, 1304, 1439 |
| FaqI | GGGAC | 4 cut(s) | 527, 1014, 1128, 1267 |
| FatI | CATG | 4 cut(s) | 234, 1051, 1300, 1435 |
| FauI | CCCGC | 1 cut(s) | 1105 |
| FauNDI | CATATG | 1 cut(s) | 1125 |
| FokI | GGATG | 3 cut(s) | 356, 479, 703 |
| FriOI | GRGCYC | 2 cut(s) | 649, 722 |
| FspBI | CTAG | 1 cut(s) | 1477 |
| GlaI | GCGC | 2 cut(s) | 1197, 1266 |
| GsaI | CCCAGC | 1 cut(s) | 772 |
| GsuI | CTGGAG | 1 cut(s) | 395 |
| HaeII | RGCGCY | 1 cut(s) | 1199 |
| HgaI | GACGC | 2 cut(s) | 643, 739 |
| HhaI | GCGC | 2 cut(s) | 1198, 1267 |
| Hin1I | GRCGYC | 1 cut(s) | 731 |
| Hin1II | CATG | 4 cut(s) | 238, 1055, 1304, 1439 |
| Hin6I | GCGC | 2 cut(s) | 1196, 1265 |
| HinP1I | GCGC | 2 cut(s) | 1196, 1265 |
| HindIII | AAGCTT | 1 cut(s) | 654 |
| HinfI | GANTC | 3 cut(s) | 23, 361, 403 |
| HphI | GGTGA | 3 cut(s) | 350, 412, 569 |
| Hpy166II | GTNNAC | 5 cut(s) | 499, 546, 786, 937, 1276 |
| Hpy188I | TCNGA | 9 cut(s) | 46, 445, 450, 477, 651, 683, 690, 781, 837 |
| Hpy188III | TCNNGA | 6 cut(s) | 365, 374, 454, 597, 631, 1422 |
| Hpy8I | GTNNAC | 5 cut(s) | 499, 546, 786, 937, 1276 |
| Hpy99I | CGWCG | 5 cut(s) | 95, 268, 280, 283, 733 |
| HpyAV | CCTTC | 4 cut(s) | 451, 872, 903, 1009 |
| HpyCH4III | ACNGT | 7 cut(s) | 253, 259, 323, 434, 557, 1028, 1404 |
| HpyCH4IV | ACGT | 1 cut(s) | 275 |
| HpyCH4V | TGCA | 6 cut(s) | 238, 573, 956, 1006, 1172, 1381 |
| HpyF3I | CTNAG | 5 cut(s) | 54, 162, 410, 834, 1047 |
| HpySE526I | ACGT | 1 cut(s) | 275 |
| Hsp92I | GRCGYC | 1 cut(s) | 731 |
| Hsp92II | CATG | 4 cut(s) | 238, 1055, 1304, 1439 |
| HspAI | GCGC | 2 cut(s) | 1196, 1265 |
| Kpn2I | TCCGGA | 1 cut(s) | 453 |
| KroI | GCCGGC | 2 cut(s) | 49, 305 |
| KroNI | GCCGGC | 2 cut(s) | 51, 307 |
| LguI | GCTCTTC | 1 cut(s) | 210 |
| LmnI | GCTCC | 7 cut(s) | 97, 376, 973, 1103, 1262, 1295, 1465 |
| LweI | GCATC | 1 cut(s) | 1181 |
| MaeI | CTAG | 1 cut(s) | 1477 |
| MaeII | ACGT | 1 cut(s) | 275 |
| MaeIII | GTNAC | 2 cut(s) | 253, 259 |
| MfeI | CAATTG | 1 cut(s) | 1020 |
| MflI | RGATCY | 7 cut(s) | 286, 367, 450, 472, 489, 798, 829 |
| MhlI | GDGCHC | 8 cut(s) | 649, 722, 762, 999, 1108, 1300, 1462, 1476 |
| MlsI | TGGCCA | 2 cut(s) | 5, 1122 |
| MluCI | AATT | 5 cut(s) | 870, 985, 1020, 1084, 1149 |
| MluNI | TGGCCA | 2 cut(s) | 5, 1122 |
| MlyI | GAGTC | 1 cut(s) | 412 |
| MmeI | TCCRAC | 3 cut(s) | 51, 423, 873 |
| Mox20I | TGGCCA | 2 cut(s) | 5, 1122 |
| MroI | TCCGGA | 1 cut(s) | 453 |
| MroNI | GCCGGC | 2 cut(s) | 49, 305 |
| MscI | TGGCCA | 2 cut(s) | 5, 1122 |
| MseI | TTAA | 2 cut(s) | 1041, 1158 |
| MslI | CAYNNNNRTG | 1 cut(s) | 435 |
| Msp20I | TGGCCA | 2 cut(s) | 5, 1122 |
| MspA1I | CMGCKG | 2 cut(s) | 397, 706 |
| MunI | CAATTG | 1 cut(s) | 1020 |
| MvnI | CGCG | 1 cut(s) | 637 |
| NaeI | GCCGGC | 2 cut(s) | 51, 307 |
| NciI | CCSGG | 4 cut(s) | 643, 722, 764, 1193 |
| NdeI | CATATG | 1 cut(s) | 1125 |
| NgoMIV | GCCGGC | 2 cut(s) | 49, 305 |
| NlaIII | CATG | 4 cut(s) | 238, 1055, 1304, 1439 |
| NmeAIII | GCCGAG | 1 cut(s) | 148 |
| NmuCI | GTSAC | 1 cut(s) | 259 |
| NspI | RCATGY | 1 cut(s) | 238 |
| PceI | AGGCCT | 1 cut(s) | 41 |
| PciSI | GCTCTTC | 1 cut(s) | 210 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 120, 272 |
| PdiI | GCCGGC | 2 cut(s) | 51, 307 |
| PfeI | GAWTC | 2 cut(s) | 23, 361 |
| PflFI | GACNNNGTC | 1 cut(s) | 637 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1129 |
| PfoI | TCCNGGA | 1 cut(s) | 1342 |
| PleI | GAGTC | 1 cut(s) | 411 |
| PpsI | GAGTC | 1 cut(s) | 411 |
| PpuMI | RGGWCCY | 1 cut(s) | 1115 |
| Psp5II | RGGWCCY | 1 cut(s) | 1115 |
| PspFI | CCCAGC | 1 cut(s) | 768 |
| PspOMI | GGGCCC | 1 cut(s) | 718 |
| PspPPI | RGGWCCY | 1 cut(s) | 1115 |
| PstNI | CAGNNNCTG | 2 cut(s) | 841, 1210 |
| PsuI | RGATCY | 7 cut(s) | 286, 367, 450, 472, 489, 798, 829 |
| PsyI | GACNNNGTC | 1 cut(s) | 637 |
| PvuII | CAGCTG | 2 cut(s) | 397, 706 |
| RsaI | GTAC | 5 cut(s) | 191, 233, 554, 785, 938 |
| RsaNI | GTAC | 5 cut(s) | 190, 232, 553, 784, 937 |
| RseI | CAYNNNNRTG | 1 cut(s) | 435 |
| Rsr2I | CGGWCCG | 1 cut(s) | 639 |
| RsrII | CGGWCCG | 1 cut(s) | 639 |
| SapI | GCTCTTC | 1 cut(s) | 210 |
| SaqAI | TTAA | 2 cut(s) | 1041, 1158 |
| SchI | GAGTC | 1 cut(s) | 412 |
| SduI | GDGCHC | 8 cut(s) | 649, 722, 762, 999, 1108, 1300, 1462, 1476 |
| SfaNI | GCATC | 1 cut(s) | 1181 |
| SgrAI | CRCCGGYG | 1 cut(s) | 1108 |
| SinI | GGWCC | 4 cut(s) | 391, 639, 1028, 1115 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 435 |
| Sse9I | AATT | 5 cut(s) | 870, 985, 1020, 1084, 1149 |
| SseBI | AGGCCT | 1 cut(s) | 41 |
| SspMI | CTAG | 1 cut(s) | 1477 |
| StuI | AGGCCT | 1 cut(s) | 41 |
| StyI | CCWWGG | 2 cut(s) | 606, 1411 |
| TaaI | ACNGT | 7 cut(s) | 253, 259, 323, 434, 557, 1028, 1404 |
| TaiI | ACGT | 1 cut(s) | 278 |
| TaqI | TCGA | 4 cut(s) | 21, 93, 144, 857 |
| TasI | AATT | 5 cut(s) | 870, 985, 1020, 1084, 1149 |
| TatI | WGTACW | 3 cut(s) | 231, 783, 936 |
| TauI | GCSGC | 6 cut(s) | 312, 330, 422, 670, 728, 979 |
| TfiI | GAWTC | 2 cut(s) | 23, 361 |
| Tru1I | TTAA | 2 cut(s) | 1041, 1158 |
| Tru9I | TTAA | 2 cut(s) | 1041, 1158 |
| TscAI | CASTG | 2 cut(s) | 910, 1013 |
| TseFI | GTSAC | 1 cut(s) | 259 |
| Tsp45I | GTSAC | 1 cut(s) | 259 |
| TspDTI | ATGAA | 1 cut(s) | 610 |
| TspGWI | ACGGA | 1 cut(s) | 563 |
| TspRI | CASTG | 2 cut(s) | 910, 1013 |
| Tth111I | GACNNNGTC | 1 cut(s) | 637 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1129 |
| VpaK11BI | GGWCC | 4 cut(s) | 391, 639, 1028, 1115 |
| XapI | RAATTY | 2 cut(s) | 985, 1084 |
| XceI | RCATGY | 1 cut(s) | 238 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 280, 1402 |
| XspI | CTAG | 1 cut(s) | 1477 |