Prupe.6G172000_v2.0.a1

UBP1-associated protein 2A-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0001435
Physical Location & Seq
Reverse (-)
17703282 .. 17708048
4767 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G172000.2

Sequence Viewer

Length: 1497 bp
ATGGGGAGAAAACGAAAGCTCGACGCCAACAACACCGAGTCCTCCGAGCCCTCCAAGAAACAACAACCGGTCGTTGAAGAAGAGGAACCCAAACCCCAAAACGAACCAGCAGAGGAAGTAGTCGAAGAAGAAGAAGAGGAAGAAGTTGAAGAAGAAGAAGAGGAGGAAGATGAACAGGAAGAAGACAAAGAAGATGAAGGAGAGGAAGAGGAAGAGGACGAGGATGAAGAAGAACCTGGTGTTGAGTATAAGCAAAACGAGAACGTGACGACGACGTCCACGTCGGCAGCTTCGGATCTGGCCGGTGACGGTGCCGACGAGGACGAGCCGATCCAGAATCTTCTAGAACCCTTCAGCAAGGACCAGCTTATTGCCCTGCTCCGCGAAGCAGCCGATACGCATGGTGACGTATCTGATCGGATCCGTAAGGTTGCAGATGAGGACCCGATCCACCGCAAGATCTTCGTCCACGGGCTCGGATGGGACACCAACGCCGAAACCCTAACCAGCGTGTTTAAGGAGTACGGTGAGATTGAGGATTGCAAGGCTGTGTGCGATAAGGTCTCTGGTAAGTCCAAGGGTTATGGCTTCATTCTTTTCAAGACTCGTTCTGGGGCTCGAAAAGCCCTAAAGCAGCCGCAGAAGAAGATCGGCAATCGTATGACTGCGTGCCAGCTGGCGGCTATTGGCCCAGGCCCGGCTCCGAGTACCGCTGCCGCTGTGCCTGTGGCGGTCCAGGCGGCCCAGTCACAGACAGTGTCGGAGTACACGCAGAGGAAGATCTATGTGAGCAATGTTGGGGCTGACTTGGAACCCCAGAAGCTGCTGATGTTCTTTTCTAGGTTTGGAGAAATTGAGGAAGGGCCACTGGGGCTTGATAAGATGACTGGGAGGCCTAAAGGATTTTGTTTGTTTGTGTATAAGTCGCCAGAGAGTGCAAAGAGGGCATTGGAAGAGCCGCACAAGAATTTTGACGGCCACATTTTGCATTGCCAGAAGGCTATTGACGGTCCAAAGCCGGTCAAGTCTCAGCACCCGAACCAGCACCACCACAAATCCCATAATTCCAAGTTTCAGAGGAATGAGAATCCGGGTTATGTTGGTGGAGCTGCGGCAGGAATGGGGCATTTGATGGCGCCAGCAAGTGGTGGGATTGGGTTTAACCAGGGTGCTGCGGCCGCCCAGGCATTGAATCCGGCACTTGGGCAGGCACTGACTGCATTGTTTGCGACTCAGGGGGCTGGTTTGGGGCTGACAAACCTTTTGGGAACTTTTGGAACGGCTCCGAATGTGAACCCGGGTGTTCCTGGAGCTGGACATGCCATACAGGGTGGGTATGCGAATCAGGCAAGTATAAGCCCTGGGATGATGGGAAGCTATGGAAATCAAGGTGCAATGCAAGGTGGCTACCCGAACCCGCAGATAGGACAAGGTGGTTCAGGAAGAGGGCAGCATGGTGTTGGGCAATCTGGTGGCGCTCCTTACTTGGGGCATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000122 GO:0001101 GO:0001837 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003730 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005667 GO:0005737 GO:0005829 GO:0005849 GO:0006139 GO:0006355 GO:0006357 GO:0006378 GO:0006379 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0007275 GO:0007568 GO:0008150 GO:0008152 GO:0008219 GO:0009058 GO:0009692 GO:0009693 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009888 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009894 GO:0009895 GO:0009987 GO:0010033 GO:0010150 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010558 GO:0010604 GO:0010605 GO:0010608 GO:0010628 GO:0010629 GO:0010817 GO:0016070 GO:0016071 GO:0017091 GO:0019219 GO:0019222 GO:0023052 GO:0030154 GO:0031123 GO:0031124 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0031329 GO:0031330 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032870 GO:0032991 GO:0033993 GO:0034641 GO:0042221 GO:0042445 GO:0042446 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043449 GO:0043450 GO:0043487 GO:0043488 GO:0043489 GO:0043631 GO:0044237 GO:0044238 GO:0044249 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0044798 GO:0045892 GO:0045893 GO:0045934 GO:0045935 GO:0046483 GO:0048255 GO:0048366 GO:0048367 GO:0048513 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048731 GO:0048762 GO:0048827 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051173 GO:0051252 GO:0051253 GO:0051254 GO:0051716 GO:0060255 GO:0060485 GO:0061013 GO:0065007 GO:0065008 GO:0070013 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0080090 GO:0090304 GO:0090305 GO:0090501 GO:0090575 GO:0090693 GO:0097159 GO:0097305 GO:0097306 GO:0099402 GO:1900673 GO:1900674 GO:1901360 GO:1901363 GO:1901576 GO:1901700 GO:1901701 GO:1902369 GO:1902373 GO:1902679 GO:1902680 GO:1903311 GO:1903312 GO:1903506 GO:1903507 GO:1903508 GO:1990904 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko03040 map03040
Pfam Domains
Protein Families
RRM_1

Protein Analysis

499

Amino Acids

53.23

Weight (kDa)

4.86

Isoelectric Point (pI)

51.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 274, 280
AatII GACGTC 1 cut(s) 278
AccB1I GGYRCC 2 cut(s) 311, 1135
AccB7I CCANNNNNTGG 1 cut(s) 1145
AccII CGCG 1 cut(s) 384
AclWI GGATC 5 cut(s) 303, 325, 415, 428, 442
AcoI YGGCCR 3 cut(s) 300, 976, 1176
AcsI RAATTY 1 cut(s) 967
AcuI CTGAAG 1 cut(s) 337
AcyI GRCGYC 3 cut(s) 24, 275, 1136
AfaI GTAC 3 cut(s) 524, 709, 767
AfiI CCNNNNNNNGG 7 cut(s) 679, 697, 1145, 1202, 1313, 1424, 1487
AgeI ACCGGT 1 cut(s) 67
AgsI TTSAA 4 cut(s) 77, 149, 601, 1192
AjiI CACGTC 1 cut(s) 282
AjnI CCWGG 7 cut(s) 235, 691, 735, 1164, 1182, 1306, 1360
AluBI AGCT 8 cut(s) 19, 290, 367, 676, 823, 1109, 1313, 1377
AluI AGCT 8 cut(s) 19, 290, 367, 676, 823, 1109, 1313, 1377
Alw26I GTCTC 2 cut(s) 568, 1032
AlwI GGATC 5 cut(s) 303, 325, 415, 428, 442
AlwNI CAGNNNCTG 2 cut(s) 823, 1213
Ama87I CYCGRG 1 cut(s) 1297
AoxI GGCC 8 cut(s) 300, 688, 694, 741, 863, 893, 976, 1176
ApeKI GCWGC 8 cut(s) 287, 389, 634, 713, 823, 1109, 1172, 1450
ApoI RAATTY 1 cut(s) 967
ArsI GACNNNNNNTTYG 2 cut(s) 1246, 1278
AsiGI ACCGGT 1 cut(s) 67
AspLEI GCGC 2 cut(s) 1138, 1478
AspS9I GGNCC 8 cut(s) 361, 442, 689, 695, 733, 742, 863, 1010
AsuC2I CCSGG 4 cut(s) 698, 1092, 1298, 1299
AsuHPI GGTGA 3 cut(s) 317, 416, 539
AvaI CYCGRG 1 cut(s) 1297
AvaII GGWCC 4 cut(s) 361, 442, 733, 1010
BamHI GGATCC 1 cut(s) 420
BanI GGYRCC 2 cut(s) 311, 1135
BanII GRGCYC 3 cut(s) 51, 477, 619
BbsI GAAGAC 1 cut(s) 189
BbvI GCAGC 8 cut(s) 299, 401, 646, 700, 810, 1096, 1159, 1462
BccI CCATC 3 cut(s) 474, 1126, 1363
BceAI ACGGC 2 cut(s) 991, 1296
BcgI CGANNNNNNTGC 2 cut(s) 445, 479
BciT130I CCWGG 7 cut(s) 237, 693, 737, 1166, 1184, 1308, 1362
BcnI CCSGG 4 cut(s) 698, 1092, 1298, 1299
BcoDI GTCTC 2 cut(s) 568, 1032
BfaI CTAG 2 cut(s) 344, 840
BfoI RGCGCY 2 cut(s) 1139, 1479
BglI GCCNNNNNGGC 2 cut(s) 871, 1184
BglII AGATCT 2 cut(s) 459, 780
Bme18I GGWCC 4 cut(s) 361, 442, 733, 1010
BmeT110I CYCGRG 1 cut(s) 1297
BmgBI CACGTC 1 cut(s) 282
BmgT120I GGNCC 8 cut(s) 361, 442, 689, 695, 733, 742, 863, 1010
BmiI GGNNCC 8 cut(s) 87, 313, 422, 444, 702, 813, 1137, 1284
BmrI ACTGGG 3 cut(s) 739, 878, 897
BmuI ACTGGG 3 cut(s) 739, 878, 897
BpiI GAAGAC 1 cut(s) 189
BpmI CTGGAG 1 cut(s) 1329
BpuMI CCSGG 4 cut(s) 698, 1092, 1298, 1299
BsaHI GRCGYC 3 cut(s) 24, 275, 1136
BsaI GGTCTC 1 cut(s) 568
BsaJI CCNNGG 8 cut(s) 469, 576, 691, 1165, 1182, 1297, 1360, 1361
BsaWI WCCGGW 1 cut(s) 67
Bsc4I CCNNNNNNNGG 7 cut(s) 679, 697, 1145, 1202, 1313, 1424, 1487
Bse118I RCCGGY 3 cut(s) 67, 302, 1018
Bse1I ACTGG 3 cut(s) 745, 873, 892
Bse3DI GCAATG 3 cut(s) 799, 988, 1401
BseBI CCWGG 7 cut(s) 237, 693, 737, 1166, 1184, 1308, 1362
BseDI CCNNGG 8 cut(s) 469, 576, 691, 1165, 1182, 1297, 1360, 1361
BseGI GGATG 3 cut(s) 229, 485, 1371
BseLI CCNNNNNNNGG 7 cut(s) 679, 697, 1145, 1202, 1313, 1424, 1487
BseMI GCAATG 3 cut(s) 799, 988, 1401
BseMII CTCAG 2 cut(s) 1043, 1247
BseNI ACTGG 3 cut(s) 745, 873, 892
BseRI GAGGAG 1 cut(s) 176
BseX3I CGGCCG 1 cut(s) 1176
BseXI GCAGC 8 cut(s) 299, 401, 646, 700, 810, 1096, 1159, 1462
Bsh1236I CGCG 1 cut(s) 384
Bsh1285I CGRYCG 2 cut(s) 72, 1179
BshFI GGCC 8 cut(s) 302, 690, 696, 743, 865, 895, 978, 1178
BshNI GGYRCC 2 cut(s) 311, 1135
BshTI ACCGGT 1 cut(s) 67
BsiEI CGRYCG 2 cut(s) 72, 1179
BsiHKCI CYCGRG 1 cut(s) 1297
BsiSI CCGG 7 cut(s) 68, 303, 698, 1019, 1091, 1196, 1298
BslFI GGGAC 1 cut(s) 497
BslI CCNNNNNNNGG 7 cut(s) 679, 697, 1145, 1202, 1313, 1424, 1487
BsmAI GTCTC 2 cut(s) 568, 1032
BsmFI GGGAC 1 cut(s) 497
BsnI GGCC 8 cut(s) 302, 690, 696, 743, 865, 895, 978, 1178
Bso31I GGTCTC 1 cut(s) 568
BsoBI CYCGRG 1 cut(s) 1297
Bsp1286I GDGCHC 3 cut(s) 51, 477, 619
Bsp143I GATC 8 cut(s) 295, 330, 415, 420, 447, 459, 648, 780
BspANI GGCC 8 cut(s) 302, 690, 696, 743, 865, 895, 978, 1178
BspCNI CTCAG 2 cut(s) 1042, 1246
BspFNI CGCG 1 cut(s) 384
BspLI GGNNCC 8 cut(s) 87, 313, 422, 444, 702, 813, 1137, 1284
BspPI GGATC 5 cut(s) 303, 325, 415, 428, 442
BspQI GCTCTTC 1 cut(s) 948
BspT107I GGYRCC 2 cut(s) 311, 1135
BspTNI GGTCTC 1 cut(s) 568
BsrDI GCAATG 3 cut(s) 799, 988, 1401
BsrFI RCCGGY 3 cut(s) 67, 302, 1018
BsrI ACTGG 3 cut(s) 745, 873, 892
BssAI RCCGGY 3 cut(s) 67, 302, 1018
BssECI CCNNGG 8 cut(s) 469, 576, 691, 1165, 1182, 1297, 1360, 1361
BssMI GATC 8 cut(s) 295, 330, 415, 420, 447, 459, 648, 780
BssNI GRCGYC 3 cut(s) 24, 275, 1136
BssT1I CCWWGG 1 cut(s) 576
Bst2UI CCWGG 7 cut(s) 237, 693, 737, 1166, 1184, 1308, 1362
Bst4CI ACNGT 4 cut(s) 311, 527, 757, 1010
Bst6I CTCTTC 7 cut(s) 75, 129, 153, 201, 207, 948, 1438
BstACI GRCGYC 3 cut(s) 24, 275, 1136
BstAPI GCANNNNNTGC 2 cut(s) 1217, 1226
BstC8I GCNNGC 5 cut(s) 670, 674, 678, 1140, 1209
BstDEI CTNAG 2 cut(s) 1029, 1233
BstDSI CCRYGG 1 cut(s) 469
BstF5I GGATG 3 cut(s) 229, 485, 1371
BstFNI CGCG 1 cut(s) 384
BstH2I RGCGCY 2 cut(s) 1139, 1479
BstHHI GCGC 2 cut(s) 1138, 1478
BstKTI GATC 8 cut(s) 298, 333, 418, 423, 450, 462, 651, 783
BstMAI GTCTC 2 cut(s) 568, 1032
BstMBI GATC 8 cut(s) 295, 330, 415, 420, 447, 459, 648, 780
BstMCI CGRYCG 2 cut(s) 72, 1179
BstNI CCWGG 7 cut(s) 237, 693, 737, 1166, 1184, 1308, 1362
BstNSI RCATGY 1 cut(s) 1322
BstUI CGCG 1 cut(s) 384
BstV1I GCAGC 8 cut(s) 299, 401, 646, 700, 810, 1096, 1159, 1462
BstV2I GAAGAC 1 cut(s) 189
BstX2I RGATCY 4 cut(s) 295, 420, 459, 780
BstYI RGATCY 4 cut(s) 295, 420, 459, 780
BstZI CGGCCG 1 cut(s) 1176
BsuRI GGCC 8 cut(s) 302, 690, 696, 743, 865, 895, 978, 1178
BtgI CCRYGG 1 cut(s) 469
BtrI CACGTC 1 cut(s) 282
BtsCI GGATG 3 cut(s) 229, 485, 1371
BtsIMutI CAGTG 3 cut(s) 762, 866, 1211
Cac8I GCNNGC 5 cut(s) 670, 674, 678, 1140, 1209
CaiI CAGNNNCTG 2 cut(s) 823, 1213
CciNI GCGGCCGC 1 cut(s) 1176
CfoI GCGC 2 cut(s) 1138, 1478
Cfr10I RCCGGY 3 cut(s) 67, 302, 1018
Cfr13I GGNCC 8 cut(s) 361, 442, 689, 695, 733, 742, 863, 1010
Cfr9I CCCGGG 1 cut(s) 1297
CseI GACGC 1 cut(s) 32
CsiI ACCWGGT 1 cut(s) 235
Csp6I GTAC 3 cut(s) 523, 708, 766
CspAI ACCGGT 1 cut(s) 67
CviAII CATG 3 cut(s) 401, 1319, 1454
CviQI GTAC 3 cut(s) 523, 708, 766
DdeI CTNAG 2 cut(s) 1029, 1233
DinI GGCGCC 1 cut(s) 1137
DpnI GATC 8 cut(s) 297, 332, 417, 422, 449, 461, 650, 782
DpnII GATC 8 cut(s) 295, 330, 415, 420, 447, 459, 648, 780
DrdI GACNNNNNNGTC 2 cut(s) 274, 280
DseDI GACNNNNNNGTC 2 cut(s) 274, 280
EaeI YGGCCR 3 cut(s) 300, 976, 1176
EagI CGGCCG 1 cut(s) 1176
Eam1104I CTCTTC 7 cut(s) 75, 129, 153, 201, 207, 948, 1438
EarI CTCTTC 7 cut(s) 75, 129, 153, 201, 207, 948, 1438
EclXI CGGCCG 1 cut(s) 1176
Eco130I CCWWGG 1 cut(s) 576
Eco147I AGGCCT 1 cut(s) 895
Eco24I GRGCYC 3 cut(s) 51, 477, 619
Eco31I GGTCTC 1 cut(s) 568
Eco47I GGWCC 4 cut(s) 361, 442, 733, 1010
Eco52I CGGCCG 1 cut(s) 1176
Eco57I CTGAAG 1 cut(s) 337
Eco88I CYCGRG 1 cut(s) 1297
EcoO109I RGGNCCY 1 cut(s) 442
EcoRII CCWGG 7 cut(s) 235, 691, 735, 1164, 1182, 1306, 1360
EcoT14I CCWWGG 1 cut(s) 576
EcoT38I GRGCYC 3 cut(s) 51, 477, 619
EgeI GGCGCC 1 cut(s) 1137
EheI GGCGCC 1 cut(s) 1137
ErhI CCWWGG 1 cut(s) 576
FaeI CATG 3 cut(s) 404, 1322, 1457
FaqI GGGAC 1 cut(s) 497
FatI CATG 3 cut(s) 400, 1318, 1453
FauI CCCGC 1 cut(s) 1425
FokI GGATG 3 cut(s) 236, 492, 1378
FriOI GRGCYC 3 cut(s) 51, 477, 619
FspBI CTAG 2 cut(s) 344, 840
GlaI GCGC 2 cut(s) 1137, 1477
GsuI CTGGAG 1 cut(s) 1329
HaeII RGCGCY 2 cut(s) 1139, 1479
HaeIII GGCC 8 cut(s) 302, 690, 696, 743, 865, 895, 978, 1178
HapII CCGG 7 cut(s) 68, 303, 698, 1019, 1091, 1196, 1298
HgaI GACGC 1 cut(s) 32
HhaI GCGC 2 cut(s) 1138, 1478
Hin1I GRCGYC 3 cut(s) 24, 275, 1136
Hin1II CATG 3 cut(s) 404, 1322, 1457
Hin6I GCGC 2 cut(s) 1136, 1476
HinP1I GCGC 2 cut(s) 1136, 1476
HinfI GANTC 7 cut(s) 38, 337, 604, 1087, 1192, 1231, 1342
HpaII CCGG 7 cut(s) 68, 303, 698, 1019, 1091, 1196, 1298
HphI GGTGA 3 cut(s) 317, 416, 539
Hpy166II GTNNAC 4 cut(s) 279, 469, 768, 1294
Hpy188I TCNGA 9 cut(s) 46, 295, 415, 420, 479, 705, 763, 1077, 1287
Hpy188III TCNNGA 4 cut(s) 334, 344, 601, 1440
Hpy8I GTNNAC 4 cut(s) 279, 469, 768, 1294
Hpy99I CGWCG 5 cut(s) 26, 274, 277, 286, 320
HpyAV CCTTC 4 cut(s) 191, 361, 854, 991
HpyCH4III ACNGT 4 cut(s) 311, 527, 757, 1010
HpyCH4IV ACGT 4 cut(s) 264, 275, 281, 408
HpyCH4V TGCA 7 cut(s) 434, 543, 938, 988, 1220, 1394, 1399
HpyF3I CTNAG 2 cut(s) 1029, 1233
HpySE526I ACGT 4 cut(s) 264, 275, 281, 408
Hsp92I GRCGYC 3 cut(s) 24, 275, 1136
Hsp92II CATG 3 cut(s) 404, 1322, 1457
HspAI GCGC 2 cut(s) 1136, 1476
KasI GGCGCC 1 cut(s) 1135
Kzo9I GATC 8 cut(s) 295, 330, 415, 420, 447, 459, 648, 780
LguI GCTCTTC 1 cut(s) 948
LmnI GCTCC 6 cut(s) 384, 706, 1106, 1288, 1310, 1483
Lsp1109I GCAGC 8 cut(s) 299, 401, 646, 700, 810, 1096, 1159, 1462
MabI ACCWGGT 1 cut(s) 235
MaeI CTAG 2 cut(s) 344, 840
MaeII ACGT 4 cut(s) 264, 275, 281, 408
MaeIII GTNAC 4 cut(s) 265, 305, 404, 747
MalI GATC 8 cut(s) 297, 332, 417, 422, 449, 461, 650, 782
MboI GATC 8 cut(s) 295, 330, 415, 420, 447, 459, 648, 780
MflI RGATCY 4 cut(s) 295, 420, 459, 780
MhlI GDGCHC 3 cut(s) 51, 477, 619
MluCI AATT 3 cut(s) 852, 967, 1063
Mly113I GGCGCC 1 cut(s) 1136
MlyI GAGTC 3 cut(s) 47, 598, 1225
MmeI TCCRAC 1 cut(s) 741
MseI TTAA 2 cut(s) 516, 1161
MspA1I CMGCKG 3 cut(s) 676, 713, 719
MspI CCGG 7 cut(s) 68, 303, 698, 1019, 1091, 1196, 1298
MvaI CCWGG 7 cut(s) 237, 693, 737, 1166, 1184, 1308, 1362
MvnI CGCG 1 cut(s) 384
NarI GGCGCC 1 cut(s) 1136
NciI CCSGG 4 cut(s) 698, 1092, 1298, 1299
NdeII GATC 8 cut(s) 295, 330, 415, 420, 447, 459, 648, 780
NlaIII CATG 3 cut(s) 404, 1322, 1457
NlaIV GGNNCC 8 cut(s) 87, 313, 422, 444, 702, 813, 1137, 1284
NmuCI GTSAC 4 cut(s) 265, 305, 404, 747
NotI GCGGCCGC 1 cut(s) 1176
NspI RCATGY 1 cut(s) 1322
PasI CCCWGGG 1 cut(s) 1361
PceI AGGCCT 1 cut(s) 895
PciSI GCTCTTC 1 cut(s) 948
PcsI WCGNNNNNNNCGW 2 cut(s) 278, 315
PfeI GAWTC 4 cut(s) 337, 1087, 1192, 1342
PflFI GACNNNGTC 2 cut(s) 274, 757
PflMI CCANNNNNTGG 1 cut(s) 1145
PfoI TCCNGGA 1 cut(s) 1306
PinAI ACCGGT 1 cut(s) 67
PleI GAGTC 3 cut(s) 46, 598, 1225
PluTI GGCGCC 1 cut(s) 1139
PpsI GAGTC 3 cut(s) 46, 598, 1225
PpuMI RGGWCCY 1 cut(s) 442
Psp5II RGGWCCY 1 cut(s) 442
Psp6I CCWGG 7 cut(s) 235, 691, 735, 1164, 1182, 1306, 1360
PspGI CCWGG 7 cut(s) 235, 691, 735, 1164, 1182, 1306, 1360
PspN4I GGNNCC 8 cut(s) 87, 313, 422, 444, 702, 813, 1137, 1284
PspPI GGNCC 8 cut(s) 361, 442, 689, 695, 733, 742, 863, 1010
PspPPI RGGWCCY 1 cut(s) 442
PstNI CAGNNNCTG 2 cut(s) 823, 1213
PsuI RGATCY 4 cut(s) 295, 420, 459, 780
PsyI GACNNNGTC 2 cut(s) 274, 757
PvuII CAGCTG 1 cut(s) 676
RsaI GTAC 3 cut(s) 524, 709, 767
RsaNI GTAC 3 cut(s) 523, 708, 766
SapI GCTCTTC 1 cut(s) 948
SaqAI TTAA 2 cut(s) 516, 1161
Sau3AI GATC 8 cut(s) 295, 330, 415, 420, 447, 459, 648, 780
Sau96I GGNCC 8 cut(s) 361, 442, 689, 695, 733, 742, 863, 1010
SchI GAGTC 3 cut(s) 47, 598, 1225
SduI GDGCHC 3 cut(s) 51, 477, 619
SexAI ACCWGGT 1 cut(s) 235
SfoI GGCGCC 1 cut(s) 1137
SinI GGWCC 4 cut(s) 361, 442, 733, 1010
SmaI CCCGGG 1 cut(s) 1299
Sse9I AATT 3 cut(s) 852, 967, 1063
SseBI AGGCCT 1 cut(s) 895
SspDI GGCGCC 1 cut(s) 1135
SspMI CTAG 2 cut(s) 344, 840
StuI AGGCCT 1 cut(s) 895
StyI CCWWGG 1 cut(s) 576
TaaI ACNGT 4 cut(s) 311, 527, 757, 1010
TaiI ACGT 4 cut(s) 267, 278, 284, 411
TaqI TCGA 3 cut(s) 21, 123, 619
TasI AATT 3 cut(s) 852, 967, 1063
TatI WGTACW 1 cut(s) 765
TauI GCSGC 8 cut(s) 640, 683, 719, 743, 961, 1115, 1178, 1181
TfiI GAWTC 4 cut(s) 337, 1087, 1192, 1342
Tru1I TTAA 2 cut(s) 516, 1161
Tru9I TTAA 2 cut(s) 516, 1161
TscAI CASTG 3 cut(s) 762, 873, 1218
TseFI GTSAC 4 cut(s) 265, 305, 404, 747
TseI GCWGC 8 cut(s) 287, 389, 634, 713, 823, 1109, 1172, 1450
Tsp45I GTSAC 4 cut(s) 265, 305, 404, 747
TspDTI ATGAA 4 cut(s) 186, 210, 240, 580
TspGWI ACGGA 1 cut(s) 413
TspMI CCCGGG 1 cut(s) 1297
TspRI CASTG 3 cut(s) 762, 873, 1218
Tth111I GACNNNGTC 2 cut(s) 274, 757
Van91I CCANNNNNTGG 1 cut(s) 1145
VpaK11BI GGWCC 4 cut(s) 361, 442, 733, 1010
XapI RAATTY 1 cut(s) 967
XbaI TCTAGA 1 cut(s) 343
XceI RCATGY 1 cut(s) 1322
XmaI CCCGGG 1 cut(s) 1297
XspI CTAG 2 cut(s) 344, 840
ZraI GACGTC 1 cut(s) 276
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.