Rroxscaffold_2G00127740

RNA recognition motif

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0001435
Physical Location & Seq
Reverse (-)
63333162 .. 63336071
2910 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00127740.1

Sequence Viewer

Length: 1311 bp
ATGGCCAAGATCCAAACCACCAAGAAGCGCAGGCTCGTCAAAACCGCCGACAAAAACCTCGACAAAACCCCCAAAGCCCCAAAGCTCGAACCAAAACAAGAACAAGAACACGAACACAACGACGACCTCCGCCACAAACAGCCCCAAACCGGGTCGGACTCGGACTCGGACTCCGACACGGAGACCCTGTCCCAGCTCCTGGAGCCCTACTCCAAGGAGCAGCTCATCTCTCTCATAACTGACGCCGCCTCCAACGACTCCTCCCTCTTCAAACGCATCCGCGACGCCGCCGACGCCGACGTCTCGCACCGCAAGATATTCGTCCACGGCCTCGGATGGGACACCACCCGCGAAACCCTAGTCTCCGCCTTCCAGCCCTACGGCGACGTCGAGGACTCTAATCTGGTAATGGACAAGCTCACCGGCAAGACCAAAGGCTACGGCTTCGTCCTCTTCAAGACCCGCCGCGGCGCCCTCAAGGCCTTGAAGGAGCCCAAGAAGAGCATCGGCAACCGCAGCGCCTCCTGCCAGCTGGCCTCGGTGGGCCCGGGGAACAATACGGCGGCGCCGTCTTCGTCGTCGAGTGGCGGCCAGTCGGACTCGGCCGGGAGGAAGATTTACGTCAGCGGCGTGCCGCATGAGGCCGACGCCGAGAAATTGAGGGCTTTGTTTGGGAGATTTGGGGAAATTGAGACCGGGCCGATGGGGTTCGATTCGCAGACCGGAAAGTCTAGAGGGTTTGCTTTGTTCTTGTACAAGAGTGTGGAAGGTGCAAAGAAGGCACTTGAGGAACCGGTGAAGGTGTTTGAAGGGCACCAATTGAACTGCCAGAAGGCCACTGAGGGGTCAAAGAACAAGAATGCCGTGGCGCTGGCACAGCAGCAGACGCAGGCTCCGCCACTGGCCGCGGTGCCCGGGGCGCAGAATATGGCGTTTTTCGGACAGTACCCGGGATTGAATCCGTTGTATGGTGGATTGATGACCAATGTAGGAGGTGCATTGGTTCCTGGGTCTGGTAACCCGGCTATGATGGCCCGGCCGTTGAACCCGGGTTTACTGGCGGGGGCATTGAACCCTGGTGTGTTTCCAGCTGGACAGTATGGTCAGGTGGGTGCTGGTGTTGGTGGGTTTGGTGGTGTGTCTCATGGGATGGGGAGTTTCGGTGGGGGAGGCTCGTTGCTTGGCGCATACGGGTCAATTGCACCGATTCCTGCAATGCAGAGTCTGCAGCATGTTTATCCAAGTTCACAGACGGGGCAGACGGCTACAGTTAGGCCTCAGGGGACTAATGGGTACCAACCGTATATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000375 GO:0000377 GO:0000398 GO:0003674 GO:0003676 GO:0003677 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006139 GO:0006351 GO:0006355 GO:0006366 GO:0006396 GO:0006397 GO:0006401 GO:0006417 GO:0006725 GO:0006807 GO:0007623 GO:0008150 GO:0008152 GO:0008380 GO:0009056 GO:0009057 GO:0009058 GO:0009059 GO:0009299 GO:0009889 GO:0009891 GO:0009893 GO:0009894 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010608 GO:0010628 GO:0010638 GO:0016070 GO:0016071 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0019439 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031329 GO:0031974 GO:0031981 GO:0032204 GO:0032206 GO:0032268 GO:0032270 GO:0032501 GO:0032774 GO:0032991 GO:0033043 GO:0033044 GO:0034248 GO:0034250 GO:0034641 GO:0034645 GO:0034654 GO:0034655 GO:0042162 GO:0042752 GO:0042789 GO:0043085 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043487 GO:0043488 GO:0043565 GO:0044093 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044260 GO:0044265 GO:0044270 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045727 GO:0045893 GO:0045935 GO:0046483 GO:0046700 GO:0048511 GO:0048518 GO:0048522 GO:0050789 GO:0050790 GO:0050794 GO:0051052 GO:0051054 GO:0051128 GO:0051130 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0051252 GO:0051254 GO:0051338 GO:0051347 GO:0051972 GO:0051973 GO:0060255 GO:0061013 GO:0065007 GO:0065008 GO:0065009 GO:0070013 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0097167 GO:0097659 GO:1901360 GO:1901361 GO:1901362 GO:1901363 GO:1901575 GO:1901576 GO:1902680 GO:1903311 GO:1903506 GO:1903508 GO:1904353 GO:1904355 GO:1905661 GO:1905663 GO:1990904 GO:2000112 GO:2000278 GO:2000573 GO:2001141 GO:2001252
KEGG Pathways
Metabolic & Signaling
ko03040 map03040
Pfam Domains
Protein Families
RRM_1

Protein Analysis

436

Amino Acids

45.99

Weight (kDa)

9.19

Isoelectric Point (pI)

37.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RRM_1 PF00076 106 - 172 2.1e-15 RNA recognition motif
RRM_1 PF00076 206 - 274 4.2e-10 RNA recognition motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 3 cut(s) 299, 727, 1101
AatII GACGTC 2 cut(s) 303, 390
Acc65I GGTACC 1 cut(s) 1293
AccB1I GGYRCC 5 cut(s) 470, 565, 813, 910, 1293
AccB7I CCANNNNNTGG 1 cut(s) 199
AccII CGCG 4 cut(s) 282, 351, 468, 908
AclWI GGATC 1 cut(s) 4
AcoI YGGCCR 5 cut(s) 3, 589, 603, 903, 1037
AcyI GRCGYC 8 cut(s) 243, 285, 294, 300, 387, 471, 566, 648
AfaI GTAC 3 cut(s) 755, 947, 1295
AfiI CCNNNNNNNGG 7 cut(s) 149, 150, 199, 337, 843, 968, 1013
AgeI ACCGGT 1 cut(s) 793
AgsI TTSAA 8 cut(s) 271, 457, 487, 809, 823, 958, 1045, 1072
AjnI CCWGG 3 cut(s) 198, 1006, 1075
AluBI AGCT 6 cut(s) 85, 196, 223, 418, 532, 1091
AluI AGCT 6 cut(s) 85, 196, 223, 418, 532, 1091
Alw26I GTCTC 5 cut(s) 176, 307, 367, 686, 1146
AlwI GGATC 1 cut(s) 4
AlwNI CAGNNNCTG 2 cut(s) 199, 1225
Ama87I CYCGRG 4 cut(s) 547, 914, 949, 1048
ApaI GGGCCC 1 cut(s) 548
ApeKI GCWGC 4 cut(s) 220, 516, 880, 1228
ArsI GACNNNNNNTTYG 2 cut(s) 345, 377
AsiGI ACCGGT 1 cut(s) 793
Asp718I GGTACC 1 cut(s) 1293
AspLEI GCGC 7 cut(s) 30, 473, 521, 568, 871, 922, 1187
AspS9I GGNCC 4 cut(s) 544, 545, 698, 1033
AsuHPI GGTGA 2 cut(s) 412, 808
AvaI CYCGRG 4 cut(s) 547, 914, 949, 1048
AxyI CCTNAGG 1 cut(s) 1278
BaeGI GKGCMC 3 cut(s) 548, 816, 915
BalI TGGCCA 1 cut(s) 5
BanI GGYRCC 5 cut(s) 470, 565, 813, 910, 1293
BanII GRGCYC 3 cut(s) 207, 495, 548
BbsI GAAGAC 1 cut(s) 564
BbvI GCAGC 4 cut(s) 232, 528, 892, 1240
BccI CCATC 4 cut(s) 330, 697, 1024, 1144
BceAI ACGGC 8 cut(s) 343, 397, 457, 553, 576, 848, 1024, 1278
BcgI CGANNNNNNTGC 2 cut(s) 301, 335
BciT130I CCWGG 3 cut(s) 200, 1008, 1077
BcoDI GTCTC 5 cut(s) 176, 307, 367, 686, 1146
BfaI CTAG 2 cut(s) 359, 732
BfmI CTRYAG 2 cut(s) 1226, 1266
BfoI RGCGCY 4 cut(s) 474, 522, 569, 872
BglI GCCNNNNNGGC 1 cut(s) 479
BmeT110I CYCGRG 4 cut(s) 547, 914, 949, 1048
BmgT120I GGNCC 4 cut(s) 544, 545, 698, 1033
BmsI GCATC 2 cut(s) 285, 513
BpiI GAAGAC 1 cut(s) 564
BplI GAGNNNNNCTC 2 cut(s) 194, 226
BpmI CTGGAG 1 cut(s) 221
BpuEI CTTGAG 2 cut(s) 461, 806
BsaHI GRCGYC 8 cut(s) 243, 285, 294, 300, 387, 471, 566, 648
BsaI GGTCTC 2 cut(s) 176, 686
BsaWI WCCGGW 2 cut(s) 722, 793
Bsc4I CCNNNNNNNGG 7 cut(s) 149, 150, 199, 337, 843, 968, 1013
Bse118I RCCGGY 2 cut(s) 422, 793
Bse1I ACTGG 3 cut(s) 592, 906, 1062
Bse21I CCTNAGG 1 cut(s) 1278
Bse3DI GCAATG 1 cut(s) 1221
BseBI CCWGG 3 cut(s) 200, 1008, 1077
BseGI GGATG 3 cut(s) 276, 341, 1155
BseLI CCNNNNNNNGG 7 cut(s) 149, 150, 199, 337, 843, 968, 1013
BseMI GCAATG 1 cut(s) 1221
BseMII CTCAG 2 cut(s) 831, 1292
BseNI ACTGG 3 cut(s) 592, 906, 1062
BseRI GAGGAG 1 cut(s) 250
BseSI GKGCMC 3 cut(s) 548, 816, 915
BseX3I CGGCCG 2 cut(s) 603, 1037
BseXI GCAGC 4 cut(s) 232, 528, 892, 1240
BseYI CCCAGC 1 cut(s) 192
Bsh1236I CGCG 4 cut(s) 282, 351, 468, 908
Bsh1285I CGRYCG 2 cut(s) 606, 1040
BshNI GGYRCC 5 cut(s) 470, 565, 813, 910, 1293
BshTI ACCGGT 1 cut(s) 793
BsiEI CGRYCG 2 cut(s) 606, 1040
BsiHKCI CYCGRG 4 cut(s) 547, 914, 949, 1048
BslFI GGGAC 3 cut(s) 175, 353, 1297
BslI CCNNNNNNNGG 7 cut(s) 149, 150, 199, 337, 843, 968, 1013
BsmAI GTCTC 5 cut(s) 176, 307, 367, 686, 1146
BsmBI CGTCTC 1 cut(s) 307
BsmFI GGGAC 3 cut(s) 175, 353, 1297
BsmI GAATGC 1 cut(s) 865
Bso31I GGTCTC 2 cut(s) 176, 686
BsoBI CYCGRG 4 cut(s) 547, 914, 949, 1048
Bsp120I GGGCCC 1 cut(s) 544
Bsp1286I GDGCHC 5 cut(s) 207, 495, 548, 816, 915
Bsp1407I TGTACA 1 cut(s) 753
Bsp143I GATC 1 cut(s) 9
BspCNI CTCAG 2 cut(s) 832, 1291
BspFNI CGCG 4 cut(s) 282, 351, 468, 908
BspMAI CTGCAG 1 cut(s) 1230
BspPI GGATC 1 cut(s) 4
BspQI GCTCTTC 1 cut(s) 494
BspT107I GGYRCC 5 cut(s) 470, 565, 813, 910, 1293
BspTNI GGTCTC 2 cut(s) 176, 686
BsrDI GCAATG 1 cut(s) 1221
BsrFI RCCGGY 2 cut(s) 422, 793
BsrGI TGTACA 1 cut(s) 753
BsrI ACTGG 3 cut(s) 592, 906, 1062
BssAI RCCGGY 2 cut(s) 422, 793
BssMI GATC 1 cut(s) 9
BssNI GRCGYC 8 cut(s) 243, 285, 294, 300, 387, 471, 566, 648
BssT1I CCWWGG 1 cut(s) 213
Bst2UI CCWGG 3 cut(s) 200, 1008, 1077
Bst4CI ACNGT 4 cut(s) 945, 1098, 1270, 1302
Bst6I CTCTTC 3 cut(s) 272, 458, 494
BstACI GRCGYC 8 cut(s) 243, 285, 294, 300, 387, 471, 566, 648
BstAPI GCANNNNNTGC 1 cut(s) 1225
BstAUI TGTACA 1 cut(s) 753
BstC8I GCNNGC 6 cut(s) 32, 530, 534, 632, 873, 891
BstDEI CTNAG 2 cut(s) 840, 1278
BstDSI CCRYGG 4 cut(s) 325, 466, 864, 906
BstEII GGTNACC 1 cut(s) 1016
BstF5I GGATG 3 cut(s) 276, 341, 1155
BstFNI CGCG 4 cut(s) 282, 351, 468, 908
BstH2I RGCGCY 4 cut(s) 474, 522, 569, 872
BstHHI GCGC 7 cut(s) 30, 473, 521, 568, 871, 922, 1187
BstKTI GATC 1 cut(s) 12
BstMAI GTCTC 5 cut(s) 176, 307, 367, 686, 1146
BstMBI GATC 1 cut(s) 9
BstMCI CGRYCG 2 cut(s) 606, 1040
BstNI CCWGG 3 cut(s) 200, 1008, 1077
BstNSI RCATGY 1 cut(s) 1235
BstPI GGTNACC 1 cut(s) 1016
BstSFI CTRYAG 2 cut(s) 1226, 1266
BstSLI GKGCMC 3 cut(s) 548, 816, 915
BstUI CGCG 4 cut(s) 282, 351, 468, 908
BstV1I GCAGC 4 cut(s) 232, 528, 892, 1240
BstV2I GAAGAC 1 cut(s) 564
BstX2I RGATCY 1 cut(s) 9
BstYI RGATCY 1 cut(s) 9
BstZI CGGCCG 2 cut(s) 603, 1037
Bsu36I CCTNAGG 1 cut(s) 1278
BtgI CCRYGG 4 cut(s) 325, 466, 864, 906
BtsCI GGATG 3 cut(s) 276, 341, 1155
BtsIMutI CAGTG 2 cut(s) 837, 899
Cac8I GCNNGC 6 cut(s) 32, 530, 534, 632, 873, 891
CaiI CAGNNNCTG 2 cut(s) 199, 1225
CfoI GCGC 7 cut(s) 30, 473, 521, 568, 871, 922, 1187
Cfr10I RCCGGY 2 cut(s) 422, 793
Cfr13I GGNCC 4 cut(s) 544, 545, 698, 1033
Cfr42I CCGCGG 2 cut(s) 469, 909
Cfr9I CCCGGG 4 cut(s) 547, 914, 949, 1048
CseI GACGC 5 cut(s) 251, 293, 302, 656, 895
Csp6I GTAC 3 cut(s) 754, 946, 1294
CspAI ACCGGT 1 cut(s) 793
CviAII CATG 3 cut(s) 638, 1145, 1232
CviQI GTAC 3 cut(s) 754, 946, 1294
DdeI CTNAG 2 cut(s) 840, 1278
DinI GGCGCC 2 cut(s) 472, 567
DpnI GATC 1 cut(s) 11
DpnII GATC 1 cut(s) 9
DrdI GACNNNNNNGTC 3 cut(s) 299, 727, 1101
DseDI GACNNNNNNGTC 3 cut(s) 299, 727, 1101
EaeI YGGCCR 5 cut(s) 3, 589, 603, 903, 1037
EagI CGGCCG 2 cut(s) 603, 1037
Eam1104I CTCTTC 3 cut(s) 272, 458, 494
EarI CTCTTC 3 cut(s) 272, 458, 494
EciI GGCGGA 3 cut(s) 119, 355, 885
EclXI CGGCCG 2 cut(s) 603, 1037
Eco130I CCWWGG 1 cut(s) 213
Eco147I AGGCCT 2 cut(s) 482, 1276
Eco24I GRGCYC 3 cut(s) 207, 495, 548
Eco31I GGTCTC 2 cut(s) 176, 686
Eco52I CGGCCG 2 cut(s) 603, 1037
Eco81I CCTNAGG 1 cut(s) 1278
Eco88I CYCGRG 4 cut(s) 547, 914, 949, 1048
Eco91I GGTNACC 1 cut(s) 1016
EcoO65I GGTNACC 1 cut(s) 1016
EcoRII CCWGG 3 cut(s) 198, 1006, 1075
EcoT14I CCWWGG 1 cut(s) 213
EcoT38I GRGCYC 3 cut(s) 207, 495, 548
EgeI GGCGCC 2 cut(s) 472, 567
EheI GGCGCC 2 cut(s) 472, 567
ErhI CCWWGG 1 cut(s) 213
Esp3I CGTCTC 1 cut(s) 307
FaeI CATG 3 cut(s) 641, 1148, 1235
FaqI GGGAC 3 cut(s) 175, 353, 1297
FatI CATG 3 cut(s) 637, 1144, 1231
FauI CCCGC 3 cut(s) 356, 470, 1054
FokI GGATG 3 cut(s) 263, 348, 1162
FriOI GRGCYC 3 cut(s) 207, 495, 548
FspBI CTAG 2 cut(s) 359, 732
GlaI GCGC 7 cut(s) 29, 472, 520, 567, 870, 921, 1186
GsaI CCCAGC 1 cut(s) 196
GsuI CTGGAG 1 cut(s) 221
HaeII RGCGCY 4 cut(s) 474, 522, 569, 872
HgaI GACGC 5 cut(s) 251, 293, 302, 656, 895
HhaI GCGC 7 cut(s) 30, 473, 521, 568, 871, 922, 1187
Hin1I GRCGYC 8 cut(s) 243, 285, 294, 300, 387, 471, 566, 648
Hin1II CATG 3 cut(s) 641, 1148, 1235
Hin6I GCGC 7 cut(s) 28, 471, 519, 566, 869, 920, 1185
HinP1I GCGC 7 cut(s) 28, 471, 519, 566, 869, 920, 1185
HphI GGTGA 2 cut(s) 412, 808
Hpy166II GTNNAC 3 cut(s) 325, 1055, 1247
Hpy188I TCNGA 7 cut(s) 157, 163, 169, 175, 335, 598, 941
Hpy188III TCNNGA 2 cut(s) 457, 732
Hpy8I GTNNAC 3 cut(s) 325, 1055, 1247
Hpy99I CGWCG 9 cut(s) 125, 287, 296, 302, 389, 392, 580, 583, 650
HpyAV CCTTC 7 cut(s) 379, 481, 761, 772, 793, 803, 826
HpyCH4III ACNGT 4 cut(s) 945, 1098, 1270, 1302
HpyCH4IV ACGT 3 cut(s) 300, 387, 621
HpyCH4V TGCA 6 cut(s) 773, 998, 1202, 1214, 1219, 1228
HpyF3I CTNAG 2 cut(s) 840, 1278
HpySE526I ACGT 3 cut(s) 300, 387, 621
Hsp92I GRCGYC 8 cut(s) 243, 285, 294, 300, 387, 471, 566, 648
Hsp92II CATG 3 cut(s) 641, 1148, 1235
HspAI GCGC 7 cut(s) 28, 471, 519, 566, 869, 920, 1185
KasI GGCGCC 2 cut(s) 470, 565
KpnI GGTACC 1 cut(s) 1297
KspI CCGCGG 2 cut(s) 469, 909
Kzo9I GATC 1 cut(s) 9
LguI GCTCTTC 1 cut(s) 494
LmnI GCTCC 5 cut(s) 201, 202, 217, 490, 898
Lsp1109I GCAGC 4 cut(s) 232, 528, 892, 1240
LweI GCATC 2 cut(s) 285, 513
MaeI CTAG 2 cut(s) 359, 732
MaeII ACGT 3 cut(s) 300, 387, 621
MaeIII GTNAC 1 cut(s) 1016
MalI GATC 1 cut(s) 11
MboI GATC 1 cut(s) 9
MboII GAAGA 5 cut(s) 259, 445, 511, 564, 625
MfeI CAATTG 2 cut(s) 818, 1197
MflI RGATCY 1 cut(s) 9
MhlI GDGCHC 5 cut(s) 207, 495, 548, 816, 915
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 4 cut(s) 656, 687, 818, 1197
MluNI TGGCCA 1 cut(s) 5
Mly113I GGCGCC 2 cut(s) 471, 566
MlyI GAGTC 7 cut(s) 152, 158, 164, 251, 389, 593, 1231
MmeI TCCRAC 4 cut(s) 135, 198, 276, 576
Mox20I TGGCCA 1 cut(s) 5
MscI TGGCCA 1 cut(s) 5
Msp20I TGGCCA 1 cut(s) 5
MspA1I CMGCKG 5 cut(s) 468, 532, 627, 908, 1091
MunI CAATTG 2 cut(s) 818, 1197
Mva1269I GAATGC 1 cut(s) 865
MvaI CCWGG 3 cut(s) 200, 1008, 1077
MvnI CGCG 4 cut(s) 282, 351, 468, 908
NarI GGCGCC 2 cut(s) 471, 566
NdeII GATC 1 cut(s) 9
NlaIII CATG 3 cut(s) 641, 1148, 1235
NmeAIII GCCGAG 2 cut(s) 581, 676
NspI RCATGY 1 cut(s) 1235
PceI AGGCCT 2 cut(s) 482, 1276
PciSI GCTCTTC 1 cut(s) 494
PcsI WCGNNNNNNNCGW 4 cut(s) 117, 387, 566, 627
PctI GAATGC 1 cut(s) 865
PfeI GAWTC 3 cut(s) 713, 958, 1207
PflFI GACNNNGTC 1 cut(s) 187
PflMI CCANNNNNTGG 1 cut(s) 199
PfoI TCCNGGA 1 cut(s) 198
PinAI ACCGGT 1 cut(s) 793
PleI GAGTC 7 cut(s) 152, 158, 164, 251, 389, 593, 1230
PluTI GGCGCC 2 cut(s) 474, 569
PpsI GAGTC 7 cut(s) 152, 158, 164, 251, 389, 593, 1230
Psp6I CCWGG 3 cut(s) 198, 1006, 1075
PspEI GGTNACC 1 cut(s) 1016
PspFI CCCAGC 1 cut(s) 192
PspGI CCWGG 3 cut(s) 198, 1006, 1075
PspOMI GGGCCC 1 cut(s) 544
PspPI GGNCC 4 cut(s) 544, 545, 698, 1033
PstI CTGCAG 1 cut(s) 1230
PstNI CAGNNNCTG 2 cut(s) 199, 1225
PsuI RGATCY 1 cut(s) 9
PsyI GACNNNGTC 1 cut(s) 187
PvuII CAGCTG 2 cut(s) 532, 1091
RsaI GTAC 3 cut(s) 755, 947, 1295
RsaNI GTAC 3 cut(s) 754, 946, 1294
SacII CCGCGG 2 cut(s) 469, 909
SapI GCTCTTC 1 cut(s) 494
Sau3AI GATC 1 cut(s) 9
Sau96I GGNCC 4 cut(s) 544, 545, 698, 1033
SchI GAGTC 7 cut(s) 152, 158, 164, 251, 389, 593, 1231
SduI GDGCHC 5 cut(s) 207, 495, 548, 816, 915
SfaNI GCATC 2 cut(s) 285, 513
SfcI CTRYAG 2 cut(s) 1226, 1266
SfoI GGCGCC 2 cut(s) 472, 567
Sfr303I CCGCGG 2 cut(s) 469, 909
SgrBI CCGCGG 2 cut(s) 469, 909
SmaI CCCGGG 4 cut(s) 549, 916, 951, 1050
SmlI CTYRAG 2 cut(s) 476, 785
SmoI CTYRAG 2 cut(s) 476, 785
Sse9I AATT 4 cut(s) 656, 687, 818, 1197
SseBI AGGCCT 2 cut(s) 482, 1276
SspDI GGCGCC 2 cut(s) 470, 565
SspMI CTAG 2 cut(s) 359, 732
StuI AGGCCT 2 cut(s) 482, 1276
StyI CCWWGG 1 cut(s) 213
TaaI ACNGT 4 cut(s) 945, 1098, 1270, 1302
TaiI ACGT 3 cut(s) 303, 390, 624
TaqI TCGA 5 cut(s) 60, 87, 390, 581, 711
TasI AATT 4 cut(s) 656, 687, 818, 1197
TatI WGTACW 1 cut(s) 753
TauI GCSGC 9 cut(s) 248, 290, 468, 471, 566, 591, 630, 637, 908
TfiI GAWTC 3 cut(s) 713, 958, 1207
TscAI CASTG 2 cut(s) 844, 906
TseI GCWGC 4 cut(s) 220, 516, 880, 1228
TspGWI ACGGA 2 cut(s) 194, 951
TspMI CCCGGG 4 cut(s) 547, 914, 949, 1048
TspRI CASTG 2 cut(s) 844, 906
Tth111I GACNNNGTC 1 cut(s) 187
Van91I CCANNNNNTGG 1 cut(s) 199
XbaI TCTAGA 1 cut(s) 731
XceI RCATGY 1 cut(s) 1235
XmaI CCCGGG 4 cut(s) 547, 914, 949, 1048
XspI CTAG 2 cut(s) 359, 732
ZraI GACGTC 2 cut(s) 301, 388
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.