pycom01g04960

UBP1-associated protein 2A-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
OG0001435
Physical Location & Seq
Forward (+)
4324721 .. 4326325
1605 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom01g04960.1

Sequence Viewer

Length: 1605 bp
ATGAGGATACTTTTACCCTGTATCTCTCCCGATTCCCAATCAGTTCCTGCGTTTTCACTTGGGCGCCGGCAGCAGCTCCTCAAAGAAACCCTAACCCTAACCCCCAAATCTGTCTATCCACGACGCTGCACCCCTCCTCTAATGGCGAAAAAACGAAAGCTTAGCTCCTCCGAGCCCTCCGAACCCACCAAAAAGCAACAGGTCGTAGTGGAGGAACCCAAACCCCAAAACGAACCAGCAGAGGAAGTAGTCGAAGAGGAAGAAGAAGAAGTCGAAGAAGAGGAGGAGGAGGAGGAAGATGAAGGAGCCGACGAAGACGAAGAGGAAGAGGAGGACGAAGAGGGGCCGGGCGGTGAGTATAAGGAAACCGGTAACATAACCACGACGTCCGCCTCAGCCGCTTTGGATCAGGCCGGTGCAGGTGATGACGAGGACGAGCCGATCCAGAATCTTCTAGAACCATTCACCAAGGAACAGCTTATCTCCCTGCTCCTCGAAGCTGCCGATAACCACGGCGACGTGACGGATCGGATCCGGAAGGTTGCGGATGAGGACCCAATCCACCGCAAGATCTTCGTCCACGGTCTCGGATGGGACACCAACGCCGAAACCCTAACTGGTGTGTTTAAGGAATACGGTGAGATTGAGGATTGCAAGGCTGTTTGCGATAAGGTCTCTGGTAAGTCCAAGGGTTACGGTTTCATTCTCTTCAAGACTCGTTCTGGGGCCCGAAAAGCCCTAAAGCAGCCCCAGAAGCAGATCGGTAATCGGATGACTGCATGCCAGCTGGCGGCGATTGGCCCTGGCCCGGCTCCTAACGCCGCTGCTGGACCTATGGCAGCCCCGGCGGCTCAATCCCAGTCGATGTCGGAGTACACGCAGAGGAAGATCTACGTGAGCAATGTTGGGGGGGACTTGGAGCCCCAGAAACTTCTTATGTTCTTTTCTAGGTTTGGAGAAATTGAGGAAGGGCCACTAGGGCTCGATAAGTTGACCGGGAGGCCTAAAGGGTTTTGCTTGTTTGTGTACAAGTCGGCAGAGAGTGCCAAGAGGGCTCTGGAAGAGCCGCACAAGAATTTTGAGGGCCATATTTTGCATTGCCAGAAGGCCATTGACGGTCCAAAGCCGGGCAAGTCTCAGCACCAGAACCAGCACTACCACAAGTCACATAATTCCAAGTTTCAGAGGAATGAGAATTCAGGTTATGCAGGTGGAGCTGCATCAGGAATGGGCCATTTGATGGCACCTGCGAGTGGGGGGATTGGATTTAATCAGGGGGCTGCTGCAGCCCAGGCATTTAACCCAGCTATTGGGCAGGCACTGACTGCTTTGCTTGCAACACAGGGAGCTGGCCTGGGGCTGACAAACCTTTTGGGGACTTTTGGAACAGCTCCGAATGTGAACCCAGGTGTTCCTGGTGCAGGACATGTGATGCAGGGTGGATACGGGAATCAGGCAAGTATTAGTCCTGGGATGATGGGAAACTATGGAAATCAAGGTGCAATGCAAGGTGGCTATCCTAACCCGCAGTTAGGGCAAGGTGGTTCAGGAAGGGGGCAGCATGGCGCTGGGCAATCTGGTGGCGCTCCGTACATGGGGCATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000122 GO:0001101 GO:0001837 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003730 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005667 GO:0005737 GO:0005829 GO:0005849 GO:0006139 GO:0006355 GO:0006357 GO:0006378 GO:0006379 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0007275 GO:0007568 GO:0008150 GO:0008152 GO:0008219 GO:0009058 GO:0009692 GO:0009693 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009888 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009894 GO:0009895 GO:0009987 GO:0010033 GO:0010150 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010558 GO:0010604 GO:0010605 GO:0010608 GO:0010628 GO:0010629 GO:0010817 GO:0016070 GO:0016071 GO:0017091 GO:0019219 GO:0019222 GO:0023052 GO:0030154 GO:0031123 GO:0031124 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0031329 GO:0031330 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032870 GO:0032991 GO:0033993 GO:0034641 GO:0042221 GO:0042445 GO:0042446 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043449 GO:0043450 GO:0043487 GO:0043488 GO:0043489 GO:0043631 GO:0044237 GO:0044238 GO:0044249 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0044798 GO:0045892 GO:0045893 GO:0045934 GO:0045935 GO:0046483 GO:0048255 GO:0048366 GO:0048367 GO:0048513 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048731 GO:0048762 GO:0048827 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051173 GO:0051252 GO:0051253 GO:0051254 GO:0051716 GO:0060255 GO:0060485 GO:0061013 GO:0065007 GO:0065008 GO:0070013 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0080090 GO:0090304 GO:0090305 GO:0090501 GO:0090575 GO:0090693 GO:0097159 GO:0097305 GO:0097306 GO:0099402 GO:1900673 GO:1900674 GO:1901360 GO:1901363 GO:1901576 GO:1901700 GO:1901701 GO:1902369 GO:1902373 GO:1902679 GO:1902680 GO:1903311 GO:1903312 GO:1903506 GO:1903507 GO:1903508 GO:1990904 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko03040 map03040
Pfam Domains
Protein Families
RRM_1

Protein Analysis

535

Amino Acids

56.91

Weight (kDa)

5.17

Isoelectric Point (pI)

53.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RRM_1 PF00076 191 - 256 2.4e-13 RNA recognition motif
RRM_1 PF00076 297 - 365 2.2e-09 RNA recognition motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 3 cut(s) 410, 1199, 1255
AatII GACGTC 1 cut(s) 389
Acc36I ACCTGC 3 cut(s) 410, 1199, 1255
AccB1I GGYRCC 2 cut(s) 63, 1243
AccB7I CCANNNNNTGG 2 cut(s) 1240, 1310
AccIII TCCGGA 1 cut(s) 534
AclWI GGATC 5 cut(s) 414, 436, 526, 534, 539
AcsI RAATTY 2 cut(s) 1075, 1195
AcyI GRCGYC 2 cut(s) 64, 386
AfaI GTAC 3 cut(s) 875, 1028, 1592
AfiI CCNNNNNNNGG 9 cut(s) 790, 808, 1127, 1240, 1253, 1310, 1421, 1532, 1595
AflIII ACRYGT 1 cut(s) 1426
AgeI ACCGGT 1 cut(s) 368
AgsI TTSAA 1 cut(s) 712
AjiI CACGTC 1 cut(s) 520
AjnI CCWGG 6 cut(s) 802, 1290, 1353, 1405, 1414, 1468
Alw26I GTCTC 3 cut(s) 590, 679, 1140
AlwI GGATC 5 cut(s) 414, 436, 526, 534, 539
AlwNI CAGNNNCTG 2 cut(s) 47, 1321
Aor13HI TCCGGA 1 cut(s) 534
ApaI GGGCCC 1 cut(s) 730
ApoI RAATTY 2 cut(s) 1075, 1195
ArsI GACNNNNNNTTYG 2 cut(s) 1354, 1386
AsiGI ACCGGT 1 cut(s) 368
AspLEI GCGC 3 cut(s) 66, 1568, 1586
AsuC2I CCSGG 5 cut(s) 348, 809, 845, 997, 1128
AsuHPI GGTGA 4 cut(s) 365, 434, 457, 650
AvaII GGWCC 3 cut(s) 553, 830, 1118
BaeGI GKGCMC 1 cut(s) 730
BamHI GGATCC 1 cut(s) 531
BanI GGYRCC 2 cut(s) 63, 1243
BanII GRGCYC 5 cut(s) 177, 730, 924, 984, 1057
BbsI GAAGAC 1 cut(s) 321
BbvCI CCTCAGC 1 cut(s) 394
BccI CCATC 3 cut(s) 585, 1234, 1471
BceAI ACGGC 1 cut(s) 529
BcgI CGANNNNNNTGC 2 cut(s) 556, 590
BciT130I CCWGG 6 cut(s) 804, 1292, 1355, 1407, 1416, 1470
BciVI GTATCC 1 cut(s) 1436
BcnI CCSGG 5 cut(s) 348, 809, 845, 997, 1128
BcoDI GTCTC 3 cut(s) 590, 679, 1140
BfaI CTAG 3 cut(s) 455, 948, 977
BfmI CTRYAG 1 cut(s) 1284
BfoI RGCGCY 3 cut(s) 67, 1569, 1587
BfuAI ACCTGC 3 cut(s) 410, 1199, 1255
BfuI GTATCC 1 cut(s) 1436
BglI GCCNNNNNGGC 3 cut(s) 848, 979, 1052
BglII AGATCT 2 cut(s) 570, 888
BlpI GCTNAGC 1 cut(s) 161
Bme18I GGWCC 3 cut(s) 553, 830, 1118
BmgBI CACGTC 1 cut(s) 520
BmrI ACTGGG 1 cut(s) 853
BmsI GCATC 2 cut(s) 1229, 1422
BmuI ACTGGG 1 cut(s) 853
BpiI GAAGAC 1 cut(s) 321
Bpu10I CCTNAGC 1 cut(s) 394
Bpu1102I GCTNAGC 1 cut(s) 161
BpuMI CCSGG 5 cut(s) 348, 809, 845, 997, 1128
BsaAI YACGTR 1 cut(s) 895
BsaHI GRCGYC 2 cut(s) 64, 386
BsaI GGTCTC 2 cut(s) 590, 679
BsaWI WCCGGW 2 cut(s) 368, 534
Bsc4I CCNNNNNNNGG 9 cut(s) 790, 808, 1127, 1240, 1253, 1310, 1421, 1532, 1595
Bse118I RCCGGY 3 cut(s) 66, 368, 413
Bse1I ACTGG 2 cut(s) 622, 859
Bse3DI GCAATG 3 cut(s) 907, 1096, 1509
BseAI TCCGGA 1 cut(s) 534
BseBI CCWGG 6 cut(s) 804, 1292, 1355, 1407, 1416, 1470
BseGI GGATG 4 cut(s) 553, 596, 777, 1479
BseLI CCNNNNNNNGG 9 cut(s) 790, 808, 1127, 1240, 1253, 1310, 1421, 1532, 1595
BseMI GCAATG 3 cut(s) 907, 1096, 1509
BseMII CTCAG 2 cut(s) 408, 1151
BseNI ACTGG 2 cut(s) 622, 859
BseRI GAGGAG 9 cut(s) 68, 126, 157, 296, 299, 302, 305, 344, 482
BseSI GKGCMC 1 cut(s) 730
BseYI CCCAGC 2 cut(s) 1303, 1568
BsgI GTGCAG 3 cut(s) 112, 438, 1440
BshNI GGYRCC 2 cut(s) 63, 1243
BshTI ACCGGT 1 cut(s) 368
BsiSI CCGG 9 cut(s) 67, 347, 369, 414, 535, 809, 845, 996, 1127
BslFI GGGAC 3 cut(s) 608, 926, 1390
BslI CCNNNNNNNGG 9 cut(s) 790, 808, 1127, 1240, 1253, 1310, 1421, 1532, 1595
BsmAI GTCTC 3 cut(s) 590, 679, 1140
BsmFI GGGAC 3 cut(s) 608, 926, 1390
Bso31I GGTCTC 2 cut(s) 590, 679
Bsp120I GGGCCC 1 cut(s) 726
Bsp1286I GDGCHC 5 cut(s) 177, 730, 924, 984, 1057
Bsp13I TCCGGA 1 cut(s) 534
Bsp1407I TGTACA 1 cut(s) 1026
Bsp143I GATC 7 cut(s) 406, 441, 526, 531, 570, 759, 888
Bsp1720I GCTNAGC 1 cut(s) 161
BspCNI CTCAG 2 cut(s) 407, 1150
BspEI TCCGGA 1 cut(s) 534
BspMAI CTGCAG 1 cut(s) 1288
BspMI ACCTGC 3 cut(s) 410, 1199, 1255
BspPI GGATC 5 cut(s) 414, 436, 526, 534, 539
BspQI GCTCTTC 1 cut(s) 1056
BspT107I GGYRCC 2 cut(s) 63, 1243
BspTNI GGTCTC 2 cut(s) 590, 679
BsrDI GCAATG 3 cut(s) 907, 1096, 1509
BsrFI RCCGGY 3 cut(s) 66, 368, 413
BsrGI TGTACA 1 cut(s) 1026
BsrI ACTGG 2 cut(s) 622, 859
BssAI RCCGGY 3 cut(s) 66, 368, 413
BssMI GATC 7 cut(s) 406, 441, 526, 531, 570, 759, 888
BssNI GRCGYC 2 cut(s) 64, 386
BssT1I CCWWGG 2 cut(s) 468, 687
Bst2UI CCWGG 6 cut(s) 804, 1292, 1355, 1407, 1416, 1470
Bst4CI ACNGT 4 cut(s) 584, 638, 698, 1118
Bst6I CTCTTC 7 cut(s) 249, 273, 315, 321, 333, 713, 1056
BstACI GRCGYC 2 cut(s) 64, 386
BstAPI GCANNNNNTGC 2 cut(s) 1043, 1325
BstAUI TGTACA 1 cut(s) 1026
BstBAI YACGTR 1 cut(s) 895
BstC8I GCNNGC 7 cut(s) 68, 781, 785, 789, 1317, 1335, 1351
BstDEI CTNAG 3 cut(s) 161, 394, 1137
BstDSI CCRYGG 2 cut(s) 511, 580
BstENI CCTNNNNNAGG 1 cut(s) 1419
BstF5I GGATG 4 cut(s) 553, 596, 777, 1479
BstH2I RGCGCY 3 cut(s) 67, 1569, 1587
BstHHI GCGC 3 cut(s) 66, 1568, 1586
BstKTI GATC 7 cut(s) 409, 444, 529, 534, 573, 762, 891
BstMAI GTCTC 3 cut(s) 590, 679, 1140
BstMBI GATC 7 cut(s) 406, 441, 526, 531, 570, 759, 888
BstNI CCWGG 6 cut(s) 804, 1292, 1355, 1407, 1416, 1470
BstNSI RCATGY 2 cut(s) 783, 1430
BstSFI CTRYAG 1 cut(s) 1284
BstSLI GKGCMC 1 cut(s) 730
BstV2I GAAGAC 1 cut(s) 321
BstX2I RGATCY 3 cut(s) 531, 570, 888
BstYI RGATCY 3 cut(s) 531, 570, 888
BsuI GTATCC 1 cut(s) 1436
BtgI CCRYGG 2 cut(s) 511, 580
BtrI CACGTC 1 cut(s) 520
BtsCI GGATG 4 cut(s) 553, 596, 777, 1479
BtsIMutI CAGTG 1 cut(s) 1319
BveI ACCTGC 3 cut(s) 410, 1199, 1255
Cac8I GCNNGC 7 cut(s) 68, 781, 785, 789, 1317, 1335, 1351
CaiI CAGNNNCTG 2 cut(s) 47, 1321
CfoI GCGC 3 cut(s) 66, 1568, 1586
Cfr10I RCCGGY 3 cut(s) 66, 368, 413
CseI GACGC 1 cut(s) 132
Csp6I GTAC 3 cut(s) 874, 1027, 1591
CspAI ACCGGT 1 cut(s) 368
CviAII CATG 4 cut(s) 780, 1427, 1562, 1594
CviQI GTAC 3 cut(s) 874, 1027, 1591
DdeI CTNAG 3 cut(s) 161, 394, 1137
DinI GGCGCC 1 cut(s) 65
DpnI GATC 7 cut(s) 408, 443, 528, 533, 572, 761, 890
DpnII GATC 7 cut(s) 406, 441, 526, 531, 570, 759, 888
Eam1104I CTCTTC 7 cut(s) 249, 273, 315, 321, 333, 713, 1056
EarI CTCTTC 7 cut(s) 249, 273, 315, 321, 333, 713, 1056
EciI GGCGGA 1 cut(s) 379
Eco130I CCWWGG 2 cut(s) 468, 687
Eco147I AGGCCT 1 cut(s) 1003
Eco24I GRGCYC 5 cut(s) 177, 730, 924, 984, 1057
Eco31I GGTCTC 2 cut(s) 590, 679
Eco47I GGWCC 3 cut(s) 553, 830, 1118
EcoNI CCTNNNNNAGG 1 cut(s) 1419
EcoO109I RGGNCCY 2 cut(s) 553, 726
EcoRI GAATTC 1 cut(s) 1195
EcoRII CCWGG 6 cut(s) 802, 1290, 1353, 1405, 1414, 1468
EcoT14I CCWWGG 2 cut(s) 468, 687
EcoT38I GRGCYC 5 cut(s) 177, 730, 924, 984, 1057
EgeI GGCGCC 1 cut(s) 65
EheI GGCGCC 1 cut(s) 65
ErhI CCWWGG 2 cut(s) 468, 687
FaeI CATG 4 cut(s) 783, 1430, 1565, 1597
FaqI GGGAC 3 cut(s) 608, 926, 1390
FatI CATG 4 cut(s) 779, 1426, 1561, 1593
FauI CCCGC 1 cut(s) 1533
FokI GGATG 4 cut(s) 560, 603, 784, 1486
FriOI GRGCYC 5 cut(s) 177, 730, 924, 984, 1057
FspBI CTAG 3 cut(s) 455, 948, 977
GlaI GCGC 3 cut(s) 65, 1567, 1585
GsaI CCCAGC 2 cut(s) 1307, 1572
HaeII RGCGCY 3 cut(s) 67, 1569, 1587
HapII CCGG 9 cut(s) 67, 347, 369, 414, 535, 809, 845, 996, 1127
HgaI GACGC 1 cut(s) 132
HhaI GCGC 3 cut(s) 66, 1568, 1586
Hin1I GRCGYC 2 cut(s) 64, 386
Hin1II CATG 4 cut(s) 783, 1430, 1565, 1597
Hin6I GCGC 3 cut(s) 64, 1566, 1584
HinP1I GCGC 3 cut(s) 64, 1566, 1584
HincII GTYRAC 1 cut(s) 993
HindII GTYRAC 1 cut(s) 993
HindIII AAGCTT 1 cut(s) 158
HinfI GANTC 4 cut(s) 32, 448, 715, 1450
HpaII CCGG 9 cut(s) 67, 347, 369, 414, 535, 809, 845, 996, 1127
HphI GGTGA 4 cut(s) 365, 434, 457, 650
Hpy166II GTNNAC 5 cut(s) 580, 876, 993, 1027, 1402
Hpy188I TCNGA 8 cut(s) 172, 181, 531, 590, 771, 871, 1185, 1395
Hpy188III TCNNGA 8 cut(s) 29, 445, 455, 535, 712, 1058, 1224, 1548
Hpy8I GTNNAC 5 cut(s) 580, 876, 993, 1027, 1402
Hpy99I CGWCG 4 cut(s) 126, 314, 388, 521
HpyAV CCTTC 5 cut(s) 296, 532, 962, 1099, 1545
HpyCH4III ACNGT 4 cut(s) 584, 638, 698, 1118
HpyCH4IV ACGT 3 cut(s) 386, 519, 894
HpyF3I CTNAG 3 cut(s) 161, 394, 1137
HpySE526I ACGT 3 cut(s) 386, 519, 894
Hsp92I GRCGYC 2 cut(s) 64, 386
Hsp92II CATG 4 cut(s) 783, 1430, 1565, 1597
HspAI GCGC 3 cut(s) 64, 1566, 1584
KasI GGCGCC 1 cut(s) 63
Kpn2I TCCGGA 1 cut(s) 534
KroI GCCGGC 1 cut(s) 66
KroNI GCCGGC 1 cut(s) 68
Kzo9I GATC 7 cut(s) 406, 441, 526, 531, 570, 759, 888
LguI GCTCTTC 1 cut(s) 1056
LweI GCATC 2 cut(s) 1229, 1422
MaeI CTAG 3 cut(s) 455, 948, 977
MaeII ACGT 3 cut(s) 386, 519, 894
MaeIII GTNAC 4 cut(s) 371, 520, 692, 1164
MalI GATC 7 cut(s) 408, 443, 528, 533, 572, 761, 890
MboI GATC 7 cut(s) 406, 441, 526, 531, 570, 759, 888
MflI RGATCY 3 cut(s) 531, 570, 888
MhlI GDGCHC 5 cut(s) 177, 730, 924, 984, 1057
MluCI AATT 4 cut(s) 960, 1075, 1171, 1195
Mly113I GGCGCC 1 cut(s) 64
MlyI GAGTC 1 cut(s) 709
MmeI TCCRAC 1 cut(s) 849
MroI TCCGGA 1 cut(s) 534
MroNI GCCGGC 1 cut(s) 66
MseI TTAA 3 cut(s) 627, 1269, 1299
MspA1I CMGCKG 2 cut(s) 787, 824
MspI CCGG 9 cut(s) 67, 347, 369, 414, 535, 809, 845, 996, 1127
MvaI CCWGG 6 cut(s) 804, 1292, 1355, 1407, 1416, 1470
NaeI GCCGGC 1 cut(s) 68
NarI GGCGCC 1 cut(s) 64
NciI CCSGG 5 cut(s) 348, 809, 845, 997, 1128
NdeII GATC 7 cut(s) 406, 441, 526, 531, 570, 759, 888
NgoMIV GCCGGC 1 cut(s) 66
NlaIII CATG 4 cut(s) 783, 1430, 1565, 1597
NmuCI GTSAC 2 cut(s) 520, 1164
NspI RCATGY 2 cut(s) 783, 1430
PaeI GCATGC 1 cut(s) 783
PaqCI CACCTGC 3 cut(s) 410, 1199, 1255
PceI AGGCCT 1 cut(s) 1003
PciI ACATGT 1 cut(s) 1426
PciSI GCTCTTC 1 cut(s) 1056
PcsI WCGNNNNNNNCGW 1 cut(s) 501
PdiI GCCGGC 1 cut(s) 68
PfeI GAWTC 3 cut(s) 32, 448, 1450
PflMI CCANNNNNTGG 2 cut(s) 1240, 1310
PinAI ACCGGT 1 cut(s) 368
PleI GAGTC 1 cut(s) 709
PluTI GGCGCC 1 cut(s) 67
PpsI GAGTC 1 cut(s) 709
Ppu21I YACGTR 1 cut(s) 895
PpuMI RGGWCCY 1 cut(s) 553
PscI ACATGT 1 cut(s) 1426
Psp5II RGGWCCY 1 cut(s) 553
Psp6I CCWGG 6 cut(s) 802, 1290, 1353, 1405, 1414, 1468
PspFI CCCAGC 2 cut(s) 1303, 1568
PspGI CCWGG 6 cut(s) 802, 1290, 1353, 1405, 1414, 1468
PspOMI GGGCCC 1 cut(s) 726
PspPPI RGGWCCY 1 cut(s) 553
PsrI GAACNNNNNNTAC 2 cut(s) 1139, 1171
PstI CTGCAG 1 cut(s) 1288
PstNI CAGNNNCTG 2 cut(s) 47, 1321
PsuI RGATCY 3 cut(s) 531, 570, 888
PvuII CAGCTG 1 cut(s) 787
RsaI GTAC 3 cut(s) 875, 1028, 1592
RsaNI GTAC 3 cut(s) 874, 1027, 1591
SapI GCTCTTC 1 cut(s) 1056
SaqAI TTAA 3 cut(s) 627, 1269, 1299
Sau3AI GATC 7 cut(s) 406, 441, 526, 531, 570, 759, 888
SchI GAGTC 1 cut(s) 709
SduI GDGCHC 5 cut(s) 177, 730, 924, 984, 1057
SfaNI GCATC 2 cut(s) 1229, 1422
SfcI CTRYAG 1 cut(s) 1284
SfoI GGCGCC 1 cut(s) 65
SinI GGWCC 3 cut(s) 553, 830, 1118
SphI GCATGC 1 cut(s) 783
Sse9I AATT 4 cut(s) 960, 1075, 1171, 1195
SseBI AGGCCT 1 cut(s) 1003
SspDI GGCGCC 1 cut(s) 63
SspMI CTAG 3 cut(s) 455, 948, 977
StuI AGGCCT 1 cut(s) 1003
StyI CCWWGG 2 cut(s) 468, 687
TaaI ACNGT 4 cut(s) 584, 638, 698, 1118
TaiI ACGT 3 cut(s) 389, 522, 897
TaqI TCGA 5 cut(s) 252, 273, 495, 863, 984
TasI AATT 4 cut(s) 960, 1075, 1171, 1195
TatI WGTACW 2 cut(s) 873, 1026
TauI GCSGC 5 cut(s) 401, 794, 824, 851, 1069
TfiI GAWTC 3 cut(s) 32, 448, 1450
Tru1I TTAA 3 cut(s) 627, 1269, 1299
Tru9I TTAA 3 cut(s) 627, 1269, 1299
TscAI CASTG 1 cut(s) 1326
TseFI GTSAC 2 cut(s) 520, 1164
Tsp45I GTSAC 2 cut(s) 520, 1164
TspDTI ATGAA 2 cut(s) 315, 691
TspGWI ACGGA 2 cut(s) 539, 1578
TspRI CASTG 1 cut(s) 1326
Van91I CCANNNNNTGG 2 cut(s) 1240, 1310
VpaK11BI GGWCC 3 cut(s) 553, 830, 1118
XagI CCTNNNNNAGG 1 cut(s) 1419
XapI RAATTY 2 cut(s) 1075, 1195
XbaI TCTAGA 1 cut(s) 454
XceI RCATGY 2 cut(s) 783, 1430
XcmI CCANNNNNNNNNTGG 1 cut(s) 1054
XspI CTAG 3 cut(s) 455, 948, 977
ZraI GACGTC 1 cut(s) 387
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.