Rh2CG263900

RNA recognition motif

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0001435
Physical Location & Seq
Forward (+)
28327826 .. 28329337
1512 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG263900.1

Sequence Viewer

Length: 1512 bp
ATGGCCAAGATCCAAACCACCAAGAAGCGCAGGCTCGTCAAAACCGCCGACAAAAACCTCGACAAAACCCCCAAAGCCGCAAAGCTCGAACCAAAACAAGAACAAGAACACGAACACGAACACAACGACGACCTCCGCCACAAACAGCCCCAAACGGGGTCGGACTCGGATTCGGACTCCGACCCGGAGACCCTGTCCCAGCTGCTGGAGCCCTACTCCAAGGAGCAGCTCATCTCCCTCATAACCGACGCCGCCTCCAACGACTCCTCCCTCTTCAAACGCATCCGCGACGCCGCCGACGCCGACGTCTCGCACCGCAAGATATTCGTCCACGGCCTCGGATGGGACACCACCCGCGAAACCCTAGTCTCCGCCTTCCAGCCCTACGGCGACGTTGAGGACTCCAATCTGGTAATGGACAAGCTCACCGGCAAGACCAAAGGCTACGGCTTCGTCCTCTTCAAGACCCGCCGCGGCGCCCTCAAGGCCTTGAAGGAGCCCAAGAAGAGCATCGGCAACCGCAGCGCCTCCTGCCAGCTGGCCTCGGTGGGCCCGGGGAACAATACGGGGGCGCCGTCTTCGTCGTCGAGTGGCGGCCAGTCGGACTCGGCGGGGAGGAAGATTTACGTCAGCGGCGTGCCGCATGAGGCCGAAGCCGAGAAATTGAGGGTTTTGTTTGGGAGATTTGGGGAAATTGAGACCGGGCCGATGGGGTTCGATTCGCAGACCGGAAAGTCTAGAGGTTTTGCTTTGTTCTTGTACAAGAGTGTGGAAGGTGCAAAGAAGGCACTTGAGGAACCGGTGAAGGTGTTTGAAGGGCACCAATTGAACTGCCAGAAGGCCACTGAGGGGTCAAAGAACAAGAATGCCGTGGGGCCGGCACAGCAGCAGACGCAGGCTCCGCCACTGGCCACAGTACCCGGGGCGCAGAATATGGCGTTTTTCGGACAGTACCCGGGATTGAATCCGCTGTATGGTGGATTGATGACCAATGTAGGAGGTGCATTGGTTCCTGGGTCTGGTAACCCGGCTATGATGGCCCGGCCGTTGAACCCGGGTTTACTGGCGGGGGCATTGAACCCTGGTGTGTTTCCAGCTGGACAGTATGGTCAGGTGGGTGCTGGTGTTGGTGGGTTTGGTGGTGTGTCTCATGGGATGGGGAGTTTCGGTGGGGGAGGCTCGTTGCTTGGCGCATACGGGTCAATTGCACCGCTTCCTGCAATGCAGAGTCTGCAGCATGTTTATCCAAGTTCACAGACGGGGCAGACGGCTACAGTTAGGCCTCAGGGGAGTAATGGGTACCAACCGTATATGTGGTATGATATGTTGGACTTGCATTTCTTATGTCTTAGTTTTGTGCTTATGTGTCTTCATTTTGTTTGTGCTTACTCGCCTCTAGTATTGATCATTTTTTTGGTAAAAGAATTCTTGTACTTTAATTTATATGGATTTGAATTGTCTAGTTTAGTTATATATACTTGGATTCTGACTCCTTCTGTTTCTGTTGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000375 GO:0000377 GO:0000398 GO:0003674 GO:0003676 GO:0003677 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006139 GO:0006351 GO:0006355 GO:0006366 GO:0006396 GO:0006397 GO:0006401 GO:0006417 GO:0006725 GO:0006807 GO:0007623 GO:0008150 GO:0008152 GO:0008380 GO:0009056 GO:0009057 GO:0009058 GO:0009059 GO:0009299 GO:0009889 GO:0009891 GO:0009893 GO:0009894 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010608 GO:0010628 GO:0010638 GO:0016070 GO:0016071 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0019439 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031329 GO:0031974 GO:0031981 GO:0032204 GO:0032206 GO:0032268 GO:0032270 GO:0032501 GO:0032774 GO:0032991 GO:0033043 GO:0033044 GO:0034248 GO:0034250 GO:0034641 GO:0034645 GO:0034654 GO:0034655 GO:0042162 GO:0042752 GO:0042789 GO:0043085 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043487 GO:0043488 GO:0043565 GO:0044093 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044260 GO:0044265 GO:0044270 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045727 GO:0045893 GO:0045935 GO:0046483 GO:0046700 GO:0048511 GO:0048518 GO:0048522 GO:0050789 GO:0050790 GO:0050794 GO:0051052 GO:0051054 GO:0051128 GO:0051130 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0051252 GO:0051254 GO:0051338 GO:0051347 GO:0051972 GO:0051973 GO:0060255 GO:0061013 GO:0065007 GO:0065008 GO:0065009 GO:0070013 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0097167 GO:0097659 GO:1901360 GO:1901361 GO:1901362 GO:1901363 GO:1901575 GO:1901576 GO:1902680 GO:1903311 GO:1903506 GO:1903508 GO:1904353 GO:1904355 GO:1905661 GO:1905663 GO:1990904 GO:2000112 GO:2000278 GO:2000573 GO:2001141 GO:2001252
KEGG Pathways
Metabolic & Signaling
ko03040 map03040
Pfam Domains
Protein Families
RRM_1

Protein Analysis

503

Amino Acids

53.91

Weight (kDa)

8.56

Isoelectric Point (pI)

37.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RRM_1 PF00076 108 - 174 2.6e-15 RNA recognition motif
RRM_1 PF00076 208 - 276 7e-09 RNA recognition motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 3 cut(s) 305, 733, 1107
AatII GACGTC 1 cut(s) 309
Acc65I GGTACC 1 cut(s) 1299
AccB1I GGYRCC 4 cut(s) 476, 571, 819, 1299
AccB7I CCANNNNNTGG 1 cut(s) 205
AccII CGCG 3 cut(s) 288, 357, 474
AclWI GGATC 1 cut(s) 4
AcoI YGGCCR 4 cut(s) 3, 595, 909, 1043
AcsI RAATTY 1 cut(s) 1424
AcyI GRCGYC 6 cut(s) 249, 291, 300, 306, 477, 572
AfaI GTAC 5 cut(s) 761, 918, 953, 1301, 1433
AfiI CCNNNNNNNGG 7 cut(s) 155, 156, 205, 343, 849, 974, 1019
AgeI ACCGGT 1 cut(s) 799
AgsI TTSAA 9 cut(s) 277, 463, 493, 815, 829, 964, 1051, 1078, 1454
AjnI CCWGG 2 cut(s) 1012, 1081
AluBI AGCT 6 cut(s) 85, 202, 229, 424, 538, 1097
AluI AGCT 6 cut(s) 85, 202, 229, 424, 538, 1097
Alw26I GTCTC 5 cut(s) 182, 313, 373, 692, 1152
AlwI GGATC 1 cut(s) 4
AlwNI CAGNNNCTG 2 cut(s) 205, 1231
Ama87I CYCGRG 4 cut(s) 553, 920, 955, 1054
ApaI GGGCCC 1 cut(s) 554
ApeKI GCWGC 5 cut(s) 202, 226, 522, 886, 1234
ApoI RAATTY 1 cut(s) 1424
ArsI GACNNNNNNTTYG 2 cut(s) 351, 383
AsiGI ACCGGT 1 cut(s) 799
Asp718I GGTACC 1 cut(s) 1299
AspLEI GCGC 6 cut(s) 30, 479, 527, 574, 928, 1193
AspS9I GGNCC 5 cut(s) 550, 551, 704, 875, 1039
AsuHPI GGTGA 2 cut(s) 418, 814
AvaI CYCGRG 4 cut(s) 553, 920, 955, 1054
AxyI CCTNAGG 1 cut(s) 1284
BaeGI GKGCMC 2 cut(s) 554, 822
BalI TGGCCA 2 cut(s) 5, 911
BanI GGYRCC 4 cut(s) 476, 571, 819, 1299
BanII GRGCYC 3 cut(s) 213, 501, 554
BbsI GAAGAC 2 cut(s) 570, 1361
BbvI GCAGC 5 cut(s) 189, 238, 534, 898, 1246
BccI CCATC 4 cut(s) 336, 703, 1030, 1150
BceAI ACGGC 7 cut(s) 349, 403, 463, 559, 854, 1030, 1284
BcgI CGANNNNNNTGC 2 cut(s) 307, 341
BciT130I CCWGG 2 cut(s) 1014, 1083
BclI TGATCA 1 cut(s) 1404
BcoDI GTCTC 5 cut(s) 182, 313, 373, 692, 1152
BfaI CTAG 4 cut(s) 365, 738, 1397, 1461
BfmI CTRYAG 2 cut(s) 1232, 1272
BfoI RGCGCY 3 cut(s) 480, 528, 575
BglI GCCNNNNNGGC 1 cut(s) 485
BmeT110I CYCGRG 4 cut(s) 553, 920, 955, 1054
BmgT120I GGNCC 5 cut(s) 550, 551, 704, 875, 1039
BmsI GCATC 2 cut(s) 291, 519
BpiI GAAGAC 2 cut(s) 570, 1361
BplI GAGNNNNNCTC 2 cut(s) 200, 232
BpmI CTGGAG 1 cut(s) 227
BpuEI CTTGAG 2 cut(s) 467, 812
BsaHI GRCGYC 6 cut(s) 249, 291, 300, 306, 477, 572
BsaI GGTCTC 2 cut(s) 182, 692
BsaWI WCCGGW 2 cut(s) 728, 799
Bsc4I CCNNNNNNNGG 7 cut(s) 155, 156, 205, 343, 849, 974, 1019
Bse118I RCCGGY 3 cut(s) 428, 799, 877
Bse1I ACTGG 3 cut(s) 598, 912, 1068
Bse21I CCTNAGG 1 cut(s) 1284
Bse3DI GCAATG 1 cut(s) 1227
BseBI CCWGG 2 cut(s) 1014, 1083
BseGI GGATG 3 cut(s) 282, 347, 1161
BseLI CCNNNNNNNGG 7 cut(s) 155, 156, 205, 343, 849, 974, 1019
BseMI GCAATG 1 cut(s) 1227
BseMII CTCAG 2 cut(s) 837, 1298
BseNI ACTGG 3 cut(s) 598, 912, 1068
BseRI GAGGAG 1 cut(s) 256
BseSI GKGCMC 2 cut(s) 554, 822
BseX3I CGGCCG 1 cut(s) 1043
BseXI GCAGC 5 cut(s) 189, 238, 534, 898, 1246
BseYI CCCAGC 1 cut(s) 198
Bsh1236I CGCG 3 cut(s) 288, 357, 474
Bsh1285I CGRYCG 1 cut(s) 1046
BshNI GGYRCC 4 cut(s) 476, 571, 819, 1299
BshTI ACCGGT 1 cut(s) 799
BsiEI CGRYCG 1 cut(s) 1046
BsiHKCI CYCGRG 4 cut(s) 553, 920, 955, 1054
BslFI GGGAC 2 cut(s) 181, 359
BslI CCNNNNNNNGG 7 cut(s) 155, 156, 205, 343, 849, 974, 1019
BsmAI GTCTC 5 cut(s) 182, 313, 373, 692, 1152
BsmBI CGTCTC 1 cut(s) 313
BsmFI GGGAC 2 cut(s) 181, 359
BsmI GAATGC 1 cut(s) 871
Bso31I GGTCTC 2 cut(s) 182, 692
BsoBI CYCGRG 4 cut(s) 553, 920, 955, 1054
Bsp120I GGGCCC 1 cut(s) 550
Bsp1286I GDGCHC 4 cut(s) 213, 501, 554, 822
Bsp1407I TGTACA 1 cut(s) 759
Bsp143I GATC 2 cut(s) 9, 1404
BspCNI CTCAG 2 cut(s) 838, 1297
BspFNI CGCG 3 cut(s) 288, 357, 474
BspMAI CTGCAG 1 cut(s) 1236
BspPI GGATC 1 cut(s) 4
BspQI GCTCTTC 1 cut(s) 500
BspT107I GGYRCC 4 cut(s) 476, 571, 819, 1299
BspTNI GGTCTC 2 cut(s) 182, 692
BsrDI GCAATG 1 cut(s) 1227
BsrFI RCCGGY 3 cut(s) 428, 799, 877
BsrGI TGTACA 1 cut(s) 759
BsrI ACTGG 3 cut(s) 598, 912, 1068
BssAI RCCGGY 3 cut(s) 428, 799, 877
BssMI GATC 2 cut(s) 9, 1404
BssNI GRCGYC 6 cut(s) 249, 291, 300, 306, 477, 572
BssT1I CCWWGG 1 cut(s) 219
Bst2UI CCWGG 2 cut(s) 1014, 1083
Bst4CI ACNGT 5 cut(s) 916, 951, 1104, 1276, 1308
Bst6I CTCTTC 3 cut(s) 278, 464, 500
BstACI GRCGYC 6 cut(s) 249, 291, 300, 306, 477, 572
BstAPI GCANNNNNTGC 1 cut(s) 1231
BstAUI TGTACA 1 cut(s) 759
BstC8I GCNNGC 6 cut(s) 32, 536, 540, 638, 879, 897
BstDEI CTNAG 3 cut(s) 846, 1284, 1349
BstDSI CCRYGG 3 cut(s) 331, 472, 870
BstEII GGTNACC 1 cut(s) 1022
BstF5I GGATG 3 cut(s) 282, 347, 1161
BstFNI CGCG 3 cut(s) 288, 357, 474
BstH2I RGCGCY 3 cut(s) 480, 528, 575
BstHHI GCGC 6 cut(s) 30, 479, 527, 574, 928, 1193
BstKTI GATC 2 cut(s) 12, 1407
BstMAI GTCTC 5 cut(s) 182, 313, 373, 692, 1152
BstMBI GATC 2 cut(s) 9, 1404
BstMCI CGRYCG 1 cut(s) 1046
BstNI CCWGG 2 cut(s) 1014, 1083
BstNSI RCATGY 1 cut(s) 1241
BstPI GGTNACC 1 cut(s) 1022
BstSFI CTRYAG 2 cut(s) 1232, 1272
BstSLI GKGCMC 2 cut(s) 554, 822
BstUI CGCG 3 cut(s) 288, 357, 474
BstV1I GCAGC 5 cut(s) 189, 238, 534, 898, 1246
BstV2I GAAGAC 2 cut(s) 570, 1361
BstX2I RGATCY 1 cut(s) 9
BstYI RGATCY 1 cut(s) 9
BstZI CGGCCG 1 cut(s) 1043
Bsu36I CCTNAGG 1 cut(s) 1284
BtgI CCRYGG 3 cut(s) 331, 472, 870
BtsCI GGATG 3 cut(s) 282, 347, 1161
BtsIMutI CAGTG 2 cut(s) 843, 905
Cac8I GCNNGC 6 cut(s) 32, 536, 540, 638, 879, 897
CaiI CAGNNNCTG 2 cut(s) 205, 1231
CfoI GCGC 6 cut(s) 30, 479, 527, 574, 928, 1193
Cfr10I RCCGGY 3 cut(s) 428, 799, 877
Cfr13I GGNCC 5 cut(s) 550, 551, 704, 875, 1039
Cfr42I CCGCGG 1 cut(s) 475
Cfr9I CCCGGG 4 cut(s) 553, 920, 955, 1054
CseI GACGC 4 cut(s) 257, 299, 308, 901
Csp6I GTAC 5 cut(s) 760, 917, 952, 1300, 1432
CspAI ACCGGT 1 cut(s) 799
CviAII CATG 3 cut(s) 644, 1151, 1238
CviQI GTAC 5 cut(s) 760, 917, 952, 1300, 1432
DdeI CTNAG 3 cut(s) 846, 1284, 1349
DinI GGCGCC 2 cut(s) 478, 573
DpnI GATC 2 cut(s) 11, 1406
DpnII GATC 2 cut(s) 9, 1404
DrdI GACNNNNNNGTC 3 cut(s) 305, 733, 1107
DseDI GACNNNNNNGTC 3 cut(s) 305, 733, 1107
EaeI YGGCCR 4 cut(s) 3, 595, 909, 1043
EagI CGGCCG 1 cut(s) 1043
Eam1104I CTCTTC 3 cut(s) 278, 464, 500
EarI CTCTTC 3 cut(s) 278, 464, 500
EciI GGCGGA 3 cut(s) 125, 361, 891
EclXI CGGCCG 1 cut(s) 1043
Eco130I CCWWGG 1 cut(s) 219
Eco147I AGGCCT 2 cut(s) 488, 1282
Eco24I GRGCYC 3 cut(s) 213, 501, 554
Eco31I GGTCTC 2 cut(s) 182, 692
Eco52I CGGCCG 1 cut(s) 1043
Eco81I CCTNAGG 1 cut(s) 1284
Eco88I CYCGRG 4 cut(s) 553, 920, 955, 1054
Eco91I GGTNACC 1 cut(s) 1022
EcoO65I GGTNACC 1 cut(s) 1022
EcoRI GAATTC 1 cut(s) 1424
EcoRII CCWGG 2 cut(s) 1012, 1081
EcoT14I CCWWGG 1 cut(s) 219
EcoT38I GRGCYC 3 cut(s) 213, 501, 554
EgeI GGCGCC 2 cut(s) 478, 573
EheI GGCGCC 2 cut(s) 478, 573
ErhI CCWWGG 1 cut(s) 219
Esp3I CGTCTC 1 cut(s) 313
FaeI CATG 3 cut(s) 647, 1154, 1241
FaqI GGGAC 2 cut(s) 181, 359
FatI CATG 3 cut(s) 643, 1150, 1237
FauI CCCGC 4 cut(s) 362, 476, 604, 1060
FbaI TGATCA 1 cut(s) 1404
FokI GGATG 3 cut(s) 269, 354, 1168
FriOI GRGCYC 3 cut(s) 213, 501, 554
FspBI CTAG 4 cut(s) 365, 738, 1397, 1461
GlaI GCGC 6 cut(s) 29, 478, 526, 573, 927, 1192
GsaI CCCAGC 1 cut(s) 202
GsuI CTGGAG 1 cut(s) 227
HaeII RGCGCY 3 cut(s) 480, 528, 575
HgaI GACGC 4 cut(s) 257, 299, 308, 901
HhaI GCGC 6 cut(s) 30, 479, 527, 574, 928, 1193
Hin1I GRCGYC 6 cut(s) 249, 291, 300, 306, 477, 572
Hin1II CATG 3 cut(s) 647, 1154, 1241
Hin6I GCGC 6 cut(s) 28, 477, 525, 572, 926, 1191
HinP1I GCGC 6 cut(s) 28, 477, 525, 572, 926, 1191
HphI GGTGA 2 cut(s) 418, 814
Hpy166II GTNNAC 3 cut(s) 331, 1061, 1253
Hpy188I TCNGA 8 cut(s) 163, 169, 175, 181, 341, 604, 947, 1488
Hpy188III TCNNGA 2 cut(s) 463, 738
Hpy8I GTNNAC 3 cut(s) 331, 1061, 1253
Hpy99I CGWCG 8 cut(s) 131, 251, 293, 302, 308, 395, 586, 589
HpyAV CCTTC 8 cut(s) 385, 487, 767, 778, 799, 809, 832, 1503
HpyCH4III ACNGT 5 cut(s) 916, 951, 1104, 1276, 1308
HpyCH4IV ACGT 3 cut(s) 306, 393, 627
HpyCH4V TGCA 7 cut(s) 779, 1004, 1208, 1220, 1225, 1234, 1336
HpyF3I CTNAG 3 cut(s) 846, 1284, 1349
HpySE526I ACGT 3 cut(s) 306, 393, 627
Hsp92I GRCGYC 6 cut(s) 249, 291, 300, 306, 477, 572
Hsp92II CATG 3 cut(s) 647, 1154, 1241
HspAI GCGC 6 cut(s) 28, 477, 525, 572, 926, 1191
KasI GGCGCC 2 cut(s) 476, 571
KpnI GGTACC 1 cut(s) 1303
KroI GCCGGC 1 cut(s) 877
KroNI GCCGGC 1 cut(s) 879
Ksp22I TGATCA 1 cut(s) 1404
KspI CCGCGG 1 cut(s) 475
Kzo9I GATC 2 cut(s) 9, 1404
LguI GCTCTTC 1 cut(s) 500
LmnI GCTCC 4 cut(s) 208, 223, 496, 904
Lsp1109I GCAGC 5 cut(s) 189, 238, 534, 898, 1246
LweI GCATC 2 cut(s) 291, 519
MaeI CTAG 4 cut(s) 365, 738, 1397, 1461
MaeII ACGT 3 cut(s) 306, 393, 627
MaeIII GTNAC 1 cut(s) 1022
MalI GATC 2 cut(s) 11, 1406
MboI GATC 2 cut(s) 9, 1404
MboII GAAGA 6 cut(s) 265, 451, 517, 570, 631, 1361
MfeI CAATTG 2 cut(s) 824, 1203
MflI RGATCY 1 cut(s) 9
MhlI GDGCHC 4 cut(s) 213, 501, 554, 822
MlsI TGGCCA 2 cut(s) 5, 911
MluCI AATT 7 cut(s) 662, 693, 824, 1203, 1424, 1438, 1454
MluNI TGGCCA 2 cut(s) 5, 911
Mly113I GGCGCC 2 cut(s) 477, 572
MlyI GAGTC 7 cut(s) 158, 170, 257, 395, 599, 1237, 1483
MmeI TCCRAC 5 cut(s) 141, 204, 282, 582, 1308
Mox20I TGGCCA 2 cut(s) 5, 911
MroNI GCCGGC 1 cut(s) 877
MscI TGGCCA 2 cut(s) 5, 911
MseI TTAA 1 cut(s) 1437
Msp20I TGGCCA 2 cut(s) 5, 911
MspA1I CMGCKG 6 cut(s) 202, 474, 538, 633, 970, 1097
MunI CAATTG 2 cut(s) 824, 1203
Mva1269I GAATGC 1 cut(s) 871
MvaI CCWGG 2 cut(s) 1014, 1083
MvnI CGCG 3 cut(s) 288, 357, 474
NaeI GCCGGC 1 cut(s) 879
NarI GGCGCC 2 cut(s) 477, 572
NdeII GATC 2 cut(s) 9, 1404
NgoMIV GCCGGC 1 cut(s) 877
NlaIII CATG 3 cut(s) 647, 1154, 1241
NmeAIII GCCGAG 2 cut(s) 587, 682
NspI RCATGY 1 cut(s) 1241
PceI AGGCCT 2 cut(s) 488, 1282
PciSI GCTCTTC 1 cut(s) 500
PcsI WCGNNNNNNNCGW 3 cut(s) 123, 572, 633
PctI GAATGC 1 cut(s) 871
PdiI GCCGGC 1 cut(s) 879
PfeI GAWTC 4 cut(s) 170, 719, 964, 1483
PflFI GACNNNGTC 1 cut(s) 193
PflMI CCANNNNNTGG 1 cut(s) 205
PinAI ACCGGT 1 cut(s) 799
PleI GAGTC 7 cut(s) 158, 170, 257, 395, 599, 1236, 1483
PluTI GGCGCC 2 cut(s) 480, 575
PpsI GAGTC 7 cut(s) 158, 170, 257, 395, 599, 1236, 1483
Psp6I CCWGG 2 cut(s) 1012, 1081
PspEI GGTNACC 1 cut(s) 1022
PspFI CCCAGC 1 cut(s) 198
PspGI CCWGG 2 cut(s) 1012, 1081
PspOMI GGGCCC 1 cut(s) 550
PspPI GGNCC 5 cut(s) 550, 551, 704, 875, 1039
PstI CTGCAG 1 cut(s) 1236
PstNI CAGNNNCTG 2 cut(s) 205, 1231
PsuI RGATCY 1 cut(s) 9
PsyI GACNNNGTC 1 cut(s) 193
PvuII CAGCTG 3 cut(s) 202, 538, 1097
RsaI GTAC 5 cut(s) 761, 918, 953, 1301, 1433
RsaNI GTAC 5 cut(s) 760, 917, 952, 1300, 1432
SacII CCGCGG 1 cut(s) 475
SapI GCTCTTC 1 cut(s) 500
SaqAI TTAA 1 cut(s) 1437
Sau3AI GATC 2 cut(s) 9, 1404
Sau96I GGNCC 5 cut(s) 550, 551, 704, 875, 1039
SchI GAGTC 7 cut(s) 158, 170, 257, 395, 599, 1237, 1483
SduI GDGCHC 4 cut(s) 213, 501, 554, 822
SfaNI GCATC 2 cut(s) 291, 519
SfcI CTRYAG 2 cut(s) 1232, 1272
SfoI GGCGCC 2 cut(s) 478, 573
Sfr303I CCGCGG 1 cut(s) 475
SgrBI CCGCGG 1 cut(s) 475
SmaI CCCGGG 4 cut(s) 555, 922, 957, 1056
SmlI CTYRAG 2 cut(s) 482, 791
SmoI CTYRAG 2 cut(s) 482, 791
Sse9I AATT 7 cut(s) 662, 693, 824, 1203, 1424, 1438, 1454
SseBI AGGCCT 2 cut(s) 488, 1282
SspDI GGCGCC 2 cut(s) 476, 571
SspMI CTAG 4 cut(s) 365, 738, 1397, 1461
StuI AGGCCT 2 cut(s) 488, 1282
StyI CCWWGG 1 cut(s) 219
TaaI ACNGT 5 cut(s) 916, 951, 1104, 1276, 1308
TaiI ACGT 3 cut(s) 309, 396, 630
TaqI TCGA 4 cut(s) 60, 87, 587, 717
TasI AATT 7 cut(s) 662, 693, 824, 1203, 1424, 1438, 1454
TatI WGTACW 2 cut(s) 759, 1431
TauI GCSGC 8 cut(s) 80, 254, 296, 474, 477, 597, 636, 643
TfiI GAWTC 4 cut(s) 170, 719, 964, 1483
Tru1I TTAA 1 cut(s) 1437
Tru9I TTAA 1 cut(s) 1437
TscAI CASTG 2 cut(s) 850, 912
TseI GCWGC 5 cut(s) 202, 226, 522, 886, 1234
TspDTI ATGAA 1 cut(s) 1361
TspMI CCCGGG 4 cut(s) 553, 920, 955, 1054
TspRI CASTG 2 cut(s) 850, 912
Tth111I GACNNNGTC 1 cut(s) 193
Van91I CCANNNNNTGG 1 cut(s) 205
XapI RAATTY 1 cut(s) 1424
XbaI TCTAGA 1 cut(s) 737
XceI RCATGY 1 cut(s) 1241
XcmI CCANNNNNNNNNTGG 1 cut(s) 412
XmaI CCCGGG 4 cut(s) 553, 920, 955, 1054
XspI CTAG 4 cut(s) 365, 738, 1397, 1461
ZraI GACGTC 1 cut(s) 307
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.