FvH4_1g22591

UBP1-associated protein 2A-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0001435
Physical Location & Seq
Forward (+)
14547302 .. 14551700
4399 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g22591.t1

Sequence Viewer

Length: 1446 bp
ATGGCCAGAAAGCGAAAGCTCGATTCCAACTCCGCCGAGGCCTCCGAGCCGGCCAAGAAGCAGCAGCAGCCGACGGAGCCCGTCGTCGAGGAGCCCAAGCCCCAAAACGAGCCTCCACCGGAGGAGGTAGAAGAAGAGGTCGACGAGGAGGAAGAAGAGGTTGAGGAGGAGGAGGAGGAGTACGAAGAAGAAGAGGAGGTTGAGGAGGAAGAGACCGGCGTCGAGTACAAGACGGAGAATGTAACGACGACGACGACGTCGGCGGATCCGAGTCAGGCGAACGTGGAGAACGGCGGCGAGGATGACGAGGACGAGCCGATTCAGGATCTTCTGGAGCCGTTTAGTAAGGATCAGCTGGTGAGTTTGCTGAAGGAGGCGGCGGAGAGCCACCGTGACGTGTCGGATCGGATCCGGAAAGTTGCGGATGAGGATCCGATCCACCGGAAGATCTTCGTCCACGGGCTTGGGTGGGACACCACAGCCGAAACCCTAACCAGCGTGTTCACCGAGTACGGTGAGATTGAGGATTGCAAGGCTGTGTGTGACAAGGTCTCTGGAAAATCCAAGGGTTATGGATTCATTCTCTTCAAGACTCGCTCCGGAGCTCGGAGAGCTTTGAAGCAGCCGCAGAAGAAGATAGGGAATCGAATGACTGCTTGCCAATTGGCCTCGTTGGGCCCTGCGGCGACGCCGACTGGGCCTGGGCCTGCTGCGGTGGCGGCCCAGTCCCAGCCGGTTTCGGAGTACACGCAGAGGAAGATTTATGTGAGCAATGTGGGAGCGGATTTGGATCCTCAGAAGCTGCTTGTGTTCTTTTCGAGGTTTGGGGAGATTGAAGAAGGGCCTTTGGGGCTGGATAAGGCGACGGGGAGGCCGAAGGGGTTTTGTTTGTTTGTGTATAAGTCGCCAGAGAGTGCAAAGAGGGCTTTGGAGGAGCCGCATAAGAATTTTGATGGTCACATTTTGCACTGCCAGAAGGCTATTGATGGTCCGAAGCCGGTCAAGTCTCATCACGGGAACCAGCACCACCACAATAGGAATAAGAATTCCGGTGGTTTTGGTGGCGGAGCACCAGCTGGGCCTGGCCATATGATGGCACCAGGTGGTGCTGCTGGAATTGGGTTTAACCAGGGGGCTGCATCAACACAGGCGTTGAACCCGGCGCTTGGTCAGGCTCTAGCTTTGCTTGCTACACAGGGAGCTGGTCTGAATATATTTGGGACTTTGGGAGCTCAAGGTGTGAACCCTGGTGTGCCTGGTGGAGCACATGGAATACAAAGTGCGTATGGTGGTCAGCCAAGTATCAGTCCTGGAATGATGGGAACCTATGGAAATCAAGGGGCATTGCCGGGAGGCTACCCCAACCCGCAGTTGGGCCAAGGTGGATCAGGAAGAGGGCCACATGGTCTTGGGCAATACGGTGGTGCTCCTTACACGGGGCACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000122 GO:0001101 GO:0001837 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003730 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005667 GO:0005737 GO:0005829 GO:0005849 GO:0006139 GO:0006355 GO:0006357 GO:0006378 GO:0006379 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0007275 GO:0007568 GO:0008150 GO:0008152 GO:0008219 GO:0009058 GO:0009692 GO:0009693 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009888 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009894 GO:0009895 GO:0009987 GO:0010033 GO:0010150 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010558 GO:0010604 GO:0010605 GO:0010608 GO:0010628 GO:0010629 GO:0010817 GO:0016070 GO:0016071 GO:0017091 GO:0019219 GO:0019222 GO:0023052 GO:0030154 GO:0031123 GO:0031124 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0031329 GO:0031330 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032870 GO:0032991 GO:0033993 GO:0034641 GO:0042221 GO:0042445 GO:0042446 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043449 GO:0043450 GO:0043487 GO:0043488 GO:0043489 GO:0043631 GO:0044237 GO:0044238 GO:0044249 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0044798 GO:0045892 GO:0045893 GO:0045934 GO:0045935 GO:0046483 GO:0048255 GO:0048366 GO:0048367 GO:0048513 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048731 GO:0048762 GO:0048827 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051173 GO:0051252 GO:0051253 GO:0051254 GO:0051716 GO:0060255 GO:0060485 GO:0061013 GO:0065007 GO:0065008 GO:0070013 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0080090 GO:0090304 GO:0090305 GO:0090501 GO:0090575 GO:0090693 GO:0097159 GO:0097305 GO:0097306 GO:0099402 GO:1900673 GO:1900674 GO:1901360 GO:1901363 GO:1901576 GO:1901700 GO:1901701 GO:1902369 GO:1902373 GO:1902679 GO:1902680 GO:1903311 GO:1903312 GO:1903506 GO:1903507 GO:1903508 GO:1990904 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko03040 map03040
Pfam Domains
Protein Families
RRM_1

Protein Analysis

482

Amino Acids

51.09

Weight (kDa)

5.0

Isoelectric Point (pI)

52.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RRM_1 PF00076 150 - 216 1.5e-13 RNA recognition motif
RRM_1 PF00076 254 - 322 4.1e-10 RNA recognition motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 256
AatII GACGTC 1 cut(s) 260
AccB1I GGYRCC 1 cut(s) 1096
AccB7I CCANNNNNTGG 1 cut(s) 1093
AccBSI CCGCTC 1 cut(s) 782
AccI GTMKAC 1 cut(s) 141
AccIII TCCGGA 2 cut(s) 411, 599
AcoI YGGCCR 3 cut(s) 3, 51, 1084
AcsI RAATTY 2 cut(s) 946, 1045
AcuI CTGAAG 1 cut(s) 389
AcyI GRCGYC 3 cut(s) 219, 257, 689
AdeI CACNNNGTG 1 cut(s) 1103
AfaI GTAC 4 cut(s) 182, 227, 512, 746
AfiI CCNNNNNNNGG 6 cut(s) 606, 1093, 1166, 1372, 1373, 1436
AflIII ACRYGT 1 cut(s) 396
AgsI TTSAA 4 cut(s) 589, 619, 836, 1156
AjiI CACGTC 1 cut(s) 397
AjnI CCWGG 7 cut(s) 700, 1081, 1099, 1128, 1246, 1255, 1309
AluBI AGCT 9 cut(s) 19, 355, 605, 614, 802, 1076, 1181, 1202, 1232
AluI AGCT 9 cut(s) 19, 355, 605, 614, 802, 1076, 1181, 1202, 1232
Alw21I GWGCWC 5 cut(s) 607, 1072, 1234, 1267, 1429
Alw26I GTCTC 3 cut(s) 206, 556, 1011
AlwNI CAGNNNCTG 1 cut(s) 802
Aor13HI TCCGGA 2 cut(s) 411, 599
ApaI GGGCCC 1 cut(s) 680
ApeKI GCWGC 8 cut(s) 61, 64, 67, 622, 710, 802, 1109, 1136
ApoI RAATTY 2 cut(s) 946, 1045
Asp700I GAANNNNTTC 1 cut(s) 449
AspLEI GCGC 1 cut(s) 1165
AsuC2I CCSGG 2 cut(s) 1160, 1350
AsuHPI GGTGA 3 cut(s) 370, 496, 527
AvaII GGWCC 1 cut(s) 989
BaeGI GKGCMC 2 cut(s) 680, 1443
BalI TGGCCA 2 cut(s) 5, 1086
BamHI GGATCC 4 cut(s) 265, 408, 430, 790
BanI GGYRCC 1 cut(s) 1096
BanII GRGCYC 5 cut(s) 81, 96, 607, 680, 1234
Bbv12I GWGCWC 5 cut(s) 607, 1072, 1234, 1267, 1429
BbvI GCAGC 8 cut(s) 73, 76, 79, 634, 697, 789, 1096, 1123
BccI CCATC 4 cut(s) 947, 980, 1087, 1312
BceAI ACGGC 2 cut(s) 307, 322
BciT130I CCWGG 7 cut(s) 702, 1083, 1101, 1130, 1248, 1257, 1311
BcnI CCSGG 2 cut(s) 1160, 1350
BcoDI GTCTC 3 cut(s) 206, 556, 1011
BfaI CTAG 2 cut(s) 1178, 1444
BfoI RGCGCY 1 cut(s) 1166
BglI GCCNNNNNGGC 2 cut(s) 697, 850
BglII AGATCT 1 cut(s) 447
Bme1390I CCNGG 9 cut(s) 702, 1083, 1101, 1130, 1160, 1248, 1257, 1311, 1350
Bme18I GGWCC 1 cut(s) 989
BmgBI CACGTC 1 cut(s) 397
BmrFI CCNGG 9 cut(s) 702, 1083, 1101, 1130, 1160, 1248, 1257, 1311, 1350
BmrI ACTGGG 2 cut(s) 705, 718
BmsI GCATC 1 cut(s) 1148
BmuI ACTGGG 2 cut(s) 705, 718
BoxI GACNNNNGTC 1 cut(s) 218
BpmI CTGGAG 1 cut(s) 353
BpuEI CTTGAG 1 cut(s) 1218
BpuMI CCSGG 2 cut(s) 1160, 1350
BsaBI GATNNNNATC 2 cut(s) 429, 789
BsaHI GRCGYC 3 cut(s) 219, 257, 689
BsaI GGTCTC 2 cut(s) 206, 556
BsaJI CCNNGG 7 cut(s) 36, 457, 564, 701, 1129, 1246, 1378
BsaWI WCCGGW 5 cut(s) 118, 411, 441, 599, 1049
BsaXI ACNNNNNCTCC 2 cut(s) 164, 194
Bsc4I CCNNNNNNNGG 6 cut(s) 606, 1093, 1166, 1372, 1373, 1436
Bse118I RCCGGY 4 cut(s) 49, 215, 733, 997
Bse1I ACTGG 2 cut(s) 700, 724
Bse3DI GCAATG 2 cut(s) 778, 1343
Bse8I GATNNNNATC 2 cut(s) 429, 789
BseAI TCCGGA 2 cut(s) 411, 599
BseBI CCWGG 7 cut(s) 702, 1083, 1101, 1130, 1248, 1257, 1311
BseDI CCNNGG 7 cut(s) 36, 457, 564, 701, 1129, 1246, 1378
BseGI GGATG 2 cut(s) 307, 430
BseJI GATNNNNATC 2 cut(s) 429, 789
BseLI CCNNNNNNNGG 6 cut(s) 606, 1093, 1166, 1372, 1373, 1436
BseMI GCAATG 2 cut(s) 778, 1343
BseMII CTCAG 1 cut(s) 809
BseNI ACTGG 2 cut(s) 700, 724
BseSI GKGCMC 2 cut(s) 680, 1443
BseXI GCAGC 8 cut(s) 73, 76, 79, 634, 697, 789, 1096, 1123
BseYI CCCAGC 2 cut(s) 729, 1076
BshNI GGYRCC 1 cut(s) 1096
BsiHKAI GWGCWC 5 cut(s) 607, 1072, 1234, 1267, 1429
BslFI GGGAC 3 cut(s) 485, 712, 1234
BslI CCNNNNNNNGG 6 cut(s) 606, 1093, 1166, 1372, 1373, 1436
BsmAI GTCTC 3 cut(s) 206, 556, 1011
BsmFI GGGAC 3 cut(s) 485, 712, 1234
Bso31I GGTCTC 2 cut(s) 206, 556
Bsp120I GGGCCC 1 cut(s) 676
Bsp1286I GDGCHC 9 cut(s) 81, 96, 607, 680, 1072, 1234, 1267, 1429, 1443
Bsp13I TCCGGA 2 cut(s) 411, 599
BspCNI CTCAG 1 cut(s) 808
BspEI TCCGGA 2 cut(s) 411, 599
BspT107I GGYRCC 1 cut(s) 1096
BspTNI GGTCTC 2 cut(s) 206, 556
BsrBI CCGCTC 1 cut(s) 782
BsrDI GCAATG 2 cut(s) 778, 1343
BsrFI RCCGGY 4 cut(s) 49, 215, 733, 997
BsrI ACTGG 2 cut(s) 700, 724
BssAI RCCGGY 4 cut(s) 49, 215, 733, 997
BssECI CCNNGG 7 cut(s) 36, 457, 564, 701, 1129, 1246, 1378
BssNI GRCGYC 3 cut(s) 219, 257, 689
BssT1I CCWWGG 2 cut(s) 564, 1378
Bst2UI CCWGG 7 cut(s) 702, 1083, 1101, 1130, 1248, 1257, 1311
Bst4CI ACNGT 3 cut(s) 392, 515, 1421
Bst6I CTCTTC 6 cut(s) 129, 150, 186, 204, 590, 1387
BstACI GRCGYC 3 cut(s) 219, 257, 689
BstC8I GCNNGC 4 cut(s) 51, 658, 708, 1188
BstDEI CTNAG 1 cut(s) 795
BstDSI CCRYGG 1 cut(s) 457
BstF5I GGATG 2 cut(s) 307, 430
BstH2I RGCGCY 1 cut(s) 1166
BstHHI GCGC 1 cut(s) 1165
BstMAI GTCTC 3 cut(s) 206, 556, 1011
BstMWI GCNNNNNNNGC 9 cut(s) 67, 76, 611, 697, 716, 719, 850, 923, 1187
BstNI CCWGG 7 cut(s) 702, 1083, 1101, 1130, 1248, 1257, 1311
BstPAI GACNNNNGTC 1 cut(s) 218
BstSCI CCNGG 9 cut(s) 700, 1081, 1099, 1128, 1158, 1246, 1255, 1309, 1348
BstSLI GKGCMC 2 cut(s) 680, 1443
BstV1I GCAGC 8 cut(s) 73, 76, 79, 634, 697, 789, 1096, 1123
BstX2I RGATCY 6 cut(s) 265, 325, 408, 430, 447, 790
BstXI CCANNNNNNTGG 1 cut(s) 464
BstYI RGATCY 6 cut(s) 265, 325, 408, 430, 447, 790
BtgI CCRYGG 1 cut(s) 457
BtrI CACGTC 1 cut(s) 397
BtsCI GGATG 2 cut(s) 307, 430
BtsI GCAGTG 1 cut(s) 967
BtsIMutI CAGTG 1 cut(s) 967
Cac8I GCNNGC 4 cut(s) 51, 658, 708, 1188
CaiI CAGNNNCTG 1 cut(s) 802
CfoI GCGC 1 cut(s) 1165
Cfr10I RCCGGY 4 cut(s) 49, 215, 733, 997
CseI GACGC 2 cut(s) 208, 697
CsiI ACCWGGT 1 cut(s) 1099
Csp6I GTAC 4 cut(s) 181, 226, 511, 745
CviAII CATG 2 cut(s) 1268, 1403
CviQI GTAC 4 cut(s) 181, 226, 511, 745
DdeI CTNAG 1 cut(s) 795
DraIII CACNNNGTG 1 cut(s) 1103
DrdI GACNNNNNNGTC 1 cut(s) 256
DseDI GACNNNNNNGTC 1 cut(s) 256
EaeI YGGCCR 3 cut(s) 3, 51, 1084
Eam1104I CTCTTC 6 cut(s) 129, 150, 186, 204, 590, 1387
EarI CTCTTC 6 cut(s) 129, 150, 186, 204, 590, 1387
EciI GGCGGA 4 cut(s) 22, 278, 395, 1080
Ecl136II GAGCTC 2 cut(s) 605, 1232
Eco130I CCWWGG 2 cut(s) 564, 1378
Eco147I AGGCCT 1 cut(s) 41
Eco24I GRGCYC 5 cut(s) 81, 96, 607, 680, 1234
Eco31I GGTCTC 2 cut(s) 206, 556
Eco47I GGWCC 1 cut(s) 989
Eco53kI GAGCTC 2 cut(s) 605, 1232
Eco57I CTGAAG 1 cut(s) 389
EcoICRI GAGCTC 2 cut(s) 605, 1232
EcoO109I RGGNCCY 2 cut(s) 677, 842
EcoRI GAATTC 1 cut(s) 1045
EcoRII CCWGG 7 cut(s) 700, 1081, 1099, 1128, 1246, 1255, 1309
EcoT14I CCWWGG 2 cut(s) 564, 1378
EcoT38I GRGCYC 5 cut(s) 81, 96, 607, 680, 1234
ErhI CCWWGG 2 cut(s) 564, 1378
FaeI CATG 2 cut(s) 1271, 1406
FaqI GGGAC 3 cut(s) 485, 712, 1234
FatI CATG 2 cut(s) 1267, 1402
FauI CCCGC 1 cut(s) 1374
FauNDI CATATG 1 cut(s) 1089
FblI GTMKAC 1 cut(s) 141
FokI GGATG 2 cut(s) 314, 437
FriOI GRGCYC 5 cut(s) 81, 96, 607, 680, 1234
FspBI CTAG 2 cut(s) 1178, 1444
GlaI GCGC 1 cut(s) 1164
GsaI CCCAGC 2 cut(s) 733, 1080
GsuI CTGGAG 1 cut(s) 353
HaeII RGCGCY 1 cut(s) 1166
HgaI GACGC 2 cut(s) 208, 697
HhaI GCGC 1 cut(s) 1165
Hin1I GRCGYC 3 cut(s) 219, 257, 689
Hin1II CATG 2 cut(s) 1271, 1406
Hin6I GCGC 1 cut(s) 1163
HinP1I GCGC 1 cut(s) 1163
HincII GTYRAC 1 cut(s) 142
HindII GTYRAC 1 cut(s) 142
HinfI GANTC 6 cut(s) 23, 271, 319, 576, 592, 643
HphI GGTGA 3 cut(s) 370, 496, 527
Hpy166II GTNNAC 5 cut(s) 142, 457, 504, 747, 1243
Hpy188III TCNNGA 7 cut(s) 323, 332, 412, 555, 589, 600, 1389
Hpy8I GTNNAC 5 cut(s) 142, 457, 504, 747, 1243
HpyAV CCTTC 4 cut(s) 364, 833, 871, 970
HpyCH4III ACNGT 3 cut(s) 392, 515, 1421
HpyCH4IV ACGT 3 cut(s) 257, 282, 396
HpyCH4V TGCA 4 cut(s) 531, 917, 967, 1139
HpyF10VI GCNNNNNNNGC 9 cut(s) 67, 76, 611, 697, 716, 719, 850, 923, 1187
HpyF3I CTNAG 1 cut(s) 795
HpySE526I ACGT 3 cut(s) 257, 282, 396
Hsp92I GRCGYC 3 cut(s) 219, 257, 689
Hsp92II CATG 2 cut(s) 1271, 1406
HspAI GCGC 1 cut(s) 1163
Kpn2I TCCGGA 2 cut(s) 411, 599
KroI GCCGGC 1 cut(s) 49
KroNI GCCGGC 1 cut(s) 51
Lsp1109I GCAGC 8 cut(s) 73, 76, 79, 634, 697, 789, 1096, 1123
LweI GCATC 1 cut(s) 1148
MabI ACCWGGT 1 cut(s) 1099
MaeI CTAG 2 cut(s) 1178, 1444
MaeII ACGT 3 cut(s) 257, 282, 396
MaeIII GTNAC 4 cut(s) 241, 392, 542, 956
MbiI CCGCTC 1 cut(s) 782
MfeI CAATTG 1 cut(s) 662
MflI RGATCY 6 cut(s) 265, 325, 408, 430, 447, 790
MhlI GDGCHC 9 cut(s) 81, 96, 607, 680, 1072, 1234, 1267, 1429, 1443
MlsI TGGCCA 2 cut(s) 5, 1086
MluCI AATT 4 cut(s) 662, 946, 1045, 1116
MluNI TGGCCA 2 cut(s) 5, 1086
MlyI GAGTC 2 cut(s) 280, 586
MmeI TCCRAC 2 cut(s) 51, 381
Mox20I TGGCCA 2 cut(s) 5, 1086
MroI TCCGGA 2 cut(s) 411, 599
MroNI GCCGGC 1 cut(s) 49
MroXI GAANNNNTTC 1 cut(s) 449
MscI TGGCCA 2 cut(s) 5, 1086
MseI TTAA 1 cut(s) 1125
Msp20I TGGCCA 2 cut(s) 5, 1086
MspA1I CMGCKG 2 cut(s) 355, 1076
MspR9I CCNGG 9 cut(s) 702, 1083, 1101, 1130, 1160, 1248, 1257, 1311, 1350
MunI CAATTG 1 cut(s) 662
MvaI CCWGG 7 cut(s) 702, 1083, 1101, 1130, 1248, 1257, 1311
MwoI GCNNNNNNNGC 9 cut(s) 67, 76, 611, 697, 716, 719, 850, 923, 1187
NaeI GCCGGC 1 cut(s) 51
NciI CCSGG 2 cut(s) 1160, 1350
NdeI CATATG 1 cut(s) 1089
NgoMIV GCCGGC 1 cut(s) 49
NlaIII CATG 2 cut(s) 1271, 1406
NmeAIII GCCGAG 1 cut(s) 61
NmuCI GTSAC 3 cut(s) 392, 542, 956
PceI AGGCCT 1 cut(s) 41
PcsI WCGNNNNNNNCGW 4 cut(s) 251, 254, 266, 872
PdiI GCCGGC 1 cut(s) 51
PdmI GAANNNNTTC 1 cut(s) 449
PfeI GAWTC 4 cut(s) 23, 319, 576, 643
PflFI GACNNNGTC 2 cut(s) 256, 548
PflMI CCANNNNNTGG 1 cut(s) 1093
PfoI TCCNGGA 1 cut(s) 1309
PleI GAGTC 2 cut(s) 279, 586
PpsI GAGTC 2 cut(s) 279, 586
PshAI GACNNNNGTC 1 cut(s) 218
Psp124BI GAGCTC 2 cut(s) 607, 1234
Psp6I CCWGG 7 cut(s) 700, 1081, 1099, 1128, 1246, 1255, 1309
PspFI CCCAGC 2 cut(s) 729, 1076
PspGI CCWGG 7 cut(s) 700, 1081, 1099, 1128, 1246, 1255, 1309
PspOMI GGGCCC 1 cut(s) 676
PstNI CAGNNNCTG 1 cut(s) 802
PsuI RGATCY 6 cut(s) 265, 325, 408, 430, 447, 790
PsyI GACNNNGTC 2 cut(s) 256, 548
PvuII CAGCTG 2 cut(s) 355, 1076
RsaI GTAC 4 cut(s) 182, 227, 512, 746
RsaNI GTAC 4 cut(s) 181, 226, 511, 745
SacI GAGCTC 2 cut(s) 607, 1234
SalI GTCGAC 1 cut(s) 140
SaqAI TTAA 1 cut(s) 1125
SchI GAGTC 2 cut(s) 280, 586
ScrFI CCNGG 9 cut(s) 702, 1083, 1101, 1130, 1160, 1248, 1257, 1311, 1350
SduI GDGCHC 9 cut(s) 81, 96, 607, 680, 1072, 1234, 1267, 1429, 1443
SexAI ACCWGGT 1 cut(s) 1099
SfaNI GCATC 1 cut(s) 1148
SinI GGWCC 1 cut(s) 989
SmlI CTYRAG 1 cut(s) 1233
SmoI CTYRAG 1 cut(s) 1233
Sse9I AATT 4 cut(s) 662, 946, 1045, 1116
SseBI AGGCCT 1 cut(s) 41
SspMI CTAG 2 cut(s) 1178, 1444
SstI GAGCTC 2 cut(s) 607, 1234
StuI AGGCCT 1 cut(s) 41
StyD4I CCNGG 9 cut(s) 700, 1081, 1099, 1128, 1158, 1246, 1255, 1309, 1348
StyI CCWWGG 2 cut(s) 564, 1378
TaaI ACNGT 3 cut(s) 392, 515, 1421
TaiI ACGT 3 cut(s) 260, 285, 399
TaqI TCGA 6 cut(s) 21, 87, 141, 222, 646, 818
TasI AATT 4 cut(s) 662, 946, 1045, 1116
TatI WGTACW 2 cut(s) 225, 744
TauI GCSGC 6 cut(s) 297, 380, 628, 686, 722, 940
TfiI GAWTC 4 cut(s) 23, 319, 576, 643
Tru1I TTAA 1 cut(s) 1125
Tru9I TTAA 1 cut(s) 1125
TscAI CASTG 1 cut(s) 974
TseFI GTSAC 3 cut(s) 392, 542, 956
TseI GCWGC 8 cut(s) 61, 64, 67, 622, 710, 802, 1109, 1136
Tsp45I GTSAC 3 cut(s) 392, 542, 956
TspDTI ATGAA 1 cut(s) 568
TspGWI ACGGA 2 cut(s) 89, 248
TspRI CASTG 1 cut(s) 974
Tth111I GACNNNGTC 2 cut(s) 256, 548
Van91I CCANNNNNTGG 1 cut(s) 1093
VpaK11BI GGWCC 1 cut(s) 989
XapI RAATTY 2 cut(s) 946, 1045
XcmI CCANNNNNNNNNTGG 1 cut(s) 1369
XmiI GTMKAC 1 cut(s) 141
XmnI GAANNNNTTC 1 cut(s) 449
XspI CTAG 2 cut(s) 1178, 1444
ZraI GACGTC 1 cut(s) 258
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.