Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0003934

Physical Location & Seq

Genomic Coordinates Forward (+)

15236386 .. 15239513

Gene Structure 3128 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g23390.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2454 bp

ATGGCTTCTTCTTCTTCTGTACTGATTATGTTCTTACTCAGTACTGTTGTAGTTATCATCTCAATCATGATGAATGTGGAAGCTCAAAGAATCCACTCCAAATCCTATAACATCAGCTTGGACTCCTCTCTATCCCCCAACACTAACCTCAGTTCATGGCTCTCACCTTCAGGCCGTTTTGCCTTTGGTTTCTATCGACAAGGCAACGGCTTTGCTGTTGGAATATGGCTTGTCAATCAGCCTAAGCCACTAGTAGTCTGGACTGCAAACCGCGATGATCCGCCTGTATCCTCTAGCTCTACTCTAACATTGAAGAGAAATGGTCTTCTCCTTCAGAGTTATGATAAGCACCAAAAAGAAATAGCTGTTGCTAATTTCTCAAGTACGGGACCGAACTCAGCAACGTACGGGTCTGCAAGTTCAGCTGCACTGCTTGATTCTGGAAATTTTGTGGTTTACGACAATAACTCTACTGTTATCTGGGAGAGCTTTAGTTTTCCAACTGATACCATTCTGGGGGGTCAAAATCTGTATGCTCCCGACAGGTTGGTATCCAGTGCGTCTATATCAGATCATTCGAGTGGACGATTTCGGTTGTGGATGCAAGATGATGGAAACTTAGTTGCTTACCCAGTAAATAGCTCCGCGAATCCAGATAATGCTTATTGGTCTACTGGTACTTATGGTAAGGGTTTCAGTGTACACCTCAGTCTGAACATATCAGGTTTTCTCACTTTGCTACAGGATGACACTAGGGTGCTCACTTTGGTCAATGGATCGTATCATGGCCGGAGTTGGAATGTTATCCACCGCGCAACACTGGATGTGACTGGGATTCTTCGACTCTACATGCACAATTTTGTGAGCAATGATAGTACTAGTTCCAGGGAAGAGCTGGTTTGGTCCTTTTTGCAGGACGAGTGTGAAGTCAAAGGTACATGTGGCTTAAACAGTTACTGCACAGCAGTAGGAAACAAAACCAACTGCAATTGTTATCCAGGATTTGTGATCGACCCTACTGATACATCTGGCTGCTATCGGAATTCCAGTGGCGATGGCTGCACTAGCAATCATCAAGACCCTCGCTTGCAGTACAAGGTAGCTGAAATGGAGAATGTGATGTGGGGTGATCATCCATATTCATTGGTATCAAAGAAAAACCAGCAACTCTGTAGTGACTCTTGCCTGGAGGACTGCAATTGTGGGGCGGTCCTATATACAAATGCGAGTTGCAATATGTACAAGCTTCCAATTAGATACGGCAGGATTAGTAAAAATATATCTGAGAAAGGAATCAAAGGATTCATCAGGGTGGCTCTTGGAAGCGTCCGTAGACCAAAGCCTACTGTTCCGGTCAGTTGGAGGGGAGAAAACAAAAGCAATAAGAATAATATGCTTAAAATTCTTGCTCTAAGTCTGGGTTTCATAGCTTTCATGTGTTTTGTCTTTGCATTCTCTAGCTTCTTTTTATACAAGCACAGACTACATAGGTATCAGAAGCTGTTGCAGTATACAAACTCCGGATTAGTTGATCAAGGGTACTTCACTTTGCAATCATTTTCTTACACTGAGCTTGAAGAAGCAACAGATGGCTTCAAGGAAGAATTGGGAAGAGGCAGTTTTGGGGCTGTTTATAAAGGCACTCTGTCTGGCTCAACTGTTGCTGTCAAAAGACTGGAGAAAGTTGTGGAAGAAGGAGTAAGGGAGTTTAAAGCTGAAATCACTACCATCGGAAGAACTCATCACAGAAACCTAGTTCAGTTGCTTGGTTTCTGCATTGAGGGCTCTCGGAAGCTTCTCGTTTATGAATACATGAGCAATGGCTCACTTGCAGATGTTCTCTTCAAGGCCAAAGGGGTGCGGCTCTCTTGGAAAGAAAGAGCAGGACTTGTATTAGATGTGGCTAAGGGGGTCCTCTACTTACACGACGAGTGTAGTGTCCACATAATCCACTGCAATTTGAAACCCCAAAACATACTCCTGGATCACACTTGGACCGGCAAGATCTCAGATTTTGGTTTGGCAAGGCTACTAGTTCCAAGTGAAACAAAAATTAATTCTACTGGACTAGTTGACCAGAGAAGAAGTTATGCAGCACCGGAATTGAAGAAGAATGCCATGATATCAGTAAAAGCAGATATCTATAGTTTCGGTATTGTGCTCCTGGAGATTGTATGCTGCAGAAGAAACATAGAAGTGAATGTTTCAACACCGGATGATATGATTCTTTCGGATTGGGTATATAATTGCTATGCAGCTGGAGAGTTAGGTAGGCTTGTGGAGGAGGATGAAAATGTGGATTTGAAGACCCTAGAAAGAATGGTGAAAGTGGGGTTGTGGTGTGTTCAAGATGATCCAGCTCTCCGTCCATTCATGAAGAACGTCATCTTGATGTTGGAAGGGACCATGGACATACCAGTCCCTCCATCTCCAGGACATCCCCATCTTGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

B_lectin PAN_2 Pkinase Pkinase_Tyr S_locus_glycop

Protein Analysis

818

Amino Acids

90.77

Weight (kDa)

7.76

Isoelectric Point (pI)

38.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B_lectin	PF01453	85 - 178	1.8e-15	D-mannose binding lectin
S_locus_glycop	PF00954	258 - 336	2.8e-06	S-locus glycoprotein domain
PK_Tyr_Ser-Thr	PF07714	532 - 796	6.3e-43	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	533 - 792	7.9e-40	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0003934)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g23390
prunus_persica	Prupe.6G165100_v2.0.a1 Prupe.6G165400_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0118681 RchiOBHm_Chr2g0118741 RchiOBHm_Chr2g0118761
rosa_laevigata	RLG00000018419
rosa_multiflora	Rmu_co8322353.1_g000001 Rmu_sc0001814.1_g000026 Rmu_sc0001814.1_g000032 Rmu_sc0002700.1_g000009 Rmu_sc0002700.1_g000033 Rmu_sc0002700.1_g000035 Rmu_sc0002831.1_g000014 Rmu_sc0002831.1_g000017 Rmu_sc0002831.1_g000031 Rmu_sc0004399.1_g000001
rosa_roxburghii	Rroxscaffold_2G00124760 Rroxscaffold_2G00124850 Rroxscaffold_2G00124890 Rroxscaffold_2G00125410 Rroxscaffold_2G00125420
rosa_rugosa	Rorug02G0218400
rosa_samantha	Rh2AG274700 Rh2AG275000 Rh2AG275300 Rh2BG286500 Rh2BG286700 Rh2BG287100 Rh2DG301500 Rh2DG301700
rosa_wichuraiana	Rw2G021850 Rw2G021890 Rw2G021930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1635
AasI	GACNNNNNNGTC	1 cut(s)	2417
AccI	GTMKAC	3 cut(s)	671, 1333, 1511
AccII	CGCG	3 cut(s)	273, 647, 813
AccIII	TCCGGA	1 cut(s)	1520
AciI	CCGC	6 cut(s)	271, 281, 645, 811, 1208, 1861
AclWI	GGATC	4 cut(s)	272, 784, 1992, 2348
AcoI	YGGCCR	1 cut(s)	787
AcsI	RAATTY	3 cut(s)	445, 1042, 1401
AcuI	CTGAAG	2 cut(s)	153, 317
AfiI	CCNNNNNNNGG	2 cut(s)	516, 2432
AflIII	ACRYGT	1 cut(s)	938
AgsI	TTSAA	9 cut(s)	313, 1577, 1597, 1846, 1963, 2107, 2208, 2305, 2348
AhlI	ACTAGT	4 cut(s)	250, 878, 2032, 2068
AjnI	CCWGG	6 cut(s)	884, 997, 1185, 1980, 2163, 2431
AleI	CACNNNNGTG	1 cut(s)	755
Alw21I	GWGCWC	2 cut(s)	762, 2163
AlwI	GGATC	4 cut(s)	272, 784, 1992, 2348
AlwNI	CAGNNNCTG	2 cut(s)	957, 1501
Aor13HI	TCCGGA	1 cut(s)	1520
AoxI	GGCC	3 cut(s)	172, 787, 1848
ApeKI	GCWGC	6 cut(s)	425, 1032, 1059, 2093, 2178, 2255
ApoI	RAATTY	3 cut(s)	445, 1042, 1401
AseI	ATTAAT	1 cut(s)	2055
AspLEI	GCGC	1 cut(s)	815
AspS9I	GGNCC	6 cut(s)	389, 903, 1210, 1912, 1995, 2403
AsuHPI	GGTGA	3 cut(s)	156, 1139, 2335
AvaII	GGWCC	6 cut(s)	389, 903, 1210, 1912, 1995, 2403
BaeI	ACNNNNGTAYC	2 cut(s)	1475, 1508
BanII	GRGCYC	1 cut(s)	1787
BbsI	GAAGAC	2 cut(s)	317, 2312
Bbv12I	GWGCWC	2 cut(s)	762, 2163
BbvI	GCAGC	6 cut(s)	412, 1019, 1046, 2105, 2165, 2267
BccI	CCATC	6 cut(s)	605, 1049, 1583, 1736, 2434, 2451
BceAI	ACGGC	3 cut(s)	159, 223, 1276
BciT130I	CCWGG	6 cut(s)	886, 999, 1187, 1982, 2165, 2433
BciVI	GTATCC	2 cut(s)	298, 562
BclI	TGATCA	2 cut(s)	1129, 1531
BcuI	ACTAGT	4 cut(s)	250, 878, 2032, 2068
BfmI	CTRYAG	4 cut(s)	740, 1171, 2143, 2179
BfuI	GTATCC	2 cut(s)	298, 562
BglII	AGATCT	1 cut(s)	2004
BisI	GCNGC	7 cut(s)	426, 1033, 1060, 1862, 2094, 2179, 2256
BlsI	GCNGC	7 cut(s)	427, 1034, 1061, 1863, 2095, 2180, 2257
BmcAI	AGTACT	2 cut(s)	43, 877
Bme1390I	CCNGG	6 cut(s)	886, 999, 1187, 1982, 2165, 2433
Bme18I	GGWCC	6 cut(s)	389, 903, 1210, 1912, 1995, 2403
BmgT120I	GGNCC	6 cut(s)	389, 903, 1210, 1912, 1995, 2403
BmiI	GGNNCC	3 cut(s)	390, 1913, 2404
BmrFI	CCNGG	6 cut(s)	886, 999, 1187, 1982, 2165, 2433
BmrI	ACTGGG	2 cut(s)	626, 840
BmsI	GCATC	1 cut(s)	591
BmuI	ACTGGG	2 cut(s)	626, 840
BpiI	GAAGAC	2 cut(s)	317, 2312
BpmI	CTGGAG	5 cut(s)	1208, 1697, 2186, 2280, 2415
Bpu10I	CCTNAGC	2 cut(s)	243, 1905
BpuEI	CTTGAG	1 cut(s)	364
BsaJI	CCNNGG	2 cut(s)	885, 2406
BsaWI	WCCGGW	4 cut(s)	1351, 1520, 2098, 2212
Bsc4I	CCNNNNNNNGG	2 cut(s)	516, 2432
Bse118I	RCCGGY	1 cut(s)	1997
Bse1I	ACTGG	9 cut(s)	555, 632, 679, 825, 835, 1047, 1680, 2068, 2417
Bse3DI	GCAATG	2 cut(s)	874, 1825
BseAI	TCCGGA	1 cut(s)	1520
BseBI	CCWGG	6 cut(s)	886, 999, 1187, 1982, 2165, 2433
BseDI	CCNNGG	2 cut(s)	885, 2406
BseGI	GGATG	7 cut(s)	606, 751, 829, 1132, 2221, 2293, 2437
BseLI	CCNNNNNNNGG	2 cut(s)	516, 2432
BseMI	GCAATG	2 cut(s)	874, 1825
BseMII	CTCAG	7 cut(s)	52, 163, 411, 721, 1275, 1560, 2022
BseNI	ACTGG	9 cut(s)	555, 632, 679, 825, 835, 1047, 1680, 2068, 2417
BseRI	GAGGAG	2 cut(s)	115, 2297
BseXI	GCAGC	6 cut(s)	412, 1019, 1046, 2105, 2165, 2267
BsgI	GTGCAG	3 cut(s)	411, 943, 1045
Bsh1236I	CGCG	3 cut(s)	273, 647, 813
BshFI	GGCC	3 cut(s)	174, 789, 1850
BsiHKAI	GWGCWC	2 cut(s)	762, 2163
BsiSI	CCGG	6 cut(s)	790, 1352, 1521, 1998, 2099, 2213
BsiWI	CGTACG	1 cut(s)	405
BslFI	GGGAC	3 cut(s)	402, 2405, 2416
BslI	CCNNNNNNNGG	2 cut(s)	516, 2432
BsmFI	GGGAC	3 cut(s)	402, 2405, 2416
BsmI	GAATGC	2 cut(s)	1451, 2119
BsnI	GGCC	3 cut(s)	174, 789, 1850
Bsp1286I	GDGCHC	3 cut(s)	762, 1787, 2163
Bsp13I	TCCGGA	1 cut(s)	1520
Bsp1407I	TGTACA	2 cut(s)	700, 1239
Bsp143I	GATC	9 cut(s)	277, 571, 776, 1008, 1129, 1531, 1984, 2004, 2353
Bsp19I	CCATGG	1 cut(s)	2406
BspACI	CCGC	6 cut(s)	271, 281, 645, 811, 1208, 1861
BspANI	GGCC	3 cut(s)	174, 789, 1850
BspCNI	CTCAG	7 cut(s)	51, 162, 410, 720, 1276, 1561, 2021
BspEI	TCCGGA	1 cut(s)	1520
BspFNI	CGCG	3 cut(s)	273, 647, 813
BspHI	TCATGA	2 cut(s)	66, 2373
BspLI	GGNNCC	3 cut(s)	390, 1913, 2404
BspMAI	CTGCAG	1 cut(s)	2183
BspPI	GGATC	4 cut(s)	272, 784, 1992, 2348
BspQI	GCTCTTC	1 cut(s)	885
BsrDI	GCAATG	2 cut(s)	874, 1825
BsrFI	RCCGGY	1 cut(s)	1997
BsrGI	TGTACA	2 cut(s)	700, 1239
BsrI	ACTGG	9 cut(s)	555, 632, 679, 825, 835, 1047, 1680, 2068, 2417
BssAI	RCCGGY	1 cut(s)	1997
BssECI	CCNNGG	2 cut(s)	885, 2406
BssMI	GATC	9 cut(s)	277, 571, 776, 1008, 1129, 1531, 1984, 2004, 2353
BssNAI	GTATAC	1 cut(s)	1512
BssT1I	CCWWGG	1 cut(s)	2406
Bst1107I	GTATAC	1 cut(s)	1512
Bst2UI	CCWGG	6 cut(s)	886, 999, 1187, 1982, 2165, 2433
Bst4CI	ACNGT	5 cut(s)	46, 475, 953, 1348, 1660
Bst6I	CTCTTC	4 cut(s)	308, 885, 1606, 1847
BstAUI	TGTACA	2 cut(s)	700, 1239
BstC8I	GCNNGC	1 cut(s)	1088
BstDSI	CCRYGG	1 cut(s)	2406
BstF5I	GGATG	7 cut(s)	606, 751, 829, 1132, 2221, 2293, 2437
BstFNI	CGCG	3 cut(s)	273, 647, 813
BstHHI	GCGC	1 cut(s)	815
BstKTI	GATC	9 cut(s)	280, 574, 779, 1011, 1132, 1534, 1987, 2007, 2356
BstMBI	GATC	9 cut(s)	277, 571, 776, 1008, 1129, 1531, 1984, 2004, 2353
BstMWI	GCNNNNNNNGC	4 cut(s)	422, 1059, 1065, 1782
BstNI	CCWGG	6 cut(s)	886, 999, 1187, 1982, 2165, 2433
BstNSI	RCATGY	2 cut(s)	853, 942
BstSCI	CCNGG	6 cut(s)	884, 997, 1185, 1980, 2163, 2431
BstSFI	CTRYAG	4 cut(s)	740, 1171, 2143, 2179
BstUI	CGCG	3 cut(s)	273, 647, 813
BstV1I	GCAGC	6 cut(s)	412, 1019, 1046, 2105, 2165, 2267
BstV2I	GAAGAC	2 cut(s)	317, 2312
BstX2I	RGATCY	1 cut(s)	2004
BstYI	RGATCY	1 cut(s)	2004
BstZ17I	GTATAC	1 cut(s)	1512
BsuI	GTATCC	2 cut(s)	298, 562
BsuRI	GGCC	3 cut(s)	174, 789, 1850
BtgI	CCRYGG	1 cut(s)	2406
BtgZI	GCGATG	2 cut(s)	288, 1068
BtsCI	GGATG	7 cut(s)	606, 751, 829, 1132, 2221, 2293, 2437
BtsI	GCAGTG	2 cut(s)	428, 1951
BtsIMutI	CAGTG	7 cut(s)	428, 562, 703, 818, 1054, 1566, 1951
Cac8I	GCNNGC	1 cut(s)	1088
CaiI	CAGNNNCTG	2 cut(s)	957, 1501
CciI	TCATGA	2 cut(s)	66, 2373
CfoI	GCGC	1 cut(s)	815
Cfr10I	RCCGGY	1 cut(s)	1997
Cfr13I	GGNCC	6 cut(s)	389, 903, 1210, 1912, 1995, 2403
CseI	GACGC	2 cut(s)	549, 1315
DpnI	GATC	9 cut(s)	279, 573, 778, 1010, 1131, 1533, 1986, 2006, 2355
DpnII	GATC	9 cut(s)	277, 571, 776, 1008, 1129, 1531, 1984, 2004, 2353
DraI	TTTAAA	1 cut(s)	1711
DrdI	GACNNNNNNGTC	1 cut(s)	2417
DseDI	GACNNNNNNGTC	1 cut(s)	2417
EaeI	YGGCCR	1 cut(s)	787
Eam1104I	CTCTTC	4 cut(s)	308, 885, 1606, 1847
EarI	CTCTTC	4 cut(s)	308, 885, 1606, 1847
EciI	GGCGGA	1 cut(s)	270
Eco130I	CCWWGG	1 cut(s)	2406
Eco24I	GRGCYC	1 cut(s)	1787
Eco32I	GATATC	2 cut(s)	2124, 2140
Eco47I	GGWCC	6 cut(s)	389, 903, 1210, 1912, 1995, 2403
Eco57I	CTGAAG	2 cut(s)	153, 317
EcoO109I	RGGNCCY	1 cut(s)	1912
EcoRI	GAATTC	1 cut(s)	1042
EcoRII	CCWGG	6 cut(s)	884, 997, 1185, 1980, 2163, 2431
EcoRV	GATATC	2 cut(s)	2124, 2140
EcoT14I	CCWWGG	1 cut(s)	2406
EcoT38I	GRGCYC	1 cut(s)	1787
ErhI	CCWWGG	1 cut(s)	2406
FaqI	GGGAC	3 cut(s)	402, 2405, 2416
FbaI	TGATCA	2 cut(s)	1129, 1531
FblI	GTMKAC	3 cut(s)	671, 1333, 1511
Fnu4HI	GCNGC	7 cut(s)	426, 1033, 1060, 1862, 2094, 2179, 2256
FokI	GGATG	7 cut(s)	613, 758, 836, 1119, 2228, 2300, 2424
FriOI	GRGCYC	1 cut(s)	1787
Fsp4HI	GCNGC	7 cut(s)	426, 1033, 1060, 1862, 2094, 2179, 2256
GlaI	GCGC	1 cut(s)	814
GluI	GCNGC	7 cut(s)	426, 1033, 1060, 1862, 2094, 2179, 2256
GsuI	CTGGAG	5 cut(s)	1208, 1697, 2186, 2280, 2415
HaeIII	GGCC	3 cut(s)	174, 789, 1850
HapII	CCGG	6 cut(s)	790, 1352, 1521, 1998, 2099, 2213
HgaI	GACGC	2 cut(s)	549, 1315
HhaI	GCGC	1 cut(s)	815
Hin6I	GCGC	1 cut(s)	813
HinP1I	GCGC	1 cut(s)	813
HincII	GTYRAC	1 cut(s)	2074
HindII	GTYRAC	1 cut(s)	2074
HindIII	AAGCTT	2 cut(s)	1244, 1793
HpaII	CCGG	6 cut(s)	790, 1352, 1521, 1998, 2099, 2213
HphI	GGTGA	3 cut(s)	156, 1139, 2335
Hpy166II	GTNNAC	9 cut(s)	457, 584, 672, 701, 703, 1334, 1512, 1942, 2074
Hpy8I	GTNNAC	9 cut(s)	457, 584, 672, 701, 703, 1334, 1512, 1942, 2074
Hpy99I	CGWCG	1 cut(s)	1931
HpyAV	CCTTC	4 cut(s)	177, 341, 1688, 2393
HpyCH4III	ACNGT	5 cut(s)	46, 475, 953, 1348, 1660
HpyCH4IV	ACGT	2 cut(s)	404, 2382
HpyF10VI	GCNNNNNNNGC	4 cut(s)	422, 1059, 1065, 1782
HpySE526I	ACGT	2 cut(s)	404, 2382
HspAI	GCGC	1 cut(s)	813
Kpn2I	TCCGGA	1 cut(s)	1520
Ksp22I	TGATCA	2 cut(s)	1129, 1531
Kzo9I	GATC	9 cut(s)	277, 571, 776, 1008, 1129, 1531, 1984, 2004, 2353
LguI	GCTCTTC	1 cut(s)	885
LmnI	GCTCC	3 cut(s)	541, 647, 2166
Lsp1109I	GCAGC	6 cut(s)	412, 1019, 1046, 2105, 2165, 2267
LweI	GCATC	1 cut(s)	591
MaeII	ACGT	2 cut(s)	404, 2382
MaeIII	GTNAC	3 cut(s)	826, 953, 1175
MalI	GATC	9 cut(s)	279, 573, 778, 1010, 1131, 1533, 1986, 2006, 2355
MboI	GATC	9 cut(s)	277, 571, 776, 1008, 1129, 1531, 1984, 2004, 2353
MfeI	CAATTG	2 cut(s)	988, 1198
MflI	RGATCY	1 cut(s)	2004
MhlI	GDGCHC	3 cut(s)	762, 1787, 2163
MlyI	GAGTC	3 cut(s)	116, 837, 1172
MmeI	TCCRAC	5 cut(s)	199, 524, 776, 1340, 2376
MroI	TCCGGA	1 cut(s)	1520
MseI	TTAA	4 cut(s)	947, 1398, 1710, 2055
MslI	CAYNNNNRTG	5 cut(s)	579, 755, 1310, 2195, 2390
MspA1I	CMGCKG	2 cut(s)	425, 2258
MspI	CCGG	6 cut(s)	790, 1352, 1521, 1998, 2099, 2213
MspR9I	CCNGG	6 cut(s)	886, 999, 1187, 1982, 2165, 2433
MunI	CAATTG	2 cut(s)	988, 1198
Mva1269I	GAATGC	2 cut(s)	1451, 2119
MvaI	CCWGG	6 cut(s)	886, 999, 1187, 1982, 2165, 2433
MvnI	CGCG	3 cut(s)	273, 647, 813
MwoI	GCNNNNNNNGC	4 cut(s)	422, 1059, 1065, 1782
NcoI	CCATGG	1 cut(s)	2406
NdeII	GATC	9 cut(s)	277, 571, 776, 1008, 1129, 1531, 1984, 2004, 2353
NlaIV	GGNNCC	3 cut(s)	390, 1913, 2404
NmuCI	GTSAC	2 cut(s)	826, 1175
NspI	RCATGY	2 cut(s)	853, 942
OliI	CACNNNNGTG	1 cut(s)	755
PagI	TCATGA	2 cut(s)	66, 2373
PciI	ACATGT	1 cut(s)	938
PciSI	GCTCTTC	1 cut(s)	885
PctI	GAATGC	2 cut(s)	1451, 2119
PfeI	GAWTC	7 cut(s)	90, 437, 649, 835, 1293, 1302, 2224
Pfl23II	CGTACG	1 cut(s)	405
PfoI	TCCNGGA	4 cut(s)	997, 1980, 2163, 2431
PkrI	GCNGC	7 cut(s)	427, 1034, 1061, 1863, 2095, 2180, 2257
PleI	GAGTC	3 cut(s)	116, 837, 1172
PpsI	GAGTC	3 cut(s)	116, 837, 1172
PpuMI	RGGWCCY	1 cut(s)	1912
PscI	ACATGT	1 cut(s)	938
PshBI	ATTAAT	1 cut(s)	2055
PsiI	TTATAA	1 cut(s)	1635
Psp5II	RGGWCCY	1 cut(s)	1912
Psp6I	CCWGG	6 cut(s)	884, 997, 1185, 1980, 2163, 2431
PspGI	CCWGG	6 cut(s)	884, 997, 1185, 1980, 2163, 2431
PspLI	CGTACG	1 cut(s)	405
PspN4I	GGNNCC	3 cut(s)	390, 1913, 2404
PspPI	GGNCC	6 cut(s)	389, 903, 1210, 1912, 1995, 2403
PspPPI	RGGWCCY	1 cut(s)	1912
PstI	CTGCAG	1 cut(s)	2183
PstNI	CAGNNNCTG	2 cut(s)	957, 1501
PsuI	RGATCY	1 cut(s)	2004
PvuII	CAGCTG	2 cut(s)	425, 2258
RseI	CAYNNNNRTG	5 cut(s)	579, 755, 1310, 2195, 2390
SapI	GCTCTTC	1 cut(s)	885
SaqAI	TTAA	4 cut(s)	947, 1398, 1710, 2055
SatI	GCNGC	7 cut(s)	426, 1033, 1060, 1862, 2094, 2179, 2256
Sau3AI	GATC	9 cut(s)	277, 571, 776, 1008, 1129, 1531, 1984, 2004, 2353
Sau96I	GGNCC	6 cut(s)	389, 903, 1210, 1912, 1995, 2403
ScaI	AGTACT	2 cut(s)	43, 877
SchI	GAGTC	3 cut(s)	116, 837, 1172
ScrFI	CCNGG	6 cut(s)	886, 999, 1187, 1982, 2165, 2433
SduI	GDGCHC	3 cut(s)	762, 1787, 2163
SfaNI	GCATC	1 cut(s)	591
SfcI	CTRYAG	4 cut(s)	740, 1171, 2143, 2179
SinI	GGWCC	6 cut(s)	389, 903, 1210, 1912, 1995, 2403
SmiMI	CAYNNNNRTG	5 cut(s)	579, 755, 1310, 2195, 2390
SmlI	CTYRAG	1 cut(s)	379
SmoI	CTYRAG	1 cut(s)	379
SpeI	ACTAGT	4 cut(s)	250, 878, 2032, 2068
SsiI	CCGC	6 cut(s)	271, 281, 645, 811, 1208, 1861
StyD4I	CCNGG	6 cut(s)	884, 997, 1185, 1980, 2163, 2431
StyI	CCWWGG	1 cut(s)	2406
TaaI	ACNGT	5 cut(s)	46, 475, 953, 1348, 1660
TaiI	ACGT	2 cut(s)	407, 2385
TaqI	TCGA	4 cut(s)	196, 578, 841, 1011
TaqII	GACCGA	1 cut(s)	406
TatI	WGTACW	6 cut(s)	19, 41, 700, 875, 1092, 1239
TauI	GCSGC	1 cut(s)	1864
TfiI	GAWTC	7 cut(s)	90, 437, 649, 835, 1293, 1302, 2224
Tru1I	TTAA	4 cut(s)	947, 1398, 1710, 2055
Tru9I	TTAA	4 cut(s)	947, 1398, 1710, 2055
TscAI	CASTG	7 cut(s)	435, 562, 703, 825, 1054, 1573, 1958
TseFI	GTSAC	2 cut(s)	826, 1175
TseI	GCWGC	6 cut(s)	425, 1032, 1059, 2093, 2178, 2255
Tsp45I	GTSAC	2 cut(s)	826, 1175
TspGWI	ACGGA	2 cut(s)	1319, 2354
TspRI	CASTG	7 cut(s)	435, 562, 703, 825, 1054, 1573, 1958
VpaK11BI	GGWCC	6 cut(s)	389, 903, 1210, 1912, 1995, 2403
VspI	ATTAAT	1 cut(s)	2055
XapI	RAATTY	3 cut(s)	445, 1042, 1401
XceI	RCATGY	2 cut(s)	853, 942
XcmI	CCANNNNNNNNNTGG	2 cut(s)	255, 892
XmiI	GTMKAC	3 cut(s)	671, 1333, 1511
ZrmI	AGTACT	2 cut(s)	43, 877

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.