Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002700.1

Orthogroup ID

OG0003934

Physical Location & Seq

Genomic Coordinates Reverse (-)

71936 .. 75219

Gene Structure 3284 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002700.1_g000009.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2595 bp

atgtgcttcgatccccagcgtctggagcttctgatgctatcttggcgcggcgtgtggcagcgcgtcagcggtgatatgagggcgatccaaggctcgagcggtagcctgcctggccgtgccttcgcaggtcactccattggtgggagtcggtacctctggcggtacaatgagctcatgatgaatgtcgaagctgaaagaagccactccaaatcctataatatcagcttgggctcctctctatcccccaacactaacctcacttcatggctctcaccttctggccgttttgcctttggtttctatccacaaggcaacggttttgctgttggaatatggcttgtgaagcagcctaatccactagtggtctggactgcaaaccgcgatgatccgcctgtatcctcaagctctactctaacaatgaaaagagatggtctgttccttcagagttatgataagcatcgcaaagaaatagccgtcgctaatttctcagctaccggaccgaactcagcaattaggacgtacagtaatacttcagcgagttcagctgctatgcttgattctggaaattttgtagtttatggtaataagtcaattgtctgggagagctttggttttccaactgataccatactggggggtcaaaatctgtatgatgaaaatatgttggtatcaagtgcgtctatatcagaccattcgagtggacggttttgtttgaggatgcaattggatggaaacttggttgcttacccggtaaacagttccagaatttcagaaaatgcttattggtcttctggtactgctaatatgggtttcaatgtattcctcagtctgaacctatccggttttatcactttgctagacaaatctgaatctcgaggagtgaccgtgcagttgctcactttggcaaatggatcgtatcatagccaaggtgggaatgttatccaccgtgcgacactggatgtgaatggaattcttaggctctacatgcacaattttgtgagcaatgatggtactagttccagggaagtgatggtttggtcctctgtgcatgaccaatgtgaagtcaaaggaacatgtggcttaaacagttactgcacagtagtaggaaacaaagccaactgcaattgttatccgggatttgtgatcaaccctactgatacatttctcggctgctacccgaattccagtgacgatggctgcactagcaatcatcaagacccacgcttgcagtacaaggtagctgaaatggagaatgtgacgtggggtgatcatccttattcagtggtatcaatgaaaaaccagcatcgttgtagtgactcttgcctggaagactgcaattgtagggcagtgctatatatgaattcgagttgcaataaatacaagcttccaattagatacggtagaattagtaaaaatttatcagtgaaaggattcatcagggtagctcttgggaacgttggtgcaccaaaccatactgttccggttggttcgatgggagaaaacaaaagcaataagaataatatgctaagtattcttgctgtaactctgggatccatagctttcatgtgttttgtctttgcagtctctagtttcatcttatacaggcacagactgcataggtaccagaagctgttgcagtatacaaattccggattagttgatcaagggtacttcactttgcaattattttcttacaccgaacttgaagaagcaacagatggcttcaaggaagaattgggaagaggaagttttggagctgtttataaaggcagtctgtctggctcatcaggtaataaaactgttgctgttaaaagactcgagaaagttgtggaagaaggagtaagggaatttaaagctgaaatcactaccatcggaagaactcatcacagaaacttagttcagttgcttggtttctgcattgagggctctcggaagcttcttgtttatgaatacatgagcaatggttcacttgcagatcttctcttcaaggccaaaggggtgcggctctcttggaaagaaagagtaggacttgtattagatgtggctaaaggggtcctctacttacatgacgagtgtagtgttcacataatccactgcaatttgaaaccccaaaacatactcctggatcacacttggaccggtaagatctcagattttggtttggcaaggctactaatgccaaatgaaacaaaaattaattctactggaccagttgaacagagaagaagttacgcagcaccagaatggaagaagaatgccctgatatcagtgaaagcagatatctatagtttcggtattgtgcttctggagattgtatgctgcagaagaaacatagaagtaaatgattcaacaccagatgatatgattctttcggattgggtatataattgctttgcagctggagaattaggtaagcttgtggaggaggatgaaaatgtagatttgaagaccctagaaagaatggtgaaagtggggttgtggtgcgttcaaaatgatccagctctccgtccgttcatgaagaacatcatcttaatgttggaagggaccatggatataccagtccctccatctccagggcttccccatcttatttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

B_lectin PAN_2 Pkinase Pkinase_Tyr S_locus_glycop

Protein Analysis

864

Amino Acids

95.79

Weight (kDa)

8.21

Isoelectric Point (pI)

36.77

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003934)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g23390
prunus_persica	Prupe.6G165100_v2.0.a1 Prupe.6G165400_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0118681 RchiOBHm_Chr2g0118741 RchiOBHm_Chr2g0118761
rosa_laevigata	RLG00000018419
rosa_multiflora	Rmu_co8322353.1_g000001 Rmu_sc0001814.1_g000026 Rmu_sc0001814.1_g000032 Rmu_sc0002700.1_g000009 Rmu_sc0002700.1_g000033 Rmu_sc0002700.1_g000035 Rmu_sc0002831.1_g000014 Rmu_sc0002831.1_g000017 Rmu_sc0002831.1_g000031 Rmu_sc0004399.1_g000001
rosa_roxburghii	Rroxscaffold_2G00124760 Rroxscaffold_2G00124850 Rroxscaffold_2G00124890 Rroxscaffold_2G00125410 Rroxscaffold_2G00125420
rosa_rugosa	Rorug02G0218400
rosa_samantha	Rh2AG274700 Rh2AG275000 Rh2AG275300 Rh2BG286500 Rh2BG286700 Rh2BG287100 Rh2DG301500 Rh2DG301700
rosa_wichuraiana	Rw2G021850 Rw2G021890 Rw2G021930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1764
Acc36I	ACCTGC	1 cut(s)	116
Acc65I	GGTACC	2 cut(s)	150, 1620
AccB1I	GGYRCC	2 cut(s)	150, 1620
AccB7I	CCANNNNNTGG	1 cut(s)	22
AccBSI	CCGCTC	1 cut(s)	99
AccI	GTMKAC	1 cut(s)	1640
AccII	CGCG	3 cut(s)	48, 63, 381
AccIII	TCCGGA	1 cut(s)	1649
AciI	CCGC	7 cut(s)	48, 69, 99, 160, 379, 389, 2002
AclI	AACGTT	1 cut(s)	1455
AclWI	GGATC	8 cut(s)	5, 79, 380, 919, 1545, 1558, 2133, 2489
AcoI	YGGCCR	2 cut(s)	112, 280
AcsI	RAATTY	8 cut(s)	565, 765, 969, 1180, 1360, 1414, 1645, 1847
AcuI	CTGAAG	2 cut(s)	425, 516
AfaI	GTAC	8 cut(s)	152, 164, 521, 796, 1012, 1232, 1622, 1670
AfiI	CCNNNNNNNGG	4 cut(s)	22, 141, 633, 2573
AflIII	ACRYGT	1 cut(s)	1073
AgeI	ACCGGT	1 cut(s)	2138
AgsI	TTSAA	9 cut(s)	814, 1706, 1726, 1987, 2104, 2216, 2349, 2446, 2489
AhlI	ACTAGT	2 cut(s)	358, 1013
AjiI	CACGTC	1 cut(s)	1260
AjnI	CCWGG	5 cut(s)	109, 1019, 1323, 2121, 2572
Alw21I	GWGCWC	2 cut(s)	174, 1465
Alw26I	GTCTC	1 cut(s)	1588
Alw44I	GTGCAC	1 cut(s)	1461
AlwI	GGATC	8 cut(s)	5, 79, 380, 919, 1545, 1558, 2133, 2489
AlwNI	CAGNNNCTG	3 cut(s)	22, 1092, 1630
Ama87I	CYCGRG	3 cut(s)	94, 873, 1817
Aor13HI	TCCGGA	1 cut(s)	1649
AoxI	GGCC	3 cut(s)	112, 280, 1989
ApaLI	GTGCAC	1 cut(s)	1461
ApeKI	GCWGC	8 cut(s)	58, 346, 545, 1170, 1197, 2234, 2319, 2396
ApoI	RAATTY	8 cut(s)	565, 765, 969, 1180, 1360, 1414, 1645, 1847
AseI	ATTAAT	1 cut(s)	2196
AsiGI	ACCGGT	1 cut(s)	2138
Asp700I	GAANNNNTTC	1 cut(s)	1430
Asp718I	GGTACC	2 cut(s)	150, 1620
AspLEI	GCGC	2 cut(s)	48, 63
AspS9I	GGNCC	6 cut(s)	497, 1038, 2053, 2136, 2207, 2544
AsuC2I	CCSGG	2 cut(s)	749, 1134
AsuHPI	GGTGA	4 cut(s)	83, 264, 1277, 2476
AvaI	CYCGRG	3 cut(s)	94, 873, 1817
AvaII	GGWCC	6 cut(s)	497, 1038, 2053, 2136, 2207, 2544
BaeGI	GKGCMC	1 cut(s)	1465
BamHI	GGATCC	1 cut(s)	1550
BanI	GGYRCC	2 cut(s)	150, 1620
BanII	GRGCYC	3 cut(s)	174, 233, 1928
BbsI	GAAGAC	3 cut(s)	780, 1335, 2453
Bbv12I	GWGCWC	2 cut(s)	174, 1465
BbvI	GCAGC	8 cut(s)	70, 358, 532, 1157, 1184, 2246, 2306, 2408
BceAI	ACGGC	3 cut(s)	99, 267, 458
BcgI	CGANNNNNNTGC	2 cut(s)	894, 928
BciT130I	CCWGG	5 cut(s)	111, 1021, 1325, 2123, 2574
BciVI	GTATCC	1 cut(s)	406
BclI	TGATCA	3 cut(s)	1143, 1267, 1660
BcnI	CCSGG	2 cut(s)	749, 1134
BcoDI	GTCTC	1 cut(s)	1588
BcuI	ACTAGT	2 cut(s)	358, 1013
BfaI	CTAG	6 cut(s)	359, 857, 1014, 1203, 1587, 2453
BfmI	CTRYAG	2 cut(s)	2284, 2320
BfuAI	ACCTGC	1 cut(s)	116
BfuI	GTATCC	1 cut(s)	406
BglI	GCCNNNNNGGC	1 cut(s)	111
BglII	AGATCT	2 cut(s)	1975, 2145
Bme1390I	CCNGG	7 cut(s)	111, 749, 1021, 1134, 1325, 2123, 2574
Bme18I	GGWCC	6 cut(s)	497, 1038, 2053, 2136, 2207, 2544
BmeT110I	CYCGRG	3 cut(s)	94, 873, 1817
BmgBI	CACGTC	1 cut(s)	1260
BmgT120I	GGNCC	6 cut(s)	497, 1038, 2053, 2136, 2207, 2544
BmiI	GGNNCC	6 cut(s)	152, 232, 1552, 1622, 2054, 2545
BmrFI	CCNGG	7 cut(s)	111, 749, 1021, 1134, 1325, 2123, 2574
BmrI	ACTGGG	1 cut(s)	641
BmsI	GCATC	4 cut(s)	24, 466, 708, 1312
BmuI	ACTGGG	1 cut(s)	641
BpiI	GAAGAC	3 cut(s)	780, 1335, 2453
BpmI	CTGGAG	4 cut(s)	44, 2327, 2421, 2556
BpuEI	CTTGAG	1 cut(s)	385
BpuMI	CCSGG	2 cut(s)	749, 1134
BsaBI	GATNNNNATC	1 cut(s)	456
BsaJI	CCNNGG	5 cut(s)	88, 925, 1020, 2547, 2573
BsaWI	WCCGGW	5 cut(s)	494, 839, 1480, 1649, 2138
BsaXI	ACNNNNNCTCC	2 cut(s)	870, 900
Bsc4I	CCNNNNNNNGG	4 cut(s)	22, 141, 633, 2573
Bse118I	RCCGGY	1 cut(s)	2138
Bse1I	ACTGG	6 cut(s)	636, 960, 1185, 2209, 2210, 2558
Bse3DI	GCAATG	2 cut(s)	1009, 1966
Bse8I	GATNNNNATC	1 cut(s)	456
BseAI	TCCGGA	1 cut(s)	1649
BseBI	CCWGG	5 cut(s)	111, 1021, 1325, 2123, 2574
BseDI	CCNNGG	5 cut(s)	88, 925, 1020, 2547, 2573
BseGI	GGATG	5 cut(s)	723, 733, 964, 1270, 2434
BseJI	GATNNNNATC	1 cut(s)	456
BseLI	CCNNNNNNNGG	4 cut(s)	22, 141, 633, 2573
BseMI	GCAATG	2 cut(s)	1009, 1966
BseMII	CTCAG	4 cut(s)	501, 519, 838, 2163
BseNI	ACTGG	6 cut(s)	636, 960, 1185, 2209, 2210, 2558
BseRI	GAGGAG	3 cut(s)	223, 891, 2438
BseSI	GKGCMC	1 cut(s)	1465
BseXI	GCAGC	8 cut(s)	70, 358, 532, 1157, 1184, 2246, 2306, 2408
BseYI	CCCAGC	1 cut(s)	15
BsgI	GTGCAG	3 cut(s)	908, 1078, 1183
Bsh1236I	CGCG	3 cut(s)	48, 63, 381
BshFI	GGCC	3 cut(s)	114, 282, 1991
BshNI	GGYRCC	2 cut(s)	150, 1620
BshTI	ACCGGT	1 cut(s)	2138
BsiHKAI	GWGCWC	2 cut(s)	174, 1465
BsiHKCI	CYCGRG	3 cut(s)	94, 873, 1817
BsiSI	CCGG	7 cut(s)	495, 749, 840, 1133, 1481, 1650, 2139
BslFI	GGGAC	2 cut(s)	2546, 2557
BslI	CCNNNNNNNGG	4 cut(s)	22, 141, 633, 2573
BsmAI	GTCTC	1 cut(s)	1588
BsmFI	GGGAC	2 cut(s)	2546, 2557
BsmI	GAATGC	1 cut(s)	2260
BsnI	GGCC	3 cut(s)	114, 282, 1991
BsoBI	CYCGRG	3 cut(s)	94, 873, 1817
Bsp1286I	GDGCHC	4 cut(s)	174, 233, 1465, 1928
Bsp13I	TCCGGA	1 cut(s)	1649
Bsp19I	CCATGG	1 cut(s)	2547
BspACI	CCGC	7 cut(s)	48, 69, 99, 160, 379, 389, 2002
BspANI	GGCC	3 cut(s)	114, 282, 1991
BspCNI	CTCAG	4 cut(s)	500, 518, 837, 2162
BspEI	TCCGGA	1 cut(s)	1649
BspFNI	CGCG	3 cut(s)	48, 63, 381
BspHI	TCATGA	2 cut(s)	174, 2514
BspLI	GGNNCC	6 cut(s)	152, 232, 1552, 1622, 2054, 2545
BspMAI	CTGCAG	1 cut(s)	2324
BspMI	ACCTGC	1 cut(s)	116
BspPI	GGATC	8 cut(s)	5, 79, 380, 919, 1545, 1558, 2133, 2489
BspT107I	GGYRCC	2 cut(s)	150, 1620
BsrBI	CCGCTC	1 cut(s)	99
BsrDI	GCAATG	2 cut(s)	1009, 1966
BsrFI	RCCGGY	1 cut(s)	2138
BsrI	ACTGG	6 cut(s)	636, 960, 1185, 2209, 2210, 2558
BssAI	RCCGGY	1 cut(s)	2138
BssECI	CCNNGG	5 cut(s)	88, 925, 1020, 2547, 2573
BssNAI	GTATAC	1 cut(s)	1641
BssT1I	CCWWGG	3 cut(s)	88, 925, 2547
Bst1107I	GTATAC	1 cut(s)	1641
Bst2UI	CCWGG	5 cut(s)	111, 1021, 1325, 2123, 2574
Bst6I	CTCTTC	2 cut(s)	1735, 1988
BstAPI	GCANNNNNTGC	1 cut(s)	1612
BstC8I	GCNNGC	2 cut(s)	107, 1226
BstDEI	CTNAG	7 cut(s)	487, 505, 824, 974, 1526, 1894, 2149
BstDSI	CCRYGG	1 cut(s)	2547
BstF5I	GGATG	5 cut(s)	723, 733, 964, 1270, 2434
BstFNI	CGCG	3 cut(s)	48, 63, 381
BstHHI	GCGC	2 cut(s)	48, 63
BstMAI	GTCTC	1 cut(s)	1588
BstNI	CCWGG	5 cut(s)	111, 1021, 1325, 2123, 2574
BstNSI	RCATGY	2 cut(s)	988, 1077
BstSCI	CCNGG	7 cut(s)	109, 747, 1019, 1132, 1323, 2121, 2572
BstSFI	CTRYAG	2 cut(s)	2284, 2320
BstSLI	GKGCMC	1 cut(s)	1465
BstUI	CGCG	3 cut(s)	48, 63, 381
BstV1I	GCAGC	8 cut(s)	70, 358, 532, 1157, 1184, 2246, 2306, 2408
BstV2I	GAAGAC	3 cut(s)	780, 1335, 2453
BstX2I	RGATCY	3 cut(s)	1550, 1975, 2145
BstXI	CCANNNNNNTGG	1 cut(s)	698
BstYI	RGATCY	3 cut(s)	1550, 1975, 2145
BstZ17I	GTATAC	1 cut(s)	1641
BsuI	GTATCC	1 cut(s)	406
BsuRI	GGCC	3 cut(s)	114, 282, 1991
BtgI	CCRYGG	1 cut(s)	2547
BtgZI	GCGATG	2 cut(s)	396, 443
BtrI	CACGTC	1 cut(s)	1260
BtsCI	GGATG	5 cut(s)	723, 733, 964, 1270, 2434
BtsI	GCAGTG	2 cut(s)	1353, 2092
BtsIMutI	CAGTG	7 cut(s)	953, 1192, 1287, 1353, 1428, 2092, 2274
BveI	ACCTGC	1 cut(s)	116
Cac8I	GCNNGC	2 cut(s)	107, 1226
CaiI	CAGNNNCTG	3 cut(s)	22, 1092, 1630
CciI	TCATGA	2 cut(s)	174, 2514
CfoI	GCGC	2 cut(s)	48, 63
Cfr10I	RCCGGY	1 cut(s)	2138
Cfr13I	GGNCC	6 cut(s)	497, 1038, 2053, 2136, 2207, 2544
CpoI	CGGWCCG	1 cut(s)	497
CseI	GACGC	3 cut(s)	8, 52, 666
Csp6I	GTAC	8 cut(s)	151, 163, 520, 795, 1011, 1231, 1621, 1669
CspAI	ACCGGT	1 cut(s)	2138
CspI	CGGWCCG	1 cut(s)	497
CviQI	GTAC	8 cut(s)	151, 163, 520, 795, 1011, 1231, 1621, 1669
DdeI	CTNAG	7 cut(s)	487, 505, 824, 974, 1526, 1894, 2149
DraI	TTTAAA	1 cut(s)	1852
EaeI	YGGCCR	2 cut(s)	112, 280
Eam1104I	CTCTTC	2 cut(s)	1735, 1988
EarI	CTCTTC	2 cut(s)	1735, 1988
EciI	GGCGGA	1 cut(s)	378
Ecl136II	GAGCTC	1 cut(s)	172
Eco130I	CCWWGG	3 cut(s)	88, 925, 2547
Eco24I	GRGCYC	3 cut(s)	174, 233, 1928
Eco32I	GATATC	2 cut(s)	2265, 2281
Eco47I	GGWCC	6 cut(s)	497, 1038, 2053, 2136, 2207, 2544
Eco53kI	GAGCTC	1 cut(s)	172
Eco57I	CTGAAG	2 cut(s)	425, 516
Eco88I	CYCGRG	3 cut(s)	94, 873, 1817
EcoICRI	GAGCTC	1 cut(s)	172
EcoO109I	RGGNCCY	1 cut(s)	2053
EcoRI	GAATTC	3 cut(s)	969, 1180, 1360
EcoRII	CCWGG	5 cut(s)	109, 1019, 1323, 2121, 2572
EcoRV	GATATC	2 cut(s)	2265, 2281
EcoT14I	CCWWGG	3 cut(s)	88, 925, 2547
EcoT38I	GRGCYC	3 cut(s)	174, 233, 1928
ErhI	CCWWGG	3 cut(s)	88, 925, 2547
FaqI	GGGAC	2 cut(s)	2546, 2557
FbaI	TGATCA	3 cut(s)	1143, 1267, 1660
FblI	GTMKAC	1 cut(s)	1640
FokI	GGATG	5 cut(s)	730, 740, 971, 1257, 2441
FriOI	GRGCYC	3 cut(s)	174, 233, 1928
FspBI	CTAG	6 cut(s)	359, 857, 1014, 1203, 1587, 2453
GlaI	GCGC	2 cut(s)	47, 62
GsaI	CCCAGC	1 cut(s)	19
GsuI	CTGGAG	4 cut(s)	44, 2327, 2421, 2556
HaeIII	GGCC	3 cut(s)	114, 282, 1991
HapII	CCGG	7 cut(s)	495, 749, 840, 1133, 1481, 1650, 2139
HgaI	GACGC	3 cut(s)	8, 52, 666
HhaI	GCGC	2 cut(s)	48, 63
Hin6I	GCGC	2 cut(s)	46, 61
HinP1I	GCGC	2 cut(s)	46, 61
HindIII	AAGCTT	3 cut(s)	1382, 1934, 2414
HinfI	GANTC	8 cut(s)	145, 557, 869, 1316, 1431, 1815, 2345, 2365
HpaII	CCGG	7 cut(s)	495, 749, 840, 1133, 1481, 1650, 2139
HphI	GGTGA	4 cut(s)	83, 264, 1277, 2476
Hpy166II	GTNNAC	6 cut(s)	701, 754, 1463, 1641, 1967, 2083
Hpy8I	GTNNAC	6 cut(s)	701, 754, 1463, 1641, 1967, 2083
Hpy99I	CGWCG	1 cut(s)	479
HpyAV	CCTTC	5 cut(s)	130, 285, 449, 1829, 2534
HpyCH4IV	ACGT	3 cut(s)	518, 1259, 1455
HpyF3I	CTNAG	7 cut(s)	487, 505, 824, 974, 1526, 1894, 2149
HpySE526I	ACGT	3 cut(s)	518, 1259, 1455
HspAI	GCGC	2 cut(s)	46, 61
Kpn2I	TCCGGA	1 cut(s)	1649
KpnI	GGTACC	2 cut(s)	154, 1624
Ksp22I	TGATCA	3 cut(s)	1143, 1267, 1660
LmnI	GCTCC	3 cut(s)	25, 236, 1754
Lsp1109I	GCAGC	8 cut(s)	70, 358, 532, 1157, 1184, 2246, 2306, 2408
LweI	GCATC	4 cut(s)	24, 466, 708, 1312
MaeI	CTAG	6 cut(s)	359, 857, 1014, 1203, 1587, 2453
MaeII	ACGT	3 cut(s)	518, 1259, 1455
MaeIII	GTNAC	8 cut(s)	128, 880, 1088, 1187, 1255, 1313, 1540, 2228
MbiI	CCGCTC	1 cut(s)	99
MfeI	CAATTG	4 cut(s)	591, 722, 1123, 1336
MflI	RGATCY	3 cut(s)	1550, 1975, 2145
MhlI	GDGCHC	4 cut(s)	174, 233, 1465, 1928
MlyI	GAGTC	3 cut(s)	154, 1310, 1809
MmeI	TCCRAC	3 cut(s)	307, 641, 2517
MroI	TCCGGA	1 cut(s)	1649
MroXI	GAANNNNTTC	1 cut(s)	1430
MseI	TTAA	5 cut(s)	1082, 1809, 1851, 2196, 2531
MslI	CAYNNNNRTG	3 cut(s)	696, 2242, 2531
MspA1I	CMGCKG	3 cut(s)	69, 545, 2399
MspI	CCGG	7 cut(s)	495, 749, 840, 1133, 1481, 1650, 2139
MspR9I	CCNGG	7 cut(s)	111, 749, 1021, 1134, 1325, 2123, 2574
MunI	CAATTG	4 cut(s)	591, 722, 1123, 1336
Mva1269I	GAATGC	1 cut(s)	2260
MvaI	CCWGG	5 cut(s)	111, 1021, 1325, 2123, 2574
MvnI	CGCG	3 cut(s)	48, 63, 381
NciI	CCSGG	2 cut(s)	749, 1134
NcoI	CCATGG	1 cut(s)	2547
NlaIV	GGNNCC	6 cut(s)	152, 232, 1552, 1622, 2054, 2545
NmeAIII	GCCGAG	1 cut(s)	1146
NmuCI	GTSAC	5 cut(s)	128, 880, 1187, 1255, 1313
NspI	RCATGY	2 cut(s)	988, 1077
PaeR7I	CTCGAG	3 cut(s)	94, 873, 1817
PagI	TCATGA	2 cut(s)	174, 2514
PciI	ACATGT	1 cut(s)	1073
PctI	GAATGC	1 cut(s)	2260
PdmI	GAANNNNTTC	1 cut(s)	1430
PfeI	GAWTC	5 cut(s)	557, 869, 1431, 2345, 2365
PflMI	CCANNNNNTGG	1 cut(s)	22
PfoI	TCCNGGA	2 cut(s)	1132, 2121
PinAI	ACCGGT	1 cut(s)	2138
PleI	GAGTC	3 cut(s)	153, 1310, 1809
PpsI	GAGTC	3 cut(s)	153, 1310, 1809
PpuMI	RGGWCCY	1 cut(s)	2053
PscI	ACATGT	1 cut(s)	1073
PshBI	ATTAAT	1 cut(s)	2196
PsiI	TTATAA	1 cut(s)	1764
Psp124BI	GAGCTC	1 cut(s)	174
Psp1406I	AACGTT	1 cut(s)	1455
Psp5II	RGGWCCY	1 cut(s)	2053
Psp6I	CCWGG	5 cut(s)	109, 1019, 1323, 2121, 2572
PspFI	CCCAGC	1 cut(s)	15
PspGI	CCWGG	5 cut(s)	109, 1019, 1323, 2121, 2572
PspN4I	GGNNCC	6 cut(s)	152, 232, 1552, 1622, 2054, 2545
PspPI	GGNCC	6 cut(s)	497, 1038, 2053, 2136, 2207, 2544
PspPPI	RGGWCCY	1 cut(s)	2053
PspXI	VCTCGAGB	1 cut(s)	94
PstI	CTGCAG	1 cut(s)	2324
PstNI	CAGNNNCTG	3 cut(s)	22, 1092, 1630
PsuI	RGATCY	3 cut(s)	1550, 1975, 2145
PvuII	CAGCTG	2 cut(s)	545, 2399
RsaI	GTAC	8 cut(s)	152, 164, 521, 796, 1012, 1232, 1622, 1670
RsaNI	GTAC	8 cut(s)	151, 163, 520, 795, 1011, 1231, 1621, 1669
RseI	CAYNNNNRTG	3 cut(s)	696, 2242, 2531
Rsr2I	CGGWCCG	1 cut(s)	497
RsrII	CGGWCCG	1 cut(s)	497
SacI	GAGCTC	1 cut(s)	174
SaqAI	TTAA	5 cut(s)	1082, 1809, 1851, 2196, 2531
Sau96I	GGNCC	6 cut(s)	497, 1038, 2053, 2136, 2207, 2544
SchI	GAGTC	3 cut(s)	154, 1310, 1809
ScrFI	CCNGG	7 cut(s)	111, 749, 1021, 1134, 1325, 2123, 2574
SduI	GDGCHC	4 cut(s)	174, 233, 1465, 1928
SfaNI	GCATC	4 cut(s)	24, 466, 708, 1312
SfcI	CTRYAG	2 cut(s)	2284, 2320
Sfr274I	CTCGAG	3 cut(s)	94, 873, 1817
SinI	GGWCC	6 cut(s)	497, 1038, 2053, 2136, 2207, 2544
SlaI	CTCGAG	3 cut(s)	94, 873, 1817
SmiMI	CAYNNNNRTG	3 cut(s)	696, 2242, 2531
SmlI	CTYRAG	4 cut(s)	94, 400, 873, 1817
SmoI	CTYRAG	4 cut(s)	94, 400, 873, 1817
SpeI	ACTAGT	2 cut(s)	358, 1013
SsiI	CCGC	7 cut(s)	48, 69, 99, 160, 379, 389, 2002
SspMI	CTAG	6 cut(s)	359, 857, 1014, 1203, 1587, 2453
SstI	GAGCTC	1 cut(s)	174
StyD4I	CCNGG	7 cut(s)	109, 747, 1019, 1132, 1323, 2121, 2572
StyI	CCWWGG	3 cut(s)	88, 925, 2547
TaiI	ACGT	3 cut(s)	521, 1262, 1458
TaqI	TCGA	8 cut(s)	9, 95, 186, 695, 874, 1364, 1490, 1818
TaqII	GACCGA	1 cut(s)	514
TatI	WGTACW	1 cut(s)	1230
TauI	GCSGC	2 cut(s)	51, 2005
TfiI	GAWTC	5 cut(s)	557, 869, 1431, 2345, 2365
Tru1I	TTAA	5 cut(s)	1082, 1809, 1851, 2196, 2531
Tru9I	TTAA	5 cut(s)	1082, 1809, 1851, 2196, 2531
TscAI	CASTG	7 cut(s)	960, 1192, 1287, 1353, 1428, 2099, 2274
TseFI	GTSAC	5 cut(s)	128, 880, 1187, 1255, 1313
TseI	GCWGC	8 cut(s)	58, 346, 545, 1170, 1197, 2234, 2319, 2396
Tsp45I	GTSAC	5 cut(s)	128, 880, 1187, 1255, 1313
TspGWI	ACGGA	2 cut(s)	2495, 2499
TspRI	CASTG	7 cut(s)	960, 1192, 1287, 1353, 1428, 2099, 2274
Van91I	CCANNNNNTGG	1 cut(s)	22
VneI	GTGCAC	1 cut(s)	1461
VpaK11BI	GGWCC	6 cut(s)	497, 1038, 2053, 2136, 2207, 2544
VspI	ATTAAT	1 cut(s)	2196
XapI	RAATTY	8 cut(s)	565, 765, 969, 1180, 1360, 1414, 1645, 1847
XceI	RCATGY	2 cut(s)	988, 1077
XcmI	CCANNNNNNNNNTGG	2 cut(s)	363, 1027
XhoI	CTCGAG	3 cut(s)	94, 873, 1817
XmiI	GTMKAC	1 cut(s)	1640
XmnI	GAANNNNTTC	1 cut(s)	1430
XspI	CTAG	6 cut(s)	359, 857, 1014, 1203, 1587, 2453

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.