Rroxscaffold_2G00125410

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
Physical Location & Seq
Forward (+)
60173275 .. 60177311
4037 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00125410.1

Sequence Viewer

Length: 384 bp
ATGATGAAATCAGCTTTGATCAAGGATTTCTATACTGAAATTGATCGTCTCAAGCAAGGCAACGGCTTTGCTGTTGGTATACGGCTTCTTAATCCACCAAACAACACAGTTGTGTGGACTGCAAATCGAGATGACCCCCCTGTCTCCCCAAACTCTACACTGAAACTAACAAGAGACGGTCTGGCCTTGGTATCTGGTAAATCTGTATCAGACCACTCCAGTGGGCCATTTTCCCTGGAAATGTCTTATAGTGGAAACCTTGTAGCCTACCCACCAAACAGCTCTGCTGGTTATGGGCTTACAAGTATTGTGATCTCTGATACAGATTTTTATTTTTACAAACTCAATCTGAACCTGTACGTCGGGATTTCTCGTCCTGAATGA

Protein Analysis

127

Amino Acids

13.87

Weight (kDa)

6.56

Isoelectric Point (pI)

28.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 140
AccI GTMKAC 1 cut(s) 79
AfaI GTAC 1 cut(s) 359
AjnI CCWGG 1 cut(s) 234
AleI CACNNNNGTG 2 cut(s) 110, 219
AluBI AGCT 2 cut(s) 14, 282
AluI AGCT 2 cut(s) 14, 282
Alw26I GTCTC 3 cut(s) 53, 148, 168
AoxI GGCC 2 cut(s) 183, 224
AspS9I GGNCC 1 cut(s) 224
BceAI ACGGC 2 cut(s) 79, 98
BciT130I CCWGG 1 cut(s) 236
BclI TGATCA 1 cut(s) 18
BcoDI GTCTC 3 cut(s) 53, 148, 168
Bme1390I CCNGG 1 cut(s) 236
BmgT120I GGNCC 1 cut(s) 224
BmrFI CCNGG 1 cut(s) 236
BpmI CTGGAG 1 cut(s) 202
BpuEI CTTGAG 1 cut(s) 35
BsaJI CCNNGG 2 cut(s) 186, 234
Bse1I ACTGG 1 cut(s) 219
BseBI CCWGG 1 cut(s) 236
BseDI CCNNGG 2 cut(s) 186, 234
BseNI ACTGG 1 cut(s) 219
BshFI GGCC 2 cut(s) 185, 226
BsmAI GTCTC 3 cut(s) 53, 148, 168
BsmBI CGTCTC 2 cut(s) 53, 168
BsnI GGCC 2 cut(s) 185, 226
Bsp143I GATC 3 cut(s) 18, 43, 312
BspANI GGCC 2 cut(s) 185, 226
BsrI ACTGG 1 cut(s) 219
BssECI CCNNGG 2 cut(s) 186, 234
BssMI GATC 3 cut(s) 18, 43, 312
BssNAI GTATAC 1 cut(s) 80
BssT1I CCWWGG 1 cut(s) 186
Bst1107I GTATAC 1 cut(s) 80
Bst2UI CCWGG 1 cut(s) 236
Bst4CI ACNGT 2 cut(s) 109, 179
BstKTI GATC 3 cut(s) 21, 46, 315
BstMAI GTCTC 3 cut(s) 53, 148, 168
BstMBI GATC 3 cut(s) 18, 43, 312
BstNI CCWGG 1 cut(s) 236
BstSCI CCNGG 1 cut(s) 234
BstXI CCANNNNNNTGG 1 cut(s) 221
BstZ17I GTATAC 1 cut(s) 80
BsuRI GGCC 2 cut(s) 185, 226
BtsIMutI CAGTG 2 cut(s) 158, 226
Cfr13I GGNCC 1 cut(s) 224
Csp6I GTAC 1 cut(s) 358
CviJI RGCY 8 cut(s) 14, 66, 85, 185, 226, 266, 282, 298
CviKI_1 RGCY 8 cut(s) 14, 66, 85, 185, 226, 266, 282, 298
CviQI GTAC 1 cut(s) 358
DpnI GATC 3 cut(s) 20, 45, 314
DpnII GATC 3 cut(s) 18, 43, 312
DrdI GACNNNNNNGTC 1 cut(s) 140
DseDI GACNNNNNNGTC 1 cut(s) 140
Eco130I CCWWGG 1 cut(s) 186
EcoRII CCWGG 1 cut(s) 234
EcoT14I CCWWGG 1 cut(s) 186
ErhI CCWWGG 1 cut(s) 186
Esp3I CGTCTC 2 cut(s) 53, 168
FaiI YATR 4 cut(s) 33, 80, 249, 294
FbaI TGATCA 1 cut(s) 18
FblI GTMKAC 1 cut(s) 79
GsuI CTGGAG 1 cut(s) 202
HaeIII GGCC 2 cut(s) 185, 226
Hpy166II GTNNAC 2 cut(s) 80, 117
Hpy188I TCNGA 3 cut(s) 211, 319, 351
Hpy188III TCNNGA 3 cut(s) 128, 364, 377
Hpy8I GTNNAC 2 cut(s) 80, 117
Hpy99I CGWCG 1 cut(s) 365
HpyCH4III ACNGT 2 cut(s) 109, 179
HpyCH4IV ACGT 1 cut(s) 360
HpyCH4V TGCA 1 cut(s) 122
HpySE526I ACGT 1 cut(s) 360
Ksp22I TGATCA 1 cut(s) 18
Kzo9I GATC 3 cut(s) 18, 43, 312
LpnPI CCDG 8 cut(s) 153, 167, 180, 221, 232, 248, 273, 368
MaeII ACGT 1 cut(s) 360
MalI GATC 3 cut(s) 20, 45, 314
MboI GATC 3 cut(s) 18, 43, 312
MluCI AATT 1 cut(s) 39
MseI TTAA 1 cut(s) 90
MslI CAYNNNNRTG 2 cut(s) 110, 219
MspR9I CCNGG 1 cut(s) 236
MvaI CCWGG 1 cut(s) 236
NdeII GATC 3 cut(s) 18, 43, 312
OliI CACNNNNGTG 2 cut(s) 110, 219
Psp6I CCWGG 1 cut(s) 234
PspGI CCWGG 1 cut(s) 234
PspPI GGNCC 1 cut(s) 224
RsaI GTAC 1 cut(s) 359
RsaNI GTAC 1 cut(s) 358
RseI CAYNNNNRTG 2 cut(s) 110, 219
SaqAI TTAA 1 cut(s) 90
Sau3AI GATC 3 cut(s) 18, 43, 312
Sau96I GGNCC 1 cut(s) 224
ScrFI CCNGG 1 cut(s) 236
SetI ASST 5 cut(s) 16, 261, 284, 357, 363
SmiMI CAYNNNNRTG 2 cut(s) 110, 219
SmlI CTYRAG 1 cut(s) 50
SmoI CTYRAG 1 cut(s) 50
Sse9I AATT 1 cut(s) 39
StyD4I CCNGG 1 cut(s) 234
StyI CCWWGG 1 cut(s) 186
TaaI ACNGT 2 cut(s) 109, 179
TaiI ACGT 1 cut(s) 363
TaqI TCGA 1 cut(s) 127
TasI AATT 1 cut(s) 39
Tru1I TTAA 1 cut(s) 90
Tru9I TTAA 1 cut(s) 90
TscAI CASTG 2 cut(s) 165, 226
TspDTI ATGAA 1 cut(s) 20
TspRI CASTG 2 cut(s) 165, 226
XmiI GTMKAC 1 cut(s) 79
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.