Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0003934

Physical Location & Seq

Genomic Coordinates Reverse (-)

30568461 .. 30571079

Gene Structure 2619 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G021930.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2619 bp

ATGTTCTTCAATAATAGAGATTTTTCTGTGTTGATTGATCAGTCTAGCTATCGAACTCCTAGCTCCCTCATGGCTTCTTCTTCTGTACTGGTTGTATTCTTACTCAGTACTGTTTTGATTATTATCTCGATCATGCCCAATGTAAAAGCTCAAAGAAACCACTCCAAATCCAATTTAATCAGCCTGGGCTCCTCTCTATCCCCCAATGTTGATAACCTCAGTATTTCTTCATGGTTGTCATCTTCTGGCCGTTTCGCCTTCGGTTTCTACCCACAAGGCAACGGCTTTGCTGTTGGTATACGGCTTCTTAATCCACCAAACAACACAGTAGTGTGGACTGCAAATCGAGATGGCCCCCCTGTCTCCCCAAACTCTACATTGAAACTAACAAGAGACGGTCTCTTGCTTCGGTCAGAGGGAGGCCAAGAAATACCTATTACTAATGGCTCAAATTTACTAGAAACTAGTGCGATACCAAATGCATCAACTGCCGCTGCAGCTATGCTTGATTCCGGAAACTTTGTGCTGTATGATGAGACTTTTTCTGTTATATGGGAGAGCTTTGATTTCCCAACTGATACAATACTGGGAGGCCAAGATTTGAAGGCAGACATGGCCTTGGTATCTAGTGCATCTGCTACAGACCACTCTAGAGGGCGATTTTCCCTGGAGATGCAGGCTGATGGAAACCTTGTAGCCTACCGGCTAAACGGTCATTTTGCTTATTGGGCTGCTATAACCGATACTAGAAGTTACCAACTTAGTCTCAACCTATCAGGCTTTCTCGTTTTGATTCTTTTGAATAACCACCCCAGTGGTCTTTTTAATCCTTTTTATTTTCATAAAAACCAACCCAGTGGTCTGAGTACTCAGGTCTTGGCAAACGGCTCGTACCATCACCCACAAGACAATCAAACCACAATCTACCGAGCAACACTTGATGTCTATGGGAATTTCAAATTGTACTTGCATAACTTTCTGATGTCCGGTAGTCCAGAGGGAGCTGTAAAGGCTATTTGGTCAGCTTTGCAAGGTCCATGCGACGTCAAAGGCATTTGTGGCTTCAACAGTTATTGTGAAGTAGTCATGCAAAAGAAAGCAGCTGAAGTTGAGTGCAAATGTTACCCTGGGTTTGTTTACAACAACGCCAGTCAGAAGTCTCTGGGGTGCTACCATAATTTCACTGTAGACGGCTGCACCGGAAATGAGAAGCCACGGCTGCGGTACAAGGTAGAGGCCTTGGACAATACATCGTGGATTAATCATCCTTCTTCAGTGATACCTATTCAAAACAAGGAAGATTGCAGTGACTCTTGCCTGGAAGACTGCAACTGTTGGGCTGTGCTGTATACAGATGCTAATTGCAGTAAATACAAGCCTCCACTTTTATATGGCAAAACAAATTCAAGTATATCCTCTAAGGGTTTCTTCAAAGTGCTTCTACCGAGAAATATGGATGGCATGCCAAACAATTTTCCCGAACTAACCGAAAGCCTGACGGTAACTGAAAGCAAGAATAATAGTCTAATTCTAATTCTTGCCATCACTCTGGGTTCCATTGCATTCTTGTGTTTTGTCCTTGCCATCTCGAGTTTCACCATATACAAGCACCGAGTTCATAGGTACGAGAAGCTTTTGAAGCATTCGAGTTTGGCATTAGCTGATCAAGAGTACTTCACTTTACAATCGTTTTCTTATGCTGTGCTCGAAAGAGCAACAGATGGCTTCAAGGAAGAGATAGGAAGGGGTACTTTCGGAGCTGTTTATAAAGGAACTCTGTCCGGGGCCAGCTCTAACAAAACTGTTGCTGTTAAAAGACTGGAGAAAGTGGTTGATGAAGGAGTAAGGGAATTTATAGCTGAAATTACCACCATTGGACGGACTCACCACAGAAACTTAGTTCAGTTGCTTGGTTTCTGTATTGAGGGTTCTCGGAAGCTTCTTGTTTATGAATACATGAGCAACGGCTCACTTGCGGATCTTATCTTTAAGGCCAAAAGTGTGCACTCATCTTGGAAAGAAAGGGTAAGACTTGTATTCGATGTGGCTAAAGGGGTCCTCTATTTACATGACGAATGCAGTGTCCATATCATTCACTCCAATTTGAAACCCCAAAACGTACTCTTGGATCATACTTGGACGGCTAAGATATCTGATTTCGGTTTGGCCAGGCTGGTGCCAAATGAAACAAAAATAAACTCTACTGGAGGAGGAGAAGGAGGAGCGGGAACAGTCGAACAGGTGAGAAGAGGTTACTTGGCGCCTGAATGGCAGAGGAATGCTTTCATATCTGTAAAAGCTGATATCTACAGTTTTGGTACTGTGCTTTTAGAGATTGTATGTTGTAGAAGAAACATAGAAGTAAATGTTTCAACACCAGATGAGATAATTCTTTCGAGTTGGGTCAGTAAATGCTTTGCTGCTGGAGAATTAGATAAGCTTGTGGAGGAAGATGAAAATGTAGATTTGAAGACCCTAGAAAGAATGGTGAAAGTGGGGTTGTGGTGCGTTCAAGATGATCCAGCTTTGCGTCCTTTCATGAAGAATGTAATCTTGATGTTGGAAGGGACAATGGACATACCAGTTCCACCATGTCCAGAGCTTCCCTCTCTTGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

B_lectin PAN_2 Pkinase Pkinase_Tyr S_locus_glycop

Protein Analysis

872

Amino Acids

96.33

Weight (kDa)

6.39

Isoelectric Point (pI)

33.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B_lectin	PF01453	109 - 205	1e-15	D-mannose binding lectin
PK_Tyr_Ser-Thr	PF07714	576 - 850	8.4e-43	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	577 - 849	2.5e-39	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003934)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g23390
prunus_persica	Prupe.6G165100_v2.0.a1 Prupe.6G165400_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0118681 RchiOBHm_Chr2g0118741 RchiOBHm_Chr2g0118761
rosa_laevigata	RLG00000018419
rosa_multiflora	Rmu_co8322353.1_g000001 Rmu_sc0001814.1_g000026 Rmu_sc0001814.1_g000032 Rmu_sc0002700.1_g000009 Rmu_sc0002700.1_g000033 Rmu_sc0002700.1_g000035 Rmu_sc0002831.1_g000014 Rmu_sc0002831.1_g000017 Rmu_sc0002831.1_g000031 Rmu_sc0004399.1_g000001
rosa_roxburghii	Rroxscaffold_2G00124760 Rroxscaffold_2G00124850 Rroxscaffold_2G00124890 Rroxscaffold_2G00125410 Rroxscaffold_2G00125420
rosa_rugosa	Rorug02G0218400
rosa_samantha	Rh2AG274700 Rh2AG275000 Rh2AG275300 Rh2BG286500 Rh2BG286700 Rh2BG287100 Rh2DG301500 Rh2DG301700
rosa_wichuraiana	Rw2G021850 Rw2G021890 Rw2G021930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1767
AatII	GACGTC	1 cut(s)	1047
AccB1I	GGYRCC	2 cut(s)	2176, 2260
AccBSI	CCGCTC	1 cut(s)	2225
AccI	GTMKAC	3 cut(s)	298, 1188, 1349
AccIII	TCCGGA	1 cut(s)	512
AciI	CCGC	4 cut(s)	492, 1222, 1976, 2225
AclWI	GGATC	3 cut(s)	1986, 2136, 2513
AcoI	YGGCCR	2 cut(s)	247, 2166
AcsI	RAATTY	4 cut(s)	451, 952, 1402, 1850
AcuI	CTGAAG	2 cut(s)	1125, 1257
AcyI	GRCGYC	2 cut(s)	1044, 2261
AfiI	CCNNNNNNNGG	1 cut(s)	1878
AhlI	ACTAGT	1 cut(s)	464
AjnI	CCWGG	5 cut(s)	183, 666, 1126, 1317, 2168
AleI	CACNNNNGTG	2 cut(s)	329, 813
Alw21I	GWGCWC	2 cut(s)	1707, 2007
Alw26I	GTCTC	6 cut(s)	367, 387, 404, 530, 770, 1164
Alw44I	GTGCAC	1 cut(s)	2003
AlwI	GGATC	3 cut(s)	1986, 2136, 2513
Ama87I	CYCGRG	1 cut(s)	1588
Aor13HI	TCCGGA	1 cut(s)	512
AoxI	GGCC	9 cut(s)	247, 352, 421, 592, 615, 1236, 1785, 1992, 2166
ApaLI	GTGCAC	1 cut(s)	2003
ApeKI	GCWGC	7 cut(s)	494, 497, 731, 1100, 1194, 1219, 2420
ApoI	RAATTY	4 cut(s)	451, 952, 1402, 1850
ArsI	GACNNNNNNTTYG	2 cut(s)	2067, 2099
AseI	ATTAAT	1 cut(s)	1260
Asp700I	GAANNNNTTC	1 cut(s)	2282
AspLEI	GCGC	1 cut(s)	2263
AspS9I	GGNCC	4 cut(s)	353, 1034, 1785, 2056
AsuC2I	CCSGG	1 cut(s)	1783
AsuHPI	GGTGA	5 cut(s)	890, 1588, 1877, 2254, 2500
AvaI	CYCGRG	1 cut(s)	1588
AvaII	GGWCC	2 cut(s)	1034, 2056
BaeGI	GKGCMC	1 cut(s)	2007
BalI	TGGCCA	1 cut(s)	2168
BanI	GGYRCC	2 cut(s)	2176, 2260
BanII	GRGCYC	1 cut(s)	191
BbsI	GAAGAC	2 cut(s)	1329, 2477
Bbv12I	GWGCWC	2 cut(s)	1707, 2007
BbvI	GCAGC	7 cut(s)	481, 509, 718, 1112, 1181, 1206, 2407
BccI	CCATC	7 cut(s)	344, 677, 903, 1451, 1550, 1592, 1715
BceAI	ACGGC	8 cut(s)	234, 298, 317, 901, 1207, 1232, 1981, 2157
BcgI	CGANNNNNNTGC	2 cut(s)	870, 904
BciT130I	CCWGG	5 cut(s)	185, 668, 1128, 1319, 2170
BclI	TGATCA	2 cut(s)	37, 1663
BcnI	CCSGG	1 cut(s)	1783
BcoDI	GTCTC	6 cut(s)	367, 387, 404, 530, 770, 1164
BcuI	ACTAGT	1 cut(s)	464
BfaI	CTAG	8 cut(s)	45, 60, 458, 465, 627, 651, 747, 2477
BfmI	CTRYAG	4 cut(s)	495, 639, 1185, 2308
BfoI	RGCGCY	1 cut(s)	2264
BglI	GCCNNNNNGGC	1 cut(s)	2269
BisI	GCNGC	8 cut(s)	492, 495, 498, 732, 1101, 1195, 1220, 2421
BlsI	GCNGC	8 cut(s)	493, 496, 499, 733, 1102, 1196, 1221, 2422
BmcAI	AGTACT	3 cut(s)	109, 868, 1673
Bme1390I	CCNGG	6 cut(s)	185, 668, 1128, 1319, 1783, 2170
Bme18I	GGWCC	2 cut(s)	1034, 2056
BmeT110I	CYCGRG	1 cut(s)	1588
BmgT120I	GGNCC	4 cut(s)	353, 1034, 1785, 2056
BmiI	GGNNCC	7 cut(s)	190, 355, 1555, 1786, 2057, 2178, 2262
BmrFI	CCNGG	6 cut(s)	185, 668, 1128, 1319, 1783, 2170
BmrI	ACTGGG	3 cut(s)	596, 807, 849
BmsI	GCATC	4 cut(s)	491, 641, 663, 1345
BmuI	ACTGGG	3 cut(s)	596, 807, 849
BpiI	GAAGAC	2 cut(s)	1329, 2477
BplI	GAGNNNNNCTC	3 cut(s)	384, 416, 2591
BpmI	CTGGAG	4 cut(s)	689, 1841, 2226, 2445
BpuMI	CCSGG	1 cut(s)	1783
BsaBI	GATNNNNATC	1 cut(s)	122
BsaHI	GRCGYC	2 cut(s)	1044, 2261
BsaI	GGTCTC	1 cut(s)	404
BsaJI	CCNNGG	8 cut(s)	184, 618, 666, 1126, 1127, 1214, 1239, 1782
BsaWI	WCCGGW	3 cut(s)	512, 986, 1199
Bsc4I	CCNNNNNNNGG	1 cut(s)	1878
Bse118I	RCCGGY	1 cut(s)	702
Bse1I	ACTGG	8 cut(s)	93, 591, 813, 855, 1149, 1824, 2209, 2582
Bse3DI	GCAATG	1 cut(s)	1557
Bse8I	GATNNNNATC	1 cut(s)	122
BseAI	TCCGGA	1 cut(s)	512
BseBI	CCWGG	5 cut(s)	185, 668, 1128, 1319, 2170
BseDI	CCNNGG	8 cut(s)	184, 618, 666, 1126, 1127, 1214, 1239, 1782
BseGI	GGATG	2 cut(s)	1264, 1462
BseJI	GATNNNNATC	1 cut(s)	122
BseLI	CCNNNNNNNGG	1 cut(s)	1878
BseMI	GCAATG	1 cut(s)	1557
BseMII	CTCAG	4 cut(s)	118, 232, 854, 884
BseNI	ACTGG	8 cut(s)	93, 591, 813, 855, 1149, 1824, 2209, 2582
BseRI	GAGGAG	4 cut(s)	181, 2223, 2226, 2235
BseSI	GKGCMC	1 cut(s)	2007
BseXI	GCAGC	7 cut(s)	481, 509, 718, 1112, 1181, 1206, 2407
BsgI	GTGCAG	1 cut(s)	1180
BshFI	GGCC	9 cut(s)	249, 354, 423, 594, 617, 1238, 1787, 1994, 2168
BshNI	GGYRCC	2 cut(s)	2176, 2260
BsiHKAI	GWGCWC	2 cut(s)	1707, 2007
BsiHKCI	CYCGRG	1 cut(s)	1588
BsiSI	CCGG	5 cut(s)	513, 703, 987, 1200, 1782
BslFI	GGGAC	1 cut(s)	2581
BslI	CCNNNNNNNGG	1 cut(s)	1878
BsmAI	GTCTC	6 cut(s)	367, 387, 404, 530, 770, 1164
BsmBI	CGTCTC	1 cut(s)	387
BsmFI	GGGAC	1 cut(s)	2581
BsmI	GAATGC	4 cut(s)	1562, 1642, 2081, 2284
BsnI	GGCC	9 cut(s)	249, 354, 423, 594, 617, 1238, 1787, 1994, 2168
Bso31I	GGTCTC	1 cut(s)	404
BsoBI	CYCGRG	1 cut(s)	1588
Bsp1286I	GDGCHC	3 cut(s)	191, 1707, 2007
Bsp13I	TCCGGA	1 cut(s)	512
Bsp143I	GATC	6 cut(s)	37, 129, 1663, 1978, 2128, 2518
BspACI	CCGC	4 cut(s)	492, 1222, 1976, 2225
BspANI	GGCC	9 cut(s)	249, 354, 423, 594, 617, 1238, 1787, 1994, 2168
BspCNI	CTCAG	4 cut(s)	117, 231, 855, 883
BspEI	TCCGGA	1 cut(s)	512
BspHI	TCATGA	1 cut(s)	2538
BspLI	GGNNCC	7 cut(s)	190, 355, 1555, 1786, 2057, 2178, 2262
BspMAI	CTGCAG	1 cut(s)	499
BspPI	GGATC	3 cut(s)	1986, 2136, 2513
BspT107I	GGYRCC	2 cut(s)	2176, 2260
BspTNI	GGTCTC	1 cut(s)	404
BsrBI	CCGCTC	1 cut(s)	2225
BsrDI	GCAATG	1 cut(s)	1557
BsrFI	RCCGGY	1 cut(s)	702
BsrI	ACTGG	8 cut(s)	93, 591, 813, 855, 1149, 1824, 2209, 2582
BssAI	RCCGGY	1 cut(s)	702
BssECI	CCNNGG	8 cut(s)	184, 618, 666, 1126, 1127, 1214, 1239, 1782
BssMI	GATC	6 cut(s)	37, 129, 1663, 1978, 2128, 2518
BssNAI	GTATAC	2 cut(s)	299, 1350
BssNI	GRCGYC	2 cut(s)	1044, 2261
BssT1I	CCWWGG	2 cut(s)	618, 1239
Bst1107I	GTATAC	2 cut(s)	299, 1350
Bst2UI	CCWGG	5 cut(s)	185, 668, 1128, 1319, 2170
Bst6I	CTCTTC	2 cut(s)	1728, 2242
BstACI	GRCGYC	2 cut(s)	1044, 2261
BstAPI	GCANNNNNTGC	1 cut(s)	488
BstC8I	GCNNGC	3 cut(s)	678, 1463, 1789
BstDEI	CTNAG	8 cut(s)	104, 218, 761, 863, 870, 1419, 1897, 2145
BstDSI	CCRYGG	1 cut(s)	1214
BstF5I	GGATG	2 cut(s)	1264, 1462
BstH2I	RGCGCY	1 cut(s)	2264
BstHHI	GCGC	1 cut(s)	2263
BstKTI	GATC	6 cut(s)	40, 132, 1666, 1981, 2131, 2521
BstMAI	GTCTC	6 cut(s)	367, 387, 404, 530, 770, 1164
BstMBI	GATC	6 cut(s)	37, 129, 1663, 1978, 2128, 2518
BstMWI	GCNNNNNNNGC	9 cut(s)	488, 497, 614, 728, 1010, 1059, 1219, 1639, 2269
BstNI	CCWGG	5 cut(s)	185, 668, 1128, 1319, 2170
BstNSI	RCATGY	1 cut(s)	1465
BstSCI	CCNGG	6 cut(s)	183, 666, 1126, 1317, 1781, 2168
BstSFI	CTRYAG	4 cut(s)	495, 639, 1185, 2308
BstSLI	GKGCMC	1 cut(s)	2007
BstV1I	GCAGC	7 cut(s)	481, 509, 718, 1112, 1181, 1206, 2407
BstV2I	GAAGAC	2 cut(s)	1329, 2477
BstX2I	RGATCY	1 cut(s)	1978
BstXI	CCANNNNNNTGG	3 cut(s)	815, 857, 1549
BstYI	RGATCY	1 cut(s)	1978
BstZ17I	GTATAC	2 cut(s)	299, 1350
BsuRI	GGCC	9 cut(s)	249, 354, 423, 594, 617, 1238, 1787, 1994, 2168
BtgI	CCRYGG	1 cut(s)	1214
BtsCI	GGATG	2 cut(s)	1264, 1462
BtsI	GCAGTG	2 cut(s)	1312, 2086
BtsIMutI	CAGTG	6 cut(s)	820, 862, 1182, 1281, 1312, 2086
Cac8I	GCNNGC	3 cut(s)	678, 1463, 1789
CciI	TCATGA	1 cut(s)	2538
CfoI	GCGC	1 cut(s)	2263
Cfr10I	RCCGGY	1 cut(s)	702
Cfr13I	GGNCC	4 cut(s)	353, 1034, 1785, 2056
CseI	GACGC	1 cut(s)	2519
DdeI	CTNAG	8 cut(s)	104, 218, 761, 863, 870, 1419, 1897, 2145
DinI	GGCGCC	1 cut(s)	2262
DpnI	GATC	6 cut(s)	39, 131, 1665, 1980, 2130, 2520
DpnII	GATC	6 cut(s)	37, 129, 1663, 1978, 2128, 2518
EaeI	YGGCCR	2 cut(s)	247, 2166
Eam1104I	CTCTTC	2 cut(s)	1728, 2242
EarI	CTCTTC	2 cut(s)	1728, 2242
Eco130I	CCWWGG	2 cut(s)	618, 1239
Eco147I	AGGCCT	1 cut(s)	1238
Eco24I	GRGCYC	1 cut(s)	191
Eco31I	GGTCTC	1 cut(s)	404
Eco32I	GATATC	2 cut(s)	2151, 2305
Eco47I	GGWCC	2 cut(s)	1034, 2056
Eco57I	CTGAAG	2 cut(s)	1125, 1257
Eco88I	CYCGRG	1 cut(s)	1588
EcoO109I	RGGNCCY	1 cut(s)	2056
EcoRII	CCWGG	5 cut(s)	183, 666, 1126, 1317, 2168
EcoRV	GATATC	2 cut(s)	2151, 2305
EcoT14I	CCWWGG	2 cut(s)	618, 1239
EcoT22I	ATGCAT	1 cut(s)	484
EcoT38I	GRGCYC	1 cut(s)	191
EgeI	GGCGCC	1 cut(s)	2262
EheI	GGCGCC	1 cut(s)	2262
ErhI	CCWWGG	2 cut(s)	618, 1239
Esp3I	CGTCTC	1 cut(s)	387
FalI	AAGNNNNNCTT	4 cut(s)	1412, 1444, 1735, 1767
FaqI	GGGAC	1 cut(s)	2581
FauI	CCCGC	1 cut(s)	2218
FbaI	TGATCA	2 cut(s)	37, 1663
FblI	GTMKAC	3 cut(s)	298, 1188, 1349
Fnu4HI	GCNGC	8 cut(s)	492, 495, 498, 732, 1101, 1195, 1220, 2421
FokI	GGATG	2 cut(s)	1251, 1469
FriOI	GRGCYC	1 cut(s)	191
Fsp4HI	GCNGC	8 cut(s)	492, 495, 498, 732, 1101, 1195, 1220, 2421
FspBI	CTAG	8 cut(s)	45, 60, 458, 465, 627, 651, 747, 2477
GlaI	GCGC	1 cut(s)	2262
GluI	GCNGC	8 cut(s)	492, 495, 498, 732, 1101, 1195, 1220, 2421
GsuI	CTGGAG	4 cut(s)	689, 1841, 2226, 2445
HaeII	RGCGCY	1 cut(s)	2264
HaeIII	GGCC	9 cut(s)	249, 354, 423, 594, 617, 1238, 1787, 1994, 2168
HapII	CCGG	5 cut(s)	513, 703, 987, 1200, 1782
HgaI	GACGC	1 cut(s)	2519
HhaI	GCGC	1 cut(s)	2263
Hin1I	GRCGYC	2 cut(s)	1044, 2261
Hin6I	GCGC	1 cut(s)	2261
HinP1I	GCGC	1 cut(s)	2261
HindIII	AAGCTT	3 cut(s)	1631, 1937, 2438
HinfI	GANTC	4 cut(s)	509, 793, 1310, 1882
HpaII	CCGG	5 cut(s)	513, 703, 987, 1200, 1782
HphI	GGTGA	5 cut(s)	890, 1588, 1877, 2254, 2500
Hpy166II	GTNNAC	6 cut(s)	299, 336, 1138, 1189, 1350, 2005
Hpy188I	TCNGA	7 cut(s)	415, 864, 981, 1155, 1757, 1935, 2155
Hpy8I	GTNNAC	6 cut(s)	299, 336, 1138, 1189, 1350, 2005
Hpy99I	CGWCG	1 cut(s)	1046
HpyAV	CCTTC	7 cut(s)	268, 598, 1278, 1737, 1832, 2210, 2558
HpyCH4IV	ACGT	2 cut(s)	1044, 2118
HpyF10VI	GCNNNNNNNGC	9 cut(s)	488, 497, 614, 728, 1010, 1059, 1219, 1639, 2269
HpyF3I	CTNAG	8 cut(s)	104, 218, 761, 863, 870, 1419, 1897, 2145
HpySE526I	ACGT	2 cut(s)	1044, 2118
Hsp92I	GRCGYC	2 cut(s)	1044, 2261
HspAI	GCGC	1 cut(s)	2261
KasI	GGCGCC	1 cut(s)	2260
Kpn2I	TCCGGA	1 cut(s)	512
Ksp22I	TGATCA	2 cut(s)	37, 1663
Kzo9I	GATC	6 cut(s)	37, 129, 1663, 1978, 2128, 2518
LmnI	GCTCC	5 cut(s)	68, 194, 1001, 1757, 2222
Lsp1109I	GCAGC	7 cut(s)	481, 509, 718, 1112, 1181, 1206, 2407
LweI	GCATC	4 cut(s)	491, 641, 663, 1345
MaeI	CTAG	8 cut(s)	45, 60, 458, 465, 627, 651, 747, 2477
MaeII	ACGT	2 cut(s)	1044, 2118
MaeIII	GTNAC	5 cut(s)	752, 1121, 1307, 1501, 2252
MalI	GATC	6 cut(s)	39, 131, 1665, 1980, 2130, 2520
MbiI	CCGCTC	1 cut(s)	2225
MboI	GATC	6 cut(s)	37, 129, 1663, 1978, 2128, 2518
MflI	RGATCY	1 cut(s)	1978
MhlI	GDGCHC	3 cut(s)	191, 1707, 2007
MlsI	TGGCCA	1 cut(s)	2168
MluNI	TGGCCA	1 cut(s)	2168
Mly113I	GGCGCC	1 cut(s)	2261
MlyI	GAGTC	2 cut(s)	1304, 1876
MmeI	TCCRAC	1 cut(s)	2541
Mox20I	TGGCCA	1 cut(s)	2168
Mph1103I	ATGCAT	1 cut(s)	484
MroI	TCCGGA	1 cut(s)	512
MroXI	GAANNNNTTC	1 cut(s)	2282
MscI	TGGCCA	1 cut(s)	2168
MseI	TTAA	6 cut(s)	176, 309, 825, 1260, 1812, 1989
MslI	CAYNNNNRTG	3 cut(s)	329, 813, 1567
Msp20I	TGGCCA	1 cut(s)	2168
MspA1I	CMGCKG	2 cut(s)	494, 1103
MspI	CCGG	5 cut(s)	513, 703, 987, 1200, 1782
MspR9I	CCNGG	6 cut(s)	185, 668, 1128, 1319, 1783, 2170
Mva1269I	GAATGC	4 cut(s)	1562, 1642, 2081, 2284
MvaI	CCWGG	5 cut(s)	185, 668, 1128, 1319, 2170
MwoI	GCNNNNNNNGC	9 cut(s)	488, 497, 614, 728, 1010, 1059, 1219, 1639, 2269
NarI	GGCGCC	1 cut(s)	2261
NciI	CCSGG	1 cut(s)	1783
NdeII	GATC	6 cut(s)	37, 129, 1663, 1978, 2128, 2518
NlaIV	GGNNCC	7 cut(s)	190, 355, 1555, 1786, 2057, 2178, 2262
NmuCI	GTSAC	1 cut(s)	1307
NsiI	ATGCAT	1 cut(s)	484
NspI	RCATGY	1 cut(s)	1465
OliI	CACNNNNGTG	2 cut(s)	329, 813
PaeI	GCATGC	1 cut(s)	1465
PaeR7I	CTCGAG	1 cut(s)	1588
PagI	TCATGA	1 cut(s)	2538
PasI	CCCWGGG	1 cut(s)	1127
PceI	AGGCCT	1 cut(s)	1238
PctI	GAATGC	4 cut(s)	1562, 1642, 2081, 2284
PdmI	GAANNNNTTC	1 cut(s)	2282
PfeI	GAWTC	2 cut(s)	509, 793
PkrI	GCNGC	8 cut(s)	493, 496, 499, 733, 1102, 1196, 1221, 2422
PleI	GAGTC	2 cut(s)	1304, 1876
PluTI	GGCGCC	1 cut(s)	2264
PpsI	GAGTC	2 cut(s)	1304, 1876
PpuMI	RGGWCCY	1 cut(s)	2056
PshBI	ATTAAT	1 cut(s)	1260
PsiI	TTATAA	1 cut(s)	1767
Psp5II	RGGWCCY	1 cut(s)	2056
Psp6I	CCWGG	5 cut(s)	183, 666, 1126, 1317, 2168
PspGI	CCWGG	5 cut(s)	183, 666, 1126, 1317, 2168
PspN4I	GGNNCC	7 cut(s)	190, 355, 1555, 1786, 2057, 2178, 2262
PspPI	GGNCC	4 cut(s)	353, 1034, 1785, 2056
PspPPI	RGGWCCY	1 cut(s)	2056
PsrI	GAACNNNNNNTAC	2 cut(s)	1912, 1944
PstI	CTGCAG	1 cut(s)	499
PsuI	RGATCY	1 cut(s)	1978
PvuII	CAGCTG	1 cut(s)	1103
RseI	CAYNNNNRTG	3 cut(s)	329, 813, 1567
SaqAI	TTAA	6 cut(s)	176, 309, 825, 1260, 1812, 1989
SatI	GCNGC	8 cut(s)	492, 495, 498, 732, 1101, 1195, 1220, 2421
Sau3AI	GATC	6 cut(s)	37, 129, 1663, 1978, 2128, 2518
Sau96I	GGNCC	4 cut(s)	353, 1034, 1785, 2056
ScaI	AGTACT	3 cut(s)	109, 868, 1673
SchI	GAGTC	2 cut(s)	1304, 1876
ScrFI	CCNGG	6 cut(s)	185, 668, 1128, 1319, 1783, 2170
SduI	GDGCHC	3 cut(s)	191, 1707, 2007
SfaNI	GCATC	4 cut(s)	491, 641, 663, 1345
SfcI	CTRYAG	4 cut(s)	495, 639, 1185, 2308
SfoI	GGCGCC	1 cut(s)	2262
Sfr274I	CTCGAG	1 cut(s)	1588
SinI	GGWCC	2 cut(s)	1034, 2056
SlaI	CTCGAG	1 cut(s)	1588
SmiMI	CAYNNNNRTG	3 cut(s)	329, 813, 1567
SmlI	CTYRAG	1 cut(s)	1588
SmoI	CTYRAG	1 cut(s)	1588
SpeI	ACTAGT	1 cut(s)	464
SphI	GCATGC	1 cut(s)	1465
SseBI	AGGCCT	1 cut(s)	1238
SsiI	CCGC	4 cut(s)	492, 1222, 1976, 2225
SspDI	GGCGCC	1 cut(s)	2260
SspMI	CTAG	8 cut(s)	45, 60, 458, 465, 627, 651, 747, 2477
StuI	AGGCCT	1 cut(s)	1238
StyD4I	CCNGG	6 cut(s)	183, 666, 1126, 1317, 1781, 2168
StyI	CCWWGG	2 cut(s)	618, 1239
TaiI	ACGT	2 cut(s)	1047, 2121
TaqI	TCGA	9 cut(s)	52, 128, 346, 1589, 1646, 1707, 2040, 2235, 2396
TaqII	GACCGA	1 cut(s)	399
TatI	WGTACW	5 cut(s)	85, 107, 866, 963, 1671
TauI	GCSGC	1 cut(s)	494
TfiI	GAWTC	2 cut(s)	509, 793
Tru1I	TTAA	6 cut(s)	176, 309, 825, 1260, 1812, 1989
Tru9I	TTAA	6 cut(s)	176, 309, 825, 1260, 1812, 1989
TscAI	CASTG	6 cut(s)	820, 862, 1189, 1281, 1312, 2086
TseFI	GTSAC	1 cut(s)	1307
TseI	GCWGC	7 cut(s)	494, 497, 731, 1100, 1194, 1219, 2420
Tsp45I	GTSAC	1 cut(s)	1307
TspGWI	ACGGA	1 cut(s)	1894
TspRI	CASTG	6 cut(s)	820, 862, 1189, 1281, 1312, 2086
VneI	GTGCAC	1 cut(s)	2003
VpaK11BI	GGWCC	2 cut(s)	1034, 2056
VspI	ATTAAT	1 cut(s)	1260
XapI	RAATTY	4 cut(s)	451, 952, 1402, 1850
XbaI	TCTAGA	1 cut(s)	650
XceI	RCATGY	1 cut(s)	1465
XhoI	CTCGAG	1 cut(s)	1588
XmiI	GTMKAC	3 cut(s)	298, 1188, 1349
XmnI	GAANNNNTTC	1 cut(s)	2282
XspI	CTAG	8 cut(s)	45, 60, 458, 465, 627, 651, 747, 2477
ZraI	GACGTC	1 cut(s)	1045
ZrmI	AGTACT	3 cut(s)	109, 868, 1673
Zsp2I	ATGCAT	1 cut(s)	484

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.