Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0003934

Physical Location & Seq

Genomic Coordinates Forward (+)

30842483 .. 30844978

Gene Structure 2496 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ49145

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2496 bp

ATGGCTTCTTCTTCTTCTGTACTGGTTATATTCTTACTCAGTACTGTTTTGATTATCTCGATCATGCCCAATGTAAACGCGCAAAGAAACCACTCCAAATCCAATTTAATCAGCCCGGGCTCCTCTCTATCCCCCCATGGCTATAACCTCAGTATTTCTTCATGGTTGTCATCTTCTGGCCGTTTCGCCTTCGGTTTCTACCCACAAGGTAACGGCTTTGCGGTTGGTATACGGCTTCTTAATCCACCAAACAACACAGTAGTGTGGACCGCAAATCGAGATGACCCCCCTGTCTCCTCAAACTCTACACTGAAACTTACAGGAGACGGTCTCTTGCTTCGGTCAGAGGGAGGCCAAGAAATACCTATTACTAATGGCTCAAATTTACTAGAAACTAGTGCGATATCAAATGCATCAACTGCCGCTGCAGCTATGCTTGATTCCGGAAACTTTGTGCTGTATGATGAGACTTTTTTTGTTATATGGGAGAGCTTTGATTTCCCAACTGATACAATACTGGGAGGTCAAGATTTGCTGGCGTCCATGGGTCTGATATCTAGTGCATCTGTTGCAGACCACTCCAGCGGGCGATTTTCCCTGGAGATGCAGGATGATGGAAACCTTGTGGCCTACCCGCCAAACAGTTCTTCTCCTTATTTGGCTACTATGACCTTCGGTAGTTACCAACTTAGTCTCAACCTATCAGGCTTTCTCGTTTTGAGTAGCCAATCCAGTGGTCTGACTACTCAGGTCTTGGCAAACGGCTCGTACCATCACCCACAAGACAATAAAACCACAATCTACCGAGCAACACTTGATGTCGATGGGATTTTCAGATTGTACTTGCATAACTTTCTGATGTCCGGTAGTCCAGAGGGAGCTGTAAAGGCTATTTGGTCAGCTTTGCAAGATCCATGCGACGTCAAAGGCATTTGTGGCTTCAACAGTTATTGTGAAGTAGTCATGCAAAAGAAAGCAGCTGAAGTTCACTGCAAATGTTACCCTGGATTTGTTTACAACAACGCCAGTCAGATGTCTCTGGGGTGCTATCATAATTTCACTGTAGGAGGCTGCACCGGAAATGAAGAGCCACGGCTGCGGTACAAGGTAGCGGCCTTGGACAATACATCGTGGAGTAATCATCCTTATTCAGTGACACCTATTCAAAACAAGGAAGATTGCGGTGACTCTTGCCTGGGAGACTGCAATTGTTGGGCTGTGCTATATACAGATGCTGATTGCAGAAAATACAAGCTTCCACTTTTATATGGCAAAACAACTTCAAGTATATCCTCTAAAGGTTTCATCAAAGTGCTTCTACCGAGAAACATGGACAGTATGCCAAATAATTTTCCCTACCTACCCAAAAGTCCGACGGTAACTGAAAGCAAGAATAAGAGTCTAATTCTAATTCTTGCTATCAGTCTGGGTTCCATTGCATTCTTGTGTTCTGTCTTTGCCATCTCGAGTTTCGCCATATACATGCACCGAGTTCATAGGTACAAGAAGCTGTTGAAACATTCGAGTTTGGCATTAGCTGATCAAGAGTACTTCACTTTGCAATCATTTTCTTACTCTGAGCTAGAAAGAGCAACAGATGGCTTCAAGGAAGAGATAGGAAGGGGTACTTTCGGAGCTGTTTATAAAGGAACCCTGTCCGTGGGCAGCTCTAACAAAACTGTTGCTGTTAAAAGACTGGAGAAAGTGGTTGATGAAGGAGTAAGGGAATTTATAGCAGAAATGACCACCATTGGACGAACTCACCACAGAAACTTAATTCAGTTGCTTGGTTTCTGTACTGAGGGTTCTCGGAAGCTTCTTGTTTATGAATACATGAGCAACGGCTCACTTGCGGATCTTATCTTTAAGGCTAAAAGTGTTCACACATCTTGGAAAGAAAGGGTAAGACTTGTATTTGATGTGGCTAAAGGGGTCCTCTATTTACATGATGAGTGCAGTGTCCATATCATTCACTCCAATTTGAAACCCCAAAACGTACTCTTGGATCATACTTGGACGGCTAACATATCTGATTTCGGTTTGGCCAGGCTGGTGCCAAATGAAACAAAAATCAACTCTACTGGAGGAGAAGGAGGAGGAGCGGGAACAGTCGAACAGCTGAGAAGAGGTTACTTGGCGCCTGAATGGCAGAAGAATGCTCTCATATCTGTAAAAGCTGATATCTACAGTTTTGGTATTGTGCTTTTAGAGATTTTATGTTGTAGAAGAAACATAGAAGTAAATGTTTCAACAACAGACGAGATAATTCTTTCGAGTTGGGTCAGTAAGTGCTTTGCTGCTGGAGAATTAGATAAGCTTGTGGAGGACGATGAAAATGTAGATTTGAAAACCCTAGAAAGAATGGTGAAAGTGGGGTTGTGGTGCGTTCAAGATGATCCAGCTTTGCGTCCTTTCATGAAGAATATAATCTTGATGTTGGAAGGGACAATGGACATACCAGTTCCACCATGTCCAGAGCTTCCCTCTCTTGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

B_lectin PAN_2 Pkinase Pkinase_Tyr S_locus_glycop

Protein Analysis

831

Amino Acids

91.11

Weight (kDa)

6.12

Isoelectric Point (pI)

39.78

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B_lectin	PF01453	86 - 179	1.7e-15	D-mannose binding lectin
PK_Tyr_Ser-Thr	PF07714	535 - 810	8.2e-43	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	536 - 809	7.5e-39	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003934)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g23390
prunus_persica	Prupe.6G165100_v2.0.a1 Prupe.6G165400_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0118681 RchiOBHm_Chr2g0118741 RchiOBHm_Chr2g0118761
rosa_laevigata	RLG00000018419
rosa_multiflora	Rmu_co8322353.1_g000001 Rmu_sc0001814.1_g000026 Rmu_sc0001814.1_g000032 Rmu_sc0002700.1_g000009 Rmu_sc0002700.1_g000033 Rmu_sc0002700.1_g000035 Rmu_sc0002831.1_g000014 Rmu_sc0002831.1_g000017 Rmu_sc0002831.1_g000031 Rmu_sc0004399.1_g000001
rosa_roxburghii	Rroxscaffold_2G00124760 Rroxscaffold_2G00124850 Rroxscaffold_2G00124890 Rroxscaffold_2G00125410 Rroxscaffold_2G00125420
rosa_rugosa	Rorug02G0218400
rosa_samantha	Rh2AG274700 Rh2AG275000 Rh2AG275300 Rh2BG286500 Rh2BG286700 Rh2BG287100 Rh2DG301500 Rh2DG301700
rosa_wichuraiana	Rw2G021850 Rw2G021890 Rw2G021930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1644
AasI	GACNNNNNNGTC	1 cut(s)	290
AatII	GACGTC	1 cut(s)	924
AccB1I	GGYRCC	2 cut(s)	2053, 2137
AccBSI	CCGCTC	1 cut(s)	2102
AccI	GTMKAC	1 cut(s)	229
AccII	CGCG	1 cut(s)	80
AccIII	TCCGGA	1 cut(s)	443
AclWI	GGATC	4 cut(s)	905, 1863, 2013, 2390
AcoI	YGGCCR	2 cut(s)	178, 2043
AcsI	RAATTY	2 cut(s)	382, 1727
AcuI	CTGAAG	1 cut(s)	1002
AcyI	GRCGYC	3 cut(s)	539, 921, 2138
AfiI	CCNNNNNNNGG	1 cut(s)	1660
AgsI	TTSAA	9 cut(s)	943, 1166, 1284, 1516, 1606, 1984, 2250, 2347, 2390
AhlI	ACTAGT	1 cut(s)	395
AjnI	CCWGG	4 cut(s)	597, 1003, 1194, 2045
AjuI	GAANNNNNNNTTGG	2 cut(s)	631, 663
AleI	CACNNNNGTG	1 cut(s)	260
Alw26I	GTCTC	7 cut(s)	298, 318, 335, 461, 698, 1041, 1194
AlwI	GGATC	4 cut(s)	905, 1863, 2013, 2390
AlwNI	CAGNNNCTG	1 cut(s)	1235
Ama87I	CYCGRG	2 cut(s)	115, 1465
Aor13HI	TCCGGA	1 cut(s)	443
AoxI	GGCC	5 cut(s)	178, 352, 627, 1113, 2043
ApeKI	GCWGC	7 cut(s)	425, 428, 977, 1071, 1096, 1665, 2297
ApoI	RAATTY	2 cut(s)	382, 1727
AspLEI	GCGC	2 cut(s)	82, 2140
AspS9I	GGNCC	2 cut(s)	267, 1933
AsuC2I	CCSGG	2 cut(s)	116, 117
AsuHPI	GGTGA	4 cut(s)	767, 1196, 1754, 2377
AvaI	CYCGRG	2 cut(s)	115, 1465
AvaII	GGWCC	2 cut(s)	267, 1933
BalI	TGGCCA	1 cut(s)	2045
BanI	GGYRCC	2 cut(s)	2053, 2137
BanII	GRGCYC	1 cut(s)	122
BbvI	GCAGC	7 cut(s)	412, 440, 989, 1058, 1083, 1677, 2284
BccI	CCATC	5 cut(s)	608, 780, 818, 1469, 1592
BceAI	ACGGC	7 cut(s)	165, 229, 248, 778, 1109, 1858, 2034
BcgI	CGANNNNNNTGC	2 cut(s)	747, 781
BciT130I	CCWGG	4 cut(s)	599, 1005, 1196, 2047
BclI	TGATCA	1 cut(s)	1540
BcnI	CCSGG	2 cut(s)	116, 117
BcoDI	GTCTC	7 cut(s)	298, 318, 335, 461, 698, 1041, 1194
BcuI	ACTAGT	1 cut(s)	395
BfaI	CTAG	5 cut(s)	389, 396, 558, 1583, 2354
BfmI	CTRYAG	3 cut(s)	426, 1062, 2185
BfoI	RGCGCY	1 cut(s)	2141
BglI	GCCNNNNNGGC	1 cut(s)	2146
BisI	GCNGC	9 cut(s)	423, 426, 429, 978, 1072, 1097, 1113, 1666, 2298
BlsI	GCNGC	9 cut(s)	424, 427, 430, 979, 1073, 1098, 1114, 1667, 2299
BmcAI	AGTACT	2 cut(s)	43, 1550
Bme1390I	CCNGG	6 cut(s)	116, 117, 599, 1005, 1196, 2047
Bme18I	GGWCC	2 cut(s)	267, 1933
BmeT110I	CYCGRG	2 cut(s)	115, 1465
BmgT120I	GGNCC	2 cut(s)	267, 1933
BmiI	GGNNCC	6 cut(s)	121, 1432, 1651, 1934, 2055, 2139
BmrFI	CCNGG	6 cut(s)	116, 117, 599, 1005, 1196, 2047
BmrI	ACTGGG	1 cut(s)	527
BmsI	GCATC	4 cut(s)	422, 572, 594, 1222
BmuI	ACTGGG	1 cut(s)	527
BplI	GAGNNNNNCTC	3 cut(s)	315, 347, 2468
BpmI	CTGGAG	5 cut(s)	565, 620, 1718, 2103, 2322
BpuMI	CCSGG	2 cut(s)	116, 117
BsaHI	GRCGYC	3 cut(s)	539, 921, 2138
BsaI	GGTCTC	1 cut(s)	335
BsaJI	CCNNGG	9 cut(s)	115, 136, 543, 597, 1003, 1091, 1116, 1195, 1659
BsaWI	WCCGGW	3 cut(s)	443, 863, 1076
Bsc4I	CCNNNNNNNGG	1 cut(s)	1660
Bse1I	ACTGG	7 cut(s)	27, 522, 732, 1026, 1701, 2086, 2459
Bse3DI	GCAATG	1 cut(s)	1434
BseAI	TCCGGA	1 cut(s)	443
BseBI	CCWGG	4 cut(s)	599, 1005, 1196, 2047
BseDI	CCNNGG	9 cut(s)	115, 136, 543, 597, 1003, 1091, 1116, 1195, 1659
BseGI	GGATG	2 cut(s)	616, 1141
BseLI	CCNNNNNNNGG	1 cut(s)	1660
BseMI	GCAATG	1 cut(s)	1434
BseMII	CTCAG	6 cut(s)	52, 163, 761, 1569, 1791, 2111
BseNI	ACTGG	7 cut(s)	27, 522, 732, 1026, 1701, 2086, 2459
BseRI	GAGGAG	5 cut(s)	112, 286, 2100, 2109, 2112
BseXI	GCAGC	7 cut(s)	412, 440, 989, 1058, 1083, 1677, 2284
BsgI	GTGCAG	2 cut(s)	1057, 1975
Bsh1236I	CGCG	1 cut(s)	80
BshFI	GGCC	5 cut(s)	180, 354, 629, 1115, 2045
BshNI	GGYRCC	2 cut(s)	2053, 2137
BsiHKCI	CYCGRG	2 cut(s)	115, 1465
BsiSI	CCGG	4 cut(s)	116, 444, 864, 1077
BslFI	GGGAC	1 cut(s)	2458
BslI	CCNNNNNNNGG	1 cut(s)	1660
BsmAI	GTCTC	7 cut(s)	298, 318, 335, 461, 698, 1041, 1194
BsmBI	CGTCTC	1 cut(s)	318
BsmFI	GGGAC	1 cut(s)	2458
BsmI	GAATGC	2 cut(s)	1439, 2161
BsnI	GGCC	5 cut(s)	180, 354, 629, 1115, 2045
Bso31I	GGTCTC	1 cut(s)	335
BsoBI	CYCGRG	2 cut(s)	115, 1465
Bsp1286I	GDGCHC	1 cut(s)	122
Bsp13I	TCCGGA	1 cut(s)	443
Bsp143I	GATC	6 cut(s)	60, 910, 1540, 1855, 2005, 2395
Bsp19I	CCATGG	2 cut(s)	136, 543
BspANI	GGCC	5 cut(s)	180, 354, 629, 1115, 2045
BspCNI	CTCAG	6 cut(s)	51, 162, 760, 1570, 1792, 2112
BspEI	TCCGGA	1 cut(s)	443
BspFNI	CGCG	1 cut(s)	80
BspHI	TCATGA	1 cut(s)	2415
BspLI	GGNNCC	6 cut(s)	121, 1432, 1651, 1934, 2055, 2139
BspMAI	CTGCAG	1 cut(s)	430
BspPI	GGATC	4 cut(s)	905, 1863, 2013, 2390
BspQI	GCTCTTC	1 cut(s)	1080
BspT107I	GGYRCC	2 cut(s)	2053, 2137
BspTNI	GGTCTC	1 cut(s)	335
BsrBI	CCGCTC	1 cut(s)	2102
BsrDI	GCAATG	1 cut(s)	1434
BsrI	ACTGG	7 cut(s)	27, 522, 732, 1026, 1701, 2086, 2459
BssECI	CCNNGG	9 cut(s)	115, 136, 543, 597, 1003, 1091, 1116, 1195, 1659
BssMI	GATC	6 cut(s)	60, 910, 1540, 1855, 2005, 2395
BssNAI	GTATAC	1 cut(s)	230
BssNI	GRCGYC	3 cut(s)	539, 921, 2138
BssT1I	CCWWGG	3 cut(s)	136, 543, 1116
Bst1107I	GTATAC	1 cut(s)	230
Bst2UI	CCWGG	4 cut(s)	599, 1005, 1196, 2047
Bst6I	CTCTTC	3 cut(s)	1080, 1605, 2119
BstACI	GRCGYC	3 cut(s)	539, 921, 2138
BstAPI	GCANNNNNTGC	2 cut(s)	419, 569
BstC8I	GCNNGC	2 cut(s)	537, 587
BstDEI	CTNAG	7 cut(s)	38, 149, 689, 747, 1578, 1800, 2120
BstDSI	CCRYGG	4 cut(s)	136, 543, 1091, 1659
BstF5I	GGATG	2 cut(s)	616, 1141
BstFNI	CGCG	1 cut(s)	80
BstH2I	RGCGCY	1 cut(s)	2141
BstHHI	GCGC	2 cut(s)	82, 2140
BstKTI	GATC	6 cut(s)	63, 913, 1543, 1858, 2008, 2398
BstMAI	GTCTC	7 cut(s)	298, 318, 335, 461, 698, 1041, 1194
BstMBI	GATC	6 cut(s)	60, 910, 1540, 1855, 2005, 2395
BstMWI	GCNNNNNNNGC	7 cut(s)	419, 428, 569, 887, 936, 1096, 2146
BstNI	CCWGG	4 cut(s)	599, 1005, 1196, 2047
BstNSI	RCATGY	1 cut(s)	1486
BstSCI	CCNGG	6 cut(s)	114, 115, 597, 1003, 1194, 2045
BstSFI	CTRYAG	3 cut(s)	426, 1062, 2185
BstUI	CGCG	1 cut(s)	80
BstV1I	GCAGC	7 cut(s)	412, 440, 989, 1058, 1083, 1677, 2284
BstX2I	RGATCY	2 cut(s)	910, 1855
BstXI	CCANNNNNNTGG	1 cut(s)	734
BstYI	RGATCY	2 cut(s)	910, 1855
BstZ17I	GTATAC	1 cut(s)	230
BsuRI	GGCC	5 cut(s)	180, 354, 629, 1115, 2045
BtgI	CCRYGG	4 cut(s)	136, 543, 1091, 1659
BtsCI	GGATG	2 cut(s)	616, 1141
BtsI	GCAGTG	2 cut(s)	988, 1963
BtsIMutI	CAGTG	6 cut(s)	308, 739, 988, 1059, 1158, 1963
Cac8I	GCNNGC	2 cut(s)	537, 587
CaiI	CAGNNNCTG	1 cut(s)	1235
CciI	TCATGA	1 cut(s)	2415
CfoI	GCGC	2 cut(s)	82, 2140
Cfr13I	GGNCC	2 cut(s)	267, 1933
Cfr9I	CCCGGG	1 cut(s)	115
CseI	GACGC	2 cut(s)	528, 2396
DdeI	CTNAG	7 cut(s)	38, 149, 689, 747, 1578, 1800, 2120
DinI	GGCGCC	1 cut(s)	2139
DpnI	GATC	6 cut(s)	62, 912, 1542, 1857, 2007, 2397
DpnII	GATC	6 cut(s)	60, 910, 1540, 1855, 2005, 2395
DrdI	GACNNNNNNGTC	1 cut(s)	290
DseDI	GACNNNNNNGTC	1 cut(s)	290
EaeI	YGGCCR	2 cut(s)	178, 2043
Eam1104I	CTCTTC	3 cut(s)	1080, 1605, 2119
EarI	CTCTTC	3 cut(s)	1080, 1605, 2119
Eco130I	CCWWGG	3 cut(s)	136, 543, 1116
Eco24I	GRGCYC	1 cut(s)	122
Eco31I	GGTCTC	1 cut(s)	335
Eco32I	GATATC	3 cut(s)	405, 555, 2182
Eco47I	GGWCC	2 cut(s)	267, 1933
Eco57I	CTGAAG	1 cut(s)	1002
Eco88I	CYCGRG	2 cut(s)	115, 1465
EcoO109I	RGGNCCY	1 cut(s)	1933
EcoRII	CCWGG	4 cut(s)	597, 1003, 1194, 2045
EcoRV	GATATC	3 cut(s)	405, 555, 2182
EcoT14I	CCWWGG	3 cut(s)	136, 543, 1116
EcoT22I	ATGCAT	1 cut(s)	415
EcoT38I	GRGCYC	1 cut(s)	122
EgeI	GGCGCC	1 cut(s)	2139
EheI	GGCGCC	1 cut(s)	2139
ErhI	CCWWGG	3 cut(s)	136, 543, 1116
Esp3I	CGTCTC	1 cut(s)	318
FalI	AAGNNNNNCTT	2 cut(s)	1612, 1644
FaqI	GGGAC	1 cut(s)	2458
FauI	CCCGC	3 cut(s)	578, 642, 2095
FbaI	TGATCA	1 cut(s)	1540
FblI	GTMKAC	1 cut(s)	229
Fnu4HI	GCNGC	9 cut(s)	423, 426, 429, 978, 1072, 1097, 1113, 1666, 2298
FokI	GGATG	2 cut(s)	623, 1128
FriOI	GRGCYC	1 cut(s)	122
Fsp4HI	GCNGC	9 cut(s)	423, 426, 429, 978, 1072, 1097, 1113, 1666, 2298
FspBI	CTAG	5 cut(s)	389, 396, 558, 1583, 2354
GlaI	GCGC	2 cut(s)	81, 2139
GluI	GCNGC	9 cut(s)	423, 426, 429, 978, 1072, 1097, 1113, 1666, 2298
GsuI	CTGGAG	5 cut(s)	565, 620, 1718, 2103, 2322
HaeII	RGCGCY	1 cut(s)	2141
HaeIII	GGCC	5 cut(s)	180, 354, 629, 1115, 2045
HapII	CCGG	4 cut(s)	116, 444, 864, 1077
HgaI	GACGC	2 cut(s)	528, 2396
HhaI	GCGC	2 cut(s)	82, 2140
Hin1I	GRCGYC	3 cut(s)	539, 921, 2138
Hin6I	GCGC	2 cut(s)	80, 2138
HinP1I	GCGC	2 cut(s)	80, 2138
HindIII	AAGCTT	3 cut(s)	1253, 1814, 2315
HinfI	GANTC	3 cut(s)	440, 1187, 1399
HpaII	CCGG	4 cut(s)	116, 444, 864, 1077
HphI	GGTGA	4 cut(s)	767, 1196, 1754, 2377
Hpy166II	GTNNAC	6 cut(s)	76, 230, 267, 988, 1015, 1882
Hpy8I	GTNNAC	6 cut(s)	76, 230, 267, 988, 1015, 1882
Hpy99I	CGWCG	2 cut(s)	923, 1378
HpyAV	CCTTC	6 cut(s)	199, 682, 1614, 1709, 2084, 2435
HpyCH4IV	ACGT	2 cut(s)	921, 1995
HpyF10VI	GCNNNNNNNGC	7 cut(s)	419, 428, 569, 887, 936, 1096, 2146
HpyF3I	CTNAG	7 cut(s)	38, 149, 689, 747, 1578, 1800, 2120
HpySE526I	ACGT	2 cut(s)	921, 1995
Hsp92I	GRCGYC	3 cut(s)	539, 921, 2138
HspAI	GCGC	2 cut(s)	80, 2138
KasI	GGCGCC	1 cut(s)	2137
Kpn2I	TCCGGA	1 cut(s)	443
Ksp22I	TGATCA	1 cut(s)	1540
Kzo9I	GATC	6 cut(s)	60, 910, 1540, 1855, 2005, 2395
LguI	GCTCTTC	1 cut(s)	1080
LmnI	GCTCC	4 cut(s)	125, 878, 1634, 2099
Lsp1109I	GCAGC	7 cut(s)	412, 440, 989, 1058, 1083, 1677, 2284
LweI	GCATC	4 cut(s)	422, 572, 594, 1222
MaeI	CTAG	5 cut(s)	389, 396, 558, 1583, 2354
MaeII	ACGT	2 cut(s)	921, 1995
MaeIII	GTNAC	7 cut(s)	209, 680, 998, 1153, 1184, 1378, 2129
MalI	GATC	6 cut(s)	62, 912, 1542, 1857, 2007, 2397
MbiI	CCGCTC	1 cut(s)	2102
MboI	GATC	6 cut(s)	60, 910, 1540, 1855, 2005, 2395
MfeI	CAATTG	1 cut(s)	1207
MflI	RGATCY	2 cut(s)	910, 1855
MhlI	GDGCHC	1 cut(s)	122
MlsI	TGGCCA	1 cut(s)	2045
MluNI	TGGCCA	1 cut(s)	2045
Mly113I	GGCGCC	1 cut(s)	2138
MlyI	GAGTC	2 cut(s)	1181, 1408
MmeI	TCCRAC	2 cut(s)	1397, 2418
Mox20I	TGGCCA	1 cut(s)	2045
Mph1103I	ATGCAT	1 cut(s)	415
MroI	TCCGGA	1 cut(s)	443
MscI	TGGCCA	1 cut(s)	2045
MseI	TTAA	5 cut(s)	107, 240, 1689, 1775, 1866
MslI	CAYNNNNRTG	4 cut(s)	260, 1310, 1444, 1481
Msp20I	TGGCCA	1 cut(s)	2045
MspA1I	CMGCKG	4 cut(s)	425, 585, 980, 2119
MspI	CCGG	4 cut(s)	116, 444, 864, 1077
MspR9I	CCNGG	6 cut(s)	116, 117, 599, 1005, 1196, 2047
MunI	CAATTG	1 cut(s)	1207
Mva1269I	GAATGC	2 cut(s)	1439, 2161
MvaI	CCWGG	4 cut(s)	599, 1005, 1196, 2047
MvnI	CGCG	1 cut(s)	80
MwoI	GCNNNNNNNGC	7 cut(s)	419, 428, 569, 887, 936, 1096, 2146
NarI	GGCGCC	1 cut(s)	2138
NciI	CCSGG	2 cut(s)	116, 117
NcoI	CCATGG	2 cut(s)	136, 543
NdeII	GATC	6 cut(s)	60, 910, 1540, 1855, 2005, 2395
NlaIV	GGNNCC	6 cut(s)	121, 1432, 1651, 1934, 2055, 2139
NmuCI	GTSAC	2 cut(s)	1153, 1184
NsiI	ATGCAT	1 cut(s)	415
NspI	RCATGY	1 cut(s)	1486
OliI	CACNNNNGTG	1 cut(s)	260
PaeR7I	CTCGAG	1 cut(s)	1465
PagI	TCATGA	1 cut(s)	2415
PciSI	GCTCTTC	1 cut(s)	1080
PctI	GAATGC	2 cut(s)	1439, 2161
PfeI	GAWTC	1 cut(s)	440
PkrI	GCNGC	9 cut(s)	424, 427, 430, 979, 1073, 1098, 1114, 1667, 2299
PleI	GAGTC	2 cut(s)	1181, 1407
PluTI	GGCGCC	1 cut(s)	2141
PpsI	GAGTC	2 cut(s)	1181, 1407
PpuMI	RGGWCCY	1 cut(s)	1933
PsiI	TTATAA	1 cut(s)	1644
Psp5II	RGGWCCY	1 cut(s)	1933
Psp6I	CCWGG	4 cut(s)	597, 1003, 1194, 2045
PspGI	CCWGG	4 cut(s)	597, 1003, 1194, 2045
PspN4I	GGNNCC	6 cut(s)	121, 1432, 1651, 1934, 2055, 2139
PspPI	GGNCC	2 cut(s)	267, 1933
PspPPI	RGGWCCY	1 cut(s)	1933
PsrI	GAACNNNNNNTAC	2 cut(s)	1789, 1821
PstI	CTGCAG	1 cut(s)	430
PstNI	CAGNNNCTG	1 cut(s)	1235
PsuI	RGATCY	2 cut(s)	910, 1855
PvuII	CAGCTG	2 cut(s)	980, 2119
RseI	CAYNNNNRTG	4 cut(s)	260, 1310, 1444, 1481
SapI	GCTCTTC	1 cut(s)	1080
SaqAI	TTAA	5 cut(s)	107, 240, 1689, 1775, 1866
SatI	GCNGC	9 cut(s)	423, 426, 429, 978, 1072, 1097, 1113, 1666, 2298
Sau3AI	GATC	6 cut(s)	60, 910, 1540, 1855, 2005, 2395
Sau96I	GGNCC	2 cut(s)	267, 1933
ScaI	AGTACT	2 cut(s)	43, 1550
SchI	GAGTC	2 cut(s)	1181, 1408
ScrFI	CCNGG	6 cut(s)	116, 117, 599, 1005, 1196, 2047
SduI	GDGCHC	1 cut(s)	122
SfaNI	GCATC	4 cut(s)	422, 572, 594, 1222
SfcI	CTRYAG	3 cut(s)	426, 1062, 2185
SfoI	GGCGCC	1 cut(s)	2139
Sfr274I	CTCGAG	1 cut(s)	1465
SinI	GGWCC	2 cut(s)	267, 1933
SlaI	CTCGAG	1 cut(s)	1465
SmaI	CCCGGG	1 cut(s)	117
SmiMI	CAYNNNNRTG	4 cut(s)	260, 1310, 1444, 1481
SmlI	CTYRAG	1 cut(s)	1465
SmoI	CTYRAG	1 cut(s)	1465
SpeI	ACTAGT	1 cut(s)	395
SrfI	GCCCGGGC	1 cut(s)	117
SspDI	GGCGCC	1 cut(s)	2137
SspMI	CTAG	5 cut(s)	389, 396, 558, 1583, 2354
StyD4I	CCNGG	6 cut(s)	114, 115, 597, 1003, 1194, 2045
StyI	CCWWGG	3 cut(s)	136, 543, 1116
TaiI	ACGT	2 cut(s)	924, 1998
TaqI	TCGA	7 cut(s)	59, 277, 822, 1466, 1523, 2112, 2273
TaqII	GACCGA	1 cut(s)	330
TatI	WGTACW	5 cut(s)	19, 41, 840, 1548, 1796
TauI	GCSGC	2 cut(s)	425, 1115
TfiI	GAWTC	1 cut(s)	440
Tru1I	TTAA	5 cut(s)	107, 240, 1689, 1775, 1866
Tru9I	TTAA	5 cut(s)	107, 240, 1689, 1775, 1866
TscAI	CASTG	6 cut(s)	315, 739, 995, 1066, 1158, 1963
TseFI	GTSAC	2 cut(s)	1153, 1184
TseI	GCWGC	7 cut(s)	425, 428, 977, 1071, 1096, 1665, 2297
Tsp45I	GTSAC	2 cut(s)	1153, 1184
TspGWI	ACGGA	1 cut(s)	1648
TspMI	CCCGGG	1 cut(s)	115
TspRI	CASTG	6 cut(s)	315, 739, 995, 1066, 1158, 1963
VpaK11BI	GGWCC	2 cut(s)	267, 1933
XapI	RAATTY	2 cut(s)	382, 1727
XceI	RCATGY	1 cut(s)	1486
XhoI	CTCGAG	1 cut(s)	1465
XmaI	CCCGGG	1 cut(s)	115
XmiI	GTMKAC	1 cut(s)	229
XspI	CTAG	5 cut(s)	389, 396, 558, 1583, 2354
ZraI	GACGTC	1 cut(s)	922
ZrmI	AGTACT	2 cut(s)	43, 1550
Zsp2I	ATGCAT	1 cut(s)	415

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.