Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001814.1

Orthogroup ID

OG0003934

Physical Location & Seq

Genomic Coordinates Reverse (-)

178018 .. 180444

Gene Structure 2427 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001814.1_g000032.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2427 bp

atgcccaatgtaaaagctcaaagaaaccactccaaatccaatttaatcagcctgggctcctctctatcccccaatgttgataacctcagtatttcttcatggttgtcatcttctggccgtttcgccttcggtttctacccacaaggcaacggctttgctgttggtatacggcttcttaatccaccaaacaacacagttgtgtggactgcaaatcgagattacccccctgtctcctcaaactctacactgaaacttacaggagacggtctctcgcttcggtcagagggaggccaagaaatacctattgctaatggctcaagtttactagaaactagtgcgatatcaaatgcatcgactgccgctgcagctatgcttgattccggaaacttcgtgctgtataatgagactttttttgttatatggaagagctttggtttcccaactgatacaatactgggaggccaagatttggaggcagacatgggtctggtatctagtgcatctgttgcagaccactccagcgggcgattttccctgaagatgcggactgatggaaaccttgtggcctacccgccaagcagttcttctgcttattgggctactatgactgaggctagcagccttagtctcaacctatcaggctttctcgttttgaatagccaatccagtgatctgattgctcaggtcttggcaaacggctcgtatcatcacccacaagacaatcaaaccacaatctaccgagcaacgcttgatgtcgacgggaatttcagattgtacttgcatgactttctgatgtccggtagttcagagccagctgtaaaggctatttggtcagctttgcaagatccatgcgacgtcaaaggcatttgtggcttcaacagttattgtgaagtagtcatgaaaaagaaagcagatgaagttgagtgcaaatgttaccctgaatttgtttacaacaatgccagtcagaagtctctggggtgttatcataatttcactgtagacggctgcaccggaaatgaagagccacggctgcggtacaaggtagaggccttggacaatacatcgtggaataatcatccttattcagtgacacctattcaaaacaaggaagattgcggtgactcttgcctggaagactgcaattgttgggctgcactatatacaggtgctgattgcagaaaatacaagcttccacttttatatggcaaaacaacttcaaatatatccacgggtttcttcaaagtgcttctaccgataaatatggatggcatgccaaacaattttcccgaactaactgaaagcctgacggtaactgaaagcaagaataatagtctaattctaattcttgccatcactctgggttccattgcattcttgtgttttgtccttgccatctcgagtttcaccatatacaagcaccgagttcataggtacgagaagcttttgaagcattcgagtttggcattagctgatcaagagtacttcactttacaatcgttttcttatgctgtgctcgaaagagcaacagatggcttcaaggaagagataggaaggggtactttcggagctgtttataaaggaactctgtccggggccagctctaacaaaactgttgctgttaaaagactggagaaagtggttgatgaaggagtaagggaatttatagctgaaattaccaccattggacggactcaccacagaaacttagttcagttgcttggtttctgtattgagggttctcggaagcttcttgtttatgaatacatgagcaacggctcacttgcggatcttatctttaagaccaaaagtgtgcactcatcttggaaagaaagggtaagacttgtattcgatgtggctaaaggggtcctctatttacatgacgaatgcagtgtccatatcattcactccaatttgaaaccccaaaacgtactcttggatcatacttggacggctaagatatctgatttcggtttggccaggctggtgccaaatgaaacaaaaatcaactctactggaggaggagaaggaggagcgggaacagtcgaacaggtgagaagaggttacttggcgcctgaatggcagaagaatgctttcatatctgtaaaagctgatatctacagttttggtattgtgcttttagagattgtatgttgtagaagaaacatagaagtaaatgtttcaacaccagatgagataattctttcgagttgggtcagtaaatgctttgctgctggagaattagataagcttgtggaggaagatgaaaatgcagatttgaagaccctagaaagaatggtgaaagtggggttttggtgcgttcaagatgatccagctttgcgtcctttcatgaagaatgtaatcttgatgttggaagggacaatggacataccagttccaccatgtccagagcttccctctcttgtttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

B_lectin PAN_2 Pkinase Pkinase_Tyr S_locus_glycop

Protein Analysis

808

Amino Acids

88.89

Weight (kDa)

5.73

Isoelectric Point (pI)

35.4

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003934)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g23390
prunus_persica	Prupe.6G165100_v2.0.a1 Prupe.6G165400_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0118681 RchiOBHm_Chr2g0118741 RchiOBHm_Chr2g0118761
rosa_laevigata	RLG00000018419
rosa_multiflora	Rmu_co8322353.1_g000001 Rmu_sc0001814.1_g000026 Rmu_sc0001814.1_g000032 Rmu_sc0002700.1_g000009 Rmu_sc0002700.1_g000033 Rmu_sc0002700.1_g000035 Rmu_sc0002831.1_g000014 Rmu_sc0002831.1_g000017 Rmu_sc0002831.1_g000031 Rmu_sc0004399.1_g000001
rosa_roxburghii	Rroxscaffold_2G00124760 Rroxscaffold_2G00124850 Rroxscaffold_2G00124890 Rroxscaffold_2G00125410 Rroxscaffold_2G00125420
rosa_rugosa	Rorug02G0218400
rosa_samantha	Rh2AG274700 Rh2AG275000 Rh2AG275300 Rh2BG286500 Rh2BG286700 Rh2BG287100 Rh2DG301500 Rh2DG301700
rosa_wichuraiana	Rw2G021850 Rw2G021890 Rw2G021930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1575
AatII	GACGTC	1 cut(s)	858
AccB1I	GGYRCC	2 cut(s)	1984, 2068
AccB7I	CCANNNNNTGG	1 cut(s)	469
AccBSI	CCGCTC	1 cut(s)	2033
AccI	GTMKAC	3 cut(s)	166, 756, 999
AccIII	TCCGGA	1 cut(s)	380
AciI	CCGC	8 cut(s)	360, 522, 544, 572, 1033, 1116, 1784, 2033
AclWI	GGATC	4 cut(s)	839, 1794, 1944, 2321
AcoI	YGGCCR	2 cut(s)	115, 1974
AcsI	RAATTY	3 cut(s)	763, 941, 1658
AcuI	CTGAAG	1 cut(s)	557
AcyI	GRCGYC	2 cut(s)	855, 2069
AfaI	GTAC	6 cut(s)	776, 1037, 1433, 1481, 1558, 1929
AfiI	CCNNNNNNNGG	2 cut(s)	469, 1686
AhlI	ACTAGT	1 cut(s)	332
AjnI	CCWGG	3 cut(s)	51, 1128, 1976
AjuI	GAANNNNNNNTTGG	2 cut(s)	568, 600
AleI	CACNNNNGTG	1 cut(s)	197
Alw21I	GWGCWC	2 cut(s)	1515, 1815
Alw26I	GTCTC	6 cut(s)	235, 255, 272, 398, 632, 975
Alw44I	GTGCAC	1 cut(s)	1811
AlwI	GGATC	4 cut(s)	839, 1794, 1944, 2321
AlwNI	CAGNNNCTG	1 cut(s)	1169
Ama87I	CYCGRG	1 cut(s)	1396
Aor13HI	TCCGGA	1 cut(s)	380
AoxI	GGCC	7 cut(s)	115, 289, 460, 564, 1047, 1593, 1974
ApaLI	GTGCAC	1 cut(s)	1811
ApeKI	GCWGC	7 cut(s)	362, 365, 618, 1005, 1030, 1151, 2228
ApoI	RAATTY	3 cut(s)	763, 941, 1658
ArsI	GACNNNNNNTTYG	2 cut(s)	1875, 1907
Asp700I	GAANNNNTTC	1 cut(s)	2090
AspLEI	GCGC	1 cut(s)	2071
AspS9I	GGNCC	2 cut(s)	1593, 1864
AsuC2I	CCSGG	1 cut(s)	1591
AsuHPI	GGTGA	6 cut(s)	701, 1130, 1396, 1685, 2062, 2308
AsuNHI	GCTAGC	1 cut(s)	614
AvaI	CYCGRG	1 cut(s)	1396
AvaII	GGWCC	1 cut(s)	1864
BaeGI	GKGCMC	1 cut(s)	1815
BalI	TGGCCA	1 cut(s)	1976
BanI	GGYRCC	2 cut(s)	1984, 2068
BanII	GRGCYC	1 cut(s)	59
BbsI	GAAGAC	2 cut(s)	1140, 2285
Bbv12I	GWGCWC	2 cut(s)	1515, 1815
BbvI	GCAGC	7 cut(s)	349, 377, 630, 992, 1017, 1138, 2215
BccI	CCATC	5 cut(s)	545, 1259, 1358, 1400, 1523
BceAI	ACGGC	8 cut(s)	102, 166, 185, 712, 1018, 1043, 1789, 1965
BcgI	CGANNNNNNTGC	2 cut(s)	681, 715
BciT130I	CCWGG	3 cut(s)	53, 1130, 1978
BclI	TGATCA	1 cut(s)	1471
BcnI	CCSGG	1 cut(s)	1591
BcoDI	GTCTC	6 cut(s)	235, 255, 272, 398, 632, 975
BcuI	ACTAGT	1 cut(s)	332
BfaI	CTAG	5 cut(s)	326, 333, 495, 615, 2285
BfmI	CTRYAG	3 cut(s)	363, 996, 2116
BfoI	RGCGCY	1 cut(s)	2072
BglI	GCCNNNNNGGC	1 cut(s)	2077
BisI	GCNGC	8 cut(s)	360, 363, 366, 619, 1006, 1031, 1152, 2229
BlsI	GCNGC	8 cut(s)	361, 364, 367, 620, 1007, 1032, 1153, 2230
BmcAI	AGTACT	1 cut(s)	1481
Bme1390I	CCNGG	4 cut(s)	53, 1130, 1591, 1978
Bme18I	GGWCC	1 cut(s)	1864
BmeT110I	CYCGRG	1 cut(s)	1396
BmgT120I	GGNCC	2 cut(s)	1593, 1864
BmiI	GGNNCC	6 cut(s)	58, 1363, 1594, 1865, 1986, 2070
BmrFI	CCNGG	4 cut(s)	53, 1130, 1591, 1978
BmrI	ACTGGG	1 cut(s)	464
BmsI	GCATC	3 cut(s)	359, 509, 531
BmtI	GCTAGC	1 cut(s)	618
BmuI	ACTGGG	1 cut(s)	464
BoxI	GACNNNNGTC	1 cut(s)	483
BpiI	GAAGAC	2 cut(s)	1140, 2285
BplI	GAGNNNNNCTC	3 cut(s)	252, 284, 2399
BpmI	CTGGAG	4 cut(s)	502, 1649, 2034, 2253
Bpu10I	CCTNAGC	1 cut(s)	681
BpuEI	CTTGAG	1 cut(s)	301
BpuMI	CCSGG	1 cut(s)	1591
BsaHI	GRCGYC	2 cut(s)	855, 2069
BsaI	GGTCTC	1 cut(s)	272
BsaJI	CCNNGG	5 cut(s)	52, 1025, 1050, 1227, 1590
BsaWI	WCCGGW	3 cut(s)	380, 797, 1010
Bsc4I	CCNNNNNNNGG	2 cut(s)	469, 1686
Bse1I	ACTGG	6 cut(s)	459, 666, 960, 1632, 2017, 2390
Bse3DI	GCAATG	1 cut(s)	1365
BseAI	TCCGGA	1 cut(s)	380
BseBI	CCWGG	3 cut(s)	53, 1130, 1978
BseDI	CCNNGG	5 cut(s)	52, 1025, 1050, 1227, 1590
BseGI	GGATG	2 cut(s)	1075, 1270
BseLI	CCNNNNNNNGG	2 cut(s)	469, 1686
BseMI	GCAATG	1 cut(s)	1365
BseMII	CTCAG	3 cut(s)	100, 600, 695
BseNI	ACTGG	6 cut(s)	459, 666, 960, 1632, 2017, 2390
BseRI	GAGGAG	5 cut(s)	49, 223, 2031, 2034, 2043
BseSI	GKGCMC	1 cut(s)	1815
BseXI	GCAGC	7 cut(s)	349, 377, 630, 992, 1017, 1138, 2215
BsgI	GTGCAG	2 cut(s)	991, 1137
BshFI	GGCC	7 cut(s)	117, 291, 462, 566, 1049, 1595, 1976
BshNI	GGYRCC	2 cut(s)	1984, 2068
BsiHKAI	GWGCWC	2 cut(s)	1515, 1815
BsiHKCI	CYCGRG	1 cut(s)	1396
BsiSI	CCGG	4 cut(s)	381, 798, 1011, 1590
BslFI	GGGAC	1 cut(s)	2389
BslI	CCNNNNNNNGG	2 cut(s)	469, 1686
BsmAI	GTCTC	6 cut(s)	235, 255, 272, 398, 632, 975
BsmBI	CGTCTC	1 cut(s)	255
BsmFI	GGGAC	1 cut(s)	2389
BsmI	GAATGC	4 cut(s)	1370, 1450, 1889, 2092
BsnI	GGCC	7 cut(s)	117, 291, 462, 566, 1049, 1595, 1976
Bso31I	GGTCTC	1 cut(s)	272
BsoBI	CYCGRG	1 cut(s)	1396
Bsp1286I	GDGCHC	3 cut(s)	59, 1515, 1815
Bsp13I	TCCGGA	1 cut(s)	380
Bsp143I	GATC	6 cut(s)	670, 844, 1471, 1786, 1936, 2326
BspACI	CCGC	8 cut(s)	360, 522, 544, 572, 1033, 1116, 1784, 2033
BspANI	GGCC	7 cut(s)	117, 291, 462, 566, 1049, 1595, 1976
BspCNI	CTCAG	3 cut(s)	99, 601, 694
BspEI	TCCGGA	1 cut(s)	380
BspHI	TCATGA	2 cut(s)	897, 2346
BspLI	GGNNCC	6 cut(s)	58, 1363, 1594, 1865, 1986, 2070
BspMAI	CTGCAG	1 cut(s)	367
BspOI	GCTAGC	1 cut(s)	618
BspPI	GGATC	4 cut(s)	839, 1794, 1944, 2321
BspQI	GCTCTTC	2 cut(s)	419, 1014
BspT107I	GGYRCC	2 cut(s)	1984, 2068
BspTNI	GGTCTC	1 cut(s)	272
BsrBI	CCGCTC	1 cut(s)	2033
BsrDI	GCAATG	1 cut(s)	1365
BsrI	ACTGG	6 cut(s)	459, 666, 960, 1632, 2017, 2390
BssECI	CCNNGG	5 cut(s)	52, 1025, 1050, 1227, 1590
BssMI	GATC	6 cut(s)	670, 844, 1471, 1786, 1936, 2326
BssNAI	GTATAC	1 cut(s)	167
BssNI	GRCGYC	2 cut(s)	855, 2069
BssT1I	CCWWGG	1 cut(s)	1050
Bst1107I	GTATAC	1 cut(s)	167
Bst2UI	CCWGG	3 cut(s)	53, 1130, 1978
Bst4CI	ACNGT	8 cut(s)	196, 266, 881, 997, 1309, 1612, 2041, 2120
Bst6I	CTCTTC	4 cut(s)	419, 1014, 1536, 2050
BstACI	GRCGYC	2 cut(s)	855, 2069
BstAPI	GCANNNNNTGC	2 cut(s)	356, 506
BstC8I	GCNNGC	5 cut(s)	524, 616, 813, 1271, 1597
BstDEI	CTNAG	6 cut(s)	86, 609, 623, 681, 1705, 1953
BstDSI	CCRYGG	2 cut(s)	1025, 1227
BstF5I	GGATG	2 cut(s)	1075, 1270
BstH2I	RGCGCY	1 cut(s)	2072
BstHHI	GCGC	1 cut(s)	2071
BstKTI	GATC	6 cut(s)	673, 847, 1474, 1789, 1939, 2329
BstMAI	GTCTC	6 cut(s)	235, 255, 272, 398, 632, 975
BstMBI	GATC	6 cut(s)	670, 844, 1471, 1786, 1936, 2326
BstMWI	GCNNNNNNNGC	9 cut(s)	356, 365, 506, 596, 821, 870, 1030, 1447, 2077
BstNI	CCWGG	3 cut(s)	53, 1130, 1978
BstNSI	RCATGY	1 cut(s)	1273
BstPAI	GACNNNNGTC	1 cut(s)	483
BstSCI	CCNGG	4 cut(s)	51, 1128, 1589, 1976
BstSFI	CTRYAG	3 cut(s)	363, 996, 2116
BstSLI	GKGCMC	1 cut(s)	1815
BstV1I	GCAGC	7 cut(s)	349, 377, 630, 992, 1017, 1138, 2215
BstV2I	GAAGAC	2 cut(s)	1140, 2285
BstX2I	RGATCY	2 cut(s)	844, 1786
BstXI	CCANNNNNNTGG	1 cut(s)	1357
BstYI	RGATCY	2 cut(s)	844, 1786
BstZ17I	GTATAC	1 cut(s)	167
BsuRI	GGCC	7 cut(s)	117, 291, 462, 566, 1049, 1595, 1976
BtgI	CCRYGG	2 cut(s)	1025, 1227
BtsCI	GGATG	2 cut(s)	1075, 1270
BtsI	GCAGTG	1 cut(s)	1894
BtsIMutI	CAGTG	5 cut(s)	245, 673, 993, 1092, 1894
Cac8I	GCNNGC	5 cut(s)	524, 616, 813, 1271, 1597
CaiI	CAGNNNCTG	1 cut(s)	1169
CciI	TCATGA	2 cut(s)	897, 2346
CfoI	GCGC	1 cut(s)	2071
Cfr13I	GGNCC	2 cut(s)	1593, 1864
CseI	GACGC	1 cut(s)	2327
Csp6I	GTAC	6 cut(s)	775, 1036, 1432, 1480, 1557, 1928
CviQI	GTAC	6 cut(s)	775, 1036, 1432, 1480, 1557, 1928
DdeI	CTNAG	6 cut(s)	86, 609, 623, 681, 1705, 1953
DinI	GGCGCC	1 cut(s)	2070
DpnI	GATC	6 cut(s)	672, 846, 1473, 1788, 1938, 2328
DpnII	GATC	6 cut(s)	670, 844, 1471, 1786, 1936, 2326
EaeI	YGGCCR	2 cut(s)	115, 1974
Eam1104I	CTCTTC	4 cut(s)	419, 1014, 1536, 2050
EarI	CTCTTC	4 cut(s)	419, 1014, 1536, 2050
Eco130I	CCWWGG	1 cut(s)	1050
Eco147I	AGGCCT	1 cut(s)	1049
Eco24I	GRGCYC	1 cut(s)	59
Eco31I	GGTCTC	1 cut(s)	272
Eco32I	GATATC	3 cut(s)	342, 1959, 2113
Eco47I	GGWCC	1 cut(s)	1864
Eco57I	CTGAAG	1 cut(s)	557
Eco88I	CYCGRG	1 cut(s)	1396
EcoO109I	RGGNCCY	1 cut(s)	1864
EcoRII	CCWGG	3 cut(s)	51, 1128, 1976
EcoRV	GATATC	3 cut(s)	342, 1959, 2113
EcoT14I	CCWWGG	1 cut(s)	1050
EcoT22I	ATGCAT	1 cut(s)	352
EcoT38I	GRGCYC	1 cut(s)	59
EgeI	GGCGCC	1 cut(s)	2070
EheI	GGCGCC	1 cut(s)	2070
ErhI	CCWWGG	1 cut(s)	1050
Esp3I	CGTCTC	1 cut(s)	255
FalI	AAGNNNNNCTT	4 cut(s)	568, 600, 1543, 1575
FaqI	GGGAC	1 cut(s)	2389
FauI	CCCGC	3 cut(s)	515, 579, 2026
FbaI	TGATCA	1 cut(s)	1471
FblI	GTMKAC	3 cut(s)	166, 756, 999
Fnu4HI	GCNGC	8 cut(s)	360, 363, 366, 619, 1006, 1031, 1152, 2229
FokI	GGATG	2 cut(s)	1062, 1277
FriOI	GRGCYC	1 cut(s)	59
Fsp4HI	GCNGC	8 cut(s)	360, 363, 366, 619, 1006, 1031, 1152, 2229
FspBI	CTAG	5 cut(s)	326, 333, 495, 615, 2285
GlaI	GCGC	1 cut(s)	2070
GluI	GCNGC	8 cut(s)	360, 363, 366, 619, 1006, 1031, 1152, 2229
GsuI	CTGGAG	4 cut(s)	502, 1649, 2034, 2253
HaeII	RGCGCY	1 cut(s)	2072
HaeIII	GGCC	7 cut(s)	117, 291, 462, 566, 1049, 1595, 1976
HapII	CCGG	4 cut(s)	381, 798, 1011, 1590
HgaI	GACGC	1 cut(s)	2327
HhaI	GCGC	1 cut(s)	2071
Hin1I	GRCGYC	2 cut(s)	855, 2069
Hin6I	GCGC	1 cut(s)	2069
HinP1I	GCGC	1 cut(s)	2069
HincII	GTYRAC	1 cut(s)	757
HindII	GTYRAC	1 cut(s)	757
HindIII	AAGCTT	4 cut(s)	1187, 1439, 1745, 2246
HinfI	GANTC	3 cut(s)	377, 1121, 1690
HpaII	CCGG	4 cut(s)	381, 798, 1011, 1590
HphI	GGTGA	6 cut(s)	701, 1130, 1396, 1685, 2062, 2308
Hpy166II	GTNNAC	7 cut(s)	167, 204, 323, 757, 949, 1000, 1813
Hpy188I	TCNGA	9 cut(s)	283, 675, 770, 792, 808, 966, 1565, 1743, 1963
Hpy8I	GTNNAC	7 cut(s)	167, 204, 323, 757, 949, 1000, 1813
Hpy99I	CGWCG	2 cut(s)	761, 857
HpyAV	CCTTC	5 cut(s)	136, 1545, 1640, 2018, 2366
HpyCH4III	ACNGT	8 cut(s)	196, 266, 881, 997, 1309, 1612, 2041, 2120
HpyCH4IV	ACGT	2 cut(s)	855, 1926
HpyF10VI	GCNNNNNNNGC	9 cut(s)	356, 365, 506, 596, 821, 870, 1030, 1447, 2077
HpyF3I	CTNAG	6 cut(s)	86, 609, 623, 681, 1705, 1953
HpySE526I	ACGT	2 cut(s)	855, 1926
Hsp92I	GRCGYC	2 cut(s)	855, 2069
HspAI	GCGC	1 cut(s)	2069
KasI	GGCGCC	1 cut(s)	2068
Kpn2I	TCCGGA	1 cut(s)	380
Ksp22I	TGATCA	1 cut(s)	1471
Kzo9I	GATC	6 cut(s)	670, 844, 1471, 1786, 1936, 2326
LguI	GCTCTTC	2 cut(s)	419, 1014
LmnI	GCTCC	3 cut(s)	62, 1565, 2030
Lsp1109I	GCAGC	7 cut(s)	349, 377, 630, 992, 1017, 1138, 2215
LweI	GCATC	3 cut(s)	359, 509, 531
MaeI	CTAG	5 cut(s)	326, 333, 495, 615, 2285
MaeII	ACGT	2 cut(s)	855, 1926
MaeIII	GTNAC	5 cut(s)	932, 1087, 1118, 1309, 2060
MalI	GATC	6 cut(s)	672, 846, 1473, 1788, 1938, 2328
MbiI	CCGCTC	1 cut(s)	2033
MboI	GATC	6 cut(s)	670, 844, 1471, 1786, 1936, 2326
MfeI	CAATTG	1 cut(s)	1141
MflI	RGATCY	2 cut(s)	844, 1786
MhlI	GDGCHC	3 cut(s)	59, 1515, 1815
MlsI	TGGCCA	1 cut(s)	1976
MluNI	TGGCCA	1 cut(s)	1976
Mly113I	GGCGCC	1 cut(s)	2069
MlyI	GAGTC	2 cut(s)	1115, 1684
MmeI	TCCRAC	1 cut(s)	2349
Mox20I	TGGCCA	1 cut(s)	1976
Mph1103I	ATGCAT	1 cut(s)	352
MroI	TCCGGA	1 cut(s)	380
MroXI	GAANNNNTTC	1 cut(s)	2090
MscI	TGGCCA	1 cut(s)	1976
MseI	TTAA	4 cut(s)	44, 177, 1620, 1797
MslI	CAYNNNNRTG	2 cut(s)	197, 1375
Msp20I	TGGCCA	1 cut(s)	1976
MspA1I	CMGCKG	3 cut(s)	362, 522, 815
MspI	CCGG	4 cut(s)	381, 798, 1011, 1590
MspR9I	CCNGG	4 cut(s)	53, 1130, 1591, 1978
MunI	CAATTG	1 cut(s)	1141
Mva1269I	GAATGC	4 cut(s)	1370, 1450, 1889, 2092
MvaI	CCWGG	3 cut(s)	53, 1130, 1978
MwoI	GCNNNNNNNGC	9 cut(s)	356, 365, 506, 596, 821, 870, 1030, 1447, 2077
NarI	GGCGCC	1 cut(s)	2069
NciI	CCSGG	1 cut(s)	1591
NdeII	GATC	6 cut(s)	670, 844, 1471, 1786, 1936, 2326
NheI	GCTAGC	1 cut(s)	614
NlaIV	GGNNCC	6 cut(s)	58, 1363, 1594, 1865, 1986, 2070
NmuCI	GTSAC	2 cut(s)	1087, 1118
NsiI	ATGCAT	1 cut(s)	352
NspI	RCATGY	1 cut(s)	1273
OliI	CACNNNNGTG	1 cut(s)	197
PaeI	GCATGC	1 cut(s)	1273
PaeR7I	CTCGAG	1 cut(s)	1396
PagI	TCATGA	2 cut(s)	897, 2346
PceI	AGGCCT	1 cut(s)	1049
PciSI	GCTCTTC	2 cut(s)	419, 1014
PctI	GAATGC	4 cut(s)	1370, 1450, 1889, 2092
PdmI	GAANNNNTTC	1 cut(s)	2090
PfeI	GAWTC	1 cut(s)	377
PflMI	CCANNNNNTGG	1 cut(s)	469
PkrI	GCNGC	8 cut(s)	361, 364, 367, 620, 1007, 1032, 1153, 2230
PleI	GAGTC	2 cut(s)	1115, 1684
PluTI	GGCGCC	1 cut(s)	2072
PpsI	GAGTC	2 cut(s)	1115, 1684
PpuMI	RGGWCCY	1 cut(s)	1864
PshAI	GACNNNNGTC	1 cut(s)	483
PsiI	TTATAA	1 cut(s)	1575
Psp5II	RGGWCCY	1 cut(s)	1864
Psp6I	CCWGG	3 cut(s)	51, 1128, 1976
PspGI	CCWGG	3 cut(s)	51, 1128, 1976
PspN4I	GGNNCC	6 cut(s)	58, 1363, 1594, 1865, 1986, 2070
PspPI	GGNCC	2 cut(s)	1593, 1864
PspPPI	RGGWCCY	1 cut(s)	1864
PsrI	GAACNNNNNNTAC	2 cut(s)	1720, 1752
PstI	CTGCAG	1 cut(s)	367
PstNI	CAGNNNCTG	1 cut(s)	1169
PsuI	RGATCY	2 cut(s)	844, 1786
PvuII	CAGCTG	1 cut(s)	815
RsaI	GTAC	6 cut(s)	776, 1037, 1433, 1481, 1558, 1929
RsaNI	GTAC	6 cut(s)	775, 1036, 1432, 1480, 1557, 1928
RseI	CAYNNNNRTG	2 cut(s)	197, 1375
SalI	GTCGAC	1 cut(s)	755
SapI	GCTCTTC	2 cut(s)	419, 1014
SaqAI	TTAA	4 cut(s)	44, 177, 1620, 1797
SatI	GCNGC	8 cut(s)	360, 363, 366, 619, 1006, 1031, 1152, 2229
Sau3AI	GATC	6 cut(s)	670, 844, 1471, 1786, 1936, 2326
Sau96I	GGNCC	2 cut(s)	1593, 1864
ScaI	AGTACT	1 cut(s)	1481
SchI	GAGTC	2 cut(s)	1115, 1684
ScrFI	CCNGG	4 cut(s)	53, 1130, 1591, 1978
SduI	GDGCHC	3 cut(s)	59, 1515, 1815
SfaNI	GCATC	3 cut(s)	359, 509, 531
SfcI	CTRYAG	3 cut(s)	363, 996, 2116
SfoI	GGCGCC	1 cut(s)	2070
Sfr274I	CTCGAG	1 cut(s)	1396
SinI	GGWCC	1 cut(s)	1864
SlaI	CTCGAG	1 cut(s)	1396
SmiMI	CAYNNNNRTG	2 cut(s)	197, 1375
SmlI	CTYRAG	2 cut(s)	316, 1396
SmoI	CTYRAG	2 cut(s)	316, 1396
SpeI	ACTAGT	1 cut(s)	332
SphI	GCATGC	1 cut(s)	1273
SseBI	AGGCCT	1 cut(s)	1049
SsiI	CCGC	8 cut(s)	360, 522, 544, 572, 1033, 1116, 1784, 2033
SspDI	GGCGCC	1 cut(s)	2068
SspMI	CTAG	5 cut(s)	326, 333, 495, 615, 2285
StuI	AGGCCT	1 cut(s)	1049
StyD4I	CCNGG	4 cut(s)	51, 1128, 1589, 1976
StyI	CCWWGG	1 cut(s)	1050
TaaI	ACNGT	8 cut(s)	196, 266, 881, 997, 1309, 1612, 2041, 2120
TaiI	ACGT	2 cut(s)	858, 1929
TaqI	TCGA	9 cut(s)	214, 353, 756, 1397, 1454, 1515, 1848, 2043, 2204
TaqII	GACCGA	1 cut(s)	267
TatI	WGTACW	2 cut(s)	774, 1479
TauI	GCSGC	1 cut(s)	362
TfiI	GAWTC	1 cut(s)	377
Tru1I	TTAA	4 cut(s)	44, 177, 1620, 1797
Tru9I	TTAA	4 cut(s)	44, 177, 1620, 1797
TscAI	CASTG	5 cut(s)	252, 673, 1000, 1092, 1894
TseFI	GTSAC	2 cut(s)	1087, 1118
TseI	GCWGC	7 cut(s)	362, 365, 618, 1005, 1030, 1151, 2228
Tsp45I	GTSAC	2 cut(s)	1087, 1118
TspGWI	ACGGA	1 cut(s)	1702
TspRI	CASTG	5 cut(s)	252, 673, 1000, 1092, 1894
Van91I	CCANNNNNTGG	1 cut(s)	469
VneI	GTGCAC	1 cut(s)	1811
VpaK11BI	GGWCC	1 cut(s)	1864
XapI	RAATTY	3 cut(s)	763, 941, 1658
XceI	RCATGY	1 cut(s)	1273
XhoI	CTCGAG	1 cut(s)	1396
XmiI	GTMKAC	3 cut(s)	166, 756, 999
XmnI	GAANNNNTTC	1 cut(s)	2090
XspI	CTAG	5 cut(s)	326, 333, 495, 615, 2285
ZraI	GACGTC	1 cut(s)	856
ZrmI	AGTACT	1 cut(s)	1481
Zsp2I	ATGCAT	1 cut(s)	352

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.