Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001814.1

Orthogroup ID

OG0003934

Physical Location & Seq

Genomic Coordinates Reverse (-)

143601 .. 148681

Gene Structure 5081 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001814.1_g000026.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2631 bp

atgcccaatgtaaaagctcaaagaaaccactccaaatccaatttaatcagcctgggctcctctctatcccccaatgttgataccctcagtatttcttcatggtggtcatcttctggccgtttcgccttcggtttctacccacaaggcaacggctttgctgttggtatacagcttcttaatccaccaaacaacacagttgtatggactgcaaatcgagattacccccctgtctcctcaaactctacactgaaacttacaggagacggtctctcgcttcggtcagagggaggccaagaaatacctattgctaatggctcaagtttaatagaaactagtgcgatatcaaatgcatcgactgccgctgcagctatgcttgattccggaaactttgtgctgtataatgagactttttttgttatatgggagagctttgatttcccaactgatacaatactgggaggccaagatttggaggcagacatggccttggtatctagtgcatctgctacagaccactccagcgggcgattttccctggagatgcaggctgatggaaaccttgtagcctaccggctaaacggtcattttgcttattgggctgctataaccgatactagaagttaccaacttagtctcaacctatcaggctttctcgttttgaacaaccaatccagtggtctgagtactcgggtcttggcaaacggctcgtaccatcacccacaagacaatcaaaccacaatctaccgagcaacacttgatgtctatgggattttcagattgtacttgcataactttctgatgtccggtagttcagagggagctgtaatggctatttggtcagctttgcaaggtccatgcgacctcaaaggcatttgtggcttcaacagttattgtgaagtagtcatgcaaaacaaagcagctgaagttgagtgcaaatgttaccctgggtttgtttacaacaacgccagtcagaagtctctggggtgctaccataatttcactgtagacggctgcaccggaaatgagaagccacggctgcggtacaaggtagaggccttggacaatacatcgtggattaatcatccttattcagtgatacctattcaaaacaaggaagattgcagtgactcttgcctggaagactgcaactgttgggctgtgctatatacagatgctaattgcagtaaatacaagcctccacttttatatggcaaaacaaattcaagtatatcctctaagggtttcttcaaagtgcttctaccgagaaatatggatggcatgccaaacaattttcccgaactaaccgaaagcctgacggtaactgaaagcaagaataatagtctaattctaattcttgccatcactctgggttccattgcattcttgtgttttgtccttgccatctcgagtttcaccatatacaagcaccgagttcataggtacgagaagcttttgaaacattcgagtttggcattagcagatcaagagtacttcactttacaatcgttttcttatgctgagctcgaaagagcaacagatggcttcaaggaagagataggaaggggtactttcggagcagtttataaaggaactctgtccggggccagctctaacaaaactgttgctgttaaaagactggagaaagtggttgatgaaggagtaagggaatttatagctgaaattaccaccattggacgaactcaccacagaaacttaattcagttgcttggtttctgtattgagggttctcggaagcttcttgtttatgaatacatgagcaacggctcacttgcggatcttatctttaaggccaaaagtgtgcactcatcttggaaagaaagggtaagacttgtattcgatgtggctaaaggggtcctctatttacatgacgaatgcagtgtccatatcattcactccaatttgaaaccccaaaacgtactcttggatcatacttggacggctaagatatctgatttcggtttggccaggctggtgccaaatgaaacaaaaatcaactctactggaggaggaggagcgggaacagtcgaacaggtgagaagaggttacttggcgcctgaatgggagaagaatgctctgatatctgtaaaagctgatatctacagttttggtattgtgcttctagagattgtatgttgtagaagaaacatagaagtaaatgtttcaacaccagatgagatcattctttcgagttgggtcagtaaatgctttgctgctggagaattagataagcttgtggaggacgatgaaaatgtagatttgaagaccctagaaagaatggtgaaggtggggttgtggtgtgttcaacatgatccagctttgcgtcctttgatgaagaatgtaatcttgatgttggaagggacaatggacataccagttccaccatgtccagttccaccacagactagcaggcacggtgacgatggcaataagccattgtggctggacagggtgaccggaagtgtttgcacgtcgatttctgcaaaggccatggttattacagggattgaggatccgcgatactggaagaattgggtccccggcaagcctatcagcggttttggcgtggctaaagttttgaaatctggcaaggcgacttggtttggggaatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

B_lectin PAN_2 Pkinase Pkinase_Tyr S_locus_glycop

Protein Analysis

876

Amino Acids

96.5

Weight (kDa)

6.31

Isoelectric Point (pI)

30.98

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003934)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g23390
prunus_persica	Prupe.6G165100_v2.0.a1 Prupe.6G165400_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0118681 RchiOBHm_Chr2g0118741 RchiOBHm_Chr2g0118761
rosa_laevigata	RLG00000018419
rosa_multiflora	Rmu_co8322353.1_g000001 Rmu_sc0001814.1_g000026 Rmu_sc0001814.1_g000032 Rmu_sc0002700.1_g000009 Rmu_sc0002700.1_g000033 Rmu_sc0002700.1_g000035 Rmu_sc0002831.1_g000014 Rmu_sc0002831.1_g000017 Rmu_sc0002831.1_g000031 Rmu_sc0004399.1_g000001
rosa_roxburghii	Rroxscaffold_2G00124760 Rroxscaffold_2G00124850 Rroxscaffold_2G00124890 Rroxscaffold_2G00125410 Rroxscaffold_2G00125420
rosa_rugosa	Rorug02G0218400
rosa_samantha	Rh2AG274700 Rh2AG275000 Rh2AG275300 Rh2BG286500 Rh2BG286700 Rh2BG287100 Rh2DG301500 Rh2DG301700
rosa_wichuraiana	Rw2G021850 Rw2G021890 Rw2G021930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1584
AccB1I	GGYRCC	2 cut(s)	1993, 2071
AccB7I	CCANNNNNTGG	1 cut(s)	469
AccBSI	CCGCTC	1 cut(s)	2036
AccI	GTMKAC	2 cut(s)	166, 1005
AccII	CGCG	1 cut(s)	2536
AccIII	TCCGGA	1 cut(s)	380
AciI	CCGC	7 cut(s)	360, 522, 1039, 1793, 2036, 2534, 2574
AclWI	GGATC	5 cut(s)	1803, 1953, 2324, 2525, 2538
AcoI	YGGCCR	2 cut(s)	115, 1983
AcsI	RAATTY	2 cut(s)	1219, 1667
AcuI	CTGAAG	1 cut(s)	942
AcyI	GRCGYC	1 cut(s)	2072
AfaI	GTAC	8 cut(s)	685, 710, 782, 1043, 1442, 1490, 1567, 1938
AfiI	CCNNNNNNNGG	2 cut(s)	469, 2573
AhlI	ACTAGT	1 cut(s)	332
AjiI	CACGTC	1 cut(s)	2490
AjnI	CCWGG	5 cut(s)	51, 534, 943, 1134, 1985
AloI	GAACNNNNNNTCC	2 cut(s)	653, 685
Alw21I	GWGCWC	2 cut(s)	1524, 1824
Alw26I	GTCTC	6 cut(s)	235, 255, 272, 398, 638, 981
Alw44I	GTGCAC	1 cut(s)	1820
AlwI	GGATC	5 cut(s)	1803, 1953, 2324, 2525, 2538
Ama87I	CYCGRG	2 cut(s)	687, 1405
Aor13HI	TCCGGA	1 cut(s)	380
AoxI	GGCC	9 cut(s)	115, 289, 460, 483, 1053, 1602, 1809, 1983, 2505
ApaLI	GTGCAC	1 cut(s)	1820
ApeKI	GCWGC	7 cut(s)	362, 365, 599, 917, 1011, 1036, 2231
ApoI	RAATTY	2 cut(s)	1219, 1667
ArsI	GACNNNNNNTTYG	2 cut(s)	1884, 1916
AseI	ATTAAT	1 cut(s)	1077
AspLEI	GCGC	1 cut(s)	2074
AspS9I	GGNCC	4 cut(s)	851, 1602, 1873, 2554
AsuC2I	CCSGG	2 cut(s)	1600, 2559
AsuHPI	GGTGA	7 cut(s)	707, 1405, 1694, 2065, 2311, 2447, 2482
AvaI	CYCGRG	2 cut(s)	687, 1405
AvaII	GGWCC	3 cut(s)	851, 1873, 2554
BaeGI	GKGCMC	1 cut(s)	1824
BalI	TGGCCA	1 cut(s)	1985
BamHI	GGATCC	1 cut(s)	2530
BanI	GGYRCC	2 cut(s)	1993, 2071
BanII	GRGCYC	2 cut(s)	59, 1524
BbsI	GAAGAC	2 cut(s)	1146, 2288
Bbv12I	GWGCWC	2 cut(s)	1524, 1824
BbvI	GCAGC	7 cut(s)	349, 377, 586, 929, 998, 1023, 2218
BccI	CCATC	7 cut(s)	545, 720, 1268, 1367, 1409, 1532, 2435
BceAI	ACGGC	7 cut(s)	102, 166, 718, 1024, 1049, 1798, 1974
BcgI	CGANNNNNNTGC	2 cut(s)	687, 721
BciT130I	CCWGG	5 cut(s)	53, 536, 945, 1136, 1987
BcnI	CCSGG	2 cut(s)	1600, 2559
BcoDI	GTCTC	6 cut(s)	235, 255, 272, 398, 638, 981
BcuI	ACTAGT	1 cut(s)	332
BfaI	CTAG	6 cut(s)	333, 495, 615, 2141, 2288, 2424
BfmI	CTRYAG	4 cut(s)	363, 507, 1002, 2119
BfoI	RGCGCY	1 cut(s)	2075
BglI	GCCNNNNNGGC	1 cut(s)	2458
BisI	GCNGC	8 cut(s)	360, 363, 366, 600, 918, 1012, 1037, 2232
BlpI	GCTNAGC	1 cut(s)	1518
BlsI	GCNGC	8 cut(s)	361, 364, 367, 601, 919, 1013, 1038, 2233
BmcAI	AGTACT	2 cut(s)	685, 1490
Bme1390I	CCNGG	7 cut(s)	53, 536, 945, 1136, 1600, 1987, 2559
Bme18I	GGWCC	3 cut(s)	851, 1873, 2554
BmeT110I	CYCGRG	2 cut(s)	687, 1405
BmgBI	CACGTC	1 cut(s)	2490
BmgT120I	GGNCC	4 cut(s)	851, 1602, 1873, 2554
BmiI	GGNNCC	9 cut(s)	58, 1372, 1603, 1874, 1995, 2073, 2532, 2555, 2556
BmrFI	CCNGG	7 cut(s)	53, 536, 945, 1136, 1600, 1987, 2559
BmrI	ACTGGG	1 cut(s)	464
BmsI	GCATC	4 cut(s)	359, 509, 531, 1162
BmuI	ACTGGG	1 cut(s)	464
BpiI	GAAGAC	2 cut(s)	1146, 2288
BplI	GAGNNNNNCTC	2 cut(s)	252, 284
BpmI	CTGGAG	5 cut(s)	502, 557, 1658, 2043, 2256
Bpu1102I	GCTNAGC	1 cut(s)	1518
BpuEI	CTTGAG	1 cut(s)	301
BpuMI	CCSGG	2 cut(s)	1600, 2559
BsaHI	GRCGYC	1 cut(s)	2072
BsaI	GGTCTC	1 cut(s)	272
BsaWI	WCCGGW	4 cut(s)	380, 803, 1016, 2474
Bsc4I	CCNNNNNNNGG	2 cut(s)	469, 2573
Bse118I	RCCGGY	1 cut(s)	570
Bse1I	ACTGG	8 cut(s)	459, 672, 966, 1641, 2026, 2393, 2408, 2546
Bse3DI	GCAATG	1 cut(s)	1374
BseAI	TCCGGA	1 cut(s)	380
BseBI	CCWGG	5 cut(s)	53, 536, 945, 1136, 1987
BseGI	GGATG	2 cut(s)	1081, 1279
BseLI	CCNNNNNNNGG	2 cut(s)	469, 2573
BseMI	GCAATG	1 cut(s)	1374
BseMII	CTCAG	3 cut(s)	100, 671, 1509
BseNI	ACTGG	8 cut(s)	459, 672, 966, 1641, 2026, 2393, 2408, 2546
BseRI	GAGGAG	5 cut(s)	49, 223, 2040, 2043, 2046
BseSI	GKGCMC	1 cut(s)	1824
BseXI	GCAGC	7 cut(s)	349, 377, 586, 929, 998, 1023, 2218
BsgI	GTGCAG	1 cut(s)	997
Bsh1236I	CGCG	1 cut(s)	2536
BshFI	GGCC	9 cut(s)	117, 291, 462, 485, 1055, 1604, 1811, 1985, 2507
BshNI	GGYRCC	2 cut(s)	1993, 2071
BsiHKAI	GWGCWC	2 cut(s)	1524, 1824
BsiHKCI	CYCGRG	2 cut(s)	687, 1405
BsiSI	CCGG	7 cut(s)	381, 571, 804, 1017, 1599, 2475, 2559
BslFI	GGGAC	2 cut(s)	2392, 2540
BslI	CCNNNNNNNGG	2 cut(s)	469, 2573
BsmAI	GTCTC	6 cut(s)	235, 255, 272, 398, 638, 981
BsmBI	CGTCTC	1 cut(s)	255
BsmFI	GGGAC	2 cut(s)	2392, 2540
BsmI	GAATGC	3 cut(s)	1379, 1898, 2095
BsnI	GGCC	9 cut(s)	117, 291, 462, 485, 1055, 1604, 1811, 1985, 2507
Bso31I	GGTCTC	1 cut(s)	272
BsoBI	CYCGRG	2 cut(s)	687, 1405
Bsp1286I	GDGCHC	3 cut(s)	59, 1524, 1824
Bsp13I	TCCGGA	1 cut(s)	380
Bsp143I	GATC	6 cut(s)	1480, 1795, 1945, 2196, 2329, 2530
Bsp1720I	GCTNAGC	1 cut(s)	1518
Bsp19I	CCATGG	1 cut(s)	2508
BspACI	CCGC	7 cut(s)	360, 522, 1039, 1793, 2036, 2534, 2574
BspANI	GGCC	9 cut(s)	117, 291, 462, 485, 1055, 1604, 1811, 1985, 2507
BspCNI	CTCAG	3 cut(s)	99, 672, 1510
BspEI	TCCGGA	1 cut(s)	380
BspFNI	CGCG	1 cut(s)	2536
BspLI	GGNNCC	9 cut(s)	58, 1372, 1603, 1874, 1995, 2073, 2532, 2555, 2556
BspMAI	CTGCAG	1 cut(s)	367
BspPI	GGATC	5 cut(s)	1803, 1953, 2324, 2525, 2538
BspT107I	GGYRCC	2 cut(s)	1993, 2071
BspTNI	GGTCTC	1 cut(s)	272
BsrBI	CCGCTC	1 cut(s)	2036
BsrDI	GCAATG	1 cut(s)	1374
BsrFI	RCCGGY	1 cut(s)	570
BsrI	ACTGG	8 cut(s)	459, 672, 966, 1641, 2026, 2393, 2408, 2546
BssAI	RCCGGY	1 cut(s)	570
BssMI	GATC	6 cut(s)	1480, 1795, 1945, 2196, 2329, 2530
BssNAI	GTATAC	1 cut(s)	167
BssNI	GRCGYC	1 cut(s)	2072
BssT1I	CCWWGG	3 cut(s)	486, 1056, 2508
Bst1107I	GTATAC	1 cut(s)	167
Bst2UI	CCWGG	5 cut(s)	53, 536, 945, 1136, 1987
Bst6I	CTCTTC	2 cut(s)	1545, 2053
BstACI	GRCGYC	1 cut(s)	2072
BstAPI	GCANNNNNTGC	1 cut(s)	356
BstC8I	GCNNGC	6 cut(s)	524, 546, 1280, 1606, 2429, 2564
BstDEI	CTNAG	6 cut(s)	86, 629, 680, 1236, 1518, 1962
BstDSI	CCRYGG	2 cut(s)	1031, 2508
BstEII	GGTNACC	1 cut(s)	2470
BstF5I	GGATG	2 cut(s)	1081, 1279
BstFNI	CGCG	1 cut(s)	2536
BstH2I	RGCGCY	1 cut(s)	2075
BstHHI	GCGC	1 cut(s)	2074
BstKTI	GATC	6 cut(s)	1483, 1798, 1948, 2199, 2332, 2533
BstMAI	GTCTC	6 cut(s)	235, 255, 272, 398, 638, 981
BstMBI	GATC	6 cut(s)	1480, 1795, 1945, 2196, 2329, 2530
BstMWI	GCNNNNNNNGC	9 cut(s)	356, 365, 482, 596, 827, 876, 1036, 2458, 2580
BstNI	CCWGG	5 cut(s)	53, 536, 945, 1136, 1987
BstNSI	RCATGY	1 cut(s)	1282
BstPI	GGTNACC	1 cut(s)	2470
BstSCI	CCNGG	7 cut(s)	51, 534, 943, 1134, 1598, 1985, 2557
BstSFI	CTRYAG	4 cut(s)	363, 507, 1002, 2119
BstSLI	GKGCMC	1 cut(s)	1824
BstUI	CGCG	1 cut(s)	2536
BstV1I	GCAGC	7 cut(s)	349, 377, 586, 929, 998, 1023, 2218
BstV2I	GAAGAC	2 cut(s)	1146, 2288
BstX2I	RGATCY	2 cut(s)	1795, 2530
BstXI	CCANNNNNNTGG	2 cut(s)	674, 1366
BstYI	RGATCY	2 cut(s)	1795, 2530
BstZ17I	GTATAC	1 cut(s)	167
BsuRI	GGCC	9 cut(s)	117, 291, 462, 485, 1055, 1604, 1811, 1985, 2507
BtgI	CCRYGG	2 cut(s)	1031, 2508
BtrI	CACGTC	1 cut(s)	2490
BtsCI	GGATG	2 cut(s)	1081, 1279
BtsI	GCAGTG	2 cut(s)	1129, 1903
BtsIMutI	CAGTG	6 cut(s)	245, 679, 999, 1098, 1129, 1903
Cac8I	GCNNGC	6 cut(s)	524, 546, 1280, 1606, 2429, 2564
CfoI	GCGC	1 cut(s)	2074
Cfr10I	RCCGGY	1 cut(s)	570
Cfr13I	GGNCC	4 cut(s)	851, 1602, 1873, 2554
CseI	GACGC	1 cut(s)	2330
Csp6I	GTAC	8 cut(s)	684, 709, 781, 1042, 1441, 1489, 1566, 1937
CviQI	GTAC	8 cut(s)	684, 709, 781, 1042, 1441, 1489, 1566, 1937
DdeI	CTNAG	6 cut(s)	86, 629, 680, 1236, 1518, 1962
DinI	GGCGCC	1 cut(s)	2073
DpnI	GATC	6 cut(s)	1482, 1797, 1947, 2198, 2331, 2532
DpnII	GATC	6 cut(s)	1480, 1795, 1945, 2196, 2329, 2530
EaeI	YGGCCR	2 cut(s)	115, 1983
Eam1104I	CTCTTC	2 cut(s)	1545, 2053
EarI	CTCTTC	2 cut(s)	1545, 2053
Ecl136II	GAGCTC	1 cut(s)	1522
Eco130I	CCWWGG	3 cut(s)	486, 1056, 2508
Eco147I	AGGCCT	1 cut(s)	1055
Eco24I	GRGCYC	2 cut(s)	59, 1524
Eco31I	GGTCTC	1 cut(s)	272
Eco32I	GATATC	4 cut(s)	342, 1968, 2100, 2116
Eco47I	GGWCC	3 cut(s)	851, 1873, 2554
Eco53kI	GAGCTC	1 cut(s)	1522
Eco57I	CTGAAG	1 cut(s)	942
Eco88I	CYCGRG	2 cut(s)	687, 1405
Eco91I	GGTNACC	1 cut(s)	2470
EcoICRI	GAGCTC	1 cut(s)	1522
EcoO109I	RGGNCCY	2 cut(s)	1873, 2554
EcoO65I	GGTNACC	1 cut(s)	2470
EcoRII	CCWGG	5 cut(s)	51, 534, 943, 1134, 1985
EcoRV	GATATC	4 cut(s)	342, 1968, 2100, 2116
EcoT14I	CCWWGG	3 cut(s)	486, 1056, 2508
EcoT22I	ATGCAT	1 cut(s)	352
EcoT38I	GRGCYC	2 cut(s)	59, 1524
EgeI	GGCGCC	1 cut(s)	2073
EheI	GGCGCC	1 cut(s)	2073
ErhI	CCWWGG	3 cut(s)	486, 1056, 2508
Esp3I	CGTCTC	1 cut(s)	255
FalI	AAGNNNNNCTT	4 cut(s)	1229, 1261, 1552, 1584
FaqI	GGGAC	2 cut(s)	2392, 2540
FauI	CCCGC	2 cut(s)	515, 2029
FblI	GTMKAC	2 cut(s)	166, 1005
Fnu4HI	GCNGC	8 cut(s)	360, 363, 366, 600, 918, 1012, 1037, 2232
FokI	GGATG	2 cut(s)	1068, 1286
FriOI	GRGCYC	2 cut(s)	59, 1524
Fsp4HI	GCNGC	8 cut(s)	360, 363, 366, 600, 918, 1012, 1037, 2232
FspBI	CTAG	6 cut(s)	333, 495, 615, 2141, 2288, 2424
GlaI	GCGC	1 cut(s)	2073
GluI	GCNGC	8 cut(s)	360, 363, 366, 600, 918, 1012, 1037, 2232
GsuI	CTGGAG	5 cut(s)	502, 557, 1658, 2043, 2256
HaeII	RGCGCY	1 cut(s)	2075
HaeIII	GGCC	9 cut(s)	117, 291, 462, 485, 1055, 1604, 1811, 1985, 2507
HapII	CCGG	7 cut(s)	381, 571, 804, 1017, 1599, 2475, 2559
HgaI	GACGC	1 cut(s)	2330
HhaI	GCGC	1 cut(s)	2074
Hin1I	GRCGYC	1 cut(s)	2072
Hin6I	GCGC	1 cut(s)	2072
HinP1I	GCGC	1 cut(s)	2072
HindIII	AAGCTT	3 cut(s)	1448, 1754, 2249
HinfI	GANTC	2 cut(s)	377, 1127
HpaII	CCGG	7 cut(s)	381, 571, 804, 1017, 1599, 2475, 2559
HphI	GGTGA	7 cut(s)	707, 1405, 1694, 2065, 2311, 2447, 2482
Hpy166II	GTNNAC	4 cut(s)	167, 955, 1006, 1822
Hpy188III	TCNNGA	7 cut(s)	215, 381, 1295, 1405, 1484, 2141, 2365
Hpy8I	GTNNAC	4 cut(s)	167, 955, 1006, 1822
Hpy99I	CGWCG	1 cut(s)	2494
HpyAV	CCTTC	5 cut(s)	136, 1554, 1649, 2296, 2369
HpyCH4IV	ACGT	2 cut(s)	1935, 2489
HpyF10VI	GCNNNNNNNGC	9 cut(s)	356, 365, 482, 596, 827, 876, 1036, 2458, 2580
HpyF3I	CTNAG	6 cut(s)	86, 629, 680, 1236, 1518, 1962
HpySE526I	ACGT	2 cut(s)	1935, 2489
Hsp92I	GRCGYC	1 cut(s)	2072
HspAI	GCGC	1 cut(s)	2072
KasI	GGCGCC	1 cut(s)	2071
KflI	GGGWCCC	1 cut(s)	2554
Kpn2I	TCCGGA	1 cut(s)	380
Kzo9I	GATC	6 cut(s)	1480, 1795, 1945, 2196, 2329, 2530
LmnI	GCTCC	4 cut(s)	62, 818, 1574, 2033
Lsp1109I	GCAGC	7 cut(s)	349, 377, 586, 929, 998, 1023, 2218
LweI	GCATC	4 cut(s)	359, 509, 531, 1162
MaeI	CTAG	6 cut(s)	333, 495, 615, 2141, 2288, 2424
MaeII	ACGT	2 cut(s)	1935, 2489
MaeIII	GTNAC	7 cut(s)	620, 938, 1124, 1318, 2063, 2435, 2470
MalI	GATC	6 cut(s)	1482, 1797, 1947, 2198, 2331, 2532
MbiI	CCGCTC	1 cut(s)	2036
MboI	GATC	6 cut(s)	1480, 1795, 1945, 2196, 2329, 2530
MflI	RGATCY	2 cut(s)	1795, 2530
MhlI	GDGCHC	3 cut(s)	59, 1524, 1824
MlsI	TGGCCA	1 cut(s)	1985
MluNI	TGGCCA	1 cut(s)	1985
Mly113I	GGCGCC	1 cut(s)	2072
MlyI	GAGTC	1 cut(s)	1121
MmeI	TCCRAC	1 cut(s)	2352
Mox20I	TGGCCA	1 cut(s)	1985
Mph1103I	ATGCAT	1 cut(s)	352
MroI	TCCGGA	1 cut(s)	380
MscI	TGGCCA	1 cut(s)	1985
MseI	TTAA	7 cut(s)	44, 177, 323, 1077, 1629, 1715, 1806
MslI	CAYNNNNRTG	1 cut(s)	1384
Msp20I	TGGCCA	1 cut(s)	1985
MspA1I	CMGCKG	4 cut(s)	362, 522, 920, 2574
MspI	CCGG	7 cut(s)	381, 571, 804, 1017, 1599, 2475, 2559
MspR9I	CCNGG	7 cut(s)	53, 536, 945, 1136, 1600, 1987, 2559
Mva1269I	GAATGC	3 cut(s)	1379, 1898, 2095
MvaI	CCWGG	5 cut(s)	53, 536, 945, 1136, 1987
MvnI	CGCG	1 cut(s)	2536
MwoI	GCNNNNNNNGC	9 cut(s)	356, 365, 482, 596, 827, 876, 1036, 2458, 2580
NarI	GGCGCC	1 cut(s)	2072
NciI	CCSGG	2 cut(s)	1600, 2559
NcoI	CCATGG	1 cut(s)	2508
NdeII	GATC	6 cut(s)	1480, 1795, 1945, 2196, 2329, 2530
NlaIV	GGNNCC	9 cut(s)	58, 1372, 1603, 1874, 1995, 2073, 2532, 2555, 2556
NmuCI	GTSAC	3 cut(s)	1124, 2435, 2470
NsiI	ATGCAT	1 cut(s)	352
NspI	RCATGY	1 cut(s)	1282
PaeI	GCATGC	1 cut(s)	1282
PaeR7I	CTCGAG	1 cut(s)	1405
PasI	CCCWGGG	1 cut(s)	944
PceI	AGGCCT	1 cut(s)	1055
PctI	GAATGC	3 cut(s)	1379, 1898, 2095
PfeI	GAWTC	1 cut(s)	377
PflMI	CCANNNNNTGG	1 cut(s)	469
PkrI	GCNGC	8 cut(s)	361, 364, 367, 601, 919, 1013, 1038, 2233
PleI	GAGTC	1 cut(s)	1121
PluTI	GGCGCC	1 cut(s)	2075
PpsI	GAGTC	1 cut(s)	1121
PpuMI	RGGWCCY	2 cut(s)	1873, 2554
PshBI	ATTAAT	1 cut(s)	1077
PsiI	TTATAA	1 cut(s)	1584
Psp124BI	GAGCTC	1 cut(s)	1524
Psp5II	RGGWCCY	2 cut(s)	1873, 2554
Psp6I	CCWGG	5 cut(s)	51, 534, 943, 1134, 1985
PspEI	GGTNACC	1 cut(s)	2470
PspGI	CCWGG	5 cut(s)	51, 534, 943, 1134, 1985
PspN4I	GGNNCC	9 cut(s)	58, 1372, 1603, 1874, 1995, 2073, 2532, 2555, 2556
PspPI	GGNCC	4 cut(s)	851, 1602, 1873, 2554
PspPPI	RGGWCCY	2 cut(s)	1873, 2554
PsrI	GAACNNNNNNTAC	2 cut(s)	1729, 1761
PstI	CTGCAG	1 cut(s)	367
PsuI	RGATCY	2 cut(s)	1795, 2530
PvuII	CAGCTG	1 cut(s)	920
RsaI	GTAC	8 cut(s)	685, 710, 782, 1043, 1442, 1490, 1567, 1938
RsaNI	GTAC	8 cut(s)	684, 709, 781, 1042, 1441, 1489, 1566, 1937
RseI	CAYNNNNRTG	1 cut(s)	1384
SacI	GAGCTC	1 cut(s)	1524
SaqAI	TTAA	7 cut(s)	44, 177, 323, 1077, 1629, 1715, 1806
SatI	GCNGC	8 cut(s)	360, 363, 366, 600, 918, 1012, 1037, 2232
Sau3AI	GATC	6 cut(s)	1480, 1795, 1945, 2196, 2329, 2530
Sau96I	GGNCC	4 cut(s)	851, 1602, 1873, 2554
ScaI	AGTACT	2 cut(s)	685, 1490
SchI	GAGTC	1 cut(s)	1121
ScrFI	CCNGG	7 cut(s)	53, 536, 945, 1136, 1600, 1987, 2559
SduI	GDGCHC	3 cut(s)	59, 1524, 1824
SfaNI	GCATC	4 cut(s)	359, 509, 531, 1162
SfcI	CTRYAG	4 cut(s)	363, 507, 1002, 2119
SfoI	GGCGCC	1 cut(s)	2073
Sfr274I	CTCGAG	1 cut(s)	1405
SinI	GGWCC	3 cut(s)	851, 1873, 2554
SlaI	CTCGAG	1 cut(s)	1405
SmiMI	CAYNNNNRTG	1 cut(s)	1384
SmlI	CTYRAG	2 cut(s)	316, 1405
SmoI	CTYRAG	2 cut(s)	316, 1405
SpeI	ACTAGT	1 cut(s)	332
SphI	GCATGC	1 cut(s)	1282
SseBI	AGGCCT	1 cut(s)	1055
SsiI	CCGC	7 cut(s)	360, 522, 1039, 1793, 2036, 2534, 2574
SspDI	GGCGCC	1 cut(s)	2071
SspMI	CTAG	6 cut(s)	333, 495, 615, 2141, 2288, 2424
SstI	GAGCTC	1 cut(s)	1524
StuI	AGGCCT	1 cut(s)	1055
StyD4I	CCNGG	7 cut(s)	51, 534, 943, 1134, 1598, 1985, 2557
StyI	CCWWGG	3 cut(s)	486, 1056, 2508
TaiI	ACGT	2 cut(s)	1938, 2492
TaqI	TCGA	9 cut(s)	214, 353, 1406, 1463, 1524, 1857, 2046, 2207, 2492
TaqII	GACCGA	1 cut(s)	267
TatI	WGTACW	3 cut(s)	683, 780, 1488
TauI	GCSGC	1 cut(s)	362
TfiI	GAWTC	1 cut(s)	377
Tru1I	TTAA	7 cut(s)	44, 177, 323, 1077, 1629, 1715, 1806
Tru9I	TTAA	7 cut(s)	44, 177, 323, 1077, 1629, 1715, 1806
TscAI	CASTG	6 cut(s)	252, 679, 1006, 1098, 1129, 1903
TseFI	GTSAC	3 cut(s)	1124, 2435, 2470
TseI	GCWGC	7 cut(s)	362, 365, 599, 917, 1011, 1036, 2231
Tsp45I	GTSAC	3 cut(s)	1124, 2435, 2470
TspDTI	ATGAA	7 cut(s)	87, 1424, 1668, 1782, 2016, 2280, 2366
TspRI	CASTG	6 cut(s)	252, 679, 1006, 1098, 1129, 1903
Van91I	CCANNNNNTGG	1 cut(s)	469
VneI	GTGCAC	1 cut(s)	1820
VpaK11BI	GGWCC	3 cut(s)	851, 1873, 2554
VspI	ATTAAT	1 cut(s)	1077
XapI	RAATTY	2 cut(s)	1219, 1667
XbaI	TCTAGA	1 cut(s)	2140
XceI	RCATGY	1 cut(s)	1282
XhoI	CTCGAG	1 cut(s)	1405
XmiI	GTMKAC	2 cut(s)	166, 1005
XspI	CTAG	6 cut(s)	333, 495, 615, 2141, 2288, 2424
ZrmI	AGTACT	2 cut(s)	685, 1490
Zsp2I	ATGCAT	1 cut(s)	352

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.