FvH4_1g23890

Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
Physical Location & Seq
Forward (+)
15741170 .. 15748923
7754 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g23890.t3

Sequence Viewer

Length: 2754 bp
ATGGACACAAGAGGGAGGCTTGTGGCTGGTTCTCACAACAGGAATGAGTTTATTCTCATCAATGCAGATGAAGCTTCAAGGATAAAGTCTGTGGAAGAATTGAGTGGACAAATATGTCAGATTTGTGGTGATGGGATTGAGATTACAGATGATGGAGAGATCTTTGTAGCCTGCAATGAATGTGCCTTCCCCGTCTGTAGAGGTTGTTATCAGTATGAAAGAAGAGAGGGAAATCAGGCTTGTCCCCAGTGTAAAACCAGATACAAGCGCATCAAAGGTACTCCTAGGGTTGAAGGTGATGAAGAGGAAGATGATATTGATGATTTGGACAATGAGTTCTCTTATGGGAATCTTGATGCTTTGGGCTCACATCGAGTTGCTGAGGCTGTGCTGTCTTCCCACCTTAATGTTGGTTGCGGTTCCCACTATAATGCCAGCATTCCCACACACAGAGAACATGATTCCTCAACTCTGGGTTCTGAAATCCCACTCTTGACGTATGGCGAGGAGGATCCTGAGATATCATCTGATCAACATGCGCTTATTGTACCTCCATACATGGGTCATGGGAACAGAGTCCATCCTGTGCCTTTTCCTGATCCATCTTCTTTACAACCTAGACCAATGGTGCCTAAGAAAGACATTTCAGTATATGGGTATGGGAGTGTGGCTTGGAAAGATCGAATGGAAGAGTGGAAGAAAAAGCAAAATGAAAAACTTCAGGTGGTAAAGCATGAAGGAGATAATGATGGTGGAAACTTTGGTGGGAAGGAAGATGATTCTGATCTGCCCATGATGGATGAAGGCAGACAGCCACTTTCAAGGAAGATACCCATTCCTTCAAGCAAGATAAACCCATACAGAATGATGATATTACTCCGACTTGTAATCCTTGGCTTATTTTTCCATTATAGAATTCTCAATCCAGTGAAAGATGCATATGGCTTGTGGTTGACATCAGTCATATGCGAGATATGGTTTGCTGTTTCATGGATCCTGGATCAGTTCCCCAAATGGTATCCAATAGAGCGAGAAACATACCTAGATCGGCTATCACTAAGGTATGAAAAGGAAGGGAAACCATCTGAACTAGCCAGTATAGACATCTTTGTTAGTACAGTCGACCCTCTGAAAGAACCTCCTCTAATCACTGCAAACACGGTCCTTTCCATCCTAGCTGTCGATTATCCAGTCGATAAAGTTGCATGTTATGTCTCGGATGATGGTGCTGCTATGCTTACTTTTGAAGCCCTTTCTGAGACAGCTGAGTTTTCCAGGAGATGGGTCCCTTTTTGCAAGAAATATAGCATCGAGCCTCGAGCTCCAGAATGGTACTTCTCTCAGAAGATTGACTATTTGAAAAATAAAGTTCATCCTGAATTTGTAAGGGAAAGGCGTGCAATGAAGAGAGATTATGAAGAATTTAAAGTTCGGATTAATAGTTTGGTTGCCATGGCACAAAAGGTTCCGGAGGATGGCTGGACAATGCAGGATGGTACTCCCTGGCCTGGGAACAATGTACGAGACCATCCTGGCATGATTCAGGTCTTTCTTGGTAACAACGGTTTTCGTGATGATGAAGGAAATGAGTTACCTCGTCTGGTTTATGTTTCTCGTGAAAAGAGACCAGGATTTGATCACCATAAAAAGGCTGGTGCCATGAATGCTCTGATGCGGGTCTCTGCCATCATCTCTAATGCTCCTTATCTTCTGAATGTTGACTGTGATCACTACATCAACAACAGCAAGGCCCTCAGAGAAGCCATGTGCTTCATGATGGACCCTACTTCAGGGAAGAAAGTTTGCTATGTGCAGTTTCCCCAAAGATTTGATGGGATTGACCGACACGATAGATACTCAAATCGGAATGTTGTATTCTTTGATATCAACATGAAAGGATTAGATGGTATACAAGGGCCAATATATGTTGGAACTGGCTGTGTTTTCAGAAGGCAAGCTCTTTATGGGTTTGATGCACCTGCCTCAAAGAAGGCCCCTAGCAGAACCTGCAATTGCTGGCCAAAATGGTGCTGCTTCTGTTGTGGGTCAAGAAAGAACAAGAATGCAAAGTCAAAGAAAGAGAAAAAGAAGAAATCAAAACAGAGAGAAGCCTCAAAGCAGATACATGCTGTTGAAAATATTGAAGAGGGAATTGAAGAACTAATATCTGATAGATCATCTCATATGTCCCAACTGAAATTGGAGAAGAAATTTGGGCAGTCTCCTGTCTTTGTAGCCTCTTCAGTACTGGAGAATGGTGGAATTCCTCAGGACGTTAGCGCTGCATCTCTCCTGAGAGAAGCCATCCAAGTCATCAGCTGTGGTTATGAAGATAAAACAGAATGGGGAAAGGAAGTTGGCTGGATATATGGTAGTGTTACTGAGGATATTCTGACAGGATTTAAGATGCATTGCCATGGCTGGAGATCTGTTTACTGCATGCCCAAATTAGCTGCTTTCAAAGGGTCGGCTCCTATCAATCTGTCAGATCGTCTCCACCAAGTTCTGCGGTGGGCACTTGGATCAGTTGAAATTTTCTTGAGCAGACATTGTCCGATCTGGTATGGATATGGGAGTGGGTTGAAATCATTGGAGCGGTTTTCATATATCAACTCAGTCGTATATCCTTGGACCTCCATTCCTTTGATCGTTTACTGTAGTCTGCCTGCCATCTGTCTTCTGACCGGGAAATTTATTGTCCCCGAGATAAGCAACTATGCCAGTCTTGTTCCCCTTAGTCTATATCTTAGTTGA

Protein Analysis

918

Amino Acids

103.98

Weight (kDa)

6.56

Isoelectric Point (pI)

43.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-UDP PF14569 31 - 107 7.6e-40 Zinc-binding RING-finger
Cellulose_synt PF03552 369 - 1085 0.0 Cellulose synthase
Glyco_trans_2_3 PF13632 787 - 897 1.3e-06 Glycosyl transferase family group 2
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1987
AasI GACNNNNNNGTC 1 cut(s) 114
Acc36I ACCTGC 2 cut(s) 1987, 2015
AccB1I GGYRCC 2 cut(s) 628, 1655
AccB7I CCANNNNNTGG 1 cut(s) 1281
AccBSI CCGCTC 1 cut(s) 2596
AccI GTMKAC 2 cut(s) 1122, 1909
AccIII TCCGGA 1 cut(s) 1468
AciI CCGC 4 cut(s) 417, 1675, 2509, 2596
AclWI GGATC 7 cut(s) 506, 519, 593, 988, 1001, 1008, 2530
AcoI YGGCCR 1 cut(s) 2018
AcsI RAATTY 7 cut(s) 915, 1379, 1421, 2210, 2262, 2532, 2690
AcuI CTGAAG 3 cut(s) 704, 1773, 2226
AfaI GTAC 7 cut(s) 280, 549, 1117, 1334, 1498, 1521, 2247
AfeI AGCGCT 1 cut(s) 2281
AfiI CCNNNNNNNGG 7 cut(s) 560, 1281, 1475, 1508, 1509, 1648, 1790
AjnI CCWGG 6 cut(s) 996, 1274, 1502, 1507, 1531, 1627
AloI GAACNNNNNNTCC 2 cut(s) 320, 352
AluBI AGCT 7 cut(s) 74, 1178, 1265, 1322, 1958, 2319, 2453
AluI AGCT 7 cut(s) 74, 1178, 1265, 1322, 1958, 2319, 2453
Alw21I GWGCWC 1 cut(s) 1324
Alw26I GTCTC 7 cut(s) 1219, 1253, 1518, 1618, 1684, 2226, 2498
AlwI GGATC 7 cut(s) 506, 519, 593, 988, 1001, 1008, 2530
AlwNI CAGNNNCTG 1 cut(s) 2007
Ama87I CYCGRG 2 cut(s) 1317, 2702
Aor13HI TCCGGA 1 cut(s) 1468
Aor51HI AGCGCT 1 cut(s) 2281
AoxI GGCC 5 cut(s) 1505, 1749, 1916, 1992, 2018
ApeKI GCWGC 4 cut(s) 1229, 2031, 2282, 2453
ApoI RAATTY 7 cut(s) 915, 1379, 1421, 2210, 2262, 2532, 2690
AseI ATTAAT 1 cut(s) 1437
Asp700I GAANNNNTTC 1 cut(s) 717
AspA2I CCTAGG 1 cut(s) 284
AspLEI GCGC 3 cut(s) 270, 541, 2282
AspS9I GGNCC 7 cut(s) 1162, 1285, 1750, 1780, 1916, 1993, 2631
AsuC2I CCSGG 1 cut(s) 2686
AsuHPI GGTGA 3 cut(s) 140, 308, 1631
AvaI CYCGRG 2 cut(s) 1317, 2702
AvaII GGWCC 4 cut(s) 1162, 1285, 1780, 2631
AvrII CCTAGG 1 cut(s) 284
AxyI CCTNAGG 1 cut(s) 2268
BaeGI GKGCMC 1 cut(s) 2518
BalI TGGCCA 1 cut(s) 2020
BamHI GGATCC 2 cut(s) 511, 993
BanI GGYRCC 2 cut(s) 628, 1655
BanII GRGCYC 2 cut(s) 368, 1324
BauI CACGAG 1 cut(s) 1614
BbsI GAAGAC 2 cut(s) 387, 2669
Bbv12I GWGCWC 1 cut(s) 1324
BbvCI CCTCAGC 1 cut(s) 381
BbvI GCAGC 4 cut(s) 1216, 2018, 2269, 2440
BcgI CGANNNNNNTGC 2 cut(s) 1184, 1218
BciT130I CCWGG 6 cut(s) 998, 1276, 1504, 1509, 1533, 1629
BciVI GTATCC 1 cut(s) 1029
BclI TGATCA 3 cut(s) 529, 1636, 1726
BcnI CCSGG 1 cut(s) 2686
BcoDI GTCTC 7 cut(s) 1219, 1253, 1518, 1618, 1684, 2226, 2498
BfaI CTAG 6 cut(s) 285, 618, 1043, 1091, 1175, 1998
BfmI CTRYAG 2 cut(s) 196, 2656
BfoI RGCGCY 1 cut(s) 2283
BfuAI ACCTGC 2 cut(s) 1987, 2015
BfuI GTATCC 1 cut(s) 1029
BglII AGATCT 2 cut(s) 159, 2426
BisI GCNGC 4 cut(s) 1230, 2032, 2283, 2454
BlnI CCTAGG 1 cut(s) 284
BlsI GCNGC 4 cut(s) 1231, 2033, 2284, 2455
BmcAI AGTACT 1 cut(s) 2247
Bme1390I CCNGG 7 cut(s) 998, 1276, 1504, 1509, 1533, 1629, 2686
Bme18I GGWCC 4 cut(s) 1162, 1285, 1780, 2631
BmeT110I CYCGRG 2 cut(s) 1317, 2702
BmgT120I GGNCC 7 cut(s) 1162, 1285, 1750, 1780, 1916, 1993, 2631
BmrFI CCNGG 7 cut(s) 998, 1276, 1504, 1509, 1533, 1629, 2686
BmrI ACTGGG 1 cut(s) 241
BmsI GCATC 8 cut(s) 279, 346, 925, 1317, 1662, 1963, 2294, 2397
BmuI ACTGGG 1 cut(s) 241
BoxI GACNNNNGTC 1 cut(s) 959
BpiI GAAGAC 2 cut(s) 387, 2669
BpmI CTGGAG 3 cut(s) 1308, 2270, 2443
Bpu10I CCTNAGC 1 cut(s) 381
BpuEI CTTGAG 1 cut(s) 2560
BpuMI CCSGG 1 cut(s) 2686
BsaBI GATNNNNATC 1 cut(s) 783
BsaI GGTCTC 3 cut(s) 1518, 1618, 1684
BsaJI CCNNGG 7 cut(s) 284, 892, 1452, 1502, 1508, 2416, 2627
BsaWI WCCGGW 1 cut(s) 1468
Bsc4I CCNNNNNNNGG 7 cut(s) 560, 1281, 1475, 1508, 1509, 1648, 1790
Bse1I ACTGG 7 cut(s) 247, 926, 1095, 1190, 1939, 2253, 2721
Bse21I CCTNAGG 1 cut(s) 2268
Bse3DI GCAATG 3 cut(s) 181, 1407, 2410
Bse8I GATNNNNATC 1 cut(s) 783
BseAI TCCGGA 1 cut(s) 1468
BseBI CCWGG 6 cut(s) 998, 1276, 1504, 1509, 1533, 1629
BseDI CCNNGG 7 cut(s) 284, 892, 1452, 1502, 1508, 2416, 2627
BseGI GGATG 9 cut(s) 580, 805, 1170, 1225, 1372, 1480, 1498, 1528, 2304
BseJI GATNNNNATC 1 cut(s) 783
BseLI CCNNNNNNNGG 7 cut(s) 560, 1281, 1475, 1508, 1509, 1648, 1790
BseMI GCAATG 3 cut(s) 181, 1407, 2410
BseNI ACTGG 7 cut(s) 247, 926, 1095, 1190, 1939, 2253, 2721
BseRI GAGGAG 2 cut(s) 521, 1131
BseSI GKGCMC 1 cut(s) 2518
BseXI GCAGC 4 cut(s) 1216, 2018, 2269, 2440
BsgI GTGCAG 1 cut(s) 1832
BshFI GGCC 5 cut(s) 1507, 1751, 1918, 1994, 2020
BshNI GGYRCC 2 cut(s) 628, 1655
BsiHKAI GWGCWC 1 cut(s) 1324
BsiHKCI CYCGRG 2 cut(s) 1317, 2702
BsiSI CCGG 2 cut(s) 1469, 2685
BslFI GGGAC 4 cut(s) 228, 1271, 2173, 2684
BslI CCNNNNNNNGG 7 cut(s) 560, 1281, 1475, 1508, 1509, 1648, 1790
BsmAI GTCTC 7 cut(s) 1219, 1253, 1518, 1618, 1684, 2226, 2498
BsmBI CGTCTC 1 cut(s) 2498
BsmFI GGGAC 4 cut(s) 228, 1271, 2173, 2684
BsmI GAATGC 3 cut(s) 438, 1669, 2068
BsnI GGCC 5 cut(s) 1507, 1751, 1918, 1994, 2020
Bso31I GGTCTC 3 cut(s) 1518, 1618, 1684
BsoBI CYCGRG 2 cut(s) 1317, 2702
Bsp1286I GDGCHC 3 cut(s) 368, 1324, 2518
Bsp13I TCCGGA 1 cut(s) 1468
Bsp19I CCATGG 2 cut(s) 1452, 2416
BspACI CCGC 4 cut(s) 417, 1675, 2509, 2596
BspANI GGCC 5 cut(s) 1507, 1751, 1918, 1994, 2020
BspEI TCCGGA 1 cut(s) 1468
BspHI TCATGA 1 cut(s) 1773
BspMI ACCTGC 2 cut(s) 1987, 2015
BspPI GGATC 7 cut(s) 506, 519, 593, 988, 1001, 1008, 2530
BspT107I GGYRCC 2 cut(s) 628, 1655
BspTNI GGTCTC 3 cut(s) 1518, 1618, 1684
BsrBI CCGCTC 1 cut(s) 2596
BsrDI GCAATG 3 cut(s) 181, 1407, 2410
BsrI ACTGG 7 cut(s) 247, 926, 1095, 1190, 1939, 2253, 2721
BssECI CCNNGG 7 cut(s) 284, 892, 1452, 1502, 1508, 2416, 2627
BssNAI GTATAC 1 cut(s) 1910
BssSI CACGAG 1 cut(s) 1614
BssT1I CCWWGG 5 cut(s) 284, 892, 1452, 2416, 2627
Bst1107I GTATAC 1 cut(s) 1910
Bst2BI CACGAG 1 cut(s) 1614
Bst2UI CCWGG 6 cut(s) 998, 1276, 1504, 1509, 1533, 1629
Bst4CI ACNGT 5 cut(s) 1120, 1162, 1565, 1724, 2657
Bst6I CTCTTC 6 cut(s) 217, 297, 684, 1400, 2139, 2245
BstAPI GCANNNNNTGC 1 cut(s) 2007
BstC8I GCNNGC 7 cut(s) 172, 436, 1398, 1956, 2018, 2441, 2667
BstDSI CCRYGG 2 cut(s) 1452, 2416
BstENI CCTNNNNNAGG 1 cut(s) 1788
BstF5I GGATG 9 cut(s) 580, 805, 1170, 1225, 1372, 1480, 1498, 1528, 2304
BstH2I RGCGCY 1 cut(s) 2283
BstHHI GCGC 3 cut(s) 270, 541, 2282
BstMAI GTCTC 7 cut(s) 1219, 1253, 1518, 1618, 1684, 2226, 2498
BstMWI GCNNNNNNNGC 3 cut(s) 71, 1664, 2007
BstNI CCWGG 6 cut(s) 998, 1276, 1504, 1509, 1533, 1629
BstNSI RCATGY 4 cut(s) 539, 1209, 2129, 2443
BstPAI GACNNNNGTC 1 cut(s) 959
BstSCI CCNGG 7 cut(s) 996, 1274, 1502, 1507, 1531, 1627, 2684
BstSFI CTRYAG 2 cut(s) 196, 2656
BstSLI GKGCMC 1 cut(s) 2518
BstV1I GCAGC 4 cut(s) 1216, 2018, 2269, 2440
BstV2I GAAGAC 2 cut(s) 387, 2669
BstX2I RGATCY 4 cut(s) 159, 511, 993, 2426
BstYI RGATCY 4 cut(s) 159, 511, 993, 2426
BstZ17I GTATAC 1 cut(s) 1910
Bsu36I CCTNAGG 1 cut(s) 2268
BsuI GTATCC 1 cut(s) 1029
BsuRI GGCC 5 cut(s) 1507, 1751, 1918, 1994, 2020
BtgI CCRYGG 2 cut(s) 1452, 2416
BtsCI GGATG 9 cut(s) 580, 805, 1170, 1225, 1372, 1480, 1498, 1528, 2304
BtsI GCAGTG 1 cut(s) 1149
BtsIMutI CAGTG 3 cut(s) 254, 933, 1149
BveI ACCTGC 2 cut(s) 1987, 2015
Cac8I GCNNGC 7 cut(s) 172, 436, 1398, 1956, 2018, 2441, 2667
CaiI CAGNNNCTG 1 cut(s) 2007
CciI TCATGA 1 cut(s) 1773
CfoI GCGC 3 cut(s) 270, 541, 2282
Cfr13I GGNCC 7 cut(s) 1162, 1285, 1750, 1780, 1916, 1993, 2631
Csp6I GTAC 7 cut(s) 279, 548, 1116, 1333, 1497, 1520, 2246
CviQI GTAC 7 cut(s) 279, 548, 1116, 1333, 1497, 1520, 2246
DraI TTTAAA 1 cut(s) 1426
DrdI GACNNNNNNGTC 1 cut(s) 114
DseDI GACNNNNNNGTC 1 cut(s) 114
EaeI YGGCCR 1 cut(s) 2018
Eam1104I CTCTTC 6 cut(s) 217, 297, 684, 1400, 2139, 2245
EarI CTCTTC 6 cut(s) 217, 297, 684, 1400, 2139, 2245
Ecl136II GAGCTC 1 cut(s) 1322
Eco130I CCWWGG 5 cut(s) 284, 892, 1452, 2416, 2627
Eco24I GRGCYC 2 cut(s) 368, 1324
Eco31I GGTCTC 3 cut(s) 1518, 1618, 1684
Eco32I GATATC 2 cut(s) 522, 1885
Eco47I GGWCC 4 cut(s) 1162, 1285, 1780, 2631
Eco47III AGCGCT 1 cut(s) 2281
Eco53kI GAGCTC 1 cut(s) 1322
Eco57I CTGAAG 3 cut(s) 704, 1773, 2226
Eco81I CCTNAGG 1 cut(s) 2268
Eco88I CYCGRG 2 cut(s) 1317, 2702
EcoICRI GAGCTC 1 cut(s) 1322
EcoNI CCTNNNNNAGG 1 cut(s) 1788
EcoO109I RGGNCCY 3 cut(s) 1285, 1750, 1993
EcoRI GAATTC 2 cut(s) 915, 2262
EcoRII CCWGG 6 cut(s) 996, 1274, 1502, 1507, 1531, 1627
EcoRV GATATC 2 cut(s) 522, 1885
EcoT14I CCWWGG 5 cut(s) 284, 892, 1452, 2416, 2627
EcoT22I ATGCAT 2 cut(s) 940, 2412
EcoT38I GRGCYC 2 cut(s) 368, 1324
ErhI CCWWGG 5 cut(s) 284, 892, 1452, 2416, 2627
Esp3I CGTCTC 1 cut(s) 2498
FaqI GGGAC 4 cut(s) 228, 1271, 2173, 2684
FauI CCCGC 1 cut(s) 1668
FauNDI CATATG 3 cut(s) 940, 965, 2184
FbaI TGATCA 3 cut(s) 529, 1636, 1726
FblI GTMKAC 2 cut(s) 1122, 1909
Fnu4HI GCNGC 4 cut(s) 1230, 2032, 2283, 2454
FokI GGATG 9 cut(s) 567, 812, 1157, 1232, 1359, 1487, 1505, 1515, 2291
FriOI GRGCYC 2 cut(s) 368, 1324
Fsp4HI GCNGC 4 cut(s) 1230, 2032, 2283, 2454
FspBI CTAG 6 cut(s) 285, 618, 1043, 1091, 1175, 1998
GlaI GCGC 3 cut(s) 269, 540, 2281
GluI GCNGC 4 cut(s) 1230, 2032, 2283, 2454
GsuI CTGGAG 3 cut(s) 1308, 2270, 2443
HaeII RGCGCY 1 cut(s) 2283
HaeIII GGCC 5 cut(s) 1507, 1751, 1918, 1994, 2020
HapII CCGG 2 cut(s) 1469, 2685
HhaI GCGC 3 cut(s) 270, 541, 2282
Hin6I GCGC 3 cut(s) 268, 539, 2280
HinP1I GCGC 3 cut(s) 268, 539, 2280
HincII GTYRAC 3 cut(s) 954, 1123, 1720
HindII GTYRAC 3 cut(s) 954, 1123, 1720
HindIII AAGCTT 1 cut(s) 72
HinfI GANTC 5 cut(s) 349, 461, 576, 779, 1540
HpaII CCGG 2 cut(s) 1469, 2685
HphI GGTGA 3 cut(s) 140, 308, 1631
Hpy166II GTNNAC 7 cut(s) 107, 954, 1123, 1720, 1910, 2434, 2653
Hpy8I GTNNAC 7 cut(s) 107, 954, 1123, 1720, 1910, 2434, 2653
HpyCH4III ACNGT 5 cut(s) 1120, 1162, 1565, 1724, 2657
HpyCH4IV ACGT 2 cut(s) 497, 2274
HpyF10VI GCNNNNNNNGC 3 cut(s) 71, 1664, 2007
HpySE526I ACGT 2 cut(s) 497, 2274
HspAI GCGC 3 cut(s) 268, 539, 2280
KflI GGGWCCC 1 cut(s) 1285
Kpn2I TCCGGA 1 cut(s) 1468
Ksp22I TGATCA 3 cut(s) 529, 1636, 1726
LmnI GCTCC 4 cut(s) 1327, 1705, 2476, 2593
Lsp1109I GCAGC 4 cut(s) 1216, 2018, 2269, 2440
LweI GCATC 8 cut(s) 279, 346, 925, 1317, 1662, 1963, 2294, 2397
MaeI CTAG 6 cut(s) 285, 618, 1043, 1091, 1175, 1998
MaeII ACGT 2 cut(s) 497, 2274
MaeIII GTNAC 3 cut(s) 1556, 1590, 2377
MbiI CCGCTC 1 cut(s) 2596
MfeI CAATTG 1 cut(s) 2011
MflI RGATCY 4 cut(s) 159, 511, 993, 2426
MhlI GDGCHC 3 cut(s) 368, 1324, 2518
MlsI TGGCCA 1 cut(s) 2020
MluNI TGGCCA 1 cut(s) 2020
MlyI GAGTC 1 cut(s) 585
MmeI TCCRAC 2 cut(s) 904, 1909
Mox20I TGGCCA 1 cut(s) 2020
Mph1103I ATGCAT 2 cut(s) 940, 2412
MroI TCCGGA 1 cut(s) 1468
MroXI GAANNNNTTC 1 cut(s) 717
MscI TGGCCA 1 cut(s) 2020
MseI TTAA 4 cut(s) 405, 1425, 1437, 2403
MslI CAYNNNNRTG 3 cut(s) 405, 429, 2415
Msp20I TGGCCA 1 cut(s) 2020
MspA1I CMGCKG 2 cut(s) 1265, 2319
MspI CCGG 2 cut(s) 1469, 2685
MspR9I CCNGG 7 cut(s) 998, 1276, 1504, 1509, 1533, 1629, 2686
MunI CAATTG 1 cut(s) 2011
Mva1269I GAATGC 3 cut(s) 438, 1669, 2068
MvaI CCWGG 6 cut(s) 998, 1276, 1504, 1509, 1533, 1629
MwoI GCNNNNNNNGC 3 cut(s) 71, 1664, 2007
NciI CCSGG 1 cut(s) 2686
NcoI CCATGG 2 cut(s) 1452, 2416
NdeI CATATG 3 cut(s) 940, 965, 2184
NsiI ATGCAT 2 cut(s) 940, 2412
NspI RCATGY 4 cut(s) 539, 1209, 2129, 2443
PaeI GCATGC 1 cut(s) 2443
PaeR7I CTCGAG 1 cut(s) 1317
PagI TCATGA 1 cut(s) 1773
PaqCI CACCTGC 1 cut(s) 1987
PctI GAATGC 3 cut(s) 438, 1669, 2068
PdmI GAANNNNTTC 1 cut(s) 717
PfeI GAWTC 4 cut(s) 349, 461, 779, 1540
PflFI GACNNNGTC 1 cut(s) 2550
PflMI CCANNNNNTGG 1 cut(s) 1281
PfoI TCCNGGA 2 cut(s) 996, 1274
PkrI GCNGC 4 cut(s) 1231, 2033, 2284, 2455
PleI GAGTC 1 cut(s) 584
PpsI GAGTC 1 cut(s) 584
PpuMI RGGWCCY 1 cut(s) 1285
PshAI GACNNNNGTC 1 cut(s) 959
PshBI ATTAAT 1 cut(s) 1437
Psp124BI GAGCTC 1 cut(s) 1324
Psp5II RGGWCCY 1 cut(s) 1285
Psp6I CCWGG 6 cut(s) 996, 1274, 1502, 1507, 1531, 1627
PspGI CCWGG 6 cut(s) 996, 1274, 1502, 1507, 1531, 1627
PspPI GGNCC 7 cut(s) 1162, 1285, 1750, 1780, 1916, 1993, 2631
PspPPI RGGWCCY 1 cut(s) 1285
PspXI VCTCGAGB 1 cut(s) 1317
PstNI CAGNNNCTG 1 cut(s) 2007
PsuI RGATCY 4 cut(s) 159, 511, 993, 2426
PsyI GACNNNGTC 1 cut(s) 2550
PvuII CAGCTG 2 cut(s) 1265, 2319
RsaI GTAC 7 cut(s) 280, 549, 1117, 1334, 1498, 1521, 2247
RsaNI GTAC 7 cut(s) 279, 548, 1116, 1333, 1497, 1520, 2246
RseI CAYNNNNRTG 3 cut(s) 405, 429, 2415
SacI GAGCTC 1 cut(s) 1324
SalI GTCGAC 1 cut(s) 1121
SaqAI TTAA 4 cut(s) 405, 1425, 1437, 2403
SatI GCNGC 4 cut(s) 1230, 2032, 2283, 2454
Sau96I GGNCC 7 cut(s) 1162, 1285, 1750, 1780, 1916, 1993, 2631
ScaI AGTACT 1 cut(s) 2247
SchI GAGTC 1 cut(s) 585
ScrFI CCNGG 7 cut(s) 998, 1276, 1504, 1509, 1533, 1629, 2686
SduI GDGCHC 3 cut(s) 368, 1324, 2518
SfaNI GCATC 8 cut(s) 279, 346, 925, 1317, 1662, 1963, 2294, 2397
SfcI CTRYAG 2 cut(s) 196, 2656
Sfr274I CTCGAG 1 cut(s) 1317
SinI GGWCC 4 cut(s) 1162, 1285, 1780, 2631
SlaI CTCGAG 1 cut(s) 1317
SmiMI CAYNNNNRTG 3 cut(s) 405, 429, 2415
SmlI CTYRAG 2 cut(s) 1317, 2539
SmoI CTYRAG 2 cut(s) 1317, 2539
SphI GCATGC 1 cut(s) 2443
SsiI CCGC 4 cut(s) 417, 1675, 2509, 2596
SspI AATATT 1 cut(s) 2140
SspMI CTAG 6 cut(s) 285, 618, 1043, 1091, 1175, 1998
SstI GAGCTC 1 cut(s) 1324
StyD4I CCNGG 7 cut(s) 996, 1274, 1502, 1507, 1531, 1627, 2684
StyI CCWWGG 5 cut(s) 284, 892, 1452, 2416, 2627
TaaI ACNGT 5 cut(s) 1120, 1162, 1565, 1724, 2657
TaiI ACGT 2 cut(s) 500, 2277
TaqI TCGA 7 cut(s) 373, 682, 1122, 1182, 1194, 1311, 1318
TaqII GACCGA 1 cut(s) 1857
TatI WGTACW 2 cut(s) 1115, 2245
TfiI GAWTC 4 cut(s) 349, 461, 779, 1540
Tru1I TTAA 4 cut(s) 405, 1425, 1437, 2403
Tru9I TTAA 4 cut(s) 405, 1425, 1437, 2403
TscAI CASTG 3 cut(s) 254, 933, 1156
TseI GCWGC 4 cut(s) 1229, 2031, 2282, 2453
TspRI CASTG 3 cut(s) 254, 933, 1156
Tth111I GACNNNGTC 1 cut(s) 2550
Van91I CCANNNNNTGG 1 cut(s) 1281
VpaK11BI GGWCC 4 cut(s) 1162, 1285, 1780, 2631
VspI ATTAAT 1 cut(s) 1437
XagI CCTNNNNNAGG 1 cut(s) 1788
XapI RAATTY 7 cut(s) 915, 1379, 1421, 2210, 2262, 2532, 2690
XceI RCATGY 4 cut(s) 539, 1209, 2129, 2443
XcmI CCANNNNNNNNNTGG 3 cut(s) 407, 1649, 1829
XhoI CTCGAG 1 cut(s) 1317
XmaJI CCTAGG 1 cut(s) 284
XmiI GTMKAC 2 cut(s) 1122, 1909
XmnI GAANNNNTTC 1 cut(s) 717
XspI CTAG 6 cut(s) 285, 618, 1043, 1091, 1175, 1998
ZrmI AGTACT 1 cut(s) 2247
Zsp2I ATGCAT 2 cut(s) 940, 2412
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.