MD15G1340200.v1.1

Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
Physical Location & Seq
Reverse (-)
38480014 .. 38486874
6861 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1340200.v1.1.491

Sequence Viewer

Length: 3294 bp
ATGGACACAAGAGGAAGACTTGTTGCTGGTTCTCATAACAGGAACGAGTTTGTGCTCATCAATGCAGATGAAAATTCACGGATACAGCCTGTGCAAGAATTAAGTGGGCAAATATGTCAAATTTGTGGAGATGAGATTGAACTTACAGTTGATGGAGAGCCCTTTGTTGCCTGCAACGAATGTGCTTTCCCTGTGTGCAGACCTTGTTATGAGTATGAGAGAAGAGAAGGAAATCAGGCTTGTCCTCATTGTAAAACCAGATACAAACGCATCAGAGGTAGTCCTAGGGTTGAAGGTGACGAAGAAGAAGATGACATTGATGATTTGGACAATGAGTTCAATTGTGGGAATCTTGATGCCTTGGGCCCTCATCAAGTTGCTGAGTCTGTGCTGTCTGCACGCCTTAATGTTGGCCGCGGTTCCAACTACAATGCCAGAATTCCCGCACATTCAGAACATGAATCCTCTCCTTTGGGTTCTGAAATCCCACTCTTGACCTATGGTGAAGAGGACACTGAAATTTCTTCCAATCGACATGCTCTTATTGTACCTCCGTATATGGATCATGGAAACAGAGTCCATCCAATGCCTTTTTCTGATCCCTCTTCTTTGGAACCTAGACCAATGGTCCCTAAGAAAGACATTGCAGTGTATGGGTATGGGAGTGTAGCGTGGAAAGACCGAATGGAGGAGTGGAAGAAAAAGCAGAATGAAAAACTTCAGGTTGTAAAGCATGAAGGAGTTAGCGATGGAGGAAACTGTGGTGGGAATGATGAACTGGATGATTCTGACCTACCCATGATGGATGAAGGCAGGCAGCCACTTTCAAGAAAGTTGCCCATCCCGTCAAGCAAGATAAATCCATACAGAATGATAATAATACTCCGCCTTGTAATACTTGGCTTATTCTTTCATTATAGAATCCTCCATCCAGTTAATAATGCATATGGCTTGTGGTTGACATCAGTCATATGTGAAATATGGTTTGCTATATCATGGATTCTGGATCAATTCCCCAAATGGCATCCAATAAAGCGAGAAACATACCTAGATCGACTATCGCTTAGGTATGAAAAAGAAGGGAAGCCATCTGAATTAGCCAGTGTAGACATATTTGTTAGTACAGTTGACCCTCTGAAAGAACCTCCACTAATCACTGCAAACACGGTTCTGTCCATCCTTGCGGTTGACTATCCAGTTGAGAAAGTTGCGTGCTATGTCTCGGATGATGGTGCTGCCATGCTTACTTTTGAAGCTCTCTCTGAGACATCTGAGTTTGCCAGGAAATGGGTTCCTTTTTGTAAGAAGTTTAGTATTGAGCCCCGAGCCCCAGAATGGTATTTCTGTCAAAAGATTGACTATTTGAAAAACAAAGTTCATCCAGCATTTGTAAGGGAAAGACGTGCAATGAAGAGAGAATATGAAGAATTTAAAGTTAGGATCAATGGTTTGGTAGCCTTGGCACAAAAGGTTCCTGAGGATGGCTGGACAATGCAGGATGGGACTCCCTGGCCCGGGAATAATGTACGAGACCATCCTGGCATGATTCAGGTCTTTCTGGGTAACAATGGTGTTCATGATGTTGAAGGATATGAGTTACCTCATCTAATTTATGTTTCTCGTGAAAAGAGACCAGGGTTTGATCACCATAAAAAGGCCGGTGCAATGAATGCTCTAATTCGGGTCTCAGCAATTATCTCAAATGCTCCTTATATTCTTAATGTTGACTGTGATCACTACATCAACAATAGCAAGGCAATCAGAGAAGCTATGTGTTTCATGATGGACCCTACATCAGGGAAGAAAGTTTGCTACGTGCAGTTCCCTCAAAGATTTGATGGGATTGATCATCATGATAGATACTCAAATCGGAATGTTGTATTCTTTGATATCAACATGAAAGGGTTAGATGGTATACAAGGACCAATATATGTTGGAACTGGGTGTGTTTTCAGAAGGCAAGCGCTTTATGGATATGATGCTCCTACCAAAAAGAAACCCCCTAGAAAAACCTGCAATTGCTGGCCAAAATGGTGCTGCCTGTGTTGTGGATCTAGAAAGAACAAGAATGCAAAGTCAAAGAAAGAGAAAAAGAAAAAATTGAAACAGAGGGAAGCATCAAAGCAGATACATGCACTTGAAAATATTGAAGAGGGAATTGAAGAACTAAAAGCCAATAAAACATCCACCATGTCCCAACTGAAATTGGAGAAGAAATTTGGACAGTCTCCAGTTTTTGTAGCCTCTGCAGTTTTGGAAAATGGTGGAATACCTCAGGATGTCAGTCCTGCATCGCTCTTGAAAGAAGCCATCCAAGTGATAAGCTGTGGTTATGAAGATAAAACAGAATGGGGAAAGGAAGTTGGCTGGATATATGGTTCTGTTACTGAGGATATTCTAACAGGATTTAAGATGCACTGCCATGGATGGCGGTCTGTCTACTGCATACCCAAACGTCCAGCATTCAAAGGATCAGCTCCTATTAACCTTTCTGATCGTTTAAATCAAGTTCTTCGGTGGGCCCTTGGATCTGTTGAGATCTTCCTTAGTAGACATTGCCCAATCTGGTATGCATATGGGAGTGGATTGAAATGGTTGGAACGATTTTCGTATATAAACTCAGTTGTATATCCGTGGACCTCCATTCCCTTGATCGTTTATTGTAGTCTACCAGCCATCTGTCTTCTGACTGGGAAATTCATTGTCCCTGAGATAAGCAACTATGCCAGCATTATTTTCATGGCTCTCTTCATATCCATAGCTGCAACTGGTATCCTTGAGATGCAATGGGGTGGCGTCGGGATTGATGACTGGTGGAGAAATGAGCAGTTCTGGGTAATTGGAGGCGCTTCGTCACATCTTTTTGCTCTGTTCCAGGGTCTACTCAAGGTTTTGGCTGGTGTTAACACAAGCTTCACAGTTACATCGAAGGCAGCAGATGATGGAGCATTTTCCGAACTTTACATCTTCAAGTGGACATCATTATTGATCCCTCCTACAACTTTATTAATAATAAACATAGTTGGGGTTGTCGTGGGCATTTCAGACGCCATCAATAACGGGTATGATTCATGGGGTCCGTTGTTTGGTCGGCTATTTTTTGCCTTCTGGGTCATTGTGCATCTCTACCCCTTCCTCAAGGGATTGCTGGGGAAACAAGATAGGATGCCCACCATCGTTGTGGTTTGGTCCATTCTACTGGCGTCAATATTAACTCTTATGTGGGTTCGAATCAATCCCTTTGTGTCAAAAGATGGCCCCGTATTGGAGGTTTGCGGGTTAAATTGCGATTAG

Protein Analysis

1098

Amino Acids

124.01

Weight (kDa)

6.84

Isoelectric Point (pI)

37.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-UDP PF14569 30 - 105 6e-42 Zinc-binding RING-finger
Cellulose_synt PF03552 369 - 1085 0.0 Cellulose synthase
Glyco_trans_2_3 PF13632 787 - 894 1.6e-07 Glycosyl transferase family group 2
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 2021
AccB7I CCANNNNNTGG 1 cut(s) 1287
AccI GTMKAC 6 cut(s) 1107, 1915, 2439, 2551, 2668, 2881
AccII CGCG 1 cut(s) 417
AciI CCGC 7 cut(s) 415, 417, 444, 886, 1184, 2431, 3276
AclWI GGATC 8 cut(s) 570, 593, 1014, 1448, 2059, 2479, 2536, 2983
AcoI YGGCCR 2 cut(s) 412, 2024
AcsI RAATTY 7 cut(s) 73, 120, 438, 519, 1427, 2216, 2696
AcuI CTGAAG 1 cut(s) 704
AcyI GRCGYC 3 cut(s) 2796, 3048, 3203
AfaI GTAC 3 cut(s) 549, 1123, 1527
AfeI AGCGCT 1 cut(s) 1965
AhdI GACNNNNNGTC 1 cut(s) 626
AjiI CACGTC 1 cut(s) 1403
AjnI CCWGG 5 cut(s) 1280, 1508, 1537, 1633, 2874
AjuI GAANNNNNNNTTGG 2 cut(s) 577, 609
AloI GAACNNNNNNTCC 4 cut(s) 320, 352, 2362, 2394
AluBI AGCT 6 cut(s) 1256, 1769, 2325, 2477, 2762, 2913
AluI AGCT 6 cut(s) 1256, 1769, 2325, 2477, 2762, 2913
Alw21I GWGCWC 1 cut(s) 57
Alw26I GTCTC 6 cut(s) 1225, 1259, 1524, 1624, 1690, 2232
AlwI GGATC 8 cut(s) 570, 593, 1014, 1448, 2059, 2479, 2536, 2983
Ama87I CYCGRG 2 cut(s) 1323, 1514
Aor51HI AGCGCT 1 cut(s) 1965
AoxI GGCC 7 cut(s) 364, 412, 1511, 1656, 2024, 2520, 3256
ApaI GGGCCC 2 cut(s) 368, 2524
ApeKI GCWGC 5 cut(s) 817, 1235, 2037, 2762, 2933
ApoI RAATTY 7 cut(s) 73, 120, 438, 519, 1427, 2216, 2696
AseI ATTAAT 1 cut(s) 3008
Asp700I GAANNNNTTC 1 cut(s) 717
AspA2I CCTAGG 1 cut(s) 284
AspLEI GCGC 2 cut(s) 1966, 2849
AsuC2I CCSGG 2 cut(s) 1515, 1516
AsuHPI GGTGA 3 cut(s) 308, 515, 1637
AsuII TTCGAA 1 cut(s) 3229
AvaI CYCGRG 2 cut(s) 1323, 1514
AvaII GGWCC 6 cut(s) 628, 1786, 1922, 2637, 3077, 3189
AvrII CCTAGG 1 cut(s) 284
AxyI CCTNAGG 2 cut(s) 1476, 2274
BaeGI GKGCMC 2 cut(s) 368, 2524
BalI TGGCCA 1 cut(s) 2026
BanII GRGCYC 5 cut(s) 162, 368, 1323, 1330, 2524
BauI CACGAG 1 cut(s) 1620
BbsI GAAGAC 2 cut(s) 22, 2675
Bbv12I GWGCWC 1 cut(s) 57
BbvI GCAGC 5 cut(s) 829, 1222, 2024, 2749, 2945
BciT130I CCWGG 5 cut(s) 1282, 1510, 1539, 1635, 2876
BciVI GTATCC 2 cut(s) 75, 2783
BclI TGATCA 3 cut(s) 1642, 1732, 1846
BcnI CCSGG 2 cut(s) 1515, 1516
BcoDI GTCTC 6 cut(s) 1225, 1259, 1524, 1624, 1690, 2232
BfaI CTAG 5 cut(s) 285, 618, 1049, 2004, 2055
BfmI CTRYAG 1 cut(s) 2247
BfoI RGCGCY 2 cut(s) 1967, 2850
BfuAI ACCTGC 1 cut(s) 2021
BfuI GTATCC 2 cut(s) 75, 2783
BglII AGATCT 1 cut(s) 2538
BisI GCNGC 6 cut(s) 415, 818, 1236, 2038, 2763, 2934
BlnI CCTAGG 1 cut(s) 284
BlsI GCNGC 6 cut(s) 416, 819, 1237, 2039, 2764, 2935
Bme1390I CCNGG 7 cut(s) 1282, 1510, 1515, 1516, 1539, 1635, 2876
Bme18I GGWCC 6 cut(s) 628, 1786, 1922, 2637, 3077, 3189
BmeRI GACNNNNNGTC 1 cut(s) 626
BmeT110I CYCGRG 2 cut(s) 1323, 1514
BmgBI CACGTC 1 cut(s) 1403
BmrFI CCNGG 7 cut(s) 1282, 1510, 1515, 1516, 1539, 1635, 2876
BmrI ACTGGG 2 cut(s) 1950, 2700
BmuI ACTGGG 2 cut(s) 1950, 2700
BoxI GACNNNNGTC 1 cut(s) 965
BpiI GAAGAC 2 cut(s) 22, 2675
BpmI CTGGAG 1 cut(s) 2214
Bpu10I CCTNAGC 1 cut(s) 1064
Bpu14I TTCGAA 1 cut(s) 3229
BpuEI CTTGAG 3 cut(s) 2798, 2870, 3122
BpuMI CCSGG 2 cut(s) 1515, 1516
BsaAI YACGTR 1 cut(s) 1816
BsaHI GRCGYC 3 cut(s) 2796, 3048, 3203
BsaI GGTCTC 3 cut(s) 1524, 1624, 1690
Bse118I RCCGGY 1 cut(s) 1658
Bse21I CCTNAGG 2 cut(s) 1476, 2274
Bse3DI GCAATG 5 cut(s) 642, 1413, 1671, 2554, 2792
BseBI CCWGG 5 cut(s) 1282, 1510, 1539, 1635, 2876
BseMI GCAATG 5 cut(s) 642, 1413, 1671, 2554, 2792
BseMII CTCAG 9 cut(s) 372, 1254, 1263, 1467, 1701, 2288, 2379, 2634, 2700
BseRI GAGGAG 1 cut(s) 704
BseSI GKGCMC 2 cut(s) 368, 2524
BseXI GCAGC 5 cut(s) 829, 1222, 2024, 2749, 2945
BseYI CCCAGC 1 cut(s) 3148
BsgI GTGCAG 3 cut(s) 217, 381, 1838
Bsh1236I CGCG 1 cut(s) 417
BshFI GGCC 7 cut(s) 366, 414, 1513, 1658, 2026, 2522, 3258
BsiHKAI GWGCWC 1 cut(s) 57
BsiHKCI CYCGRG 2 cut(s) 1323, 1514
BsiSI CCGG 2 cut(s) 1515, 1659
BslFI GGGAC 4 cut(s) 614, 1516, 2179, 2690
BsmAI GTCTC 6 cut(s) 1225, 1259, 1524, 1624, 1690, 2232
BsmFI GGGAC 4 cut(s) 614, 1516, 2179, 2690
BsmI GAATGC 3 cut(s) 1675, 2074, 2462
BsnI GGCC 7 cut(s) 366, 414, 1513, 1658, 2026, 2522, 3258
Bso31I GGTCTC 3 cut(s) 1524, 1624, 1690
BsoBI CYCGRG 2 cut(s) 1323, 1514
Bsp119I TTCGAA 1 cut(s) 3229
Bsp120I GGGCCC 2 cut(s) 364, 2520
Bsp1286I GDGCHC 6 cut(s) 57, 162, 368, 1323, 1330, 2524
Bsp19I CCATGG 1 cut(s) 2422
BspACI CCGC 7 cut(s) 415, 417, 444, 886, 1184, 2431, 3276
BspANI GGCC 7 cut(s) 366, 414, 1513, 1658, 2026, 2522, 3258
BspCNI CTCAG 9 cut(s) 373, 1255, 1264, 1468, 1700, 2287, 2380, 2633, 2701
BspFNI CGCG 1 cut(s) 417
BspHI TCATGA 3 cut(s) 1576, 1779, 1852
BspMAI CTGCAG 1 cut(s) 2251
BspMI ACCTGC 1 cut(s) 2021
BspPI GGATC 8 cut(s) 570, 593, 1014, 1448, 2059, 2479, 2536, 2983
BspT104I TTCGAA 1 cut(s) 3229
BspTNI GGTCTC 3 cut(s) 1524, 1624, 1690
BsrDI GCAATG 5 cut(s) 642, 1413, 1671, 2554, 2792
BsrFI RCCGGY 1 cut(s) 1658
BssAI RCCGGY 1 cut(s) 1658
BssNAI GTATAC 1 cut(s) 1916
BssNI GRCGYC 3 cut(s) 2796, 3048, 3203
BssSI CACGAG 1 cut(s) 1620
BssT1I CCWWGG 5 cut(s) 284, 360, 1458, 2422, 2524
Bst1107I GTATAC 1 cut(s) 1916
Bst2BI CACGAG 1 cut(s) 1620
Bst2UI CCWGG 5 cut(s) 1282, 1510, 1539, 1635, 2876
Bst4CI ACNGT 7 cut(s) 148, 761, 1126, 1168, 1730, 2226, 2920
Bst6I CTCTTC 6 cut(s) 217, 501, 610, 1406, 2145, 2753
BstACI GRCGYC 3 cut(s) 2796, 3048, 3203
BstAPI GCANNNNNTGC 1 cut(s) 1670
BstBAI YACGTR 1 cut(s) 1816
BstBI TTCGAA 1 cut(s) 3229
BstC8I GCNNGC 7 cut(s) 172, 400, 815, 1213, 1962, 2024, 2728
BstDSI CCRYGG 3 cut(s) 415, 2422, 2633
BstENI CCTNNNNNAGG 1 cut(s) 1794
BstFNI CGCG 1 cut(s) 417
BstH2I RGCGCY 2 cut(s) 1967, 2850
BstHHI GCGC 2 cut(s) 1966, 2849
BstMAI GTCTC 6 cut(s) 1225, 1259, 1524, 1624, 1690, 2232
BstMWI GCNNNNNNNGC 1 cut(s) 1670
BstNI CCWGG 5 cut(s) 1282, 1510, 1539, 1635, 2876
BstNSI RCATGY 2 cut(s) 539, 2135
BstPAI GACNNNNGTC 1 cut(s) 965
BstSCI CCNGG 7 cut(s) 1280, 1508, 1513, 1514, 1537, 1633, 2874
BstSFI CTRYAG 1 cut(s) 2247
BstSLI GKGCMC 2 cut(s) 368, 2524
BstUI CGCG 1 cut(s) 417
BstV1I GCAGC 5 cut(s) 829, 1222, 2024, 2749, 2945
BstV2I GAAGAC 2 cut(s) 22, 2675
BstX2I RGATCY 3 cut(s) 2051, 2528, 2538
BstXI CCANNNNNNTGG 2 cut(s) 3181, 3199
BstYI RGATCY 3 cut(s) 2051, 2528, 2538
BstZ17I GTATAC 1 cut(s) 1916
Bsu36I CCTNAGG 2 cut(s) 1476, 2274
BsuI GTATCC 2 cut(s) 75, 2783
BsuRI GGCC 7 cut(s) 366, 414, 1513, 1658, 2026, 2522, 3258
BtgI CCRYGG 3 cut(s) 415, 2422, 2633
BtgZI GCGATG 2 cut(s) 762, 2277
BtrI CACGTC 1 cut(s) 1403
BtsI GCAGTG 3 cut(s) 654, 1155, 2416
BtsIMutI CAGTG 5 cut(s) 513, 654, 1108, 1155, 2416
BveI ACCTGC 1 cut(s) 2021
Cac8I GCNNGC 7 cut(s) 172, 400, 815, 1213, 1962, 2024, 2728
CciI TCATGA 3 cut(s) 1576, 1779, 1852
CfoI GCGC 2 cut(s) 1966, 2849
Cfr10I RCCGGY 1 cut(s) 1658
Cfr42I CCGCGG 1 cut(s) 418
Cfr9I CCCGGG 1 cut(s) 1514
CseI GACGC 3 cut(s) 2785, 3056, 3192
Csp6I GTAC 3 cut(s) 548, 1122, 1526
CspCI CAANNNNNGTGG 2 cut(s) 3160, 3195
CviQI GTAC 3 cut(s) 548, 1122, 1526
DraI TTTAAA 2 cut(s) 1432, 2502
DriI GACNNNNNGTC 1 cut(s) 626
EaeI YGGCCR 2 cut(s) 412, 2024
Eam1104I CTCTTC 6 cut(s) 217, 501, 610, 1406, 2145, 2753
Eam1105I GACNNNNNGTC 1 cut(s) 626
EarI CTCTTC 6 cut(s) 217, 501, 610, 1406, 2145, 2753
EciI GGCGGA 1 cut(s) 875
Eco130I CCWWGG 5 cut(s) 284, 360, 1458, 2422, 2524
Eco24I GRGCYC 5 cut(s) 162, 368, 1323, 1330, 2524
Eco31I GGTCTC 3 cut(s) 1524, 1624, 1690
Eco32I GATATC 1 cut(s) 1891
Eco47I GGWCC 6 cut(s) 628, 1786, 1922, 2637, 3077, 3189
Eco47III AGCGCT 1 cut(s) 1965
Eco57I CTGAAG 1 cut(s) 704
Eco81I CCTNAGG 2 cut(s) 1476, 2274
Eco88I CYCGRG 2 cut(s) 1323, 1514
EcoNI CCTNNNNNAGG 1 cut(s) 1794
EcoO109I RGGNCCY 2 cut(s) 365, 2521
EcoRI GAATTC 1 cut(s) 438
EcoRII CCWGG 5 cut(s) 1280, 1508, 1537, 1633, 2874
EcoRV GATATC 1 cut(s) 1891
EcoT14I CCWWGG 5 cut(s) 284, 360, 1458, 2422, 2524
EcoT22I ATGCAT 2 cut(s) 946, 2575
EcoT38I GRGCYC 5 cut(s) 162, 368, 1323, 1330, 2524
ErhI CCWWGG 5 cut(s) 284, 360, 1458, 2422, 2524
FaqI GGGAC 4 cut(s) 614, 1516, 2179, 2690
FauI CCCGC 2 cut(s) 451, 3269
FauNDI CATATG 3 cut(s) 946, 971, 2575
FbaI TGATCA 3 cut(s) 1642, 1732, 1846
FblI GTMKAC 6 cut(s) 1107, 1915, 2439, 2551, 2668, 2881
Fnu4HI GCNGC 6 cut(s) 415, 818, 1236, 2038, 2763, 2934
FriOI GRGCYC 5 cut(s) 162, 368, 1323, 1330, 2524
Fsp4HI GCNGC 6 cut(s) 415, 818, 1236, 2038, 2763, 2934
FspBI CTAG 5 cut(s) 285, 618, 1049, 2004, 2055
GlaI GCGC 2 cut(s) 1965, 2848
GluI GCNGC 6 cut(s) 415, 818, 1236, 2038, 2763, 2934
GsaI CCCAGC 1 cut(s) 3152
GsuI CTGGAG 1 cut(s) 2214
HaeII RGCGCY 2 cut(s) 1967, 2850
HaeIII GGCC 7 cut(s) 366, 414, 1513, 1658, 2026, 2522, 3258
HapII CCGG 2 cut(s) 1515, 1659
HgaI GACGC 3 cut(s) 2785, 3056, 3192
HhaI GCGC 2 cut(s) 1966, 2849
Hin1I GRCGYC 3 cut(s) 2796, 3048, 3203
Hin6I GCGC 2 cut(s) 1964, 2847
HinP1I GCGC 2 cut(s) 1964, 2847
HincII GTYRAC 5 cut(s) 960, 1129, 1189, 1726, 2905
HindII GTYRAC 5 cut(s) 960, 1129, 1189, 1726, 2905
HindIII AAGCTT 1 cut(s) 2911
HpaI GTTAAC 1 cut(s) 2905
HpaII CCGG 2 cut(s) 1515, 1659
HphI GGTGA 3 cut(s) 308, 515, 1637
Hpy99I CGWCG 1 cut(s) 2801
HpyCH4III ACNGT 7 cut(s) 148, 761, 1126, 1168, 1730, 2226, 2920
HpyCH4IV ACGT 3 cut(s) 1402, 1815, 2455
HpyF10VI GCNNNNNNNGC 1 cut(s) 1670
HpySE526I ACGT 3 cut(s) 1402, 1815, 2455
Hsp92I GRCGYC 3 cut(s) 2796, 3048, 3203
HspAI GCGC 2 cut(s) 1964, 2847
Ksp22I TGATCA 3 cut(s) 1642, 1732, 1846
KspAI GTTAAC 1 cut(s) 2905
KspI CCGCGG 1 cut(s) 418
LmnI GCTCC 4 cut(s) 1711, 1987, 2482, 2945
Lsp1109I GCAGC 5 cut(s) 829, 1222, 2024, 2749, 2945
MaeI CTAG 5 cut(s) 285, 618, 1049, 2004, 2055
MaeII ACGT 3 cut(s) 1402, 1815, 2455
MaeIII GTNAC 6 cut(s) 296, 1562, 1596, 2383, 2853, 2920
MfeI CAATTG 2 cut(s) 340, 2017
MflI RGATCY 3 cut(s) 2051, 2528, 2538
MhlI GDGCHC 6 cut(s) 57, 162, 368, 1323, 1330, 2524
MlsI TGGCCA 1 cut(s) 2026
MluNI TGGCCA 1 cut(s) 2026
MlyI GAGTC 3 cut(s) 392, 585, 1498
MmeI TCCRAC 3 cut(s) 447, 1915, 2577
Mox20I TGGCCA 1 cut(s) 2026
Mph1103I ATGCAT 2 cut(s) 946, 2575
MroXI GAANNNNTTC 1 cut(s) 717
MscI TGGCCA 1 cut(s) 2026
MslI CAYNNNNRTG 4 cut(s) 647, 2315, 2421, 3179
Msp20I TGGCCA 1 cut(s) 2026
MspA1I CMGCKG 1 cut(s) 417
MspI CCGG 2 cut(s) 1515, 1659
MspR9I CCNGG 7 cut(s) 1282, 1510, 1515, 1516, 1539, 1635, 2876
MunI CAATTG 2 cut(s) 340, 2017
Mva1269I GAATGC 3 cut(s) 1675, 2074, 2462
MvaI CCWGG 5 cut(s) 1282, 1510, 1539, 1635, 2876
MvnI CGCG 1 cut(s) 417
MwoI GCNNNNNNNGC 1 cut(s) 1670
NciI CCSGG 2 cut(s) 1515, 1516
NcoI CCATGG 1 cut(s) 2422
NdeI CATATG 3 cut(s) 946, 971, 2575
NmuCI GTSAC 2 cut(s) 296, 2853
NsiI ATGCAT 2 cut(s) 946, 2575
NspI RCATGY 2 cut(s) 539, 2135
NspV TTCGAA 1 cut(s) 3229
PagI TCATGA 3 cut(s) 1576, 1779, 1852
PctI GAATGC 3 cut(s) 1675, 2074, 2462
PdmI GAANNNNTTC 1 cut(s) 717
PfeI GAWTC 8 cut(s) 349, 461, 785, 921, 1000, 1546, 3068, 3231
PflMI CCANNNNNTGG 1 cut(s) 1287
PkrI GCNGC 6 cut(s) 416, 819, 1237, 2039, 2764, 2935
PleI GAGTC 3 cut(s) 391, 584, 1498
PpsI GAGTC 3 cut(s) 391, 584, 1498
Ppu21I YACGTR 1 cut(s) 1816
PshAI GACNNNNGTC 1 cut(s) 965
PshBI ATTAAT 1 cut(s) 3008
Psp6I CCWGG 5 cut(s) 1280, 1508, 1537, 1633, 2874
PspFI CCCAGC 1 cut(s) 3148
PspGI CCWGG 5 cut(s) 1280, 1508, 1537, 1633, 2874
PspOMI GGGCCC 2 cut(s) 364, 2520
PstI CTGCAG 1 cut(s) 2251
PsuI RGATCY 3 cut(s) 2051, 2528, 2538
RsaI GTAC 3 cut(s) 549, 1123, 1527
RsaNI GTAC 3 cut(s) 548, 1122, 1526
RseI CAYNNNNRTG 4 cut(s) 647, 2315, 2421, 3179
SacII CCGCGG 1 cut(s) 418
SatI GCNGC 6 cut(s) 415, 818, 1236, 2038, 2763, 2934
SchI GAGTC 3 cut(s) 392, 585, 1498
ScrFI CCNGG 7 cut(s) 1282, 1510, 1515, 1516, 1539, 1635, 2876
SduI GDGCHC 6 cut(s) 57, 162, 368, 1323, 1330, 2524
SfcI CTRYAG 1 cut(s) 2247
Sfr303I CCGCGG 1 cut(s) 418
SfuI TTCGAA 1 cut(s) 3229
SgrBI CCGCGG 1 cut(s) 418
SinI GGWCC 6 cut(s) 628, 1786, 1922, 2637, 3077, 3189
SmaI CCCGGG 1 cut(s) 1516
SmiMI CAYNNNNRTG 4 cut(s) 647, 2315, 2421, 3179
SmlI CTYRAG 3 cut(s) 2777, 2885, 3137
SmoI CTYRAG 3 cut(s) 2777, 2885, 3137
SsiI CCGC 7 cut(s) 415, 417, 444, 886, 1184, 2431, 3276
SspI AATATT 2 cut(s) 2146, 3210
SspMI CTAG 5 cut(s) 285, 618, 1049, 2004, 2055
StyD4I CCNGG 7 cut(s) 1280, 1508, 1513, 1514, 1537, 1633, 2874
StyI CCWWGG 5 cut(s) 284, 360, 1458, 2422, 2524
TaaI ACNGT 7 cut(s) 148, 761, 1126, 1168, 1730, 2226, 2920
TaiI ACGT 3 cut(s) 1405, 1818, 2458
TaqI TCGA 4 cut(s) 532, 1054, 2927, 3229
TaqII GACCGA 1 cut(s) 696
TatI WGTACW 1 cut(s) 1121
TauI GCSGC 1 cut(s) 417
TfiI GAWTC 8 cut(s) 349, 461, 785, 921, 1000, 1546, 3068, 3231
TscAI CASTG 5 cut(s) 520, 654, 1108, 1162, 2423
TseFI GTSAC 2 cut(s) 296, 2853
TseI GCWGC 5 cut(s) 817, 1235, 2037, 2762, 2933
Tsp45I GTSAC 2 cut(s) 296, 2853
TspGWI ACGGA 4 cut(s) 94, 543, 2622, 3069
TspMI CCCGGG 1 cut(s) 1514
TspRI CASTG 5 cut(s) 520, 654, 1108, 1162, 2423
Van91I CCANNNNNTGG 1 cut(s) 1287
VpaK11BI GGWCC 6 cut(s) 628, 1786, 1922, 2637, 3077, 3189
VspI ATTAAT 1 cut(s) 3008
XagI CCTNNNNNAGG 1 cut(s) 1794
XapI RAATTY 7 cut(s) 73, 120, 438, 519, 1427, 2216, 2696
XbaI TCTAGA 1 cut(s) 2054
XceI RCATGY 2 cut(s) 539, 2135
XcmI CCANNNNNNNNNTGG 1 cut(s) 3178
XmaI CCCGGG 1 cut(s) 1514
XmaJI CCTAGG 1 cut(s) 284
XmiI GTMKAC 6 cut(s) 1107, 1915, 2439, 2551, 2668, 2881
XmnI GAANNNNTTC 1 cut(s) 717
XspI CTAG 5 cut(s) 285, 618, 1049, 2004, 2055
Zsp2I ATGCAT 2 cut(s) 946, 2575
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.