MD05G1029400.v1.1

Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
Physical Location & Seq
Forward (+)
4814294 .. 4820585
6292 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1029400.v1.1.491

Sequence Viewer

Length: 3288 bp
ATGGATACCAAAGGAAGACTTATTGCAGGTTCTCACAATAGGAATGAGTTTGTTCTCATCAATGCTGATGAGGTTTCAAGAGTAACATCTGTTAAAGAACTGAGTGGGCAGATTTGCCAGATCTGTGGAGATGAGATTGAGATTACAGTGGATGGGGAGCCATTTGTTGCTTGCAATGAATGTGCATTCCCCGTTTGTAGATCTTGCTACGAGTACGAAAGACGCGAGGGCAATCAAGCTTGCCCCCAATGCAAAACCCGATACAAGCGCATCAAAGGGAGTCCAAGAGTTGAAGGCGACGAAGAAGAGGATGACATTGATGATTTGGAGAATGAGTTTGATATTGCAAGCAATGAGAGGAGAGATCCTCACAGCATTGCTGAGGCAGTGCTGGCTGCTCGCCTTAACATTGGACGGGGTTCCCACGTCAATGGTTCAGGGATTAGCACACCAGCTGAATTCGACTCTGCCTCCGTTGCTTCCGAGATCCCTCTGCTGACGTATGGCCAAGAGGATGTTGGAATTGCCTCTGATAAGCATGCTCTTATTGTTCCTCCATTTATGAGTCGCGGAAAACGAGTTCATCCAATGCCATCTTCTGATTCCTCTATGTCCTTTCCACCGAGGCCCATGGATCCTAAGAAAGACTTAGCTGTGTATGGTTATGGAACTGTTGCATGGAAGGAGAGAATGGAGGACTGGAAGAAGAAGCAAAATGAAAAACTTCAGGTGGTGAAGCACCAAGGAGGAAATAATGGTGGAGATAATAACGGAGAGCCGGATGATCCTGATTTACCAAAGATGGATGAAGGCAGGCAGCCGCTTTCGAGGAAGTTGCCTATTTCTTCGAGCAAGATAAATCCTTATAGGATGGTAATCTTACTCCGTCTTACAGTTCTTGGCCTCTTTTTTCACTATAGAATTCTCCACCCGGTCAACAATGCCTATGGACTCTGGTTAACTTCTATAATATGTGAGATTTGGTTTGCCATGTCATGGATATTGGATCAGTTTCCTAAGTGGTATCCAATTGAGAGAGAAACATACCTTGATCGATTATCACTGAGGTATGAGAAAGAAGGGAAGCCATCTGAGTTGCCTGATCTAGATGTGTTTGTTAGTACTGTTGATCCTATGAAGGAGCCTCCACTTATCACAGCAAACACGGTTCTGTCCATCCTTGCCGTAGATTATCCGGTTGACAAAGTTGCATGTTACGTATCAGATGATGGTGCTGCAATGCTTACGTTTGAAGCCCTCTCAGAGACATCTGAGTTTGCACGAAAGTGGGTTCCATTCTGCAAGAAGTACAGCATTGAACCCCGTGCCCCAGAATGGTATTTTGCTCAAAAAGTTGACTATCTGAGAGACAAAGTTGATCCGACATTTGTTAGGGAACGTCGAGCCATTAAGAGGGAGTATGAAGAGTTCAAAGTTCGGATAAATTTGTTGGTCGCAACAGCGCAGAAAGTCCCTGAGGAAGGTTGGACAATGCAGGACGGGACTCCATGGCCTGGAAATAATGTCAGGGATCATCCTGGGATGATTCAGGTTTTCCTTGGTCAAAATGGTGTTCGTGATGTAGAAGGAAATGAATTACCACGTCTGGTTTATGTGTCTCGTGAAAAGAGACCGGGTTTTGATCATCACAAGAAAGCTGGAGCTATGAATTCTCTGGTGCGGGTATCAGCAATCATATCAAATGCTCCTTACATACTGAATGTTGACTGTGATCACTACATAAACAACAGCAAAGCTCTTCGTGAAGCAATGTGCTTCATGATGGACCCCCAGTCAGGAAAGAAGATCTGTTACGTACAGTTTCCTCAAAGATTTGATGGGATTGATCTTCACGATAGATACTCAAATCGCAACGTTGTATTCTTTGATATCAATATGAAAGGTTTAGATGGGATCCAAGGACCCATTTACGTTGGAACTGGGTGTGTCTTCCGAAGGCAGGCACTATATGGATTTGATGCTCCTACCAAGAAAAAACCACCAGGGAAGACCTGTAATTGTTGGCCAAAATGGTGCTGCATGTGTTGTGGATCTAGAAAGAAAAACAAGAAATCCAAGTCAAACGATAAAAAGAAGAAGACCAAGGATACCTCAAAGCAGATACACGCACTAGAAAATATTCAGGAGGGGATTGAAGGAATAGATAATGAAAAGGCATCCCTGATTCCCCAAATAAAATTTGAGAAAAAGTTTGGACAGTCCCCAGTTTTCATTGCTTCGACACTTATGGAAGACGGTGGAGTTCCAAAGGGAACAAGTTCTGCATCACTCTTGAAAGAAGCCATCCACGTCATTAGTTGTGGCTACGAAGATAAATCAGAATGGGGGAAAGAGGTTGGTTGGATCTATGGCTCTGTTACAGAGGATATCCTAACGGGATTCAAGATGCATTGTCATGGCTGGCGATCTGTGTATTGCATGCCCAAGAGGCCTGCATTCAAGGGTTCTGCTCCTATTAACTTGTCAGATCGGCTTCACCAGGTGCTTCGGTGGGCTTTGGGATCCGTTGAAATTTTGTTGAGCAGGCATTGCCCGATTTGGTATGGATATGGGTGTGGTTTGAAATGGTTGGAGCGCTTTTCTTATATAAACTCGGTTGTTTATCCTTTAACATCCATCCCCTTGCTTGCGTACTGTTCCTTGCCGGCCGTCTGTCTCCTTACTGGGAAATTTATTGTCCCTGAGATTAGCAACTATGCCAGCATCCTTTTTATGGCTCTCTTTTTGTCCATCGCTGCAACGAGCATACTTGAGATGCAGTGGGGACATGTTGGCATCCACGACTGGTGGAGGAATGAACAGTTCTGGGTGATTGGTGGTGCGTCATCACACTTCTTCGCACTCATCCAGGGTCTGCTCAAGGTTTTGGGTGGTGTGAACACAAACTTCACTGTCACATCAAAAGCAGCAGATGATGGAGAGTTTTCCGACCTATACCTCTTCAAGTGGACGTCACTTTTGATCCCGCCCATGACCTTATTGATCATAAACATAATTGGAGTCGTAGTTGGAATTTCAGATGCCATCAACAATGGTTACGAAACATGGGGTCCTCTCTTTGGTAGGCTGTTCTTTGCCATTTGGGTCATCGTCCATCTTTACCCGTTCCTAAAAGGTTTGGTGGGAAGACAAGAGAGACTGCCGACCATCATTGTGGTGTGGTCAATTCTTCTGGCATCCATATTCTCCCTGCTGTGGGTGCGAATCAATCCATTTGTGAATAAGGGTGGCATTGTACTAGAAGTTTGCGGGCTGGATTGTAACTGA

Protein Analysis

1096

Amino Acids

123.56

Weight (kDa)

7.24

Isoelectric Point (pI)

38.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-UDP PF14569 30 - 105 7.2e-42 Zinc-binding RING-finger
Cellulose_synt PF03552 369 - 1083 0.0 Cellulose synthase
Glyco_trans_2_3 PF13632 785 - 888 9.9e-07 Glycosyl transferase family group 2
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 2975
Acc36I ACCTGC 1 cut(s) 17
AccB7I CCANNNNNTGG 2 cut(s) 996, 1514
AccII CGCG 2 cut(s) 225, 570
AciI CCGC 5 cut(s) 570, 821, 1681, 2987, 3270
AclI AACGTT 1 cut(s) 1875
AcoI YGGCCR 3 cut(s) 505, 2024, 2667
AcsI RAATTY 8 cut(s) 458, 921, 1444, 1669, 2198, 2532, 2690, 3033
AcuI CTGAAG 1 cut(s) 710
AcyI GRCGYC 1 cut(s) 2972
AdeI CACNNNGTG 1 cut(s) 2503
AfaI GTAC 6 cut(s) 215, 1123, 1310, 1818, 2654, 3258
AfeI AGCGCT 1 cut(s) 2597
AflIII ACRYGT 1 cut(s) 2788
AhdI GACNNNNNGTC 1 cut(s) 1792
AjiI CACGTC 3 cut(s) 427, 1604, 2311
AjnI CCWGG 5 cut(s) 1513, 1537, 2002, 2499, 2868
AjuI GAANNNNNNNTTGG 2 cut(s) 580, 612
AleI CACNNNNGTG 1 cut(s) 1285
AloI GAACNNNNNNTCC 2 cut(s) 564, 596
AluBI AGCT 6 cut(s) 239, 455, 653, 1658, 1664, 1757
AluI AGCT 6 cut(s) 239, 455, 653, 1658, 1664, 1757
Alw26I GTCTC 6 cut(s) 1259, 1362, 1623, 1624, 2681, 3151
AlwNI CAGNNNCTG 1 cut(s) 2875
Aor51HI AGCGCT 1 cut(s) 2597
AoxI GGCC 7 cut(s) 505, 626, 901, 1511, 2024, 2450, 2667
ApeKI GCWGC 6 cut(s) 395, 817, 1235, 2037, 2756, 2927
ApoI RAATTY 8 cut(s) 458, 921, 1444, 1669, 2198, 2532, 2690, 3033
ArsI GACNNNNNNTTYG 2 cut(s) 2962, 2994
Asp700I GAANNNNTTC 3 cut(s) 723, 2139, 2278
AspLEI GCGC 3 cut(s) 270, 1465, 2598
AspS9I GGNCC 4 cut(s) 627, 1786, 1922, 3071
AsuC2I CCSGG 2 cut(s) 932, 1635
AsuHPI GGTGA 3 cut(s) 745, 2489, 2842
AvaII GGWCC 3 cut(s) 1786, 1922, 3071
AxyI CCTNAGG 1 cut(s) 1476
BaeGI GKGCMC 1 cut(s) 1330
BalI TGGCCA 2 cut(s) 507, 2026
BamHI GGATCC 3 cut(s) 634, 1914, 2522
BarI GAAGNNNNNNTAC 2 cut(s) 1796, 1828
BauI CACGAG 1 cut(s) 1620
BbsI GAAGAC 6 cut(s) 22, 1942, 2015, 2105, 2259, 3154
BbvCI CCTCAGC 1 cut(s) 381
BbvI GCAGC 6 cut(s) 382, 829, 1222, 2024, 2743, 2939
BceAI ACGGC 2 cut(s) 1169, 2654
BcgI CGANNNNNNTGC 2 cut(s) 817, 851
BciT130I CCWGG 5 cut(s) 1515, 1539, 2004, 2501, 2870
BciVI GTATCC 2 cut(s) 1035, 2101
BclI TGATCA 3 cut(s) 1642, 1732, 3003
BcnI CCSGG 2 cut(s) 932, 1635
BcoDI GTCTC 6 cut(s) 1259, 1362, 1623, 1624, 2681, 3151
BfaI CTAG 4 cut(s) 1106, 2055, 2132, 3260
BfmI CTRYAG 1 cut(s) 916
BfoI RGCGCY 1 cut(s) 2599
BfuAI ACCTGC 1 cut(s) 17
BfuI GTATCC 2 cut(s) 1035, 2101
BglI GCCNNNNNGGC 1 cut(s) 2449
BglII AGATCT 3 cut(s) 120, 200, 1806
BisI GCNGC 7 cut(s) 396, 818, 821, 1236, 2038, 2757, 2928
BlsI GCNGC 7 cut(s) 397, 819, 822, 1237, 2039, 2758, 2929
BmcAI AGTACT 1 cut(s) 1123
Bme1390I CCNGG 7 cut(s) 932, 1515, 1539, 1635, 2004, 2501, 2870
Bme18I GGWCC 3 cut(s) 1786, 1922, 3071
BmeRI GACNNNNNGTC 1 cut(s) 1792
BmgBI CACGTC 3 cut(s) 427, 1604, 2311
BmgT120I GGNCC 4 cut(s) 627, 1786, 1922, 3071
BmrFI CCNGG 7 cut(s) 932, 1515, 1539, 1635, 2004, 2501, 2870
BmrI ACTGGG 4 cut(s) 1786, 1950, 2219, 2694
BmuI ACTGGG 4 cut(s) 1786, 1950, 2219, 2694
BpiI GAAGAC 6 cut(s) 22, 1942, 2015, 2105, 2259, 3154
BplI GAGNNNNNCTC 2 cut(s) 352, 384
BpmI CTGGAG 1 cut(s) 1680
Bpu10I CCTNAGC 1 cut(s) 381
BpuEI CTTGAG 2 cut(s) 2792, 2864
BpuMI CCSGG 2 cut(s) 932, 1635
Bsa29I ATCGAT 1 cut(s) 1054
BsaAI YACGTR 2 cut(s) 1219, 1816
BsaBI GATNNNNATC 1 cut(s) 875
BsaHI GRCGYC 1 cut(s) 2972
BsaI GGTCTC 1 cut(s) 1624
BsaWI WCCGGW 1 cut(s) 1195
BsaXI ACNNNNNCTCC 6 cut(s) 320, 350, 455, 485, 3012, 3042
Bse118I RCCGGY 1 cut(s) 2665
Bse1I ACTGG 6 cut(s) 704, 1792, 1945, 2225, 2689, 2810
Bse21I CCTNAGG 1 cut(s) 1476
Bse3DI GCAATG 7 cut(s) 181, 358, 375, 1245, 1776, 2232, 2548
Bse8I GATNNNNATC 1 cut(s) 875
BseBI CCWGG 5 cut(s) 1515, 1539, 2004, 2501, 2870
BseCI ATCGAT 1 cut(s) 1054
BseJI GATNNNNATC 1 cut(s) 875
BseMI GCAATG 7 cut(s) 181, 358, 375, 1245, 1776, 2232, 2548
BseMII CTCAG 9 cut(s) 92, 372, 1055, 1083, 1263, 1275, 1355, 1467, 2694
BseNI ACTGG 6 cut(s) 704, 1792, 1945, 2225, 2689, 2810
BseRI GAGGAG 1 cut(s) 373
BseSI GKGCMC 1 cut(s) 1330
BseX3I CGGCCG 1 cut(s) 2667
BseXI GCAGC 6 cut(s) 382, 829, 1222, 2024, 2743, 2939
Bsh1236I CGCG 2 cut(s) 225, 570
Bsh1285I CGRYCG 1 cut(s) 2670
BshFI GGCC 7 cut(s) 507, 628, 903, 1513, 2026, 2452, 2669
BshVI ATCGAT 1 cut(s) 1054
BsiEI CGRYCG 1 cut(s) 2670
BsiSI CCGG 5 cut(s) 779, 932, 1196, 1634, 2666
BslFI GGGAC 5 cut(s) 1457, 1516, 2206, 2684, 2799
BsmAI GTCTC 6 cut(s) 1259, 1362, 1623, 1624, 2681, 3151
BsmFI GGGAC 5 cut(s) 1457, 1516, 2206, 2684, 2799
BsmI GAATGC 2 cut(s) 185, 2456
BsnI GGCC 7 cut(s) 507, 628, 903, 1513, 2026, 2452, 2669
Bso31I GGTCTC 1 cut(s) 1624
Bsp1286I GDGCHC 1 cut(s) 1330
Bsp19I CCATGG 2 cut(s) 630, 1508
BspACI CCGC 5 cut(s) 570, 821, 1681, 2987, 3270
BspANI GGCC 7 cut(s) 507, 628, 903, 1513, 2026, 2452, 2669
BspCNI CTCAG 9 cut(s) 93, 373, 1056, 1084, 1264, 1274, 1356, 1468, 2695
BspDI ATCGAT 1 cut(s) 1054
BspFNI CGCG 2 cut(s) 225, 570
BspHI TCATGA 1 cut(s) 1779
BspMI ACCTGC 1 cut(s) 17
BspQI GCTCTTC 1 cut(s) 1764
BspTNI GGTCTC 1 cut(s) 1624
BsrDI GCAATG 7 cut(s) 181, 358, 375, 1245, 1776, 2232, 2548
BsrFI RCCGGY 1 cut(s) 2665
BsrI ACTGG 6 cut(s) 704, 1792, 1945, 2225, 2689, 2810
BssAI RCCGGY 1 cut(s) 2665
BssNI GRCGYC 1 cut(s) 2972
BssSI CACGAG 1 cut(s) 1620
BssT1I CCWWGG 6 cut(s) 630, 742, 1508, 1558, 1918, 2103
Bst2BI CACGAG 1 cut(s) 1620
Bst2UI CCWGG 5 cut(s) 1515, 1539, 2004, 2501, 2870
Bst6I CTCTTC 4 cut(s) 300, 1419, 1764, 2966
BstACI GRCGYC 1 cut(s) 2972
BstAPI GCANNNNNTGC 1 cut(s) 2550
BstBAI YACGTR 2 cut(s) 1219, 1816
BstDSI CCRYGG 2 cut(s) 630, 1508
BstENI CCTNNNNNAGG 1 cut(s) 1479
BstFNI CGCG 2 cut(s) 225, 570
BstH2I RGCGCY 1 cut(s) 2599
BstHHI GCGC 3 cut(s) 270, 1465, 2598
BstMAI GTCTC 6 cut(s) 1259, 1362, 1623, 1624, 2681, 3151
BstMCI CGRYCG 1 cut(s) 2670
BstMWI GCNNNNNNNGC 6 cut(s) 249, 392, 476, 2449, 2550, 3220
BstNI CCWGG 5 cut(s) 1515, 1539, 2004, 2501, 2870
BstNSI RCATGY 5 cut(s) 542, 1215, 2044, 2443, 2792
BstSCI CCNGG 7 cut(s) 930, 1513, 1537, 1633, 2002, 2499, 2868
BstSFI CTRYAG 1 cut(s) 916
BstSLI GKGCMC 1 cut(s) 1330
BstSNI TACGTA 2 cut(s) 1219, 1816
BstUI CGCG 2 cut(s) 225, 570
BstV1I GCAGC 6 cut(s) 382, 829, 1222, 2024, 2743, 2939
BstV2I GAAGAC 6 cut(s) 22, 1942, 2015, 2105, 2259, 3154
BstXI CCANNNNNNTGG 3 cut(s) 125, 431, 3175
BstZI CGGCCG 1 cut(s) 2667
Bsu15I ATCGAT 1 cut(s) 1054
Bsu36I CCTNAGG 1 cut(s) 1476
BsuI GTATCC 2 cut(s) 1035, 2101
BsuRI GGCC 7 cut(s) 507, 628, 903, 1513, 2026, 2452, 2669
BsuTUI ATCGAT 1 cut(s) 1054
BtgI CCRYGG 2 cut(s) 630, 1508
BtgZI GCGATG 1 cut(s) 2737
BtrI CACGTC 3 cut(s) 427, 1604, 2311
BtsI GCAGTG 2 cut(s) 393, 2786
BtsIMutI CAGTG 5 cut(s) 153, 393, 1061, 2786, 2910
BveI ACCTGC 1 cut(s) 17
CaiI CAGNNNCTG 1 cut(s) 2875
CciI TCATGA 1 cut(s) 1779
CfoI GCGC 3 cut(s) 270, 1465, 2598
Cfr10I RCCGGY 1 cut(s) 2665
Cfr13I GGNCC 4 cut(s) 627, 1786, 1922, 3071
ClaI ATCGAT 1 cut(s) 1054
CseI GACGC 2 cut(s) 231, 2832
CsiI ACCWGGT 1 cut(s) 2499
Csp6I GTAC 6 cut(s) 214, 1122, 1309, 1817, 2653, 3257
CviQI GTAC 6 cut(s) 214, 1122, 1309, 1817, 2653, 3257
DraIII CACNNNGTG 1 cut(s) 2503
DriI GACNNNNNGTC 1 cut(s) 1792
EaeI YGGCCR 3 cut(s) 505, 2024, 2667
EagI CGGCCG 1 cut(s) 2667
Eam1104I CTCTTC 4 cut(s) 300, 1419, 1764, 2966
Eam1105I GACNNNNNGTC 1 cut(s) 1792
EarI CTCTTC 4 cut(s) 300, 1419, 1764, 2966
EclXI CGGCCG 1 cut(s) 2667
Eco105I TACGTA 2 cut(s) 1219, 1816
Eco130I CCWWGG 6 cut(s) 630, 742, 1508, 1558, 1918, 2103
Eco147I AGGCCT 1 cut(s) 2452
Eco31I GGTCTC 1 cut(s) 1624
Eco32I GATATC 2 cut(s) 1891, 2389
Eco47I GGWCC 3 cut(s) 1786, 1922, 3071
Eco47III AGCGCT 1 cut(s) 2597
Eco52I CGGCCG 1 cut(s) 2667
Eco57I CTGAAG 1 cut(s) 710
Eco81I CCTNAGG 1 cut(s) 1476
EcoNI CCTNNNNNAGG 1 cut(s) 1479
EcoO109I RGGNCCY 2 cut(s) 1922, 3071
EcoRI GAATTC 3 cut(s) 458, 921, 1669
EcoRII CCWGG 5 cut(s) 1513, 1537, 2002, 2499, 2868
EcoRV GATATC 2 cut(s) 1891, 2389
EcoT14I CCWWGG 6 cut(s) 630, 742, 1508, 1558, 1918, 2103
EcoT22I ATGCAT 1 cut(s) 2412
ErhI CCWWGG 6 cut(s) 630, 742, 1508, 1558, 1918, 2103
FalI AAGNNNNNCTT 3 cut(s) 35, 632, 664
FaqI GGGAC 5 cut(s) 1457, 1516, 2206, 2684, 2799
FauI CCCGC 3 cut(s) 1674, 2994, 3263
FbaI TGATCA 3 cut(s) 1642, 1732, 3003
Fnu4HI GCNGC 7 cut(s) 396, 818, 821, 1236, 2038, 2757, 2928
Fsp4HI GCNGC 7 cut(s) 396, 818, 821, 1236, 2038, 2757, 2928
FspBI CTAG 4 cut(s) 1106, 2055, 2132, 3260
GlaI GCGC 3 cut(s) 269, 1464, 2597
GluI GCNGC 7 cut(s) 396, 818, 821, 1236, 2038, 2757, 2928
GsuI CTGGAG 1 cut(s) 1680
HaeII RGCGCY 1 cut(s) 2599
HaeIII GGCC 7 cut(s) 507, 628, 903, 1513, 2026, 2452, 2669
HapII CCGG 5 cut(s) 779, 932, 1196, 1634, 2666
HgaI GACGC 2 cut(s) 231, 2832
HhaI GCGC 3 cut(s) 270, 1465, 2598
Hin1I GRCGYC 1 cut(s) 2972
Hin6I GCGC 3 cut(s) 268, 1463, 2596
HinP1I GCGC 3 cut(s) 268, 1463, 2596
HincII GTYRAC 5 cut(s) 937, 960, 1201, 1357, 1726
HindII GTYRAC 5 cut(s) 937, 960, 1201, 1357, 1726
HindIII AAGCTT 1 cut(s) 237
HpaI GTTAAC 1 cut(s) 960
HpaII CCGG 5 cut(s) 779, 932, 1196, 1634, 2666
HphI GGTGA 3 cut(s) 745, 2489, 2842
Hpy166II GTNNAC 7 cut(s) 937, 960, 1201, 1357, 1726, 2899, 2970
Hpy8I GTNNAC 7 cut(s) 937, 960, 1201, 1357, 1726, 2899, 2970
Hpy99I CGWCG 2 cut(s) 302, 1404
HpyAV CCTTC 9 cut(s) 287, 676, 803, 1073, 1132, 1475, 1580, 1950, 2150
HpyF10VI GCNNNNNNNGC 6 cut(s) 249, 392, 476, 2449, 2550, 3220
Hsp92I GRCGYC 1 cut(s) 2972
HspAI GCGC 3 cut(s) 268, 1463, 2596
KroI GCCGGC 1 cut(s) 2665
KroNI GCCGGC 1 cut(s) 2667
Ksp22I TGATCA 3 cut(s) 1642, 1732, 3003
KspAI GTTAAC 1 cut(s) 960
LguI GCTCTTC 1 cut(s) 1764
LmnI GCTCC 7 cut(s) 157, 1141, 1661, 1711, 1987, 2476, 2593
Lsp1109I GCAGC 6 cut(s) 382, 829, 1222, 2024, 2743, 2939
MabI ACCWGGT 1 cut(s) 2499
MaeI CTAG 4 cut(s) 1106, 2055, 2132, 3260
MaeIII GTNAC 8 cut(s) 82, 1214, 1811, 2377, 2914, 2973, 3056, 3281
MfeI CAATTG 1 cut(s) 1029
MhlI GDGCHC 1 cut(s) 1330
MlsI TGGCCA 2 cut(s) 507, 2026
MluNI TGGCCA 2 cut(s) 507, 2026
MlyI GAGTC 6 cut(s) 289, 458, 574, 945, 1498, 3030
MmeI TCCRAC 8 cut(s) 499, 1406, 1466, 1915, 2342, 2571, 2973, 3010
Mox20I TGGCCA 2 cut(s) 507, 2026
Mph1103I ATGCAT 1 cut(s) 2412
MroNI GCCGGC 1 cut(s) 2665
MroXI GAANNNNTTC 3 cut(s) 723, 2139, 2278
MscI TGGCCA 2 cut(s) 507, 2026
MseI TTAA 6 cut(s) 93, 405, 959, 1410, 2478, 2630
MslI CAYNNNNRTG 5 cut(s) 429, 1285, 2415, 3173, 3176
Msp20I TGGCCA 2 cut(s) 507, 2026
MspA1I CMGCKG 1 cut(s) 455
MspI CCGG 5 cut(s) 779, 932, 1196, 1634, 2666
MspR9I CCNGG 7 cut(s) 932, 1515, 1539, 1635, 2004, 2501, 2870
MunI CAATTG 1 cut(s) 1029
Mva1269I GAATGC 2 cut(s) 185, 2456
MvaI CCWGG 5 cut(s) 1515, 1539, 2004, 2501, 2870
MvnI CGCG 2 cut(s) 225, 570
MwoI GCNNNNNNNGC 6 cut(s) 249, 392, 476, 2449, 2550, 3220
NaeI GCCGGC 1 cut(s) 2667
NciI CCSGG 2 cut(s) 932, 1635
NcoI CCATGG 2 cut(s) 630, 1508
NgoMIV GCCGGC 1 cut(s) 2665
NmuCI GTSAC 2 cut(s) 2914, 2973
NsiI ATGCAT 1 cut(s) 2412
NspI RCATGY 5 cut(s) 542, 1215, 2044, 2443, 2792
OliI CACNNNNGTG 1 cut(s) 1285
PaeI GCATGC 2 cut(s) 542, 2443
PagI TCATGA 1 cut(s) 1779
PceI AGGCCT 1 cut(s) 2452
PciI ACATGT 1 cut(s) 2788
PciSI GCTCTTC 1 cut(s) 1764
PcsI WCGNNNNNNNCGW 2 cut(s) 222, 574
PctI GAATGC 2 cut(s) 185, 2456
PdiI GCCGGC 1 cut(s) 2667
PdmI GAANNNNTTC 3 cut(s) 723, 2139, 2278
PfeI GAWTC 5 cut(s) 602, 1546, 2185, 2400, 3225
PflMI CCANNNNNTGG 2 cut(s) 996, 1514
PkrI GCNGC 7 cut(s) 397, 819, 822, 1237, 2039, 2758, 2929
PleI GAGTC 6 cut(s) 288, 458, 573, 945, 1498, 3029
PpsI GAGTC 6 cut(s) 288, 458, 573, 945, 1498, 3029
Ppu21I YACGTR 2 cut(s) 1219, 1816
PpuMI RGGWCCY 2 cut(s) 1922, 3071
PscI ACATGT 1 cut(s) 2788
Psp1406I AACGTT 1 cut(s) 1875
Psp5II RGGWCCY 2 cut(s) 1922, 3071
Psp6I CCWGG 5 cut(s) 1513, 1537, 2002, 2499, 2868
PspGI CCWGG 5 cut(s) 1513, 1537, 2002, 2499, 2868
PspPI GGNCC 4 cut(s) 627, 1786, 1922, 3071
PspPPI RGGWCCY 2 cut(s) 1922, 3071
PsrI GAACNNNNNNTAC 2 cut(s) 1412, 1444
PstNI CAGNNNCTG 1 cut(s) 2875
PvuII CAGCTG 1 cut(s) 455
RsaI GTAC 6 cut(s) 215, 1123, 1310, 1818, 2654, 3258
RsaNI GTAC 6 cut(s) 214, 1122, 1309, 1817, 2653, 3257
RseI CAYNNNNRTG 5 cut(s) 429, 1285, 2415, 3173, 3176
SapI GCTCTTC 1 cut(s) 1764
SaqAI TTAA 6 cut(s) 93, 405, 959, 1410, 2478, 2630
SatI GCNGC 7 cut(s) 396, 818, 821, 1236, 2038, 2757, 2928
Sau96I GGNCC 4 cut(s) 627, 1786, 1922, 3071
ScaI AGTACT 1 cut(s) 1123
SchI GAGTC 6 cut(s) 289, 458, 574, 945, 1498, 3030
ScrFI CCNGG 7 cut(s) 932, 1515, 1539, 1635, 2004, 2501, 2870
SduI GDGCHC 1 cut(s) 1330
SexAI ACCWGGT 1 cut(s) 2499
SfcI CTRYAG 1 cut(s) 916
SinI GGWCC 3 cut(s) 1786, 1922, 3071
SmiMI CAYNNNNRTG 5 cut(s) 429, 1285, 2415, 3173, 3176
SmlI CTYRAG 2 cut(s) 2771, 2879
SmoI CTYRAG 2 cut(s) 2771, 2879
SnaBI TACGTA 2 cut(s) 1219, 1816
SphI GCATGC 2 cut(s) 542, 2443
SseBI AGGCCT 1 cut(s) 2452
SsiI CCGC 5 cut(s) 570, 821, 1681, 2987, 3270
SspI AATATT 1 cut(s) 2140
SspMI CTAG 4 cut(s) 1106, 2055, 2132, 3260
StuI AGGCCT 1 cut(s) 2452
StyD4I CCNGG 7 cut(s) 930, 1513, 1537, 1633, 2002, 2499, 2868
StyI CCWWGG 6 cut(s) 630, 742, 1508, 1558, 1918, 2103
TaqI TCGA 6 cut(s) 462, 827, 848, 1054, 1402, 2240
TatI WGTACW 3 cut(s) 1121, 1308, 3256
TauI GCSGC 1 cut(s) 823
TfiI GAWTC 5 cut(s) 602, 1546, 2185, 2400, 3225
Tru1I TTAA 6 cut(s) 93, 405, 959, 1410, 2478, 2630
Tru9I TTAA 6 cut(s) 93, 405, 959, 1410, 2478, 2630
TscAI CASTG 5 cut(s) 153, 393, 1068, 2786, 2917
TseFI GTSAC 2 cut(s) 2914, 2973
TseI GCWGC 6 cut(s) 395, 817, 1235, 2037, 2756, 2927
Tsp45I GTSAC 2 cut(s) 2914, 2973
TspGWI ACGGA 4 cut(s) 463, 786, 875, 2515
TspRI CASTG 5 cut(s) 153, 393, 1068, 2786, 2917
Van91I CCANNNNNTGG 2 cut(s) 996, 1514
VpaK11BI GGWCC 3 cut(s) 1786, 1922, 3071
XagI CCTNNNNNAGG 1 cut(s) 1479
XapI RAATTY 8 cut(s) 458, 921, 1444, 1669, 2198, 2532, 2690, 3033
XbaI TCTAGA 2 cut(s) 1105, 2054
XceI RCATGY 5 cut(s) 542, 1215, 2044, 2443, 2792
XcmI CCANNNNNNNNNTGG 1 cut(s) 515
XmnI GAANNNNTTC 3 cut(s) 723, 2139, 2278
XspI CTAG 4 cut(s) 1106, 2055, 2132, 3260
ZraI GACGTC 1 cut(s) 2973
ZrmI AGTACT 1 cut(s) 1123
Zsp2I ATGCAT 1 cut(s) 2412
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.