Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6D

Orthogroup ID

OG0000892

Physical Location & Seq

Genomic Coordinates Reverse (-)

35147295 .. 35154281

Gene Structure 6987 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6DG196400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2808 bp

ATGGCTTCAGAGATCCCTCTCCTGACCTATGGACAAGAGGATGTTGGGATTGCATCTGATAAACATGCCCTCATTATTCCCCCATTTATGAGTCGTGGAAAACGTGTTCATCCGATGCCGTCTGCTGATGCCTCCATGTCATTTCCACCCAGGCCAATGGATCCTAAGAAAGACTTAGCTGTATATGGGTATGGAACTGTTGCATGGAAGGAGCGAATGGAGGAATGGAAGAAGAAGCAAAATGAAAAGCTTCAGGTGGTGAAGCACGAAGGAGGAAATGGTGGTGGAAACAATGAGCCAATCGATTCTGATTTACCCAAGATGGATGAAGGCAGACAGCCACTGTCGAGGAAGTTGCCTATACCTTCAAGCAAGATAAATCCATACAGAATGATCATCCTACTCCGTCTTGCGGTTCTTGGCCTATTTTTTCACTATAGAATTCTTCATCCAGTCAACGATGCATATGGATTGTGGTTAACATCTGTAATATGTGAGATTTGGTTTGCCATGTCATGGATATTGGATCAGTTTCCCAAATGGCATCCGATTGAGAGAGAAACATACCTTGATCGATTGTCACTGAGGTATGAGAAGGAAGGGAAGACATCTGGGTTAGCTGACATAGACATCTTTGTTAGTACGGTTGATCCTACAAAGGAGCCTCCACTTATCACAGCAAACACGGTTCTGTCCATCCTTGCTGTAGACTATCCAGTCGACAAAGTTGCATGCTATGTCTCAGATGATGGTGCTGCCATGCTCACTTTTGAAGCTCTTTCAGAGACATCTGAATTTGCAAGAAAGTGGGTCCCTTTCTGCAAGAAGTTCAACATTGAACCCCGGGCCCCAGAGTGGTATTTTGCGCAAAAAGTTGACTATTTGAGAGATAAAGTAGATCCAACATTTGTCAGGGAACGTCGAGCCATGAAGAGGGATTATGAAGAGTTCAAAGTTCGGATAAATTCATTGGTTGCCACAGCACAGAAGGTTCCCGAGGAGGGTTGGACAATGCAGGATGGGTCTCCATGGCCTGGCAACAATGTACGGGATCATCCTGGAATGATTCAGGTTTTCCTTGGGCAAAATGGTTTTCGTGATATTGAAGGCAATGAGTTACCCCGTTTGGTTTATGTGTCTCGTGAGAAGAGACCGGGTTTTGATCATCACAAAAAGGCTGGCGCTATGAATGCTCTGATACGGGTGTCAGCAGTAGTCTCAAATGCTCCTTACATACTCAATGTTGACTGTGATCACTATATAAACAACAGCAAAGCACTTCGAGAAGCAATGTGCTTCATGATGGACCCCACATCAGGAAAGAAAATCTGTTATGTACAGTTTCCTCAAAGATTTGATGGGATTGATCTTCATGACAGATACTCAAATCGCAATGTTGTTTTCTTTGATATCAATATGAAAGGTTTAGATGGGATCCAAGGGCCCATTTATGTTGGAACTGGTTGTGTCTTCCGAAGGCAGGCCCTTTATGGATATGATGCTCCTGTGAAGAAGAAAGCCCCAGGGAAGACTTGTAATTGTTGGCCAAAATGGTGCTGCATGTGTTGTGGATCCAGAAAGACCAAGAAAAAAGCAAAGTCTAATGATAAAAAGAAAAAGAACAAGGAGGCTTCAAAGCAGATACATGCACTAGAGAATATTCAGGAGGGTGTTGAAGGAATAGATAATGAAAAATCATCCCTGATGCCCCAAATAAAATTTGAGAAAAAATTTGGACAGTCGCCAGTTTTCATAGCTTCTTCACTTATGGAAGACGGTGGAGTTCCCAAGGGAACAAGTTCTGCATCACTCTTAAAAGAAGCCATACATGTCATTAGTTGTGGCTATGAAGATAAAACGGAATGGGGAAAGGAGGTTGGGTGGATATATGGATCTGTTACAGAAGATATCCTAACAGGTTTCAAAATGCATTGCCATGGCTGGAGGTCAGTGTATTGCATGCCCAAAAGGCCTGCATTTAAGGGTTCAGCTCCTATAAATTTGTCAGATCGGCTACACCAGGTGCTTAGATGGGCCTTGGGATCTGTTGAGATTTTATTAAGCAGGCACTGTCCCATATGGTATGGATATGGGTGTGGTTTGAAATGGTTGGAGCGCTTTTCATATATCAACTCAGTTGTATATCCTTTGACATCCATACCCTTGATCGCTTACTGTTCCTTGCCAGCTGTCTGTCTCCTTACTGGGAAATTCATTGTCCCTGAGATTAGCAACTATGCAAGTATTATTTTCATGGCCCTCTTTCTATCCATCGCGGCAACTAGTGTACTTGAGATGCAGTGGGGGCATGTCGGCATTCATGACTGGTGGAGAAATGAACAGTTTTGGGTGATTGGTGGTGCATCATCACACCTGTTTGCGCTAGTCCAGGGTCTGCTCAAGGTCTTGGGTGGAGTTAGCACAAACTTCACTGTCACATCCAAAGCAGCAGATGATGGAGAGTATTCCGAGCTATATCTCTTCAAGTGGACGGCGCTATTAATCCCTCCTATGACCTTATTGATCATAAACATAATTGGAGTCGTAGTCGGAATTTCTGATGCCATTAACAATGGTTACGAAACATGGGGTCCTCTATTTGGTAGGTTATTCTTTGCCATATGGGTCATTGTCCATCTTTACCCATTCCTGAAAGGTATGGTGGGAAGAAATGACAGACTTCCCACAATCATTATTGTGTGGTCAATTCTTCTGGCATCCATATTCTCGCTATTATGGGTCCGAATAAACCCATTTGTGTCCAAAGGTGGTATTGTGTTAGAAGTTTGTGGGTTGGATTGTGACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0000271 GO:0000278 GO:0000281 GO:0000910 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005886 GO:0005887 GO:0005975 GO:0005976 GO:0006073 GO:0006996 GO:0007010 GO:0007017 GO:0007049 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009825 GO:0009832 GO:0009833 GO:0009987 GO:0010330 GO:0012505 GO:0016020 GO:0016021 GO:0016043 GO:0016049 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0016759 GO:0022402 GO:0030243 GO:0030244 GO:0030865 GO:0031122 GO:0031224 GO:0031226 GO:0032991 GO:0033692 GO:0034637 GO:0034645 GO:0040007 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043622 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0046527 GO:0051273 GO:0051274 GO:0051301 GO:0061640 GO:0071554 GO:0071669 GO:0071704 GO:0071840 GO:0071944 GO:0097435 GO:1901576 GO:1902494 GO:1903047 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulose_synt zf-UDP

Protein Analysis

935

Amino Acids

105.62

Weight (kDa)

8.69

Isoelectric Point (pI)

36.78

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cellulose_synt	PF03552	209 - 923	0.0	Cellulose synthase
Glyco_trans_2_3	PF13632	625 - 728	8.8e-07	Glycosyl transferase family group 2

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000892)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G21770 AT4G39350 AT5G09870 AT5G64740
fragaria_vesca	FvH4_1g23890 FvH4_1g23890 FvH4_1g23890 FvH4_1g23890 FvH4_1g23890 FvH4_2g13380 FvH4_2g13380 FvH4_2g13380 FvH4_2g13380 FvH4_2g13380 FvH4_5g26830 FvH4_5g26830 FvH4_5g26830
malus_domestica	MD00G1146900.v1.1 MD05G1029400.v1.1 MD10G1029800.v1.1 MD15G1340200.v1.1
prunus_persica	Prupe.5G000300_v2.0.a1 Prupe.5G000300_v2.0.a1 Prupe.5G000300_v2.0.a1 Prupe.6G161300_v2.0.a1 Prupe.6G161300_v2.0.a1 Prupe.8G035100_v2.0.a1
pyrus_communis	pycom01g03410 pycom01g03420 pycom01g03470 pycom05g02060 pycom05g02070 pycom15g29990
rosa_chinensis	RchiOBHm_Chr2g0119881 RchiOBHm_Chr6g0274931 RchiOBHm_Chr7g0217741
rosa_laevigata	RLG00000002442 RLG00000013507 RLG00000018496
rosa_multiflora	Rmu_sc0000202.1_g000022 Rmu_sc0001501.1_g000028 Rmu_sc0007760.1_g000002
rosa_roxburghii	Rroxscaffold_2G00124010 Rroxscaffold_3G00241720 Rroxscaffold_7G00193790
rosa_rugosa	Rorug02G0224300 Rorug02G0224400 Rorug02G0224500 Rorug06G0086400 Rorug06G0086500 Rorug07G0170900.1
rosa_samantha	Rh2AG282100 Rh2BG293400 Rh2DG288300 Rh2DG307400 Rh6AG201300 Rh6BG204900 Rh6CG206300 Rh6DG196400 Rh7AG311600 Rh7BG303500 Rh7CG330400
rosa_wichuraiana	Rw2G022520 Rw6G017510 Rw7G026440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	716
Acc16I	TGCGCA	1 cut(s)	867
AccB7I	CCANNNNNTGG	2 cut(s)	516, 1034
AccI	GTMKAC	2 cut(s)	708, 720
AccII	CGCG	1 cut(s)	2276
AciI	CCGC	2 cut(s)	413, 2276
AcoI	YGGCCR	1 cut(s)	1544
AcsI	RAATTY	8 cut(s)	441, 794, 964, 1718, 1730, 1999, 2210, 2553
AcuI	CTGAAG	1 cut(s)	236
AdeI	CACNNNGTG	1 cut(s)	2023
AfaI	GTAC	4 cut(s)	643, 1047, 1338, 2289
AfeI	AGCGCT	1 cut(s)	2117
AfiI	CCNNNNNNNGG	9 cut(s)	412, 516, 855, 933, 1001, 1034, 1316, 1480, 2600
AflIII	ACRYGT	2 cut(s)	103, 1828
AhlI	ACTAGT	1 cut(s)	2282
AjnI	CCWGG	6 cut(s)	149, 1033, 1057, 1522, 2019, 2388
AloI	GAACNNNNNNTCC	2 cut(s)	90, 122
AluBI	AGCT	8 cut(s)	179, 250, 620, 776, 1757, 1991, 2189, 2473
AluI	AGCT	8 cut(s)	179, 250, 620, 776, 1757, 1991, 2189, 2473
Alw26I	GTCTC	7 cut(s)	745, 779, 1029, 1143, 1144, 1222, 2201
AlwNI	CAGNNNCTG	3 cut(s)	343, 2070, 2395
Ama87I	CYCGRG	2 cut(s)	843, 995
Aor51HI	AGCGCT	1 cut(s)	2117
ApaI	GGGCCC	2 cut(s)	850, 1446
ApeKI	GCWGC	3 cut(s)	755, 1557, 2447
ApoI	RAATTY	8 cut(s)	441, 794, 964, 1718, 1730, 1999, 2210, 2553
AseI	ATTAAT	1 cut(s)	2501
Asp700I	GAANNNNTTC	2 cut(s)	249, 1798
AspLEI	GCGC	5 cut(s)	868, 1184, 2118, 2383, 2497
AsuC2I	CCSGG	3 cut(s)	844, 845, 1155
AsuHPI	GGTGA	2 cut(s)	271, 2362
AvaI	CYCGRG	2 cut(s)	843, 995
AvaII	GGWCC	4 cut(s)	811, 1306, 2591, 2740
BaeGI	GKGCMC	2 cut(s)	850, 1446
BaeI	ACNNNNGTAYC	2 cut(s)	1190, 1223
BalI	TGGCCA	1 cut(s)	1546
BamHI	GGATCC	3 cut(s)	160, 1434, 1571
BanII	GRGCYC	2 cut(s)	850, 1446
BauI	CACGAG	1 cut(s)	1140
BbsI	GAAGAC	4 cut(s)	611, 1462, 1535, 1779
BbvI	GCAGC	3 cut(s)	742, 1544, 2459
BceAI	ACGGC	2 cut(s)	103, 2508
BcgI	CGANNNNNNTGC	4 cut(s)	337, 371, 710, 744
BciT130I	CCWGG	6 cut(s)	151, 1035, 1059, 1524, 2021, 2390
BclI	TGATCA	4 cut(s)	393, 1162, 1252, 2523
BcnI	CCSGG	3 cut(s)	844, 845, 1155
BcoDI	GTCTC	7 cut(s)	745, 779, 1029, 1143, 1144, 1222, 2201
BcuI	ACTAGT	1 cut(s)	2282
BfaI	CTAG	4 cut(s)	1652, 2283, 2384, 2806
BfmI	CTRYAG	2 cut(s)	436, 705
BfoI	RGCGCY	3 cut(s)	1185, 2119, 2498
BglI	GCCNNNNNGGC	1 cut(s)	1969
BisI	GCNGC	4 cut(s)	756, 1558, 2277, 2448
BlsI	GCNGC	4 cut(s)	757, 1559, 2278, 2449
Bme1390I	CCNGG	9 cut(s)	151, 844, 845, 1035, 1059, 1155, 1524, 2021, 2390
Bme18I	GGWCC	4 cut(s)	811, 1306, 2591, 2740
BmeT110I	CYCGRG	2 cut(s)	843, 995
BmrFI	CCNGG	9 cut(s)	151, 844, 845, 1035, 1059, 1155, 1524, 2021, 2390
BmrI	ACTGGG	1 cut(s)	2214
BmuI	ACTGGG	1 cut(s)	2214
BpiI	GAAGAC	4 cut(s)	611, 1462, 1535, 1779
BpmI	CTGGAG	1 cut(s)	1963
BpuEI	CTTGAG	2 cut(s)	2312, 2384
BpuMI	CCSGG	3 cut(s)	844, 845, 1155
Bsa29I	ATCGAT	2 cut(s)	303, 574
BsaI	GGTCTC	2 cut(s)	1029, 1144
BsaXI	ACNNNNNCTCC	4 cut(s)	1865, 1895, 2532, 2562
Bsc4I	CCNNNNNNNGG	9 cut(s)	412, 516, 855, 933, 1001, 1034, 1316, 1480, 2600
Bse1I	ACTGG	6 cut(s)	452, 716, 1465, 1745, 2209, 2330
Bse3DI	GCAATG	4 cut(s)	1117, 1296, 1399, 1930
BseBI	CCWGG	6 cut(s)	151, 1035, 1059, 1524, 2021, 2390
BseCI	ATCGAT	2 cut(s)	303, 574
BseLI	CCNNNNNNNGG	9 cut(s)	412, 516, 855, 933, 1001, 1034, 1316, 1480, 2600
BseMI	GCAATG	4 cut(s)	1117, 1296, 1399, 1930
BseMII	CTCAG	4 cut(s)	575, 756, 2148, 2214
BseNI	ACTGG	6 cut(s)	452, 716, 1465, 1745, 2209, 2330
BseRI	GAGGAG	1 cut(s)	1013
BseSI	GKGCMC	2 cut(s)	850, 1446
BseXI	GCAGC	3 cut(s)	742, 1544, 2459
Bsh1236I	CGCG	1 cut(s)	2276
BshVI	ATCGAT	2 cut(s)	303, 574
BsiHKCI	CYCGRG	2 cut(s)	843, 995
BsiSI	CCGG	2 cut(s)	844, 1154
BslFI	GGGAC	3 cut(s)	797, 2058, 2204
BslI	CCNNNNNNNGG	9 cut(s)	412, 516, 855, 933, 1001, 1034, 1316, 1480, 2600
BsmAI	GTCTC	7 cut(s)	745, 779, 1029, 1143, 1144, 1222, 2201
BsmFI	GGGAC	3 cut(s)	797, 2058, 2204
BsmI	GAATGC	2 cut(s)	1195, 2316
Bso31I	GGTCTC	2 cut(s)	1029, 1144
BsoBI	CYCGRG	2 cut(s)	843, 995
Bsp120I	GGGCCC	2 cut(s)	846, 1442
Bsp1286I	GDGCHC	2 cut(s)	850, 1446
Bsp1407I	TGTACA	1 cut(s)	1336
Bsp19I	CCATGG	2 cut(s)	1028, 1936
BspACI	CCGC	2 cut(s)	413, 2276
BspCNI	CTCAG	4 cut(s)	576, 755, 2147, 2215
BspDI	ATCGAT	2 cut(s)	303, 574
BspFNI	CGCG	1 cut(s)	2276
BspHI	TCATGA	3 cut(s)	1299, 1372, 2320
BspTNI	GGTCTC	2 cut(s)	1029, 1144
BsrDI	GCAATG	4 cut(s)	1117, 1296, 1399, 1930
BsrGI	TGTACA	1 cut(s)	1336
BsrI	ACTGG	6 cut(s)	452, 716, 1465, 1745, 2209, 2330
BssSI	CACGAG	1 cut(s)	1140
BssT1I	CCWWGG	6 cut(s)	1028, 1078, 1438, 1788, 1936, 2037
Bst2BI	CACGAG	1 cut(s)	1140
Bst2UI	CCWGG	6 cut(s)	151, 1035, 1059, 1524, 2021, 2390
Bst6I	CTCTTC	4 cut(s)	926, 939, 1142, 2486
BstAUI	TGTACA	1 cut(s)	1336
BstC8I	GCNNGC	7 cut(s)	733, 1180, 1482, 1961, 1974, 2066, 2187
BstDEI	CTNAG	7 cut(s)	165, 175, 584, 742, 2027, 2134, 2223
BstDSI	CCRYGG	2 cut(s)	1028, 1936
BstFNI	CGCG	1 cut(s)	2276
BstH2I	RGCGCY	3 cut(s)	1185, 2119, 2498
BstHHI	GCGC	5 cut(s)	868, 1184, 2118, 2383, 2497
BstMAI	GTCTC	7 cut(s)	745, 779, 1029, 1143, 1144, 1222, 2201
BstMWI	GCNNNNNNNGC	3 cut(s)	1190, 1969, 2305
BstNI	CCWGG	6 cut(s)	151, 1035, 1059, 1524, 2021, 2390
BstNSI	RCATGY	7 cut(s)	68, 735, 1564, 1649, 1832, 1963, 2312
BstSCI	CCNGG	9 cut(s)	149, 842, 843, 1033, 1057, 1153, 1522, 2019, 2388
BstSFI	CTRYAG	2 cut(s)	436, 705
BstSLI	GKGCMC	2 cut(s)	850, 1446
BstUI	CGCG	1 cut(s)	2276
BstV1I	GCAGC	3 cut(s)	742, 1544, 2459
BstV2I	GAAGAC	4 cut(s)	611, 1462, 1535, 1779
BstX2I	RGATCY	7 cut(s)	12, 160, 898, 1434, 1571, 1892, 2042
BstXI	CCANNNNNNTGG	1 cut(s)	157
BstYI	RGATCY	7 cut(s)	12, 160, 898, 1434, 1571, 1892, 2042
Bsu15I	ATCGAT	2 cut(s)	303, 574
BsuTUI	ATCGAT	2 cut(s)	303, 574
BtgI	CCRYGG	2 cut(s)	1028, 1936
BtgZI	GCGATG	1 cut(s)	2257
BtsI	GCAGTG	1 cut(s)	2306
BtsIMutI	CAGTG	6 cut(s)	341, 581, 1956, 2068, 2306, 2430
Cac8I	GCNNGC	7 cut(s)	733, 1180, 1482, 1961, 1974, 2066, 2187
CaiI	CAGNNNCTG	3 cut(s)	343, 2070, 2395
CciI	TCATGA	3 cut(s)	1299, 1372, 2320
CfoI	GCGC	5 cut(s)	868, 1184, 2118, 2383, 2497
Cfr9I	CCCGGG	1 cut(s)	843
ClaI	ATCGAT	2 cut(s)	303, 574
CsiI	ACCWGGT	1 cut(s)	2019
Csp6I	GTAC	4 cut(s)	642, 1046, 1337, 2288
CviQI	GTAC	4 cut(s)	642, 1046, 1337, 2288
DdeI	CTNAG	7 cut(s)	165, 175, 584, 742, 2027, 2134, 2223
DraIII	CACNNNGTG	1 cut(s)	2023
DrdI	GACNNNNNNGTC	1 cut(s)	716
DseDI	GACNNNNNNGTC	1 cut(s)	716
EaeI	YGGCCR	1 cut(s)	1544
Eam1104I	CTCTTC	4 cut(s)	926, 939, 1142, 2486
EarI	CTCTTC	4 cut(s)	926, 939, 1142, 2486
Eco130I	CCWWGG	6 cut(s)	1028, 1078, 1438, 1788, 1936, 2037
Eco147I	AGGCCT	1 cut(s)	1972
Eco24I	GRGCYC	2 cut(s)	850, 1446
Eco31I	GGTCTC	2 cut(s)	1029, 1144
Eco32I	GATATC	2 cut(s)	1411, 1909
Eco47I	GGWCC	4 cut(s)	811, 1306, 2591, 2740
Eco47III	AGCGCT	1 cut(s)	2117
Eco57I	CTGAAG	1 cut(s)	236
Eco88I	CYCGRG	2 cut(s)	843, 995
EcoO109I	RGGNCCY	5 cut(s)	811, 847, 1442, 1483, 2591
EcoRI	GAATTC	1 cut(s)	441
EcoRII	CCWGG	6 cut(s)	149, 1033, 1057, 1522, 2019, 2388
EcoRV	GATATC	2 cut(s)	1411, 1909
EcoT14I	CCWWGG	6 cut(s)	1028, 1078, 1438, 1788, 1936, 2037
EcoT22I	ATGCAT	2 cut(s)	466, 1932
EcoT38I	GRGCYC	2 cut(s)	850, 1446
ErhI	CCWWGG	6 cut(s)	1028, 1078, 1438, 1788, 1936, 2037
FalI	AAGNNNNNCTT	2 cut(s)	158, 190
FaqI	GGGAC	3 cut(s)	797, 2058, 2204
FauNDI	CATATG	3 cut(s)	466, 2078, 2621
FbaI	TGATCA	4 cut(s)	393, 1162, 1252, 2523
FblI	GTMKAC	2 cut(s)	708, 720
Fnu4HI	GCNGC	4 cut(s)	756, 1558, 2277, 2448
FriOI	GRGCYC	2 cut(s)	850, 1446
Fsp4HI	GCNGC	4 cut(s)	756, 1558, 2277, 2448
FspBI	CTAG	4 cut(s)	1652, 2283, 2384, 2806
FspI	TGCGCA	1 cut(s)	867
GlaI	GCGC	5 cut(s)	867, 1183, 2117, 2382, 2496
GluI	GCNGC	4 cut(s)	756, 1558, 2277, 2448
GsuI	CTGGAG	1 cut(s)	1963
HaeII	RGCGCY	3 cut(s)	1185, 2119, 2498
HapII	CCGG	2 cut(s)	844, 1154
HhaI	GCGC	5 cut(s)	868, 1184, 2118, 2383, 2497
Hin6I	GCGC	5 cut(s)	866, 1182, 2116, 2381, 2495
HinP1I	GCGC	5 cut(s)	866, 1182, 2116, 2381, 2495
HincII	GTYRAC	5 cut(s)	457, 480, 721, 877, 1246
HindII	GTYRAC	5 cut(s)	457, 480, 721, 877, 1246
HindIII	AAGCTT	1 cut(s)	248
HinfI	GANTC	4 cut(s)	91, 305, 1066, 2541
HpaI	GTTAAC	1 cut(s)	480
HpaII	CCGG	2 cut(s)	844, 1154
HphI	GGTGA	2 cut(s)	271, 2362
Hpy166II	GTNNAC	8 cut(s)	457, 480, 709, 721, 877, 1246, 2288, 2490
Hpy8I	GTNNAC	8 cut(s)	457, 480, 709, 721, 877, 1246, 2288, 2490
Hpy99I	CGWCG	1 cut(s)	924
HpyCH4IV	ACGT	2 cut(s)	103, 919
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1190, 1969, 2305
HpyF3I	CTNAG	7 cut(s)	165, 175, 584, 742, 2027, 2134, 2223
HpySE526I	ACGT	2 cut(s)	103, 919
HspAI	GCGC	5 cut(s)	866, 1182, 2116, 2381, 2495
KflI	GGGWCCC	1 cut(s)	811
Ksp22I	TGATCA	4 cut(s)	393, 1162, 1252, 2523
KspAI	GTTAAC	1 cut(s)	480
LmnI	GCTCC	6 cut(s)	211, 661, 1231, 1507, 1996, 2113
Lsp1109I	GCAGC	3 cut(s)	742, 1544, 2459
MabI	ACCWGGT	1 cut(s)	2019
MaeI	CTAG	4 cut(s)	1652, 2283, 2384, 2806
MaeII	ACGT	2 cut(s)	103, 919
MaeIII	GTNAC	6 cut(s)	579, 1116, 1897, 2434, 2576, 2801
MflI	RGATCY	7 cut(s)	12, 160, 898, 1434, 1571, 1892, 2042
MhlI	GDGCHC	2 cut(s)	850, 1446
MlsI	TGGCCA	1 cut(s)	1546
MluNI	TGGCCA	1 cut(s)	1546
MlyI	GAGTC	2 cut(s)	100, 2550
MmeI	TCCRAC	6 cut(s)	926, 986, 1435, 2091, 2530, 2775
Mox20I	TGGCCA	1 cut(s)	1546
Mph1103I	ATGCAT	2 cut(s)	466, 1932
MroXI	GAANNNNTTC	2 cut(s)	249, 1798
MscI	TGGCCA	1 cut(s)	1546
MseI	TTAA	6 cut(s)	479, 1814, 1980, 2060, 2501, 2568
MslI	CAYNNNNRTG	2 cut(s)	1935, 2696
Msp20I	TGGCCA	1 cut(s)	1546
MspA1I	CMGCKG	1 cut(s)	2189
MspI	CCGG	2 cut(s)	844, 1154
MspR9I	CCNGG	9 cut(s)	151, 844, 845, 1035, 1059, 1155, 1524, 2021, 2390
Mva1269I	GAATGC	2 cut(s)	1195, 2316
MvaI	CCWGG	6 cut(s)	151, 1035, 1059, 1524, 2021, 2390
MvnI	CGCG	1 cut(s)	2276
MwoI	GCNNNNNNNGC	3 cut(s)	1190, 1969, 2305
NciI	CCSGG	3 cut(s)	844, 845, 1155
NcoI	CCATGG	2 cut(s)	1028, 1936
NdeI	CATATG	3 cut(s)	466, 2078, 2621
NmuCI	GTSAC	3 cut(s)	579, 2434, 2801
NsbI	TGCGCA	1 cut(s)	867
NsiI	ATGCAT	2 cut(s)	466, 1932
NspI	RCATGY	7 cut(s)	68, 735, 1564, 1649, 1832, 1963, 2312
PaeI	GCATGC	2 cut(s)	735, 1963
PagI	TCATGA	3 cut(s)	1299, 1372, 2320
PasI	CCCWGGG	1 cut(s)	1523
PceI	AGGCCT	1 cut(s)	1972
PciI	ACATGT	1 cut(s)	1828
PcsI	WCGNNNNNNNCGW	1 cut(s)	100
PctI	GAATGC	2 cut(s)	1195, 2316
PdmI	GAANNNNTTC	2 cut(s)	249, 1798
PfeI	GAWTC	2 cut(s)	305, 1066
PflMI	CCANNNNNTGG	2 cut(s)	516, 1034
PfoI	TCCNGGA	1 cut(s)	1057
PkrI	GCNGC	4 cut(s)	757, 1559, 2278, 2449
PleI	GAGTC	2 cut(s)	99, 2549
PpsI	GAGTC	2 cut(s)	99, 2549
PpuMI	RGGWCCY	2 cut(s)	811, 2591
PscI	ACATGT	1 cut(s)	1828
PshBI	ATTAAT	1 cut(s)	2501
Psp5II	RGGWCCY	2 cut(s)	811, 2591
Psp6I	CCWGG	6 cut(s)	149, 1033, 1057, 1522, 2019, 2388
PspGI	CCWGG	6 cut(s)	149, 1033, 1057, 1522, 2019, 2388
PspOMI	GGGCCC	2 cut(s)	846, 1442
PspPPI	RGGWCCY	2 cut(s)	811, 2591
PstNI	CAGNNNCTG	3 cut(s)	343, 2070, 2395
PsuI	RGATCY	7 cut(s)	12, 160, 898, 1434, 1571, 1892, 2042
PvuII	CAGCTG	1 cut(s)	2189
RsaI	GTAC	4 cut(s)	643, 1047, 1338, 2289
RsaNI	GTAC	4 cut(s)	642, 1046, 1337, 2288
RseI	CAYNNNNRTG	2 cut(s)	1935, 2696
SalI	GTCGAC	1 cut(s)	719
SaqAI	TTAA	6 cut(s)	479, 1814, 1980, 2060, 2501, 2568
SatI	GCNGC	4 cut(s)	756, 1558, 2277, 2448
SchI	GAGTC	2 cut(s)	100, 2550
ScrFI	CCNGG	9 cut(s)	151, 844, 845, 1035, 1059, 1155, 1524, 2021, 2390
SduI	GDGCHC	2 cut(s)	850, 1446
SexAI	ACCWGGT	1 cut(s)	2019
SfcI	CTRYAG	2 cut(s)	436, 705
SinI	GGWCC	4 cut(s)	811, 1306, 2591, 2740
SmaI	CCCGGG	1 cut(s)	845
SmiMI	CAYNNNNRTG	2 cut(s)	1935, 2696
SmlI	CTYRAG	2 cut(s)	2291, 2399
SmoI	CTYRAG	2 cut(s)	2291, 2399
SpeI	ACTAGT	1 cut(s)	2282
SphI	GCATGC	2 cut(s)	735, 1963
SseBI	AGGCCT	1 cut(s)	1972
SsiI	CCGC	2 cut(s)	413, 2276
SspI	AATATT	1 cut(s)	1660
SspMI	CTAG	4 cut(s)	1652, 2283, 2384, 2806
StuI	AGGCCT	1 cut(s)	1972
StyD4I	CCNGG	9 cut(s)	149, 842, 843, 1033, 1057, 1153, 1522, 2019, 2388
StyI	CCWWGG	6 cut(s)	1028, 1078, 1438, 1788, 1936, 2037
TaiI	ACGT	2 cut(s)	106, 922
TaqI	TCGA	6 cut(s)	303, 347, 574, 720, 922, 1282
TatI	WGTACW	2 cut(s)	1336, 2287
TauI	GCSGC	1 cut(s)	2279
TfiI	GAWTC	2 cut(s)	305, 1066
Tru1I	TTAA	6 cut(s)	479, 1814, 1980, 2060, 2501, 2568
Tru9I	TTAA	6 cut(s)	479, 1814, 1980, 2060, 2501, 2568
TscAI	CASTG	6 cut(s)	348, 588, 1956, 2075, 2306, 2437
TseFI	GTSAC	3 cut(s)	579, 2434, 2801
TseI	GCWGC	3 cut(s)	755, 1557, 2447
Tsp45I	GTSAC	3 cut(s)	579, 2434, 2801
TspGWI	ACGGA	2 cut(s)	395, 1874
TspMI	CCCGGG	1 cut(s)	843
TspRI	CASTG	6 cut(s)	348, 588, 1956, 2075, 2306, 2437
Van91I	CCANNNNNTGG	2 cut(s)	516, 1034
VpaK11BI	GGWCC	4 cut(s)	811, 1306, 2591, 2740
VspI	ATTAAT	1 cut(s)	2501
XapI	RAATTY	8 cut(s)	441, 794, 964, 1718, 1730, 1999, 2210, 2553
XceI	RCATGY	7 cut(s)	68, 735, 1564, 1649, 1832, 1963, 2312
XmaI	CCCGGG	1 cut(s)	843
XmiI	GTMKAC	2 cut(s)	708, 720
XmnI	GAANNNNTTC	2 cut(s)	249, 1798
XspI	CTAG	4 cut(s)	1652, 2283, 2384, 2806
Zsp2I	ATGCAT	2 cut(s)	466, 1932

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.