pycom05g02070

Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Forward (+)
2382153 .. 2384135
1983 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g02070.2

Sequence Viewer

Length: 1449 bp
ATGGGATTGATCTTCACGATAGATACTCAAATCGCAACGTTGTATTCTTTGATCAATATGAAAGGTTTAGATGGGATCCAAGGGCCCATTTACGTCGGAACTGGGTGTGTCTTCCGAAGGCAGGCACTCTATGGATTTGATGCTCCTACCAAGAAAAAACCACCAGGGAAGACCTGTAATTGTTGGCCAAAATGGTGCTGCATGTGTTGTCGATCTAGAAAGAAAAACAAGAAATCCAAGTCAAACGATAAAAAGAAGAAGACCAAGGATACCTCAAAGCAGATACACGCACTAGAAAATATTCAGGAGGGGATTGAAGGAATAGATAATGAAAAGGCATCCCTGATTCCCCAAATAAAATTTGAGAAAAAGTTTGGACAGTCGCCGGTTTTCATTGCTTCGACACTTATGGAAGATGGTGGAGTTCCAAAGGGAACAAGTTCTGCATCACTCTTGAAAGAAGCCATCCACGTCATTAGTTGTGGCTACGAAGATAAATCGGAATGGGGGAAAGAGGTTGGTTGGATCTATGGCTCTGTTACAGAGGATATACTAACAGGATTCAAGATGCATTGTCATGGTTGGCGATCCGTGTATTGCATGCCCAAGAGGCCTGCATTCAAGGGTTCTGCTCCTATTAACTTGTCAGATCGGCTTCACCAGGTGCTTCGGTGGGCTTTGGGATCTGTTGAAATTTTGTTGAGCAGGCATTGCCCTATTTGGTATGGATATGGGTGTGGCTTGAAATGGTTGGAGCGCTTTTCTTATATAAACTCGGTTGTTTATCCTTTGACATCCATCCCCTTGCTTGCCTACTGTTCCTTGCCGGCTGTCTGTCTCCTTACTGGGAAATTTATTGTCCCTGAGATTAGCAACTATGCCAGCATCCTTTTTATGGCTCTCTTTTTGTCCATTGCTGCAACGAGCATACTTGAGATGCAGTGGGGACATGTTGGCATCCACGACTGGTGGAGGAATGAACAGTTCTGGGTGATTGGAGGTGCGTCATCACACTTCTTCGCACTCATCCAGGGTCTGCTCAAGGTTTTGGGTGGTGTGAACACAAACTTCACTGTCACATCAAAAGCAGCAGATGATGGAGAGTTTTCCGACCTATACCTCTTCAAGTGGACGTCACTTTTGATCCCGCCCATGACCTTATTGATCATAAACATAATTGGAGTCGTAGTTGGAATTTCAGATGCCATCAACAATGGTTACGAAACATGGGGTCCTCTCTTTGGTAGGCTGTTCTTTGCCATTTGGGTCATCGTCCATCTCTACCCCTTCCTAAAAGGTTTGGTGGGAAGACATGAGAGGCTTCCGACCATCATTGTGGTGTGGTCAATTCTTCTGGCATCCATATTCTCCCTGCTGTGGGTGCGAATCAATCCATTTGTGAATAAAGGTGGCATTGTACTAGAAGTTTGCGGGCTGGATTGTAACTGA

Protein Analysis

483

Amino Acids

53.87

Weight (kDa)

9.02

Isoelectric Point (pI)

31.43

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1136
AciI CCGC 2 cut(s) 1148, 1431
AclI AACGTT 1 cut(s) 38
AclWI GGATC 6 cut(s) 70, 83, 533, 582, 691, 1138
AcoI YGGCCR 1 cut(s) 185
AcsI RAATTY 4 cut(s) 359, 693, 851, 1194
AcyI GRCGYC 1 cut(s) 1133
AdeI CACNNNGTG 1 cut(s) 664
AfaI GTAC 1 cut(s) 1419
AfeI AGCGCT 1 cut(s) 758
AfiI CCNNNNNNNGG 5 cut(s) 121, 895, 1241, 1377, 1378
AflIII ACRYGT 1 cut(s) 949
AgsI TTSAA 7 cut(s) 317, 457, 565, 622, 692, 745, 1126
AjiI CACGTC 1 cut(s) 472
AjnI CCWGG 3 cut(s) 163, 660, 1029
Alw26I GTCTC 1 cut(s) 842
AlwI GGATC 6 cut(s) 70, 83, 533, 582, 691, 1138
AlwNI CAGNNNCTG 1 cut(s) 1036
Aor51HI AGCGCT 1 cut(s) 758
AoxI GGCC 3 cut(s) 83, 185, 611
ApaI GGGCCC 1 cut(s) 87
ApeKI GCWGC 3 cut(s) 198, 917, 1088
ApoI RAATTY 4 cut(s) 359, 693, 851, 1194
ArsI GACNNNNNNTTYG 2 cut(s) 1123, 1155
Asp700I GAANNNNTTC 2 cut(s) 300, 439
AspLEI GCGC 1 cut(s) 759
AspS9I GGNCC 3 cut(s) 83, 84, 1232
AsuHPI GGTGA 2 cut(s) 650, 1003
AvaII GGWCC 1 cut(s) 1232
BaeGI GKGCMC 1 cut(s) 87
BalI TGGCCA 1 cut(s) 187
BamHI GGATCC 1 cut(s) 75
BanII GRGCYC 1 cut(s) 87
BbsI GAAGAC 4 cut(s) 103, 176, 266, 1315
BbvI GCAGC 3 cut(s) 185, 904, 1100
BccI CCATC 8 cut(s) 65, 410, 473, 806, 1091, 1214, 1284, 1337
BciT130I CCWGG 3 cut(s) 165, 662, 1031
BciVI GTATCC 1 cut(s) 262
BclI TGATCA 2 cut(s) 51, 1164
BcoDI GTCTC 1 cut(s) 842
BfaI CTAG 3 cut(s) 216, 293, 1421
BfoI RGCGCY 1 cut(s) 760
BfuI GTATCC 1 cut(s) 262
BglI GCCNNNNNGGC 1 cut(s) 610
BisI GCNGC 3 cut(s) 199, 918, 1089
BlsI GCNGC 3 cut(s) 200, 919, 1090
Bme1390I CCNGG 3 cut(s) 165, 662, 1031
Bme18I GGWCC 1 cut(s) 1232
BmgBI CACGTC 1 cut(s) 472
BmgT120I GGNCC 3 cut(s) 83, 84, 1232
BmiI GGNNCC 3 cut(s) 77, 85, 1233
BmrFI CCNGG 3 cut(s) 165, 662, 1031
BmrI ACTGGG 2 cut(s) 111, 855
BmsI GCATC 9 cut(s) 130, 347, 455, 558, 894, 927, 966, 1192, 1367
BmuI ACTGGG 2 cut(s) 111, 855
BpiI GAAGAC 4 cut(s) 103, 176, 266, 1315
BpuEI CTTGAG 2 cut(s) 953, 1025
BsaHI GRCGYC 1 cut(s) 1133
BsaJI CCNNGG 4 cut(s) 79, 164, 264, 1030
BsaXI ACNNNNNCTCC 2 cut(s) 1173, 1203
Bsc4I CCNNNNNNNGG 5 cut(s) 121, 895, 1241, 1377, 1378
Bse118I RCCGGY 2 cut(s) 385, 826
Bse1I ACTGG 3 cut(s) 106, 850, 971
Bse3DI GCAATG 3 cut(s) 393, 709, 912
BseBI CCWGG 3 cut(s) 165, 662, 1031
BseDI CCNNGG 4 cut(s) 79, 164, 264, 1030
BseGI GGATG 8 cut(s) 338, 465, 794, 798, 885, 957, 1026, 1358
BseLI CCNNNNNNNGG 5 cut(s) 121, 895, 1241, 1377, 1378
BseMI GCAATG 3 cut(s) 393, 709, 912
BseMII CTCAG 1 cut(s) 855
BseNI ACTGG 3 cut(s) 106, 850, 971
BseSI GKGCMC 1 cut(s) 87
BseXI GCAGC 3 cut(s) 185, 904, 1100
BshFI GGCC 3 cut(s) 85, 187, 613
BsiSI CCGG 2 cut(s) 386, 827
BslFI GGGAC 2 cut(s) 845, 960
BslI CCNNNNNNNGG 5 cut(s) 121, 895, 1241, 1377, 1378
BsmAI GTCTC 1 cut(s) 842
BsmFI GGGAC 2 cut(s) 845, 960
BsmI GAATGC 1 cut(s) 617
BsnI GGCC 3 cut(s) 85, 187, 613
Bsp120I GGGCCC 1 cut(s) 83
Bsp1286I GDGCHC 1 cut(s) 87
BspACI CCGC 2 cut(s) 1148, 1431
BspANI GGCC 3 cut(s) 85, 187, 613
BspCNI CTCAG 1 cut(s) 856
BspLI GGNNCC 3 cut(s) 77, 85, 1233
BspPI GGATC 6 cut(s) 70, 83, 533, 582, 691, 1138
BsrDI GCAATG 3 cut(s) 393, 709, 912
BsrFI RCCGGY 2 cut(s) 385, 826
BsrI ACTGG 3 cut(s) 106, 850, 971
BssAI RCCGGY 2 cut(s) 385, 826
BssECI CCNNGG 4 cut(s) 79, 164, 264, 1030
BssNI GRCGYC 1 cut(s) 1133
BssT1I CCWWGG 2 cut(s) 79, 264
Bst2UI CCWGG 3 cut(s) 165, 662, 1031
Bst4CI ACNGT 4 cut(s) 381, 818, 984, 1075
Bst6I CTCTTC 1 cut(s) 1127
BstACI GRCGYC 1 cut(s) 1133
BstAPI GCANNNNNTGC 1 cut(s) 711
BstC8I GCNNGC 8 cut(s) 123, 602, 615, 707, 810, 828, 883, 1433
BstDEI CTNAG 1 cut(s) 864
BstF5I GGATG 8 cut(s) 338, 465, 794, 798, 885, 957, 1026, 1358
BstH2I RGCGCY 1 cut(s) 760
BstHHI GCGC 1 cut(s) 759
BstMAI GTCTC 1 cut(s) 842
BstMWI GCNNNNNNNGC 3 cut(s) 610, 711, 1381
BstNI CCWGG 3 cut(s) 165, 662, 1031
BstNSI RCATGY 3 cut(s) 205, 604, 953
BstSCI CCNGG 3 cut(s) 163, 660, 1029
BstSLI GKGCMC 1 cut(s) 87
BstV1I GCAGC 3 cut(s) 185, 904, 1100
BstV2I GAAGAC 4 cut(s) 103, 176, 266, 1315
BstX2I RGATCY 3 cut(s) 75, 525, 683
BstXI CCANNNNNNTGG 1 cut(s) 1336
BstYI RGATCY 3 cut(s) 75, 525, 683
BsuI GTATCC 1 cut(s) 262
BsuRI GGCC 3 cut(s) 85, 187, 613
BtrI CACGTC 1 cut(s) 472
BtsCI GGATG 8 cut(s) 338, 465, 794, 798, 885, 957, 1026, 1358
BtsI GCAGTG 1 cut(s) 947
BtsIMutI CAGTG 2 cut(s) 947, 1071
Cac8I GCNNGC 8 cut(s) 123, 602, 615, 707, 810, 828, 883, 1433
CaiI CAGNNNCTG 1 cut(s) 1036
CfoI GCGC 1 cut(s) 759
Cfr10I RCCGGY 2 cut(s) 385, 826
Cfr13I GGNCC 3 cut(s) 83, 84, 1232
CseI GACGC 1 cut(s) 993
CsiI ACCWGGT 1 cut(s) 660
Csp6I GTAC 1 cut(s) 1418
CviAII CATG 7 cut(s) 202, 578, 601, 950, 1153, 1227, 1313
CviQI GTAC 1 cut(s) 1418
DdeI CTNAG 1 cut(s) 864
DraIII CACNNNGTG 1 cut(s) 664
EaeI YGGCCR 1 cut(s) 185
Eam1104I CTCTTC 1 cut(s) 1127
EarI CTCTTC 1 cut(s) 1127
Eco130I CCWWGG 2 cut(s) 79, 264
Eco147I AGGCCT 1 cut(s) 613
Eco24I GRGCYC 1 cut(s) 87
Eco47I GGWCC 1 cut(s) 1232
Eco47III AGCGCT 1 cut(s) 758
EcoO109I RGGNCCY 2 cut(s) 83, 1232
EcoRII CCWGG 3 cut(s) 163, 660, 1029
EcoT14I CCWWGG 2 cut(s) 79, 264
EcoT22I ATGCAT 1 cut(s) 573
EcoT38I GRGCYC 1 cut(s) 87
ErhI CCWWGG 2 cut(s) 79, 264
FaeI CATG 7 cut(s) 205, 581, 604, 953, 1156, 1230, 1316
FaqI GGGAC 2 cut(s) 845, 960
FatI CATG 7 cut(s) 201, 577, 600, 949, 1152, 1226, 1312
FauI CCCGC 2 cut(s) 1155, 1424
FbaI TGATCA 2 cut(s) 51, 1164
Fnu4HI GCNGC 3 cut(s) 199, 918, 1089
FokI GGATG 8 cut(s) 325, 452, 781, 785, 872, 944, 1013, 1345
FriOI GRGCYC 1 cut(s) 87
Fsp4HI GCNGC 3 cut(s) 199, 918, 1089
FspBI CTAG 3 cut(s) 216, 293, 1421
GlaI GCGC 1 cut(s) 758
GluI GCNGC 3 cut(s) 199, 918, 1089
HaeII RGCGCY 1 cut(s) 760
HaeIII GGCC 3 cut(s) 85, 187, 613
HapII CCGG 2 cut(s) 386, 827
HgaI GACGC 1 cut(s) 993
HhaI GCGC 1 cut(s) 759
Hin1I GRCGYC 1 cut(s) 1133
Hin1II CATG 7 cut(s) 205, 581, 604, 953, 1156, 1230, 1316
Hin6I GCGC 1 cut(s) 757
HinP1I GCGC 1 cut(s) 757
HinfI GANTC 4 cut(s) 346, 561, 1182, 1386
HpaII CCGG 2 cut(s) 386, 827
HphI GGTGA 2 cut(s) 650, 1003
Hpy166II GTNNAC 2 cut(s) 1060, 1131
Hpy188I TCNGA 7 cut(s) 98, 116, 502, 649, 1111, 1201, 1326
Hpy188III TCNNGA 5 cut(s) 16, 216, 305, 454, 565
Hpy8I GTNNAC 2 cut(s) 1060, 1131
Hpy99I CGWCG 1 cut(s) 98
HpyAV CCTTC 3 cut(s) 111, 311, 1297
HpyCH4III ACNGT 4 cut(s) 381, 818, 984, 1075
HpyCH4IV ACGT 4 cut(s) 38, 93, 471, 1133
HpyCH4V TGCA 7 cut(s) 201, 446, 571, 600, 617, 920, 940
HpyF10VI GCNNNNNNNGC 3 cut(s) 610, 711, 1381
HpyF3I CTNAG 1 cut(s) 864
HpySE526I ACGT 4 cut(s) 38, 93, 471, 1133
Hsp92I GRCGYC 1 cut(s) 1133
Hsp92II CATG 7 cut(s) 205, 581, 604, 953, 1156, 1230, 1316
HspAI GCGC 1 cut(s) 757
KroI GCCGGC 1 cut(s) 826
KroNI GCCGGC 1 cut(s) 828
Ksp22I TGATCA 2 cut(s) 51, 1164
LmnI GCTCC 3 cut(s) 148, 637, 754
Lsp1109I GCAGC 3 cut(s) 185, 904, 1100
LweI GCATC 9 cut(s) 130, 347, 455, 558, 894, 927, 966, 1192, 1367
MabI ACCWGGT 1 cut(s) 660
MaeI CTAG 3 cut(s) 216, 293, 1421
MaeII ACGT 4 cut(s) 38, 93, 471, 1133
MaeIII GTNAC 5 cut(s) 538, 1075, 1134, 1217, 1442
MflI RGATCY 3 cut(s) 75, 525, 683
MhlI GDGCHC 1 cut(s) 87
MlsI TGGCCA 1 cut(s) 187
MluCI AATT 7 cut(s) 178, 359, 693, 851, 1176, 1194, 1347
MluNI TGGCCA 1 cut(s) 187
MlyI GAGTC 1 cut(s) 1191
MmeI TCCRAC 6 cut(s) 76, 503, 732, 1134, 1171, 1349
Mox20I TGGCCA 1 cut(s) 187
Mph1103I ATGCAT 1 cut(s) 573
MroNI GCCGGC 1 cut(s) 826
MroXI GAANNNNTTC 2 cut(s) 300, 439
MscI TGGCCA 1 cut(s) 187
MseI TTAA 1 cut(s) 639
MslI CAYNNNNRTG 3 cut(s) 576, 1334, 1337
Msp20I TGGCCA 1 cut(s) 187
MspI CCGG 2 cut(s) 386, 827
MspR9I CCNGG 3 cut(s) 165, 662, 1031
Mva1269I GAATGC 1 cut(s) 617
MvaI CCWGG 3 cut(s) 165, 662, 1031
MwoI GCNNNNNNNGC 3 cut(s) 610, 711, 1381
NaeI GCCGGC 1 cut(s) 828
NgoMIV GCCGGC 1 cut(s) 826
NlaIII CATG 7 cut(s) 205, 581, 604, 953, 1156, 1230, 1316
NlaIV GGNNCC 3 cut(s) 77, 85, 1233
NmuCI GTSAC 2 cut(s) 1075, 1134
NsiI ATGCAT 1 cut(s) 573
NspI RCATGY 3 cut(s) 205, 604, 953
PaeI GCATGC 1 cut(s) 604
PceI AGGCCT 1 cut(s) 613
PciI ACATGT 1 cut(s) 949
PctI GAATGC 1 cut(s) 617
PdiI GCCGGC 1 cut(s) 828
PdmI GAANNNNTTC 2 cut(s) 300, 439
PfeI GAWTC 3 cut(s) 346, 561, 1386
PkrI GCNGC 3 cut(s) 200, 919, 1090
PleI GAGTC 1 cut(s) 1190
PpsI GAGTC 1 cut(s) 1190
PpuMI RGGWCCY 1 cut(s) 1232
PscI ACATGT 1 cut(s) 949
Psp1406I AACGTT 1 cut(s) 38
Psp5II RGGWCCY 1 cut(s) 1232
Psp6I CCWGG 3 cut(s) 163, 660, 1029
PspGI CCWGG 3 cut(s) 163, 660, 1029
PspN4I GGNNCC 3 cut(s) 77, 85, 1233
PspOMI GGGCCC 1 cut(s) 83
PspPI GGNCC 3 cut(s) 83, 84, 1232
PspPPI RGGWCCY 1 cut(s) 1232
PstNI CAGNNNCTG 1 cut(s) 1036
PsuI RGATCY 3 cut(s) 75, 525, 683
RsaI GTAC 1 cut(s) 1419
RsaNI GTAC 1 cut(s) 1418
RseI CAYNNNNRTG 3 cut(s) 576, 1334, 1337
SaqAI TTAA 1 cut(s) 639
SatI GCNGC 3 cut(s) 199, 918, 1089
Sau96I GGNCC 3 cut(s) 83, 84, 1232
SchI GAGTC 1 cut(s) 1191
ScrFI CCNGG 3 cut(s) 165, 662, 1031
SduI GDGCHC 1 cut(s) 87
SexAI ACCWGGT 1 cut(s) 660
SfaNI GCATC 9 cut(s) 130, 347, 455, 558, 894, 927, 966, 1192, 1367
SinI GGWCC 1 cut(s) 1232
SmiMI CAYNNNNRTG 3 cut(s) 576, 1334, 1337
SmlI CTYRAG 2 cut(s) 932, 1040
SmoI CTYRAG 2 cut(s) 932, 1040
SphI GCATGC 1 cut(s) 604
Sse9I AATT 7 cut(s) 178, 359, 693, 851, 1176, 1194, 1347
SseBI AGGCCT 1 cut(s) 613
SsiI CCGC 2 cut(s) 1148, 1431
SspI AATATT 1 cut(s) 301
SspMI CTAG 3 cut(s) 216, 293, 1421
StuI AGGCCT 1 cut(s) 613
StyD4I CCNGG 3 cut(s) 163, 660, 1029
StyI CCWWGG 2 cut(s) 79, 264
TaaI ACNGT 4 cut(s) 381, 818, 984, 1075
TaiI ACGT 4 cut(s) 41, 96, 474, 1136
TaqI TCGA 2 cut(s) 211, 401
TasI AATT 7 cut(s) 178, 359, 693, 851, 1176, 1194, 1347
TatI WGTACW 1 cut(s) 1417
TfiI GAWTC 3 cut(s) 346, 561, 1386
Tru1I TTAA 1 cut(s) 639
Tru9I TTAA 1 cut(s) 639
TscAI CASTG 2 cut(s) 947, 1078
TseFI GTSAC 2 cut(s) 1075, 1134
TseI GCWGC 3 cut(s) 198, 917, 1088
Tsp45I GTSAC 2 cut(s) 1075, 1134
TspDTI ATGAA 4 cut(s) 74, 345, 382, 993
TspGWI ACGGA 1 cut(s) 580
TspRI CASTG 2 cut(s) 947, 1078
VpaK11BI GGWCC 1 cut(s) 1232
XapI RAATTY 4 cut(s) 359, 693, 851, 1194
XbaI TCTAGA 1 cut(s) 215
XceI RCATGY 3 cut(s) 205, 604, 953
XmnI GAANNNNTTC 2 cut(s) 300, 439
XspI CTAG 3 cut(s) 216, 293, 1421
ZraI GACGTC 1 cut(s) 1134
Zsp2I ATGCAT 1 cut(s) 573
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.