Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6C

Orthogroup ID

OG0000892

Physical Location & Seq

Genomic Coordinates Reverse (-)

34335081 .. 34342052

Gene Structure 6972 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6CG206300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2367 bp

ATGGACACCAATGGAAGACTGGTTGCTGGTTCTCATAACAGGAATGAGTTTGTTCTCATCAATGCTGATGAAGTTTCTAGAGTAACATCTGTTAAAGAACTGAGTGGGCAGATTTGCCAGATCTGTGGTGATGAAATAGAATTTACAGTGAATGGGGAGCCTTTTGTTGCTTGCAATGAATGTGCCTTCCCTGTTTGCAGATCTTGCTATGAGTATGAAAGAAGAGAAGGCAATCAATCATGTCCCCAATGCAAAACCAGATACAAGAGAGTTAAAGGGAGTGCAAGAGTTGAAGGAGATGAAGAAGAGGATGATATTGATGATTTGGAGAATGAGTTTGACATTGCAAGCAATGACAGGAGAGACCCTCACCAAATTGCTGCAGCGGTGCTGGCTGCTCGCCTTAATATTGGCCGGGGTTCCCAAGTCCACGGTTCGGGGATTAGTACACCGGCTGAGTTTGATACTGCATCCATGGCTTCAGAAATCCCTCTCCTGACCTATGGACAAGAGGATGTTGGGATTGCATCTGATAAACATGCCCTCATTATTCCCCCATTTATGAGTCGTGGAAAACGTGTTCATCCTATGCCATCTGCTGATGCCTCCATGTCATTTCCACCCAGGCCAATGGATCCTAAGAAAGACTTAGCTGTATATGGGTACGGAACTGTTGCATGGAAGGAGCGAATGGAGGAATGGAAGAAGAAGCAAAATGAAAAGCTTCAGGTGGTGAAGCACGAAGGAGGAAATGGTGGTGGAAACAATGAGCCAATCGATTCTGATTTACCCAAGATGGATGAAGGCAGACAGCCACTGTCGAGGAAGTTGCCTATTCCTTCAAGCAAGATAAATCCATATAGAATGATCATCCTACTCCGTCTTGCGGTTCTTGGCCTATTTTTTCACTATAGAATTCTTCATCCAGTCAACGATGCATATGGATTGTGGTTAACATCTGTAATATGTGAGATTTGGTTTGCCATGTCATGGATATTGGATCAGTTTCCCAAATGGCATCCGATTGAGAGAGAAACATACCTTGATCGATTGTCACTGAGGTATGAGAAGGAAGGGAAGACATCTGGGTTAGCTGACATAGACATCTTTGTTAGTACGGTTGATCCTACAAAGGAGCCTCCACTTATCACCGCAAACACGGTTCTGTCCATCCTTGCTGTAGACTATCCAGTCGACAAAGTTGCATGCTATGTCTCAGATGATGGTGCTGCCATGCTCACTTTTGAAGCTCTTTCAGAGACATCTGAATTTGCAAGAAAGTGGGTCCCTTTCTGCAAGAAGTTCAACATTGAACCCCGGGCCCCAGAGTGGTATTTTGCGCAAAAAGTTGACTATTTGAGAGATAAAGTAGATCCAACATTTGTCAGGGAACGTCGAGCCATGAAGAGGGATTATGAAGAGTTCAAAGTTCGGATAAATTCGTTGGTTGCCACAGCACAGAAGGTTCCCGAGGAGGGTTGGACAATGCAGGATGGGTCTCCATGGCCTGGCAACAATGTACGGGATCATCCTGGAATGATTCAGGTTTTCCTTGGGCAAAATGGTTTTCGTGATATTGAAGGCAATGAGTTACCCCGTTTGGTTTATGTGTCTCGTGAGAAGAGACCGGGTTTTGATCATCACAAAAAGGCTGGCGCTATGAATGCTCTGATACGGGTGTCAGCAGTAGTCTCAAATGCTCCTTACATACTCAATGTTGACTGTGATCACTATATAAACAACAGCAAAGCACTTCGAGAAGCAATGTGCTTCATGATGGACCCCACATCAGGAAAGAAAATCTGTTACGTACAGTTTCCTCAAAGATTTGATGGGATTGATCTTCATGACAGATACTCAAATCGCAATGTTGTTTTCTTTGATATCAATATGAAAGGTTTAGATGGGATCCAAGGGCCCATTTATGTTGGAACTGGTTGTGTCTTCCGAAGGCAGGCCCTTTATGGATATGATGCTCCTGTGAAGAAGAAAGCCCCAGGGAAGACTTGTAATTGTTGGCCAAAATGGTGCTGCATGTGTTGTGGATCCAGAAAGACCAAGAAAAAAGCAAAGTCTAATGATAAAAAGAAAAAGAACAGGGAGGCTTCAAAGCAGATACATGCACTAGAGAATATTCAGGAGGGTGTTGAAGGAATAGATAATGAAAAATCATCCCTGATGCCCCAAATAAAATTTGAGAAAAAATTTGGACAATCGCCAGTTTTCATAGCTTCTTCACTTATGGAAGACGGTGGAGTTCCCAAGGGAACAAGTTCTGCATCACTCTTAAAAGAAGCCATACATGTCATTAGTTGTGGCTATGAAGATAAAACGGAATGGGGAAAGGAGGTATGCTGCACCATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0000271 GO:0000278 GO:0000281 GO:0000910 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005886 GO:0005887 GO:0005975 GO:0005976 GO:0006073 GO:0006996 GO:0007010 GO:0007017 GO:0007049 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009825 GO:0009832 GO:0009833 GO:0009987 GO:0010330 GO:0012505 GO:0016020 GO:0016021 GO:0016043 GO:0016049 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0016759 GO:0022402 GO:0030243 GO:0030244 GO:0030865 GO:0031122 GO:0031224 GO:0031226 GO:0032991 GO:0033692 GO:0034637 GO:0034645 GO:0040007 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043622 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0046527 GO:0051273 GO:0051274 GO:0051301 GO:0061640 GO:0071554 GO:0071669 GO:0071704 GO:0071840 GO:0071944 GO:0097435 GO:1901576 GO:1902494 GO:1903047 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulose_synt zf-UDP

Protein Analysis

788

Amino Acids

88.9

Weight (kDa)

6.96

Isoelectric Point (pI)

42.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-UDP	PF14569	30 - 105	2.5e-41	Zinc-binding RING-finger
Cellulose_synt	PF03552	367 - 784	7.1e-228	Cellulose synthase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000892)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G21770 AT4G39350 AT5G09870 AT5G64740
fragaria_vesca	FvH4_1g23890 FvH4_1g23890 FvH4_1g23890 FvH4_1g23890 FvH4_1g23890 FvH4_2g13380 FvH4_2g13380 FvH4_2g13380 FvH4_2g13380 FvH4_2g13380 FvH4_5g26830 FvH4_5g26830 FvH4_5g26830
malus_domestica	MD00G1146900.v1.1 MD05G1029400.v1.1 MD10G1029800.v1.1 MD15G1340200.v1.1
prunus_persica	Prupe.5G000300_v2.0.a1 Prupe.5G000300_v2.0.a1 Prupe.5G000300_v2.0.a1 Prupe.6G161300_v2.0.a1 Prupe.6G161300_v2.0.a1 Prupe.8G035100_v2.0.a1
pyrus_communis	pycom01g03410 pycom01g03420 pycom01g03470 pycom05g02060 pycom05g02070 pycom15g29990
rosa_chinensis	RchiOBHm_Chr2g0119881 RchiOBHm_Chr6g0274931 RchiOBHm_Chr7g0217741
rosa_laevigata	RLG00000002442 RLG00000013507 RLG00000018496
rosa_multiflora	Rmu_sc0000202.1_g000022 Rmu_sc0001501.1_g000028 Rmu_sc0007760.1_g000002
rosa_roxburghii	Rroxscaffold_2G00124010 Rroxscaffold_3G00241720 Rroxscaffold_7G00193790
rosa_rugosa	Rorug02G0224300 Rorug02G0224400 Rorug02G0224500 Rorug06G0086400 Rorug06G0086500 Rorug07G0170900.1
rosa_samantha	Rh2AG282100 Rh2BG293400 Rh2DG288300 Rh2DG307400 Rh6AG201300 Rh6BG204900 Rh6CG206300 Rh6DG196400 Rh7AG311600 Rh7BG303500 Rh7CG330400
rosa_wichuraiana	Rw2G022520 Rw6G017510 Rw7G026440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1190
Acc16I	TGCGCA	1 cut(s)	1341
AccB7I	CCANNNNNTGG	2 cut(s)	990, 1508
AccI	GTMKAC	2 cut(s)	1182, 1194
AciI	CCGC	3 cut(s)	386, 887, 1152
AcoI	YGGCCR	2 cut(s)	412, 2018
AcsI	RAATTY	6 cut(s)	140, 915, 1268, 1438, 2192, 2204
AcuI	CTGAAG	2 cut(s)	465, 710
AfaI	GTAC	5 cut(s)	448, 665, 1117, 1521, 1812
AfiI	CCNNNNNNNGG	9 cut(s)	436, 886, 990, 1329, 1407, 1475, 1508, 1790, 1954
AflIII	ACRYGT	2 cut(s)	577, 2302
AgsI	TTSAA	9 cut(s)	293, 843, 1247, 1306, 1313, 1426, 1580, 2109, 2150
AjnI	CCWGG	4 cut(s)	623, 1507, 1531, 1996
AloI	GAACNNNNNNTCC	2 cut(s)	564, 596
AluBI	AGCT	5 cut(s)	653, 724, 1094, 1250, 2231
AluI	AGCT	5 cut(s)	653, 724, 1094, 1250, 2231
Alw26I	GTCTC	7 cut(s)	357, 1219, 1253, 1503, 1617, 1618, 1696
AlwNI	CAGNNNCTG	1 cut(s)	817
Ama87I	CYCGRG	2 cut(s)	1317, 1469
AoxI	GGCC	8 cut(s)	412, 626, 895, 1320, 1505, 1916, 1956, 2018
ApaI	GGGCCC	2 cut(s)	1324, 1920
ApeKI	GCWGC	6 cut(s)	380, 383, 395, 1229, 2031, 2355
ApoI	RAATTY	6 cut(s)	140, 915, 1268, 1438, 2192, 2204
Asp700I	GAANNNNTTC	2 cut(s)	723, 2272
AspLEI	GCGC	2 cut(s)	1342, 1658
AspS9I	GGNCC	7 cut(s)	1285, 1320, 1321, 1780, 1916, 1917, 1957
AsuC2I	CCSGG	4 cut(s)	416, 1318, 1319, 1629
AsuHPI	GGTGA	4 cut(s)	140, 362, 745, 1141
AvaI	CYCGRG	2 cut(s)	1317, 1469
AvaII	GGWCC	2 cut(s)	1285, 1780
BaeGI	GKGCMC	2 cut(s)	1324, 1920
BaeI	ACNNNNGTAYC	2 cut(s)	1664, 1697
BalI	TGGCCA	1 cut(s)	2020
BamHI	GGATCC	3 cut(s)	634, 1908, 2045
BanII	GRGCYC	2 cut(s)	1324, 1920
BauI	CACGAG	1 cut(s)	1614
BbsI	GAAGAC	5 cut(s)	22, 1085, 1936, 2009, 2253
BbvI	GCAGC	6 cut(s)	367, 382, 395, 1216, 2018, 2342
BccI	CCATC	8 cut(s)	601, 790, 1178, 1217, 1487, 1771, 1826, 1898
BcgI	CGANNNNNNTGC	4 cut(s)	811, 845, 1184, 1218
BciT130I	CCWGG	4 cut(s)	625, 1509, 1533, 1998
BclI	TGATCA	3 cut(s)	867, 1636, 1726
BcnI	CCSGG	4 cut(s)	416, 1318, 1319, 1629
BcoDI	GTCTC	7 cut(s)	357, 1219, 1253, 1503, 1617, 1618, 1696
BfaI	CTAG	2 cut(s)	78, 2126
BfmI	CTRYAG	3 cut(s)	381, 910, 1179
BfoI	RGCGCY	1 cut(s)	1659
BglII	AGATCT	2 cut(s)	120, 200
BisI	GCNGC	6 cut(s)	381, 384, 396, 1230, 2032, 2356
BlsI	GCNGC	6 cut(s)	382, 385, 397, 1231, 2033, 2357
Bme1390I	CCNGG	8 cut(s)	416, 625, 1318, 1319, 1509, 1533, 1629, 1998
Bme18I	GGWCC	2 cut(s)	1285, 1780
BmeT110I	CYCGRG	2 cut(s)	1317, 1469
BmgT120I	GGNCC	7 cut(s)	1285, 1320, 1321, 1780, 1916, 1917, 1957
BmrFI	CCNGG	8 cut(s)	416, 625, 1318, 1319, 1509, 1533, 1629, 1998
BmsI	GCATC	8 cut(s)	479, 536, 592, 925, 1027, 1963, 2169, 2288
BpiI	GAAGAC	5 cut(s)	22, 1085, 1936, 2009, 2253
BplI	GAGNNNNNCTC	2 cut(s)	352, 384
BpuMI	CCSGG	4 cut(s)	416, 1318, 1319, 1629
Bsa29I	ATCGAT	2 cut(s)	777, 1048
BsaAI	YACGTR	1 cut(s)	1810
BsaI	GGTCTC	3 cut(s)	357, 1503, 1618
BsaXI	ACNNNNNCTCC	2 cut(s)	320, 350
Bsc4I	CCNNNNNNNGG	9 cut(s)	436, 886, 990, 1329, 1407, 1475, 1508, 1790, 1954
Bse118I	RCCGGY	1 cut(s)	451
Bse1I	ACTGG	5 cut(s)	24, 926, 1190, 1939, 2219
Bse3DI	GCAATG	6 cut(s)	181, 342, 358, 1591, 1770, 1873
BseBI	CCWGG	4 cut(s)	625, 1509, 1533, 1998
BseCI	ATCGAT	2 cut(s)	777, 1048
BseLI	CCNNNNNNNGG	9 cut(s)	436, 886, 990, 1329, 1407, 1475, 1508, 1790, 1954
BseMI	GCAATG	6 cut(s)	181, 342, 358, 1591, 1770, 1873
BseMII	CTCAG	4 cut(s)	92, 447, 1049, 1230
BseNI	ACTGG	5 cut(s)	24, 926, 1190, 1939, 2219
BseRI	GAGGAG	1 cut(s)	1487
BseSI	GKGCMC	2 cut(s)	1324, 1920
BseXI	GCAGC	6 cut(s)	367, 382, 395, 1216, 2018, 2342
BsgI	GTGCAG	1 cut(s)	2341
BshFI	GGCC	8 cut(s)	414, 628, 897, 1322, 1507, 1918, 1958, 2020
BshVI	ATCGAT	2 cut(s)	777, 1048
BsiHKCI	CYCGRG	2 cut(s)	1317, 1469
BsiSI	CCGG	4 cut(s)	415, 452, 1318, 1628
BslFI	GGGAC	2 cut(s)	228, 1271
BslI	CCNNNNNNNGG	9 cut(s)	436, 886, 990, 1329, 1407, 1475, 1508, 1790, 1954
BsmAI	GTCTC	7 cut(s)	357, 1219, 1253, 1503, 1617, 1618, 1696
BsmFI	GGGAC	2 cut(s)	228, 1271
BsmI	GAATGC	1 cut(s)	1669
BsnI	GGCC	8 cut(s)	414, 628, 897, 1322, 1507, 1918, 1958, 2020
Bso31I	GGTCTC	3 cut(s)	357, 1503, 1618
BsoBI	CYCGRG	2 cut(s)	1317, 1469
Bsp120I	GGGCCC	2 cut(s)	1320, 1916
Bsp1286I	GDGCHC	2 cut(s)	1324, 1920
Bsp19I	CCATGG	2 cut(s)	474, 1502
BspACI	CCGC	3 cut(s)	386, 887, 1152
BspANI	GGCC	8 cut(s)	414, 628, 897, 1322, 1507, 1918, 1958, 2020
BspCNI	CTCAG	4 cut(s)	93, 448, 1050, 1229
BspDI	ATCGAT	2 cut(s)	777, 1048
BspHI	TCATGA	2 cut(s)	1773, 1846
BspMAI	CTGCAG	1 cut(s)	385
BspTNI	GGTCTC	3 cut(s)	357, 1503, 1618
BsrDI	GCAATG	6 cut(s)	181, 342, 358, 1591, 1770, 1873
BsrFI	RCCGGY	1 cut(s)	451
BsrI	ACTGG	5 cut(s)	24, 926, 1190, 1939, 2219
BssAI	RCCGGY	1 cut(s)	451
BssSI	CACGAG	1 cut(s)	1614
BssT1I	CCWWGG	5 cut(s)	474, 1502, 1552, 1912, 2262
Bst2BI	CACGAG	1 cut(s)	1614
Bst2UI	CCWGG	4 cut(s)	625, 1509, 1533, 1998
Bst4CI	ACNGT	9 cut(s)	148, 434, 673, 819, 1120, 1162, 1724, 1815, 2252
Bst6I	CTCTTC	5 cut(s)	217, 300, 1400, 1413, 1616
BstAPI	GCANNNNNTGC	1 cut(s)	204
BstBAI	YACGTR	1 cut(s)	1810
BstC8I	GCNNGC	7 cut(s)	172, 349, 393, 400, 1207, 1654, 1956
BstDEI	CTNAG	6 cut(s)	101, 456, 639, 649, 1058, 1216
BstDSI	CCRYGG	3 cut(s)	430, 474, 1502
BstH2I	RGCGCY	1 cut(s)	1659
BstHHI	GCGC	2 cut(s)	1342, 1658
BstMAI	GTCTC	7 cut(s)	357, 1219, 1253, 1503, 1617, 1618, 1696
BstMWI	GCNNNNNNNGC	4 cut(s)	204, 392, 476, 1664
BstNI	CCWGG	4 cut(s)	625, 1509, 1533, 1998
BstNSI	RCATGY	5 cut(s)	542, 1209, 2038, 2123, 2306
BstSCI	CCNGG	8 cut(s)	414, 623, 1316, 1317, 1507, 1531, 1627, 1996
BstSFI	CTRYAG	3 cut(s)	381, 910, 1179
BstSLI	GKGCMC	2 cut(s)	1324, 1920
BstSNI	TACGTA	1 cut(s)	1810
BstV1I	GCAGC	6 cut(s)	367, 382, 395, 1216, 2018, 2342
BstV2I	GAAGAC	5 cut(s)	22, 1085, 1936, 2009, 2253
BstX2I	RGATCY	6 cut(s)	120, 200, 634, 1372, 1908, 2045
BstXI	CCANNNNNNTGG	2 cut(s)	125, 631
BstYI	RGATCY	6 cut(s)	120, 200, 634, 1372, 1908, 2045
Bsu15I	ATCGAT	2 cut(s)	777, 1048
BsuRI	GGCC	8 cut(s)	414, 628, 897, 1322, 1507, 1918, 1958, 2020
BsuTUI	ATCGAT	2 cut(s)	777, 1048
BtgI	CCRYGG	3 cut(s)	430, 474, 1502
BtsIMutI	CAGTG	3 cut(s)	153, 815, 1055
Cac8I	GCNNGC	7 cut(s)	172, 349, 393, 400, 1207, 1654, 1956
CaiI	CAGNNNCTG	1 cut(s)	817
CciI	TCATGA	2 cut(s)	1773, 1846
CfoI	GCGC	2 cut(s)	1342, 1658
Cfr10I	RCCGGY	1 cut(s)	451
Cfr13I	GGNCC	7 cut(s)	1285, 1320, 1321, 1780, 1916, 1917, 1957
Cfr9I	CCCGGG	1 cut(s)	1317
ClaI	ATCGAT	2 cut(s)	777, 1048
Csp6I	GTAC	5 cut(s)	447, 664, 1116, 1520, 1811
CviQI	GTAC	5 cut(s)	447, 664, 1116, 1520, 1811
DdeI	CTNAG	6 cut(s)	101, 456, 639, 649, 1058, 1216
DrdI	GACNNNNNNGTC	1 cut(s)	1190
DseDI	GACNNNNNNGTC	1 cut(s)	1190
EaeI	YGGCCR	2 cut(s)	412, 2018
Eam1104I	CTCTTC	5 cut(s)	217, 300, 1400, 1413, 1616
EarI	CTCTTC	5 cut(s)	217, 300, 1400, 1413, 1616
Eco105I	TACGTA	1 cut(s)	1810
Eco130I	CCWWGG	5 cut(s)	474, 1502, 1552, 1912, 2262
Eco24I	GRGCYC	2 cut(s)	1324, 1920
Eco31I	GGTCTC	3 cut(s)	357, 1503, 1618
Eco32I	GATATC	1 cut(s)	1885
Eco47I	GGWCC	2 cut(s)	1285, 1780
Eco57I	CTGAAG	2 cut(s)	465, 710
Eco88I	CYCGRG	2 cut(s)	1317, 1469
EcoO109I	RGGNCCY	4 cut(s)	1285, 1321, 1916, 1957
EcoRI	GAATTC	1 cut(s)	915
EcoRII	CCWGG	4 cut(s)	623, 1507, 1531, 1996
EcoRV	GATATC	1 cut(s)	1885
EcoT14I	CCWWGG	5 cut(s)	474, 1502, 1552, 1912, 2262
EcoT22I	ATGCAT	1 cut(s)	940
EcoT38I	GRGCYC	2 cut(s)	1324, 1920
ErhI	CCWWGG	5 cut(s)	474, 1502, 1552, 1912, 2262
FalI	AAGNNNNNCTT	2 cut(s)	632, 664
FaqI	GGGAC	2 cut(s)	228, 1271
FauNDI	CATATG	1 cut(s)	940
FbaI	TGATCA	3 cut(s)	867, 1636, 1726
FblI	GTMKAC	2 cut(s)	1182, 1194
Fnu4HI	GCNGC	6 cut(s)	381, 384, 396, 1230, 2032, 2356
FriOI	GRGCYC	2 cut(s)	1324, 1920
Fsp4HI	GCNGC	6 cut(s)	381, 384, 396, 1230, 2032, 2356
FspBI	CTAG	2 cut(s)	78, 2126
FspI	TGCGCA	1 cut(s)	1341
GlaI	GCGC	2 cut(s)	1341, 1657
GluI	GCNGC	6 cut(s)	381, 384, 396, 1230, 2032, 2356
HaeII	RGCGCY	1 cut(s)	1659
HaeIII	GGCC	8 cut(s)	414, 628, 897, 1322, 1507, 1918, 1958, 2020
HapII	CCGG	4 cut(s)	415, 452, 1318, 1628
HhaI	GCGC	2 cut(s)	1342, 1658
Hin6I	GCGC	2 cut(s)	1340, 1656
HinP1I	GCGC	2 cut(s)	1340, 1656
HincII	GTYRAC	5 cut(s)	931, 954, 1195, 1351, 1720
HindII	GTYRAC	5 cut(s)	931, 954, 1195, 1351, 1720
HindIII	AAGCTT	1 cut(s)	722
HinfI	GANTC	3 cut(s)	565, 779, 1540
HpaI	GTTAAC	1 cut(s)	954
HpaII	CCGG	4 cut(s)	415, 452, 1318, 1628
HphI	GGTGA	4 cut(s)	140, 362, 745, 1141
Hpy166II	GTNNAC	8 cut(s)	430, 449, 931, 954, 1183, 1195, 1351, 1720
Hpy8I	GTNNAC	8 cut(s)	430, 449, 931, 954, 1183, 1195, 1351, 1720
Hpy99I	CGWCG	1 cut(s)	1398
HpyCH4III	ACNGT	9 cut(s)	148, 434, 673, 819, 1120, 1162, 1724, 1815, 2252
HpyCH4IV	ACGT	3 cut(s)	577, 1393, 1809
HpyF10VI	GCNNNNNNNGC	4 cut(s)	204, 392, 476, 1664
HpyF3I	CTNAG	6 cut(s)	101, 456, 639, 649, 1058, 1216
HpySE526I	ACGT	3 cut(s)	577, 1393, 1809
HspAI	GCGC	2 cut(s)	1340, 1656
KflI	GGGWCCC	1 cut(s)	1285
Ksp22I	TGATCA	3 cut(s)	867, 1636, 1726
KspAI	GTTAAC	1 cut(s)	954
LmnI	GCTCC	5 cut(s)	157, 685, 1135, 1705, 1981
Lsp1109I	GCAGC	6 cut(s)	367, 382, 395, 1216, 2018, 2342
LweI	GCATC	8 cut(s)	479, 536, 592, 925, 1027, 1963, 2169, 2288
MaeI	CTAG	2 cut(s)	78, 2126
MaeII	ACGT	3 cut(s)	577, 1393, 1809
MaeIII	GTNAC	4 cut(s)	82, 1053, 1590, 1805
MflI	RGATCY	6 cut(s)	120, 200, 634, 1372, 1908, 2045
MhlI	GDGCHC	2 cut(s)	1324, 1920
MlsI	TGGCCA	1 cut(s)	2020
MluCI	AATT	8 cut(s)	140, 375, 915, 1268, 1438, 2011, 2192, 2204
MluNI	TGGCCA	1 cut(s)	2020
MlyI	GAGTC	1 cut(s)	574
MmeI	TCCRAC	3 cut(s)	1400, 1460, 1909
Mox20I	TGGCCA	1 cut(s)	2020
Mph1103I	ATGCAT	1 cut(s)	940
MroXI	GAANNNNTTC	2 cut(s)	723, 2272
MscI	TGGCCA	1 cut(s)	2020
MseI	TTAA	5 cut(s)	93, 273, 405, 953, 2288
Msp20I	TGGCCA	1 cut(s)	2020
MspA1I	CMGCKG	1 cut(s)	386
MspI	CCGG	4 cut(s)	415, 452, 1318, 1628
MspR9I	CCNGG	8 cut(s)	416, 625, 1318, 1319, 1509, 1533, 1629, 1998
Mva1269I	GAATGC	1 cut(s)	1669
MvaI	CCWGG	4 cut(s)	625, 1509, 1533, 1998
MwoI	GCNNNNNNNGC	4 cut(s)	204, 392, 476, 1664
NciI	CCSGG	4 cut(s)	416, 1318, 1319, 1629
NcoI	CCATGG	2 cut(s)	474, 1502
NdeI	CATATG	1 cut(s)	940
NmuCI	GTSAC	1 cut(s)	1053
NsbI	TGCGCA	1 cut(s)	1341
NsiI	ATGCAT	1 cut(s)	940
NspI	RCATGY	5 cut(s)	542, 1209, 2038, 2123, 2306
PaeI	GCATGC	1 cut(s)	1209
PagI	TCATGA	2 cut(s)	1773, 1846
PasI	CCCWGGG	1 cut(s)	1997
PciI	ACATGT	1 cut(s)	2302
PcsI	WCGNNNNNNNCGW	1 cut(s)	574
PctI	GAATGC	1 cut(s)	1669
PdmI	GAANNNNTTC	2 cut(s)	723, 2272
PfeI	GAWTC	2 cut(s)	779, 1540
PflMI	CCANNNNNTGG	2 cut(s)	990, 1508
PfoI	TCCNGGA	1 cut(s)	1531
PkrI	GCNGC	6 cut(s)	382, 385, 397, 1231, 2033, 2357
PleI	GAGTC	1 cut(s)	573
PpsI	GAGTC	1 cut(s)	573
Ppu21I	YACGTR	1 cut(s)	1810
PpuMI	RGGWCCY	1 cut(s)	1285
PscI	ACATGT	1 cut(s)	2302
Psp5II	RGGWCCY	1 cut(s)	1285
Psp6I	CCWGG	4 cut(s)	623, 1507, 1531, 1996
PspGI	CCWGG	4 cut(s)	623, 1507, 1531, 1996
PspOMI	GGGCCC	2 cut(s)	1320, 1916
PspPI	GGNCC	7 cut(s)	1285, 1320, 1321, 1780, 1916, 1917, 1957
PspPPI	RGGWCCY	1 cut(s)	1285
PstI	CTGCAG	1 cut(s)	385
PstNI	CAGNNNCTG	1 cut(s)	817
PsuI	RGATCY	6 cut(s)	120, 200, 634, 1372, 1908, 2045
RsaI	GTAC	5 cut(s)	448, 665, 1117, 1521, 1812
RsaNI	GTAC	5 cut(s)	447, 664, 1116, 1520, 1811
SalI	GTCGAC	1 cut(s)	1193
SaqAI	TTAA	5 cut(s)	93, 273, 405, 953, 2288
SatI	GCNGC	6 cut(s)	381, 384, 396, 1230, 2032, 2356
Sau96I	GGNCC	7 cut(s)	1285, 1320, 1321, 1780, 1916, 1917, 1957
SchI	GAGTC	1 cut(s)	574
ScrFI	CCNGG	8 cut(s)	416, 625, 1318, 1319, 1509, 1533, 1629, 1998
SduI	GDGCHC	2 cut(s)	1324, 1920
SfaNI	GCATC	8 cut(s)	479, 536, 592, 925, 1027, 1963, 2169, 2288
SfcI	CTRYAG	3 cut(s)	381, 910, 1179
SinI	GGWCC	2 cut(s)	1285, 1780
SmaI	CCCGGG	1 cut(s)	1319
SnaBI	TACGTA	1 cut(s)	1810
SphI	GCATGC	1 cut(s)	1209
Sse9I	AATT	8 cut(s)	140, 375, 915, 1268, 1438, 2011, 2192, 2204
SsiI	CCGC	3 cut(s)	386, 887, 1152
SspI	AATATT	2 cut(s)	409, 2134
SspMI	CTAG	2 cut(s)	78, 2126
StyD4I	CCNGG	8 cut(s)	414, 623, 1316, 1317, 1507, 1531, 1627, 1996
StyI	CCWWGG	5 cut(s)	474, 1502, 1552, 1912, 2262
TaaI	ACNGT	9 cut(s)	148, 434, 673, 819, 1120, 1162, 1724, 1815, 2252
TaiI	ACGT	3 cut(s)	580, 1396, 1812
TaqI	TCGA	6 cut(s)	777, 821, 1048, 1194, 1396, 1756
TasI	AATT	8 cut(s)	140, 375, 915, 1268, 1438, 2011, 2192, 2204
TatI	WGTACW	1 cut(s)	446
TfiI	GAWTC	2 cut(s)	779, 1540
Tru1I	TTAA	5 cut(s)	93, 273, 405, 953, 2288
Tru9I	TTAA	5 cut(s)	93, 273, 405, 953, 2288
TscAI	CASTG	3 cut(s)	153, 822, 1062
TseFI	GTSAC	1 cut(s)	1053
TseI	GCWGC	6 cut(s)	380, 383, 395, 1229, 2031, 2355
Tsp45I	GTSAC	1 cut(s)	1053
TspGWI	ACGGA	3 cut(s)	681, 869, 2348
TspMI	CCCGGG	1 cut(s)	1317
TspRI	CASTG	3 cut(s)	153, 822, 1062
Van91I	CCANNNNNTGG	2 cut(s)	990, 1508
VpaK11BI	GGWCC	2 cut(s)	1285, 1780
XapI	RAATTY	6 cut(s)	140, 915, 1268, 1438, 2192, 2204
XbaI	TCTAGA	1 cut(s)	77
XceI	RCATGY	5 cut(s)	542, 1209, 2038, 2123, 2306
XcmI	CCANNNNNNNNNTGG	1 cut(s)	16
XmaI	CCCGGG	1 cut(s)	1317
XmiI	GTMKAC	2 cut(s)	1182, 1194
XmnI	GAANNNNTTC	2 cut(s)	723, 2272
XspI	CTAG	2 cut(s)	78, 2126
Zsp2I	ATGCAT	1 cut(s)	940

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.