Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2B

Orthogroup ID

OG0000892

Physical Location & Seq

Genomic Coordinates Forward (+)

33107274 .. 33115588

Gene Structure 8315 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2BG293400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2367 bp

ATGGACACAAGAGGGAGACTTGTTGCTGGTTCTCACAACAGGAATGAGTTTATTCTCATCAATGCAGATGAGGCTTCAAGGATACAGTCTGTGGAAGAACTGAGTGGACAAATATGTCAGATTTGTGGTGATGGGATTGAGATTACAGATGATGGAGAGATCTTTGTAGCCTGCAATGAATGTGCCTTCCCTGTATGTAGAGCTTGTTATCAGTATGAAAGAAAAGAGGGAAATCAGGCTTGTCCCCAGTGTAAAACCAGATACAAGCGCATCAAAGGTACTCCTAGGGTTGAAGGTGATGAAGAGGAAGATGATATCGATGATTTGTACAATGAGTTTTGTTACGGGAATCTTGATGCTTTGGGCTCACATCAAGTTGCTGAGGCTGTGCTGTCTTCACACCTTAATGTTGGTCGCGGTTCCCACTATAATGCCAGAATTCCCACACACACAGAACATGATTCCTCAACTCTGGGTTCTGAAATCCCACTCTTGACCTATGGCGAGGAGGATTCTGAGATATCTTCTGATCGACATGCGCTTATTGTACCTCCATATATGGGTCATGGGAACAGAGTCCATCCTGTGCCTTTTCCTGATTCATCTCCTTTGCAACCTAGACCAATGGTTCCTAAGAAAGACATTTCAGTATATGGGTATGGGAGTGTGGCTTGGAAAGATCGAATGGAAGAGTGGAAGAAAAAGCAAAATGACAAACTTCAGGTGGTAAAGCATGAAGGAGATAATGGTGGTGGAAACTTTGGTGGAAAGGAAGATGATGTTGATTTGCCCATGATGGATGAAGGCAGGCAGCCACTTTCAAGAAAGATACCCATCCCTTCAAGCAAGATAAACCCATACAGAATGATAATAATACTCCGACTTGTAATCCTTGGCTTCTTTTTCCATTATAGAATTCTCAATCCAGTGAAAGATGCATATGGCTTGTGGTTGACGTCAGTCATATGCGAGATATGGTTTGCTGTTTCATGGATTCTGGATCAGTTCCCCAAATGGTATCCAATAGAACGAGAAACGTACCTAGATCGCCTATCACTGAGGTATGAAAAGGAAGGGAAACCATCTGAACTAGCGAGTATAGACATCTTTGTTAGTACAGTCGACCCTACGAAAGAACCTCCACTAATCACTGCAAACACGGTCCTTTCCATCCTTGCTGTCGATTATCCAGTTGATAAAGTTGCATGTTATGTCTCGGATGATGGTGCTGCCATGCTTACTTTTGAAGCCCTTTCTGAGACAGCTGAGTTTTCCAGGAGATGGGTCCCTTTTTGTAAGAAATATAGCATTGAGCCTCGAGCCCCAGAATGGTACTTCTGTCAGAAGATTGACTATTTGAAAAATAAGGTTCATCCTGAATTTGTTAGGGAAAGGCGTGCAATGAAGAGAGACTATGAAGAATTTAAAGTTAGGATTAATAGTTTGGTTGCCATGGCACAAAAGGTTCCGGAGGATGGTTGGACAATGCAGGATGGTACTCCCTGGCCTGGGAACAATGTACGAGACCATCCTGGCATGATTCAGGTCTTTCTGGGAAACAATGGTTTTCGTGATGATGAAGGAAATGAGTTACCTCGTCTGATTTATGTTTCTCGTGAAAAGAGACCAGGATTTGATCACCATAAAAAGGCGGGTGCCATGAATGCTCTTATGCGGGTCTCTGCCGTCATCTCTAATGCTCCTTATCTTCTGAATGTTGACTGTGATCACTACATCAACAATAGCAAGGCCCTCAGAGAAGCCATGTGCTTCATGATGGACCCTACAGCAGGGAAGAAAGTTTGCTATGTGCAGTTTCCCCAAAGATTTGATGGGATTGATCGTCACGATAGATACTCGAATCGGAATGTTGTATTCTTTGATATCAACATGAAAGGATTAGATGGTATACAAGGGCCAATATATGTTGGAACTGGGTGTGTTTTCAGAAGGCAAGCTCTGTATGGGTTTGATGCACCTGCCTCAAAGAAACCCCCTAGCAGAACCTGCAATTGCTGGCCAAAATGGTGCTGCCTGTGTTGTGGGTCAAGAAAAAACAAGAACGCAAAGTCAAAGAAAGAGAAAAAGAAGAAATCGAAACAGAGAGAAGCATCAAAGCAGATACATGCTGTTGAAAATATTGAAGAGGGAATTGAAGAATCAATCTCTGATAAATCATCCCATATGTCCCAACTGAAATTGGAGAAGAAATTTGGGCAATCTCCTGTCTTCGTAGCCTCTGCAGTACTGGAGGATGGTGGAATTCCACAGGACGTCAGTCCTGCATCTCTCTTGAGAGAAGCCATCCAAGTCATAAGCTGTGGTTATGAAGATAAAACAGAATGGGGAAAGGAAGTAAGTGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000226 GO:0000271 GO:0000278 GO:0000281 GO:0000910 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005886 GO:0005887 GO:0005975 GO:0005976 GO:0006073 GO:0006996 GO:0007010 GO:0007017 GO:0007049 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009791 GO:0009825 GO:0009832 GO:0009833 GO:0009987 GO:0010154 GO:0010191 GO:0010192 GO:0010214 GO:0010330 GO:0012505 GO:0016020 GO:0016021 GO:0016043 GO:0016049 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0016759 GO:0022402 GO:0022414 GO:0030243 GO:0030244 GO:0030865 GO:0031122 GO:0031224 GO:0031226 GO:0032501 GO:0032502 GO:0032991 GO:0033692 GO:0034637 GO:0034645 GO:0040007 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043622 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0046527 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0051273 GO:0051274 GO:0051301 GO:0061458 GO:0061640 GO:0071554 GO:0071669 GO:0071704 GO:0071840 GO:0071944 GO:0097435 GO:1901576 GO:1902494 GO:1903047 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulose_synt zf-UDP

Protein Analysis

788

Amino Acids

89.47

Weight (kDa)

6.16

Isoelectric Point (pI)

44.99

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-UDP	PF14569	30 - 105	2.7e-40	Zinc-binding RING-finger
Cellulose_synt	PF03552	367 - 786	5.3e-226	Cellulose synthase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0000892)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G21770 AT4G39350 AT5G09870 AT5G64740
fragaria_vesca	FvH4_1g23890 FvH4_1g23890 FvH4_1g23890 FvH4_1g23890 FvH4_1g23890 FvH4_2g13380 FvH4_2g13380 FvH4_2g13380 FvH4_2g13380 FvH4_2g13380 FvH4_5g26830 FvH4_5g26830 FvH4_5g26830
malus_domestica	MD00G1146900.v1.1 MD05G1029400.v1.1 MD10G1029800.v1.1 MD15G1340200.v1.1
prunus_persica	Prupe.5G000300_v2.0.a1 Prupe.5G000300_v2.0.a1 Prupe.5G000300_v2.0.a1 Prupe.6G161300_v2.0.a1 Prupe.6G161300_v2.0.a1 Prupe.8G035100_v2.0.a1
pyrus_communis	pycom01g03410 pycom01g03420 pycom01g03470 pycom05g02060 pycom05g02070 pycom15g29990
rosa_chinensis	RchiOBHm_Chr2g0119881 RchiOBHm_Chr6g0274931 RchiOBHm_Chr7g0217741
rosa_laevigata	RLG00000002442 RLG00000013507 RLG00000018496
rosa_multiflora	Rmu_sc0000202.1_g000022 Rmu_sc0001501.1_g000028 Rmu_sc0007760.1_g000002
rosa_roxburghii	Rroxscaffold_2G00124010 Rroxscaffold_3G00241720 Rroxscaffold_7G00193790
rosa_rugosa	Rorug02G0224300 Rorug02G0224400 Rorug02G0224500 Rorug06G0086400 Rorug06G0086500 Rorug07G0170900.1
rosa_samantha	Rh2AG282100 Rh2BG293400 Rh2DG288300 Rh2DG307400 Rh6AG201300 Rh6BG204900 Rh6CG206300 Rh6DG196400 Rh7AG311600 Rh7BG303500 Rh7CG330400
rosa_wichuraiana	Rw2G022520 Rw6G017510 Rw7G026440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1987
AasI	GACNNNNNNGTC	1 cut(s)	114
AatII	GACGTC	2 cut(s)	959, 2277
Acc36I	ACCTGC	2 cut(s)	1987, 2015
AccB1I	GGYRCC	1 cut(s)	1655
AccB7I	CCANNNNNTGG	1 cut(s)	1281
AccI	GTMKAC	2 cut(s)	1122, 1909
AccII	CGCG	1 cut(s)	417
AccIII	TCCGGA	1 cut(s)	1468
AciI	CCGC	3 cut(s)	417, 1652, 1675
AclWI	GGATC	1 cut(s)	1008
AcoI	YGGCCR	1 cut(s)	2018
AcsI	RAATTY	6 cut(s)	438, 915, 1379, 1421, 2210, 2262
AcuI	CTGAAG	1 cut(s)	704
AcyI	GRCGYC	2 cut(s)	956, 2274
AfaI	GTAC	9 cut(s)	280, 329, 549, 1040, 1117, 1334, 1498, 1521, 2247
AfiI	CCNNNNNNNGG	8 cut(s)	560, 1281, 1329, 1475, 1508, 1509, 1648, 1790
AgsI	TTSAA	9 cut(s)	78, 293, 822, 843, 1247, 1360, 2135, 2144, 2156
AjnI	CCWGG	5 cut(s)	1274, 1502, 1507, 1531, 1627
AluBI	AGCT	4 cut(s)	203, 1265, 1958, 2319
AluI	AGCT	4 cut(s)	203, 1265, 1958, 2319
Alw26I	GTCTC	7 cut(s)	10, 1219, 1253, 1404, 1518, 1618, 1684
AlwI	GGATC	1 cut(s)	1008
AlwNI	CAGNNNCTG	1 cut(s)	2007
Ama87I	CYCGRG	1 cut(s)	1317
Aor13HI	TCCGGA	1 cut(s)	1468
AoxI	GGCC	4 cut(s)	1505, 1749, 1916, 2018
ApeKI	GCWGC	3 cut(s)	811, 1229, 2031
ApoI	RAATTY	6 cut(s)	438, 915, 1379, 1421, 2210, 2262
AseI	ATTAAT	1 cut(s)	1437
AspA2I	CCTAGG	1 cut(s)	284
AspLEI	GCGC	2 cut(s)	270, 541
AspS9I	GGNCC	5 cut(s)	1162, 1285, 1750, 1780, 1916
AsuHPI	GGTGA	3 cut(s)	140, 308, 1631
AvaI	CYCGRG	1 cut(s)	1317
AvaII	GGWCC	3 cut(s)	1162, 1285, 1780
AvrII	CCTAGG	1 cut(s)	284
BaeI	ACNNNNGTAYC	2 cut(s)	1324, 1357
BalI	TGGCCA	1 cut(s)	2020
BanI	GGYRCC	1 cut(s)	1655
BanII	GRGCYC	2 cut(s)	368, 1324
BauI	CACGAG	1 cut(s)	1614
BbsI	GAAGAC	2 cut(s)	387, 2221
BbvCI	CCTCAGC	1 cut(s)	381
BbvI	GCAGC	3 cut(s)	823, 1216, 2018
BceAI	ACGGC	1 cut(s)	1670
BciT130I	CCWGG	5 cut(s)	1276, 1504, 1509, 1533, 1629
BciVI	GTATCC	2 cut(s)	75, 1029
BclI	TGATCA	2 cut(s)	1636, 1726
BcoDI	GTCTC	7 cut(s)	10, 1219, 1253, 1404, 1518, 1618, 1684
BfaI	CTAG	5 cut(s)	285, 618, 1043, 1091, 1998
BfmI	CTRYAG	2 cut(s)	1785, 2241
BfuAI	ACCTGC	2 cut(s)	1987, 2015
BfuI	GTATCC	2 cut(s)	75, 1029
BglII	AGATCT	1 cut(s)	159
BisI	GCNGC	3 cut(s)	812, 1230, 2032
BlnI	CCTAGG	1 cut(s)	284
BlsI	GCNGC	3 cut(s)	813, 1231, 2033
BmcAI	AGTACT	1 cut(s)	2247
Bme1390I	CCNGG	5 cut(s)	1276, 1504, 1509, 1533, 1629
Bme18I	GGWCC	3 cut(s)	1162, 1285, 1780
BmeT110I	CYCGRG	1 cut(s)	1317
BmgT120I	GGNCC	5 cut(s)	1162, 1285, 1750, 1780, 1916
BmiI	GGNNCC	7 cut(s)	421, 630, 1286, 1287, 1467, 1657, 1782
BmrFI	CCNGG	5 cut(s)	1276, 1504, 1509, 1533, 1629
BmrI	ACTGGG	2 cut(s)	241, 1944
BmsI	GCATC	6 cut(s)	279, 346, 925, 1963, 2120, 2294
BmuI	ACTGGG	2 cut(s)	241, 1944
BoxI	GACNNNNGTC	2 cut(s)	959, 2277
BpiI	GAAGAC	2 cut(s)	387, 2221
BpmI	CTGGAG	1 cut(s)	2270
Bpu10I	CCTNAGC	1 cut(s)	381
BpuEI	CTTGAG	1 cut(s)	2314
Bsa29I	ATCGAT	1 cut(s)	318
BsaBI	GATNNNNATC	1 cut(s)	833
BsaHI	GRCGYC	2 cut(s)	956, 2274
BsaI	GGTCTC	3 cut(s)	1518, 1618, 1684
BsaJI	CCNNGG	5 cut(s)	284, 892, 1452, 1502, 1508
BsaWI	WCCGGW	1 cut(s)	1468
Bsc4I	CCNNNNNNNGG	8 cut(s)	560, 1281, 1329, 1475, 1508, 1509, 1648, 1790
Bse1I	ACTGG	5 cut(s)	247, 926, 1190, 1939, 2253
Bse3DI	GCAATG	2 cut(s)	181, 1407
Bse8I	GATNNNNATC	1 cut(s)	833
BseAI	TCCGGA	1 cut(s)	1468
BseBI	CCWGG	5 cut(s)	1276, 1504, 1509, 1533, 1629
BseCI	ATCGAT	1 cut(s)	318
BseDI	CCNNGG	5 cut(s)	284, 892, 1452, 1502, 1508
BseJI	GATNNNNATC	1 cut(s)	833
BseLI	CCNNNNNNNGG	8 cut(s)	560, 1281, 1329, 1475, 1508, 1509, 1648, 1790
BseMI	GCAATG	2 cut(s)	181, 1407
BseMII	CTCAG	7 cut(s)	92, 372, 507, 1049, 1248, 1257, 1768
BseNI	ACTGG	5 cut(s)	247, 926, 1190, 1939, 2253
BseRI	GAGGAG	1 cut(s)	521
BseXI	GCAGC	3 cut(s)	823, 1216, 2018
BsgI	GTGCAG	1 cut(s)	1832
Bsh1236I	CGCG	1 cut(s)	417
BshFI	GGCC	4 cut(s)	1507, 1751, 1918, 2020
BshNI	GGYRCC	1 cut(s)	1655
BshVI	ATCGAT	1 cut(s)	318
BsiHKCI	CYCGRG	1 cut(s)	1317
BsiSI	CCGG	1 cut(s)	1469
BslFI	GGGAC	3 cut(s)	228, 1271, 2173
BslI	CCNNNNNNNGG	8 cut(s)	560, 1281, 1329, 1475, 1508, 1509, 1648, 1790
BsmAI	GTCTC	7 cut(s)	10, 1219, 1253, 1404, 1518, 1618, 1684
BsmFI	GGGAC	3 cut(s)	228, 1271, 2173
BsmI	GAATGC	1 cut(s)	1669
BsnI	GGCC	4 cut(s)	1507, 1751, 1918, 2020
Bso31I	GGTCTC	3 cut(s)	1518, 1618, 1684
BsoBI	CYCGRG	1 cut(s)	1317
Bsp1286I	GDGCHC	2 cut(s)	368, 1324
Bsp13I	TCCGGA	1 cut(s)	1468
Bsp1407I	TGTACA	1 cut(s)	327
Bsp143I	GATC	8 cut(s)	159, 529, 679, 1000, 1045, 1636, 1726, 1840
Bsp19I	CCATGG	1 cut(s)	1452
BspACI	CCGC	3 cut(s)	417, 1652, 1675
BspANI	GGCC	4 cut(s)	1507, 1751, 1918, 2020
BspCNI	CTCAG	7 cut(s)	93, 373, 508, 1050, 1249, 1258, 1767
BspDI	ATCGAT	1 cut(s)	318
BspEI	TCCGGA	1 cut(s)	1468
BspFNI	CGCG	1 cut(s)	417
BspHI	TCATGA	1 cut(s)	1773
BspLI	GGNNCC	7 cut(s)	421, 630, 1286, 1287, 1467, 1657, 1782
BspMAI	CTGCAG	1 cut(s)	2245
BspMI	ACCTGC	2 cut(s)	1987, 2015
BspPI	GGATC	1 cut(s)	1008
BspT107I	GGYRCC	1 cut(s)	1655
BspTNI	GGTCTC	3 cut(s)	1518, 1618, 1684
BsrDI	GCAATG	2 cut(s)	181, 1407
BsrGI	TGTACA	1 cut(s)	327
BsrI	ACTGG	5 cut(s)	247, 926, 1190, 1939, 2253
BssECI	CCNNGG	5 cut(s)	284, 892, 1452, 1502, 1508
BssMI	GATC	8 cut(s)	159, 529, 679, 1000, 1045, 1636, 1726, 1840
BssNAI	GTATAC	1 cut(s)	1910
BssNI	GRCGYC	2 cut(s)	956, 2274
BssSI	CACGAG	1 cut(s)	1614
BssT1I	CCWWGG	3 cut(s)	284, 892, 1452
Bst1107I	GTATAC	1 cut(s)	1910
Bst2BI	CACGAG	1 cut(s)	1614
Bst2UI	CCWGG	5 cut(s)	1276, 1504, 1509, 1533, 1629
Bst4CI	ACNGT	4 cut(s)	87, 1120, 1162, 1724
Bst6I	CTCTTC	4 cut(s)	297, 684, 1400, 2139
BstACI	GRCGYC	2 cut(s)	956, 2274
BstAPI	GCANNNNNTGC	1 cut(s)	2007
BstAUI	TGTACA	1 cut(s)	327
BstC8I	GCNNGC	5 cut(s)	172, 809, 1398, 1956, 2018
BstDEI	CTNAG	8 cut(s)	101, 381, 516, 633, 1058, 1257, 1266, 1754
BstDSI	CCRYGG	1 cut(s)	1452
BstENI	CCTNNNNNAGG	1 cut(s)	1788
BstFNI	CGCG	1 cut(s)	417
BstHHI	GCGC	2 cut(s)	270, 541
BstKTI	GATC	8 cut(s)	162, 532, 682, 1003, 1048, 1639, 1729, 1843
BstMAI	GTCTC	7 cut(s)	10, 1219, 1253, 1404, 1518, 1618, 1684
BstMBI	GATC	8 cut(s)	159, 529, 679, 1000, 1045, 1636, 1726, 1840
BstMWI	GCNNNNNNNGC	3 cut(s)	71, 1664, 2007
BstNI	CCWGG	5 cut(s)	1276, 1504, 1509, 1533, 1629
BstNSI	RCATGY	3 cut(s)	539, 1209, 2129
BstPAI	GACNNNNGTC	2 cut(s)	959, 2277
BstSCI	CCNGG	5 cut(s)	1274, 1502, 1507, 1531, 1627
BstSFI	CTRYAG	2 cut(s)	1785, 2241
BstUI	CGCG	1 cut(s)	417
BstV1I	GCAGC	3 cut(s)	823, 1216, 2018
BstV2I	GAAGAC	2 cut(s)	387, 2221
BstX2I	RGATCY	1 cut(s)	159
BstYI	RGATCY	1 cut(s)	159
BstZ17I	GTATAC	1 cut(s)	1910
Bsu15I	ATCGAT	1 cut(s)	318
BsuI	GTATCC	2 cut(s)	75, 1029
BsuRI	GGCC	4 cut(s)	1507, 1751, 1918, 2020
BsuTUI	ATCGAT	1 cut(s)	318
BtgI	CCRYGG	1 cut(s)	1452
BtsI	GCAGTG	1 cut(s)	1149
BtsIMutI	CAGTG	4 cut(s)	254, 933, 1055, 1149
BveI	ACCTGC	2 cut(s)	1987, 2015
Cac8I	GCNNGC	5 cut(s)	172, 809, 1398, 1956, 2018
CaiI	CAGNNNCTG	1 cut(s)	2007
CciI	TCATGA	1 cut(s)	1773
CfoI	GCGC	2 cut(s)	270, 541
Cfr13I	GGNCC	5 cut(s)	1162, 1285, 1750, 1780, 1916
ClaI	ATCGAT	1 cut(s)	318
Csp6I	GTAC	9 cut(s)	279, 328, 548, 1039, 1116, 1333, 1497, 1520, 2246
CviQI	GTAC	9 cut(s)	279, 328, 548, 1039, 1116, 1333, 1497, 1520, 2246
DdeI	CTNAG	8 cut(s)	101, 381, 516, 633, 1058, 1257, 1266, 1754
DpnI	GATC	8 cut(s)	161, 531, 681, 1002, 1047, 1638, 1728, 1842
DpnII	GATC	8 cut(s)	159, 529, 679, 1000, 1045, 1636, 1726, 1840
DraI	TTTAAA	1 cut(s)	1426
DrdI	GACNNNNNNGTC	1 cut(s)	114
DseDI	GACNNNNNNGTC	1 cut(s)	114
EaeI	YGGCCR	1 cut(s)	2018
Eam1104I	CTCTTC	4 cut(s)	297, 684, 1400, 2139
EarI	CTCTTC	4 cut(s)	297, 684, 1400, 2139
Eco130I	CCWWGG	3 cut(s)	284, 892, 1452
Eco24I	GRGCYC	2 cut(s)	368, 1324
Eco31I	GGTCTC	3 cut(s)	1518, 1618, 1684
Eco32I	GATATC	3 cut(s)	316, 522, 1885
Eco47I	GGWCC	3 cut(s)	1162, 1285, 1780
Eco57I	CTGAAG	1 cut(s)	704
Eco88I	CYCGRG	1 cut(s)	1317
EcoNI	CCTNNNNNAGG	1 cut(s)	1788
EcoO109I	RGGNCCY	2 cut(s)	1285, 1750
EcoRI	GAATTC	3 cut(s)	438, 915, 2262
EcoRII	CCWGG	5 cut(s)	1274, 1502, 1507, 1531, 1627
EcoRV	GATATC	3 cut(s)	316, 522, 1885
EcoT14I	CCWWGG	3 cut(s)	284, 892, 1452
EcoT22I	ATGCAT	1 cut(s)	940
EcoT38I	GRGCYC	2 cut(s)	368, 1324
ErhI	CCWWGG	3 cut(s)	284, 892, 1452
FaqI	GGGAC	3 cut(s)	228, 1271, 2173
FauI	CCCGC	2 cut(s)	1645, 1668
FauNDI	CATATG	3 cut(s)	940, 965, 2184
FbaI	TGATCA	2 cut(s)	1636, 1726
FblI	GTMKAC	2 cut(s)	1122, 1909
Fnu4HI	GCNGC	3 cut(s)	812, 1230, 2032
FriOI	GRGCYC	2 cut(s)	368, 1324
Fsp4HI	GCNGC	3 cut(s)	812, 1230, 2032
FspBI	CTAG	5 cut(s)	285, 618, 1043, 1091, 1998
GlaI	GCGC	2 cut(s)	269, 540
GluI	GCNGC	3 cut(s)	812, 1230, 2032
GsuI	CTGGAG	1 cut(s)	2270
HaeIII	GGCC	4 cut(s)	1507, 1751, 1918, 2020
HapII	CCGG	1 cut(s)	1469
HhaI	GCGC	2 cut(s)	270, 541
Hin1I	GRCGYC	2 cut(s)	956, 2274
Hin6I	GCGC	2 cut(s)	268, 539
HinP1I	GCGC	2 cut(s)	268, 539
HincII	GTYRAC	3 cut(s)	954, 1123, 1720
HindII	GTYRAC	3 cut(s)	954, 1123, 1720
HinfI	GANTC	9 cut(s)	349, 461, 512, 576, 599, 994, 1540, 1861, 2159
HpaII	CCGG	1 cut(s)	1469
HphI	GGTGA	3 cut(s)	140, 308, 1631
Hpy166II	GTNNAC	5 cut(s)	107, 954, 1123, 1720, 1910
Hpy8I	GTNNAC	5 cut(s)	107, 954, 1123, 1720, 1910
HpyAV	CCTTC	8 cut(s)	196, 287, 731, 797, 849, 1067, 1574, 1944
HpyCH4III	ACNGT	4 cut(s)	87, 1120, 1162, 1724
HpyCH4IV	ACGT	3 cut(s)	956, 1037, 2274
HpyF10VI	GCNNNNNNNGC	3 cut(s)	71, 1664, 2007
HpyF3I	CTNAG	8 cut(s)	101, 381, 516, 633, 1058, 1257, 1266, 1754
HpySE526I	ACGT	3 cut(s)	956, 1037, 2274
Hsp92I	GRCGYC	2 cut(s)	956, 2274
HspAI	GCGC	2 cut(s)	268, 539
KflI	GGGWCCC	1 cut(s)	1285
Kpn2I	TCCGGA	1 cut(s)	1468
Ksp22I	TGATCA	2 cut(s)	1636, 1726
Kzo9I	GATC	8 cut(s)	159, 529, 679, 1000, 1045, 1636, 1726, 1840
LmnI	GCTCC	1 cut(s)	1705
Lsp1109I	GCAGC	3 cut(s)	823, 1216, 2018
LweI	GCATC	6 cut(s)	279, 346, 925, 1963, 2120, 2294
MaeI	CTAG	5 cut(s)	285, 618, 1043, 1091, 1998
MaeII	ACGT	3 cut(s)	956, 1037, 2274
MaeIII	GTNAC	3 cut(s)	341, 1590, 1844
MalI	GATC	8 cut(s)	161, 531, 681, 1002, 1047, 1638, 1728, 1842
MboI	GATC	8 cut(s)	159, 529, 679, 1000, 1045, 1636, 1726, 1840
MfeI	CAATTG	1 cut(s)	2011
MflI	RGATCY	1 cut(s)	159
MhlI	GDGCHC	2 cut(s)	368, 1324
MlsI	TGGCCA	1 cut(s)	2020
MluCI	AATT	9 cut(s)	438, 915, 1379, 1421, 2011, 2151, 2198, 2210, 2262
MluNI	TGGCCA	1 cut(s)	2020
MlyI	GAGTC	1 cut(s)	585
MmeI	TCCRAC	3 cut(s)	904, 1460, 1909
Mox20I	TGGCCA	1 cut(s)	2020
Mph1103I	ATGCAT	1 cut(s)	940
MroI	TCCGGA	1 cut(s)	1468
MscI	TGGCCA	1 cut(s)	2020
MseI	TTAA	3 cut(s)	405, 1425, 1437
MslI	CAYNNNNRTG	2 cut(s)	405, 429
Msp20I	TGGCCA	1 cut(s)	2020
MspA1I	CMGCKG	1 cut(s)	1265
MspI	CCGG	1 cut(s)	1469
MspR9I	CCNGG	5 cut(s)	1276, 1504, 1509, 1533, 1629
MunI	CAATTG	1 cut(s)	2011
Mva1269I	GAATGC	1 cut(s)	1669
MvaI	CCWGG	5 cut(s)	1276, 1504, 1509, 1533, 1629
MvnI	CGCG	1 cut(s)	417
MwoI	GCNNNNNNNGC	3 cut(s)	71, 1664, 2007
NcoI	CCATGG	1 cut(s)	1452
NdeI	CATATG	3 cut(s)	940, 965, 2184
NdeII	GATC	8 cut(s)	159, 529, 679, 1000, 1045, 1636, 1726, 1840
NlaIV	GGNNCC	7 cut(s)	421, 630, 1286, 1287, 1467, 1657, 1782
NmuCI	GTSAC	1 cut(s)	1844
NsiI	ATGCAT	1 cut(s)	940
NspI	RCATGY	3 cut(s)	539, 1209, 2129
PaeR7I	CTCGAG	1 cut(s)	1317
PagI	TCATGA	1 cut(s)	1773
PaqCI	CACCTGC	1 cut(s)	1987
PctI	GAATGC	1 cut(s)	1669
PfeI	GAWTC	8 cut(s)	349, 461, 512, 599, 994, 1540, 1861, 2159
PflMI	CCANNNNNTGG	1 cut(s)	1281
PfoI	TCCNGGA	1 cut(s)	1274
PkrI	GCNGC	3 cut(s)	813, 1231, 2033
PleI	GAGTC	1 cut(s)	584
PpsI	GAGTC	1 cut(s)	584
PpuMI	RGGWCCY	1 cut(s)	1285
PshAI	GACNNNNGTC	2 cut(s)	959, 2277
PshBI	ATTAAT	1 cut(s)	1437
Psp5II	RGGWCCY	1 cut(s)	1285
Psp6I	CCWGG	5 cut(s)	1274, 1502, 1507, 1531, 1627
PspGI	CCWGG	5 cut(s)	1274, 1502, 1507, 1531, 1627
PspN4I	GGNNCC	7 cut(s)	421, 630, 1286, 1287, 1467, 1657, 1782
PspPI	GGNCC	5 cut(s)	1162, 1285, 1750, 1780, 1916
PspPPI	RGGWCCY	1 cut(s)	1285
PspXI	VCTCGAGB	1 cut(s)	1317
PstI	CTGCAG	1 cut(s)	2245
PstNI	CAGNNNCTG	1 cut(s)	2007
PsuI	RGATCY	1 cut(s)	159
PvuII	CAGCTG	1 cut(s)	1265
RsaI	GTAC	9 cut(s)	280, 329, 549, 1040, 1117, 1334, 1498, 1521, 2247
RsaNI	GTAC	9 cut(s)	279, 328, 548, 1039, 1116, 1333, 1497, 1520, 2246
RseI	CAYNNNNRTG	2 cut(s)	405, 429
SalI	GTCGAC	1 cut(s)	1121
SaqAI	TTAA	3 cut(s)	405, 1425, 1437
SatI	GCNGC	3 cut(s)	812, 1230, 2032
Sau3AI	GATC	8 cut(s)	159, 529, 679, 1000, 1045, 1636, 1726, 1840
Sau96I	GGNCC	5 cut(s)	1162, 1285, 1750, 1780, 1916
ScaI	AGTACT	1 cut(s)	2247
SchI	GAGTC	1 cut(s)	585
ScrFI	CCNGG	5 cut(s)	1276, 1504, 1509, 1533, 1629
SduI	GDGCHC	2 cut(s)	368, 1324
SfaNI	GCATC	6 cut(s)	279, 346, 925, 1963, 2120, 2294
SfcI	CTRYAG	2 cut(s)	1785, 2241
Sfr274I	CTCGAG	1 cut(s)	1317
SinI	GGWCC	3 cut(s)	1162, 1285, 1780
SlaI	CTCGAG	1 cut(s)	1317
SmiMI	CAYNNNNRTG	2 cut(s)	405, 429
SmlI	CTYRAG	2 cut(s)	1317, 2293
SmoI	CTYRAG	2 cut(s)	1317, 2293
Sse9I	AATT	9 cut(s)	438, 915, 1379, 1421, 2011, 2151, 2198, 2210, 2262
SsiI	CCGC	3 cut(s)	417, 1652, 1675
SspI	AATATT	1 cut(s)	2140
SspMI	CTAG	5 cut(s)	285, 618, 1043, 1091, 1998
StyD4I	CCNGG	5 cut(s)	1274, 1502, 1507, 1531, 1627
StyI	CCWWGG	3 cut(s)	284, 892, 1452
TaaI	ACNGT	4 cut(s)	87, 1120, 1162, 1724
TaiI	ACGT	3 cut(s)	959, 1040, 2277
TaqI	TCGA	8 cut(s)	318, 532, 682, 1122, 1182, 1318, 1859, 2096
TasI	AATT	9 cut(s)	438, 915, 1379, 1421, 2011, 2151, 2198, 2210, 2262
TatI	WGTACW	3 cut(s)	327, 1115, 2245
TfiI	GAWTC	8 cut(s)	349, 461, 512, 599, 994, 1540, 1861, 2159
Tru1I	TTAA	3 cut(s)	405, 1425, 1437
Tru9I	TTAA	3 cut(s)	405, 1425, 1437
TscAI	CASTG	4 cut(s)	254, 933, 1062, 1156
TseFI	GTSAC	1 cut(s)	1844
TseI	GCWGC	3 cut(s)	811, 1229, 2031
Tsp45I	GTSAC	1 cut(s)	1844
TspRI	CASTG	4 cut(s)	254, 933, 1062, 1156
Van91I	CCANNNNNTGG	1 cut(s)	1281
VpaK11BI	GGWCC	3 cut(s)	1162, 1285, 1780
VspI	ATTAAT	1 cut(s)	1437
XagI	CCTNNNNNAGG	1 cut(s)	1788
XapI	RAATTY	6 cut(s)	438, 915, 1379, 1421, 2210, 2262
XceI	RCATGY	3 cut(s)	539, 1209, 2129
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1829
XhoI	CTCGAG	1 cut(s)	1317
XmaJI	CCTAGG	1 cut(s)	284
XmiI	GTMKAC	2 cut(s)	1122, 1909
XspI	CTAG	5 cut(s)	285, 618, 1043, 1091, 1998
ZraI	GACGTC	2 cut(s)	957, 2275
ZrmI	AGTACT	1 cut(s)	2247
Zsp2I	ATGCAT	1 cut(s)	940

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.