Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0000892

Physical Location & Seq

Genomic Coordinates Forward (+)

18208194 .. 18214771

Gene Structure 6578 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g26830.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2895 bp

ATGCTCCATGGCCACATGAGCTATGGCCGGGCTTCCTCCGTCTCGTCTGATTTCCATAATGATCTTCATTCTATTCCTCATCTTCCTCTTCTTACTAATGGTCAAATGGTTGATGACATTCCTCCTGAACAACATGCTTTGGTTCCTTCTTTCATGGGAGCCAATTCCGGAGGCAAAAGGATCCACCCTCTTCCCTTCTCAGATCCTGCCTTTCCAGTACAACCCCGATCCATGGATCCTTCCAAAGACCTGGCGGCTTACGGCTATGGCAGTGTTGCTTGGAAGGAAAGGATGGAAAGTTGGAAACAAAAGCAGGAGAAACTACAGATGATGAAACATGAAAATGGTGGCAAAGATTCCGACTATGATGGGAATGGCCCTGATCTACCATTAATGGACGAGGCAAGGCAGCCCTTGTCAAGAAAGTTGCCAATATCATCGAGCCAAATCAACCCCTACCGAATGATCATCATAATTCGACTTGTTGCTCTTGGCTTCTTTTTTCATTATCGGGTCTTGAATCCTGTGAAAGATGCATATCCACTGTGGCTTATCTCAGTTATTTGTGAGATTTGGTTTGGTGTTTCATGGATTCTTGATCAGTTTCCCAAGTGGCTTCCCATTGACAGGGAAACTTATCTCGACAGATTGTCTCTGAGGTATGAGAAGGAGGGCCAGCCTTCACAGCTTTCCCCTGTTGATATATATGTCAGTACAGTGGATCCATTAAAAGAGCCTCCTCTGGTTACTGCAAACACTGTTCTTTCCATTCTTGCAGTGGACTACCCTGTTGACAAGGTCTCATGTTATGTTTCGGATGATGGTGCCGCTATGCTGACGTTTGAGGCATTATCAGAAACCTCTGAATTTGCTAAGAAGTGGGTGCCTTTCTGTAAGAAGTTTAACATAGAACCACGAGCACCTGAATTTTATTTTGCGCAGAAGATAGATTATCTTAGAGACAAGGTGCTCCCTTCATTTGTGAAGGACAGGAGAGCAATGAAGAGAGAATACGAAGAGTTTAAAGTTCGAATTAATGCTTTGGTTGCTAAAGCTACAAAGGTGCCAGAAGAAGGGTGGACGATGCAGGATGGAACTCCGTGGCCTGGAAATAATGTTCGGGATCATCCTGGGATGATTCAGGTTTTTCTTGGCCAAAGTGGAGGGCTTGACACAGATGGGAATGAATTACCGCGCCTGGTATATGTTTCAAGAGAAAAGAGACCTGGGTTTACTCATCACAAAAAGGCTGGAGCTATGAATGCTTTGGTTCGAGTCTCTGCTGTGCTTACAAATGCACCTTACATGTTGAATTTGGATTGTGATCACTACATCAACAATAGTAAGGCTCTTAGAGAGTCTATGTGTTTCATGATGGATCCATTGCTAGGAAAGAGAGTATGCTATGTCCAGTTCCCTCAGAGGTTTGATGGTATTGATAGGAATGATCGATATGCCAACCGAAATACTGTGTTCTTTGACATTAACATGAAAGGTTTGGATGGAATCCAAGGACCTATCTATGTCGGAACTGGATGTGTCTTCAGAAGGCAGGCGCTCTATGGCTTTGATGCTCCAAAAGTAAAGAAGCCACCAACCAGGACATGCAACTGCTTGCCGTCATGGTGCTGTTGCCTTTGTTCAGGAAAAAGGAAGAAGAAGAAGACTAACAAACCTAAAACTGATTTGAAGAAAAGATTTTTCAGAAAGGGAGATACAACCCCTGTGCTTGCTCTGGAGGGAATTGAAGAGGGCATTGAAGGTGTTGAAAAAGAAAATGTGGCTCTAATGCCTGAGCACAAGTTGGAAAAGAAATTTGGGCAGTCTCCTGTGTTTGTTGCGTCCACCTTGCTAGAGGATGGAGGTTCACTCAAAAGCACTAGCCCTGCATCTCTGCTAAAAGAAGCTATCCATGTCATTAGCTGTGGCTATGAAGATAAAACAGAATGGGGAAAAGAGGTTGGCTGGATTTATGGCTCAGTTACAGAGGATATTCTGACAGGCTTTAAGATGCATTGCCATGGGTGGAGATCCATTTATTGTATCCCTGACAGACCTGCATTTAAAGGATCTGCCCCCATTAACCTTTCTGATCGTTTGCACCAAGTCCTTCGATGGGCCCTTGGGTCAATTGAAATATTTTTGAGCAGGCATTGCCCTCTTTGGTATGGGTATGGCGGGGGTCTAAAGTGGCTGGAGCGTTTGTCTTACATAAATGCTACAGTGTACCCATGGACATCGATTCCACTTGTCGCTTATTGTACTCTACCTGCTGTATGTTTGCTAACAGGCAAATTTATCACTCCGGAGCTGACCAACATTGCCAGCTTGTGGTTTCTGTCTCTTTTCATCTGTATTTTCGCAACGGGTATATTGGAAATGAGATGGAGTGGAGTTGGAATTGATGAATGGTGGAGAAATGAGCAGTTTTGGGTCATCGGAGGAGTGTCGGCTCATTTGTTTGCGGTATTTCAAGGGCTTCTAAAAGTTTTAGCTGGTGTTGATACAAACTTTACTGTGACATCAAAGGGAGGAGATGACGCAGAGTTCTCAGAACTTTACGCATTTAAATGGACGACATTGCTCATCCCACCAACAACTCTGCTCATAATAAACATCGTTGGAGTGGTTGCTGGAATCTCAAATGCAATAAATAATGGTTACGAGTCATGGGGGCCTCTGTTCGGTAAGCTCTTCTTTGCCTTCTGGGTGATTGTTCATCTCTATCCTTTCCTCAAGGGTCTGCTTGGTAGGCAGAATAGGACTCCTACCATCATTATTGTGTGGTCAATATTGCTGGCTTCCATCTTCTCCCTCTTATGGGTCCGAATTGATCCTTTCTTGGCCAAGTCGGATGGCCCCGTCCTGGAGGAATGTGGATTGGATTGTAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000278 GO:0000281 GO:0000910 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005886 GO:0005975 GO:0005976 GO:0006073 GO:0007049 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009832 GO:0009833 GO:0009987 GO:0012505 GO:0016020 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0016759 GO:0022402 GO:0030243 GO:0030244 GO:0033692 GO:0034637 GO:0034645 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0046527 GO:0051273 GO:0051274 GO:0051301 GO:0061640 GO:0071554 GO:0071669 GO:0071704 GO:0071840 GO:0071944 GO:1901576 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulose_synt zf-UDP

Protein Analysis

965

Amino Acids

108.83

Weight (kDa)

8.35

Isoelectric Point (pI)

39.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-UDP	PF14569	31 - 104	1.4e-39	Zinc-binding RING-finger
zf-RING_4	PF14570	38 - 88	3.3e-06	RING/Ubox like zinc-binding domain
Cellulose_synt	PF03552	363 - 1086	0.0	Cellulose synthase
Glyco_trans_2_3	PF13632	783 - 887	1.5e-06	Glycosyl transferase family group 2

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000892)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G21770 AT4G39350 AT5G09870 AT5G64740
fragaria_vesca	FvH4_1g23890 FvH4_1g23890 FvH4_1g23890 FvH4_1g23890 FvH4_1g23890 FvH4_2g13380 FvH4_2g13380 FvH4_2g13380 FvH4_2g13380 FvH4_2g13380 FvH4_5g26830 FvH4_5g26830 FvH4_5g26830
malus_domestica	MD00G1146900.v1.1 MD05G1029400.v1.1 MD10G1029800.v1.1 MD15G1340200.v1.1
prunus_persica	Prupe.5G000300_v2.0.a1 Prupe.5G000300_v2.0.a1 Prupe.5G000300_v2.0.a1 Prupe.6G161300_v2.0.a1 Prupe.6G161300_v2.0.a1 Prupe.8G035100_v2.0.a1
pyrus_communis	pycom01g03410 pycom01g03420 pycom01g03470 pycom05g02060 pycom05g02070 pycom15g29990
rosa_chinensis	RchiOBHm_Chr2g0119881 RchiOBHm_Chr6g0274931 RchiOBHm_Chr7g0217741
rosa_laevigata	RLG00000002442 RLG00000013507 RLG00000018496
rosa_multiflora	Rmu_sc0000202.1_g000022 Rmu_sc0001501.1_g000028 Rmu_sc0007760.1_g000002
rosa_roxburghii	Rroxscaffold_2G00124010 Rroxscaffold_3G00241720 Rroxscaffold_7G00193790
rosa_rugosa	Rorug02G0224300 Rorug02G0224400 Rorug02G0224500 Rorug06G0086400 Rorug06G0086500 Rorug07G0170900.1
rosa_samantha	Rh2AG282100 Rh2BG293400 Rh2DG288300 Rh2DG307400 Rh6AG201300 Rh6BG204900 Rh6CG206300 Rh6DG196400 Rh7AG311600 Rh7BG303500 Rh7CG330400
rosa_wichuraiana	Rw2G022520 Rw6G017510 Rw7G026440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	939
Acc36I	ACCTGC	2 cut(s)	2065, 2278
AccB1I	GGYRCC	3 cut(s)	824, 883, 1063
AccB7I	CCANNNNNTGG	1 cut(s)	2331
AccII	CGCG	1 cut(s)	1195
AccIII	TCCGGA	2 cut(s)	167, 2305
AciI	CCGC	5 cut(s)	254, 828, 1193, 2178, 2465
AcoI	YGGCCR	4 cut(s)	10, 25, 1153, 2844
AcsI	RAATTY	5 cut(s)	866, 926, 1312, 1814, 2294
AcuI	CTGAAG	1 cut(s)	1528
AfaI	GTAC	4 cut(s)	219, 715, 2228, 2263
AflIII	ACRYGT	1 cut(s)	1305
AgsI	TTSAA	9 cut(s)	520, 1212, 1312, 1690, 1748, 1760, 1769, 2135, 2474
AhdI	GACNNNNNGTC	1 cut(s)	649
AjnI	CCWGG	7 cut(s)	249, 1105, 1129, 1197, 1225, 1598, 2865
AjuI	GAANNNNNNNTTGG	2 cut(s)	1800, 1832
AloI	GAACNNNNNNTCC	2 cut(s)	1101, 1133
Alw21I	GWGCWC	3 cut(s)	922, 972, 1800
Alw26I	GTCTC	8 cut(s)	46, 657, 805, 954, 1216, 1282, 1830, 2346
AlwNI	CAGNNNCTG	1 cut(s)	206
Aor13HI	TCCGGA	2 cut(s)	167, 2305
ApaI	GGGCCC	1 cut(s)	2122
ApeKI	GCWGC	1 cut(s)	409
ApoI	RAATTY	5 cut(s)	866, 926, 1312, 1814, 2294
AseI	ATTAAT	2 cut(s)	392, 1035
AspLEI	GCGC	3 cut(s)	940, 1197, 1558
AspS9I	GGNCC	8 cut(s)	377, 673, 1514, 2118, 2119, 2675, 2824, 2858
AsuC2I	CCSGG	1 cut(s)	29
AsuHPI	GGTGA	1 cut(s)	2722
AsuII	TTCGAA	1 cut(s)	1030
AvaII	GGWCC	2 cut(s)	1514, 2824
BaeGI	GKGCMC	1 cut(s)	2122
BalI	TGGCCA	3 cut(s)	12, 1155, 2846
BamHI	GGATCC	4 cut(s)	180, 235, 721, 1378
BanI	GGYRCC	3 cut(s)	824, 883, 1063
BanII	GRGCYC	1 cut(s)	2122
BarI	GAAGNNNNNNTAC	2 cut(s)	995, 1027
BauI	CACGAG	1 cut(s)	915
BbsI	GAAGAC	2 cut(s)	1534, 1670
Bbv12I	GWGCWC	3 cut(s)	922, 972, 1800
BbvI	GCAGC	1 cut(s)	421
BceAI	ACGGC	2 cut(s)	277, 1603
BciT130I	CCWGG	7 cut(s)	251, 1107, 1131, 1199, 1227, 1600, 2867
BciVI	GTATCC	1 cut(s)	2054
BclI	TGATCA	3 cut(s)	465, 598, 1324
BcnI	CCSGG	1 cut(s)	29
BcoDI	GTCTC	8 cut(s)	46, 657, 805, 954, 1216, 1282, 1830, 2346
BfaI	CTAG	3 cut(s)	1388, 1853, 1881
BfmI	CTRYAG	2 cut(s)	323, 2220
BfoI	RGCGCY	1 cut(s)	1559
BfuAI	ACCTGC	2 cut(s)	2065, 2278
BfuI	GTATCC	1 cut(s)	2054
BisI	GCNGC	3 cut(s)	255, 410, 828
BlsI	GCNGC	3 cut(s)	256, 411, 829
Bme1390I	CCNGG	8 cut(s)	29, 251, 1107, 1131, 1199, 1227, 1600, 2867
Bme18I	GGWCC	2 cut(s)	1514, 2824
BmeRI	GACNNNNNGTC	1 cut(s)	649
BmgT120I	GGNCC	8 cut(s)	377, 673, 1514, 2118, 2119, 2675, 2824, 2858
BmrFI	CCNGG	8 cut(s)	29, 251, 1107, 1131, 1199, 1227, 1600, 2867
BmsI	GCATC	5 cut(s)	523, 1074, 1561, 1898, 2001
BpiI	GAAGAC	2 cut(s)	1534, 1670
BplI	GAGNNNNNCTC	2 cut(s)	1854, 1886
BpmI	CTGGAG	4 cut(s)	1272, 1757, 2216, 2888
Bpu10I	CCTNAGC	1 cut(s)	1794
Bpu14I	TTCGAA	1 cut(s)	1030
BpuEI	CTTGAG	1 cut(s)	2720
BpuMI	CCSGG	1 cut(s)	29
Bsa29I	ATCGAT	2 cut(s)	1450, 2240
BsaBI	GATNNNNATC	2 cut(s)	537, 1323
BsaI	GGTCTC	2 cut(s)	805, 1216
BsaJI	CCNNGG	9 cut(s)	7, 231, 1100, 1130, 1226, 1510, 2020, 2122, 2231
BsaWI	WCCGGW	2 cut(s)	167, 2305
BsaXI	ACNNNNNCTCC	2 cut(s)	2189, 2219
Bse1I	ACTGG	3 cut(s)	215, 1411, 1537
Bse3DI	GCAATG	6 cut(s)	1005, 1382, 2014, 2152, 2319, 2579
Bse8I	GATNNNNATC	2 cut(s)	537, 1323
BseAI	TCCGGA	2 cut(s)	167, 2305
BseBI	CCWGG	7 cut(s)	251, 1107, 1131, 1199, 1227, 1600, 2867
BseCI	ATCGAT	2 cut(s)	1450, 2240
BseDI	CCNNGG	9 cut(s)	7, 231, 1100, 1130, 1226, 1510, 2020, 2122, 2231
BseJI	GATNNNNATC	2 cut(s)	537, 1323
BseMI	GCAATG	6 cut(s)	1005, 1382, 2014, 2152, 2319, 2579
BseMII	CTCAG	7 cut(s)	213, 570, 647, 1433, 1785, 1992, 2565
BseNI	ACTGG	3 cut(s)	215, 1411, 1537
BseRI	GAGGAG	3 cut(s)	729, 2457, 2547
BseSI	GKGCMC	1 cut(s)	2122
BseXI	GCAGC	1 cut(s)	421
Bsh1236I	CGCG	1 cut(s)	1195
BshNI	GGYRCC	3 cut(s)	824, 883, 1063
BshVI	ATCGAT	2 cut(s)	1450, 2240
BsiHKAI	GWGCWC	3 cut(s)	922, 972, 1800
BsiSI	CCGG	3 cut(s)	28, 168, 2306
BsmAI	GTCTC	8 cut(s)	46, 657, 805, 954, 1216, 1282, 1830, 2346
BsmBI	CGTCTC	1 cut(s)	46
BsmI	GAATGC	1 cut(s)	1267
Bso31I	GGTCTC	2 cut(s)	805, 1216
Bsp119I	TTCGAA	1 cut(s)	1030
Bsp120I	GGGCCC	1 cut(s)	2118
Bsp1286I	GDGCHC	4 cut(s)	922, 972, 1800, 2122
Bsp13I	TCCGGA	2 cut(s)	167, 2305
Bsp19I	CCATGG	4 cut(s)	7, 231, 2020, 2231
BspACI	CCGC	5 cut(s)	254, 828, 1193, 2178, 2465
BspCNI	CTCAG	7 cut(s)	212, 569, 648, 1432, 1786, 1991, 2564
BspDI	ATCGAT	2 cut(s)	1450, 2240
BspEI	TCCGGA	2 cut(s)	167, 2305
BspFNI	CGCG	1 cut(s)	1195
BspHI	TCATGA	1 cut(s)	1371
BspMI	ACCTGC	2 cut(s)	2065, 2278
BspQI	GCTCTTC	1 cut(s)	2699
BspT104I	TTCGAA	1 cut(s)	1030
BspT107I	GGYRCC	3 cut(s)	824, 883, 1063
BspTNI	GGTCTC	2 cut(s)	805, 1216
BsrDI	GCAATG	6 cut(s)	1005, 1382, 2014, 2152, 2319, 2579
BsrI	ACTGG	3 cut(s)	215, 1411, 1537
BssECI	CCNNGG	9 cut(s)	7, 231, 1100, 1130, 1226, 1510, 2020, 2122, 2231
BssSI	CACGAG	1 cut(s)	915
BssT1I	CCWWGG	6 cut(s)	7, 231, 1510, 2020, 2122, 2231
Bst2BI	CACGAG	1 cut(s)	915
Bst2UI	CCWGG	7 cut(s)	251, 1107, 1131, 1199, 1227, 1600, 2867
Bst4CI	ACNGT	6 cut(s)	546, 718, 760, 1471, 2224, 2518
Bst6I	CTCTTC	6 cut(s)	93, 195, 998, 1011, 1743, 2699
BstAPI	GCANNNNNTGC	1 cut(s)	2154
BstBI	TTCGAA	1 cut(s)	1030
BstC8I	GCNNGC	7 cut(s)	677, 1554, 1616, 1731, 2150, 2326, 2799
BstDSI	CCRYGG	5 cut(s)	7, 231, 1100, 2020, 2231
BstFNI	CGCG	1 cut(s)	1195
BstH2I	RGCGCY	1 cut(s)	1559
BstHHI	GCGC	3 cut(s)	940, 1197, 1558
BstMAI	GTCTC	8 cut(s)	46, 657, 805, 954, 1216, 1282, 1830, 2346
BstMWI	GCNNNNNNNGC	6 cut(s)	18, 685, 1046, 1262, 2154, 2752
BstNI	CCWGG	7 cut(s)	251, 1107, 1131, 1199, 1227, 1600, 2867
BstNSI	RCATGY	3 cut(s)	137, 1309, 1608
BstSCI	CCNGG	8 cut(s)	27, 249, 1105, 1129, 1197, 1225, 1598, 2865
BstSFI	CTRYAG	2 cut(s)	323, 2220
BstSLI	GKGCMC	1 cut(s)	2122
BstUI	CGCG	1 cut(s)	1195
BstV1I	GCAGC	1 cut(s)	421
BstV2I	GAAGAC	2 cut(s)	1534, 1670
BstX2I	RGATCY	7 cut(s)	180, 202, 235, 721, 1378, 2030, 2069
BstXI	CCANNNNNNTGG	1 cut(s)	250
BstYI	RGATCY	7 cut(s)	180, 202, 235, 721, 1378, 2030, 2069
Bsu15I	ATCGAT	2 cut(s)	1450, 2240
BsuI	GTATCC	1 cut(s)	2054
BsuTUI	ATCGAT	2 cut(s)	1450, 2240
BtgI	CCRYGG	5 cut(s)	7, 231, 1100, 2020, 2231
BtsI	GCAGTG	2 cut(s)	277, 783
BtsIMutI	CAGTG	6 cut(s)	277, 542, 723, 756, 783, 2229
BveI	ACCTGC	2 cut(s)	2065, 2278
Cac8I	GCNNGC	7 cut(s)	677, 1554, 1616, 1731, 2150, 2326, 2799
CaiI	CAGNNNCTG	1 cut(s)	206
CciI	TCATGA	1 cut(s)	1371
CfoI	GCGC	3 cut(s)	940, 1197, 1558
Cfr13I	GGNCC	8 cut(s)	377, 673, 1514, 2118, 2119, 2675, 2824, 2858
ClaI	ATCGAT	2 cut(s)	1450, 2240
CseI	GACGC	2 cut(s)	1830, 2549
Csp6I	GTAC	4 cut(s)	218, 714, 2227, 2262
CviQI	GTAC	4 cut(s)	218, 714, 2227, 2262
DraI	TTTAAA	3 cut(s)	1024, 2065, 2569
DriI	GACNNNNNGTC	1 cut(s)	649
EaeI	YGGCCR	4 cut(s)	10, 25, 1153, 2844
Eam1104I	CTCTTC	6 cut(s)	93, 195, 998, 1011, 1743, 2699
Eam1105I	GACNNNNNGTC	1 cut(s)	649
EarI	CTCTTC	6 cut(s)	93, 195, 998, 1011, 1743, 2699
Eco130I	CCWWGG	6 cut(s)	7, 231, 1510, 2020, 2122, 2231
Eco24I	GRGCYC	1 cut(s)	2122
Eco31I	GGTCTC	2 cut(s)	805, 1216
Eco47I	GGWCC	2 cut(s)	1514, 2824
Eco57I	CTGAAG	1 cut(s)	1528
EcoO109I	RGGNCCY	3 cut(s)	1514, 2119, 2675
EcoRII	CCWGG	7 cut(s)	249, 1105, 1129, 1197, 1225, 1598, 2865
EcoT14I	CCWWGG	6 cut(s)	7, 231, 1510, 2020, 2122, 2231
EcoT22I	ATGCAT	2 cut(s)	538, 2016
EcoT38I	GRGCYC	1 cut(s)	2122
ErhI	CCWWGG	6 cut(s)	7, 231, 1510, 2020, 2122, 2231
Esp3I	CGTCTC	1 cut(s)	46
FalI	AAGNNNNNCTT	2 cut(s)	2681, 2713
FauI	CCCGC	1 cut(s)	2171
FbaI	TGATCA	3 cut(s)	465, 598, 1324
Fnu4HI	GCNGC	3 cut(s)	255, 410, 828
FriOI	GRGCYC	1 cut(s)	2122
Fsp4HI	GCNGC	3 cut(s)	255, 410, 828
FspBI	CTAG	3 cut(s)	1388, 1853, 1881
FspI	TGCGCA	1 cut(s)	939
GlaI	GCGC	3 cut(s)	939, 1196, 1557
GluI	GCNGC	3 cut(s)	255, 410, 828
GsuI	CTGGAG	4 cut(s)	1272, 1757, 2216, 2888
HaeII	RGCGCY	1 cut(s)	1559
HapII	CCGG	3 cut(s)	28, 168, 2306
HgaI	GACGC	2 cut(s)	1830, 2549
HhaI	GCGC	3 cut(s)	940, 1197, 1558
Hin6I	GCGC	3 cut(s)	938, 1195, 1556
HinP1I	GCGC	3 cut(s)	938, 1195, 1556
HincII	GTYRAC	1 cut(s)	793
HindII	GTYRAC	1 cut(s)	793
HpaII	CCGG	3 cut(s)	28, 168, 2306
HphI	GGTGA	1 cut(s)	2722
Hpy166II	GTNNAC	7 cut(s)	781, 793, 1080, 1233, 1845, 1868, 2227
Hpy8I	GTNNAC	7 cut(s)	781, 793, 1080, 1233, 1845, 1868, 2227
HpyCH4III	ACNGT	6 cut(s)	546, 718, 760, 1471, 2224, 2518
HpyCH4IV	ACGT	1 cut(s)	839
HpyF10VI	GCNNNNNNNGC	6 cut(s)	18, 685, 1046, 1262, 2154, 2752
HpySE526I	ACGT	1 cut(s)	839
HspAI	GCGC	3 cut(s)	938, 1195, 1556
Kpn2I	TCCGGA	2 cut(s)	167, 2305
Ksp22I	TGATCA	3 cut(s)	465, 598, 1324
LguI	GCTCTTC	1 cut(s)	2699
LmnI	GCTCC	7 cut(s)	9, 158, 975, 1253, 1579, 2197, 2308
Lsp1109I	GCAGC	1 cut(s)	421
LweI	GCATC	5 cut(s)	523, 1074, 1561, 1898, 2001
MaeI	CTAG	3 cut(s)	1388, 1853, 1881
MaeII	ACGT	1 cut(s)	839
MaeIII	GTNAC	4 cut(s)	745, 1981, 2518, 2660
MfeI	CAATTG	1 cut(s)	2130
MflI	RGATCY	7 cut(s)	180, 202, 235, 721, 1378, 2030, 2069
MhlI	GDGCHC	4 cut(s)	922, 972, 1800, 2122
MlsI	TGGCCA	3 cut(s)	12, 1155, 2846
MluNI	TGGCCA	3 cut(s)	12, 1155, 2846
MlyI	GAGTC	4 cut(s)	1284, 1367, 2675, 2758
MmeI	TCCRAC	7 cut(s)	281, 384, 1507, 1785, 2377, 2602, 2832
Mox20I	TGGCCA	3 cut(s)	12, 1155, 2846
Mph1103I	ATGCAT	2 cut(s)	538, 2016
MroI	TCCGGA	2 cut(s)	167, 2305
MscI	TGGCCA	3 cut(s)	12, 1155, 2846
MslI	CAYNNNNRTG	5 cut(s)	342, 1487, 2019, 2569, 2780
Msp20I	TGGCCA	3 cut(s)	12, 1155, 2846
MspI	CCGG	3 cut(s)	28, 168, 2306
MspR9I	CCNGG	8 cut(s)	29, 251, 1107, 1131, 1199, 1227, 1600, 2867
MunI	CAATTG	1 cut(s)	2130
Mva1269I	GAATGC	1 cut(s)	1267
MvaI	CCWGG	7 cut(s)	251, 1107, 1131, 1199, 1227, 1600, 2867
MvnI	CGCG	1 cut(s)	1195
MwoI	GCNNNNNNNGC	6 cut(s)	18, 685, 1046, 1262, 2154, 2752
NciI	CCSGG	1 cut(s)	29
NcoI	CCATGG	4 cut(s)	7, 231, 2020, 2231
NmuCI	GTSAC	1 cut(s)	2518
NsbI	TGCGCA	1 cut(s)	939
NsiI	ATGCAT	2 cut(s)	538, 2016
NspI	RCATGY	3 cut(s)	137, 1309, 1608
NspV	TTCGAA	1 cut(s)	1030
PagI	TCATGA	1 cut(s)	1371
PciI	ACATGT	1 cut(s)	1305
PciSI	GCTCTTC	1 cut(s)	2699
PctI	GAATGC	1 cut(s)	1267
PfeI	GAWTC	7 cut(s)	356, 520, 592, 1138, 1506, 2242, 2637
PflFI	GACNNNGTC	1 cut(s)	797
PflMI	CCANNNNNTGG	1 cut(s)	2331
PfoI	TCCNGGA	1 cut(s)	2865
PkrI	GCNGC	3 cut(s)	256, 411, 829
PleI	GAGTC	4 cut(s)	1283, 1366, 2674, 2758
PpsI	GAGTC	4 cut(s)	1283, 1366, 2674, 2758
PpuMI	RGGWCCY	1 cut(s)	1514
PscI	ACATGT	1 cut(s)	1305
PshBI	ATTAAT	2 cut(s)	392, 1035
Psp5II	RGGWCCY	1 cut(s)	1514
Psp6I	CCWGG	7 cut(s)	249, 1105, 1129, 1197, 1225, 1598, 2865
PspGI	CCWGG	7 cut(s)	249, 1105, 1129, 1197, 1225, 1598, 2865
PspOMI	GGGCCC	1 cut(s)	2118
PspPI	GGNCC	8 cut(s)	377, 673, 1514, 2118, 2119, 2675, 2824, 2858
PspPPI	RGGWCCY	1 cut(s)	1514
PstNI	CAGNNNCTG	1 cut(s)	206
PsuI	RGATCY	7 cut(s)	180, 202, 235, 721, 1378, 2030, 2069
PsyI	GACNNNGTC	1 cut(s)	797
RsaI	GTAC	4 cut(s)	219, 715, 2228, 2263
RsaNI	GTAC	4 cut(s)	218, 714, 2227, 2262
RseI	CAYNNNNRTG	5 cut(s)	342, 1487, 2019, 2569, 2780
SapI	GCTCTTC	1 cut(s)	2699
SatI	GCNGC	3 cut(s)	255, 410, 828
Sau96I	GGNCC	8 cut(s)	377, 673, 1514, 2118, 2119, 2675, 2824, 2858
SchI	GAGTC	4 cut(s)	1284, 1367, 2675, 2758
ScrFI	CCNGG	8 cut(s)	29, 251, 1107, 1131, 1199, 1227, 1600, 2867
SduI	GDGCHC	4 cut(s)	922, 972, 1800, 2122
SfaNI	GCATC	5 cut(s)	523, 1074, 1561, 1898, 2001
SfcI	CTRYAG	2 cut(s)	323, 2220
SfuI	TTCGAA	1 cut(s)	1030
SinI	GGWCC	2 cut(s)	1514, 2824
SmiI	ATTTAAAT	1 cut(s)	2569
SmiMI	CAYNNNNRTG	5 cut(s)	342, 1487, 2019, 2569, 2780
SmlI	CTYRAG	1 cut(s)	2735
SmoI	CTYRAG	1 cut(s)	2735
SsiI	CCGC	5 cut(s)	254, 828, 1193, 2178, 2465
SspI	AATATT	2 cut(s)	2139, 2793
SspMI	CTAG	3 cut(s)	1388, 1853, 1881
StyD4I	CCNGG	8 cut(s)	27, 249, 1105, 1129, 1197, 1225, 1598, 2865
StyI	CCWWGG	6 cut(s)	7, 231, 1510, 2020, 2122, 2231
SwaI	ATTTAAAT	1 cut(s)	2569
TaaI	ACNGT	6 cut(s)	546, 718, 760, 1471, 2224, 2518
TaiI	ACGT	1 cut(s)	842
TaqI	TCGA	8 cut(s)	440, 478, 642, 1030, 1273, 1450, 2113, 2240
TatI	WGTACW	3 cut(s)	217, 713, 2261
TauI	GCSGC	2 cut(s)	257, 830
TfiI	GAWTC	7 cut(s)	356, 520, 592, 1138, 1506, 2242, 2637
TscAI	CASTG	6 cut(s)	277, 549, 723, 763, 783, 2229
TseFI	GTSAC	1 cut(s)	2518
TseI	GCWGC	1 cut(s)	409
Tsp45I	GTSAC	1 cut(s)	2518
TspGWI	ACGGA	2 cut(s)	28, 1089
TspRI	CASTG	6 cut(s)	277, 549, 723, 763, 783, 2229
Tth111I	GACNNNGTC	1 cut(s)	797
Van91I	CCANNNNNTGG	1 cut(s)	2331
VpaK11BI	GGWCC	2 cut(s)	1514, 2824
VspI	ATTAAT	2 cut(s)	392, 1035
XapI	RAATTY	5 cut(s)	866, 926, 1312, 1814, 2294
XceI	RCATGY	3 cut(s)	137, 1309, 1608
XcmI	CCANNNNNNNNNTGG	3 cut(s)	20, 775, 1074
XspI	CTAG	3 cut(s)	1388, 1853, 1881
Zsp2I	ATGCAT	2 cut(s)	538, 2016

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.