Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0002957

Physical Location & Seq

Genomic Coordinates Reverse (-)

10101597 .. 10111223

Gene Structure 9627 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g11560.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1731 bp

ATGGGAAGCACCTTTCTGTCTCTACCAGCGAAGCGTTCAATTTGTTCCACAATGTCCTCCGAAAACGGATCCTCGAAGCGCGCCAGGCCCCGCCAGCAGCAGCAGCAGCTCCCTGTTCCTCCGGGCCACGTGTCCTTCCGCATGCTCTGCCACGCCTCCCGCATCGGCGGCGTCATCGGCAAGTCCGGCGCCGTGATCAAGCAGCTCCAGGTCGCCACCGGCGCTAAGATCCGCATCGAGGAACCTCCCCAAGTGGACTCCCCCGACCGCGTCGTGGTGGTCACCGCTCCCTCGGCCGTCCGGTCCAAAGTGGTGCTGAATGGTCTGGATGAGATTGAGGTCTCCAAGGCCCAAGAGGCGCTTTTGAGAGTGTTCGAGAGGATTCTAGAGGTGGCGGCCGAGAGCGGAGCTATAGGTATAGGGGTTGGAGTGGTTTCTTGCCGCTTTCTGGCGGATGCGGCGCAGGTCGGCTCCGTCATAGGCAAGGGCGGCAAAGTTGTGGAGAAGATTCGGAAAGACACTGGCTGTAAAATTAGGGTCTTGAATGACAAATTGCCCGTTTGTGCTGCTCCTTCCGACCAGATGGTTGAGATTGAAGGCGATATTTTGGCTGTAAAGAAAGCACTTGTTGCTGTCTCTGCTCGCCTTCAAGATTGTCCTCGTGATACTTTACCTGAAATTCGTGTGGTGATTTCTAGTTTGCCAAGCAGCTCTTATGTCTCTGGAGTATCTGTAGAGGCCGAGAGCATCCCCACACTGGATGCCAGAACGCTCCAGCAGGAAGTTACTTTCAGGATTCTTTGTGCCAATGATAGGGCTGGGGGTGTGATTGGAAAGGGAGGTGCCATTGTCAGGGCTCTTCAGAATGAGACTGGTGCTACTATAAGTGTTGGAGGATCTGTGGCCGACTCTGATGAAAGATTAATTACTATTACCGCATCAGAGAATCCTGAGTCCCGCTACTCGCCAGCACAAAAGGCTGTTGTTCTTGTCTTCTCAAGGTCTGTAGAGGCGGGCATTGAAAAGGGGCAAGACTCCAGCTCAAAAGGATCACCTCTTGTCGCACGTCTTGTTGTCCCGACAAGCCAAGTTGGTTGTTTGCTGGGAAAAGGGGGTGTAATAGTTTCAGAGATTCGGAAGGTAACTAGTACTGGTATACGTATAATACGTGGTGACCAGGTCCCAAAGTGTGCTTCAGAGAATGATCAAGTTGTACAGGTTTCAGGAGATTTTTCAAATGTGCAAGATGCTTTATACAATATTACTGGTAGGCTGCGAGATAACCTTTTCTCCAGTGGAGTAAATAATTTGGGGAGGAGGAACAGTTCAGCTGTGCTAACAGATAGCAATCCTTATGGAAGACTCAGGGACCCTGCTCCTATTGTATTTCAGCCAACGTCATCAACTGGTGTTACTCATGGTCTTGGTCGACATACTACTTTATCTCAAAGTATGGATCACCTTGGACTCTCCCATAATTTAGATCATCCATCTTCACCAAAGCCATGGGCATCACATATGGTTGCTCCAAGGGGAATCTCAGATACTAGGGGTTTGACTAATCTTAAAATTGGCTCGGATCTTGGCAGTGGTAGTAAATCTGCTATCGTGACAAATACAACTGTAGAGATCATTGTTCCTGAAAATGTAATCGGCTCAGTGTACGGAGAAAATGGCACCAATTTGGCTCGTCTGAGACAGGTGCTTACCATGGAAGTATGCCCAAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0007275 GO:0008150 GO:0009791 GO:0009908 GO:0009909 GO:0009911 GO:0016604 GO:0016607 GO:0022414 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045595 GO:0045596 GO:0048367 GO:0048437 GO:0048497 GO:0048518 GO:0048519 GO:0048523 GO:0048580 GO:0048582 GO:0048608 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051093 GO:0051094 GO:0051239 GO:0051240 GO:0061458 GO:0065007 GO:0070013 GO:0090567 GO:0090700 GO:0099402 GO:2000026 GO:2000241 GO:2000243

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

KH_1

Protein Analysis

577

Amino Acids

60.69

Weight (kDa)

9.17

Isoelectric Point (pI)

43.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
KH_1	PF00013	46 - 99	1.5e-12	KH domain
KH_1	PF00013	147 - 212	2.1e-13	KH domain
KH_1	PF00013	263 - 315	4.4e-12	KH domain
KH_1	PF00013	355 - 421	7.3e-13	KH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002957)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G64390 AT5G64390 AT5G64390
fragaria_vesca	FvH4_2g11560 FvH4_2g11560 FvH4_2g11560
malus_domestica	MD05G1048400.v1.1 MD10G1054800.v1.1
prunus_persica	Prupe.8G070900_v2.0.a1
pyrus_communis	pycom05g04000 pycom10g04180
rosa_chinensis	RchiOBHm_Chr1g0353311 RchiOBHm_Chr4g0385021 RchiOBHm_Chr6g0270731 RchiOBHm_Chr6g0272811
rosa_laevigata	RLG00000013774
rosa_multiflora	Rmu_co8284529.1_g000001 Rmu_sc0000642.1_g000012 Rmu_sc0041041.1_g000001
rosa_roxburghii	Rroxscaffold_2G00085770 Rroxscaffold_7G00197640
rosa_rugosa	Rorug06G0056000 Rorug06G0056100 Rorug06G0056200
rosa_samantha	Rh2DG204000 Rh4CG002400 Rh4CG168900 Rh6AG157400 Rh6AG175200 Rh6BG140200 Rh6BG178600 Rh6CG174800 Rh6DG123600 Rh6DG167400 Rh6DG180500 Rh7AG209600 Rh7CG359700
rosa_wichuraiana	Rw6G014930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	454
AccB1I	GGYRCC	3 cut(s)	188, 842, 1676
AccBSI	CCGCTC	2 cut(s)	287, 405
AccI	GTMKAC	2 cut(s)	1156, 1429
AccII	CGCG	2 cut(s)	81, 270
AclWI	GGATC	7 cut(s)	63, 76, 223, 904, 1057, 1464, 1587
AcoI	YGGCCR	3 cut(s)	294, 396, 903
AcsI	RAATTY	1 cut(s)	678
AcuI	CTGAAG	2 cut(s)	845, 1179
AcvI	CACGTG	1 cut(s)	130
AcyI	GRCGYC	2 cut(s)	171, 189
AfaI	GTAC	3 cut(s)	1150, 1215, 1664
AfiI	CCNNNNNNNGG	6 cut(s)	238, 274, 448, 757, 813, 852
AflIII	ACRYGT	1 cut(s)	129
AgsI	TTSAA	6 cut(s)	39, 544, 596, 650, 1022, 1236
AhlI	ACTAGT	1 cut(s)	1145
AjiI	CACGTC	1 cut(s)	1067
AjnI	CCWGG	3 cut(s)	83, 207, 1176
AjuI	GAANNNNNNNTTGG	2 cut(s)	1177, 1209
AloI	GAACNNNNNNTCC	2 cut(s)	1309, 1341
AluBI	AGCT	6 cut(s)	109, 205, 410, 711, 1041, 1331
AluI	AGCT	6 cut(s)	109, 205, 410, 711, 1041, 1331
Alw26I	GTCTC	6 cut(s)	24, 346, 640, 724, 863, 1690
AlwI	GGATC	7 cut(s)	63, 76, 223, 904, 1057, 1464, 1587
AoxI	GGCC	7 cut(s)	86, 124, 294, 348, 396, 738, 903
ApeKI	GCWGC	8 cut(s)	97, 100, 103, 106, 202, 566, 708, 1273
ApoI	RAATTY	1 cut(s)	678
AseI	ATTAAT	1 cut(s)	923
AspLEI	GCGC	6 cut(s)	81, 83, 191, 224, 361, 463
AspS9I	GGNCC	6 cut(s)	87, 124, 303, 349, 1180, 1369
AsuC2I	CCSGG	1 cut(s)	123
AsuHPI	GGTGA	6 cut(s)	274, 700, 1044, 1184, 1451, 1488
AvaII	GGWCC	3 cut(s)	303, 1180, 1369
BamHI	GGATCC	1 cut(s)	68
BanI	GGYRCC	3 cut(s)	188, 842, 1676
BanII	GRGCYC	1 cut(s)	859
BauI	CACGAG	1 cut(s)	660
BbrPI	CACGTG	1 cut(s)	130
BbsI	GAAGAC	2 cut(s)	985, 1366
BbvI	GCAGC	8 cut(s)	109, 112, 115, 118, 214, 553, 720, 1260
BccI	CCATC	2 cut(s)	577, 1498
BceAI	ACGGC	2 cut(s)	176, 281
BciT130I	CCWGG	3 cut(s)	85, 209, 1178
BclI	TGATCA	2 cut(s)	195, 1204
BcnI	CCSGG	1 cut(s)	123
BcoDI	GTCTC	6 cut(s)	24, 346, 640, 724, 863, 1690
BcuI	ACTAGT	1 cut(s)	1145
BfaI	CTAG	4 cut(s)	386, 696, 1146, 1548
BfmI	CTRYAG	4 cut(s)	411, 732, 1005, 1623
BfoI	RGCGCY	3 cut(s)	192, 225, 362
BfuAI	ACCTGC	1 cut(s)	454
BglI	GCCNNNNNGGC	1 cut(s)	356
BmcAI	AGTACT	1 cut(s)	1150
Bme1390I	CCNGG	4 cut(s)	85, 123, 209, 1178
Bme18I	GGWCC	3 cut(s)	303, 1180, 1369
BmgBI	CACGTC	1 cut(s)	1067
BmgT120I	GGNCC	6 cut(s)	87, 124, 303, 349, 1180, 1369
BmrFI	CCNGG	4 cut(s)	85, 123, 209, 1178
BmsI	GCATC	8 cut(s)	171, 243, 445, 751, 756, 947, 1237, 1520
BpiI	GAAGAC	2 cut(s)	985, 1366
BpmI	CTGGAG	5 cut(s)	191, 744, 758, 1021, 1276
BpuEI	CTTGAG	1 cut(s)	982
BpuMI	CCSGG	1 cut(s)	123
BsaAI	YACGTR	3 cut(s)	130, 1160, 1169
BsaBI	GATNNNNATC	2 cut(s)	233, 1347
BsaHI	GRCGYC	2 cut(s)	171, 189
BsaI	GGTCTC	1 cut(s)	346
BsaJI	CCNNGG	6 cut(s)	291, 345, 1462, 1505, 1529, 1710
BsaWI	WCCGGW	1 cut(s)	300
BsaXI	ACNNNNNCTCC	8 cut(s)	717, 747, 885, 915, 1274, 1304, 1309, 1339
Bsc4I	CCNNNNNNNGG	6 cut(s)	238, 274, 448, 757, 813, 852
Bse118I	RCCGGY	1 cut(s)	218
Bse1I	ACTGG	7 cut(s)	526, 762, 877, 1156, 1270, 1293, 1411
Bse8I	GATNNNNATC	2 cut(s)	233, 1347
BseBI	CCWGG	3 cut(s)	85, 209, 1178
BseDI	CCNNGG	6 cut(s)	291, 345, 1462, 1505, 1529, 1710
BseGI	GGATG	5 cut(s)	334, 460, 747, 766, 1486
BseJI	GATNNNNATC	2 cut(s)	233, 1347
BseLI	CCNNNNNNNGG	6 cut(s)	238, 274, 448, 757, 813, 852
BseMII	CTCAG	5 cut(s)	942, 1378, 1554, 1671, 1685
BseNI	ACTGG	7 cut(s)	526, 762, 877, 1156, 1270, 1293, 1411
BsePI	GCGCGC	1 cut(s)	79
BseRI	GAGGAG	1 cut(s)	1330
BseX3I	CGGCCG	2 cut(s)	294, 396
BseXI	GCAGC	8 cut(s)	109, 112, 115, 118, 214, 553, 720, 1260
BseYI	CCCAGC	2 cut(s)	818, 1102
Bsh1236I	CGCG	2 cut(s)	81, 270
Bsh1285I	CGRYCG	3 cut(s)	268, 297, 399
BshFI	GGCC	7 cut(s)	88, 126, 296, 350, 398, 740, 905
BshNI	GGYRCC	3 cut(s)	188, 842, 1676
BsiEI	CGRYCG	3 cut(s)	268, 297, 399
BsiSI	CCGG	4 cut(s)	122, 186, 219, 301
BslFI	GGGAC	4 cut(s)	940, 1061, 1166, 1382
BslI	CCNNNNNNNGG	6 cut(s)	238, 274, 448, 757, 813, 852
BsmAI	GTCTC	6 cut(s)	24, 346, 640, 724, 863, 1690
BsmFI	GGGAC	4 cut(s)	940, 1061, 1166, 1382
BsnI	GGCC	7 cut(s)	88, 126, 296, 350, 398, 740, 905
Bso31I	GGTCTC	1 cut(s)	346
Bsp1286I	GDGCHC	1 cut(s)	859
Bsp1407I	TGTACA	1 cut(s)	1213
Bsp19I	CCATGG	2 cut(s)	1505, 1710
BspANI	GGCC	7 cut(s)	88, 126, 296, 350, 398, 740, 905
BspCNI	CTCAG	5 cut(s)	943, 1377, 1553, 1670, 1686
BspFNI	CGCG	2 cut(s)	81, 270
BspMI	ACCTGC	1 cut(s)	454
BspPI	GGATC	7 cut(s)	63, 76, 223, 904, 1057, 1464, 1587
BspQI	GCTCTTC	1 cut(s)	864
BspT107I	GGYRCC	3 cut(s)	188, 842, 1676
BspTNI	GGTCTC	1 cut(s)	346
BsrBI	CCGCTC	2 cut(s)	287, 405
BsrFI	RCCGGY	1 cut(s)	218
BsrGI	TGTACA	1 cut(s)	1213
BsrI	ACTGG	7 cut(s)	526, 762, 877, 1156, 1270, 1293, 1411
BssAI	RCCGGY	1 cut(s)	218
BssECI	CCNNGG	6 cut(s)	291, 345, 1462, 1505, 1529, 1710
BssHII	GCGCGC	1 cut(s)	79
BssNAI	GTATAC	1 cut(s)	1157
BssNI	GRCGYC	2 cut(s)	171, 189
BssSI	CACGAG	1 cut(s)	660
BssT1I	CCWWGG	5 cut(s)	345, 1462, 1505, 1529, 1710
Bst1107I	GTATAC	1 cut(s)	1157
Bst2BI	CACGAG	1 cut(s)	660
Bst2UI	CCWGG	3 cut(s)	85, 209, 1178
Bst4CI	ACNGT	2 cut(s)	1325, 1624
Bst6I	CTCTTC	1 cut(s)	864
BstACI	GRCGYC	2 cut(s)	171, 189
BstAPI	GCANNNNNTGC	2 cut(s)	147, 629
BstAUI	TGTACA	1 cut(s)	1213
BstBAI	YACGTR	3 cut(s)	130, 1160, 1169
BstC8I	GCNNGC	6 cut(s)	81, 95, 143, 643, 969, 1015
BstDEI	CTNAG	6 cut(s)	225, 951, 1364, 1540, 1657, 1694
BstDSI	CCRYGG	2 cut(s)	1505, 1710
BstEII	GGTNACC	2 cut(s)	280, 1172
BstF5I	GGATG	5 cut(s)	334, 460, 747, 766, 1486
BstFNI	CGCG	2 cut(s)	81, 270
BstH2I	RGCGCY	3 cut(s)	192, 225, 362
BstHHI	GCGC	6 cut(s)	81, 83, 191, 224, 361, 463
BstMAI	GTCTC	6 cut(s)	24, 346, 640, 724, 863, 1690
BstMCI	CGRYCG	3 cut(s)	268, 297, 399
BstNI	CCWGG	3 cut(s)	85, 209, 1178
BstNSI	RCATGY	1 cut(s)	145
BstPI	GGTNACC	2 cut(s)	280, 1172
BstSCI	CCNGG	4 cut(s)	83, 121, 207, 1176
BstSFI	CTRYAG	4 cut(s)	411, 732, 1005, 1623
BstSNI	TACGTA	1 cut(s)	1160
BstUI	CGCG	2 cut(s)	81, 270
BstV1I	GCAGC	8 cut(s)	109, 112, 115, 118, 214, 553, 720, 1260
BstV2I	GAAGAC	2 cut(s)	985, 1366
BstX2I	RGATCY	4 cut(s)	68, 228, 896, 1579
BstXI	CCANNNNNNTGG	1 cut(s)	1506
BstYI	RGATCY	4 cut(s)	68, 228, 896, 1579
BstZ17I	GTATAC	1 cut(s)	1157
BstZI	CGGCCG	2 cut(s)	294, 396
BsuRI	GGCC	7 cut(s)	88, 126, 296, 350, 398, 740, 905
BtgI	CCRYGG	2 cut(s)	1505, 1710
BtrI	CACGTC	1 cut(s)	1067
BtsCI	GGATG	5 cut(s)	334, 460, 747, 766, 1486
BtsI	GCAGTG	1 cut(s)	1594
BtsIMutI	CAGTG	5 cut(s)	519, 755, 1300, 1594, 1665
BveI	ACCTGC	1 cut(s)	454
Cac8I	GCNNGC	6 cut(s)	81, 95, 143, 643, 969, 1015
CfoI	GCGC	6 cut(s)	81, 83, 191, 224, 361, 463
Cfr10I	RCCGGY	1 cut(s)	218
Cfr13I	GGNCC	6 cut(s)	87, 124, 303, 349, 1180, 1369
CseI	GACGC	2 cut(s)	160, 259
CsiI	ACCWGGT	1 cut(s)	1176
Csp6I	GTAC	3 cut(s)	1149, 1214, 1663
CviAII	CATG	4 cut(s)	142, 1418, 1506, 1711
CviQI	GTAC	3 cut(s)	1149, 1214, 1663
DdeI	CTNAG	6 cut(s)	225, 951, 1364, 1540, 1657, 1694
DinI	GGCGCC	1 cut(s)	190
EaeI	YGGCCR	3 cut(s)	294, 396, 903
EagI	CGGCCG	2 cut(s)	294, 396
Eam1104I	CTCTTC	1 cut(s)	864
EarI	CTCTTC	1 cut(s)	864
EciI	GGCGGA	1 cut(s)	467
EclXI	CGGCCG	2 cut(s)	294, 396
Eco105I	TACGTA	1 cut(s)	1160
Eco130I	CCWWGG	5 cut(s)	345, 1462, 1505, 1529, 1710
Eco24I	GRGCYC	1 cut(s)	859
Eco31I	GGTCTC	1 cut(s)	346
Eco47I	GGWCC	3 cut(s)	303, 1180, 1369
Eco52I	CGGCCG	2 cut(s)	294, 396
Eco57I	CTGAAG	2 cut(s)	845, 1179
Eco72I	CACGTG	1 cut(s)	130
Eco91I	GGTNACC	2 cut(s)	280, 1172
EcoO109I	RGGNCCY	3 cut(s)	87, 1180, 1369
EcoO65I	GGTNACC	2 cut(s)	280, 1172
EcoRII	CCWGG	3 cut(s)	83, 207, 1176
EcoT14I	CCWWGG	5 cut(s)	345, 1462, 1505, 1529, 1710
EcoT38I	GRGCYC	1 cut(s)	859
EgeI	GGCGCC	1 cut(s)	190
EheI	GGCGCC	1 cut(s)	190
ErhI	CCWWGG	5 cut(s)	345, 1462, 1505, 1529, 1710
FaeI	CATG	4 cut(s)	145, 1421, 1509, 1714
FalI	AAGNNNNNCTT	4 cut(s)	345, 377, 697, 729
FaqI	GGGAC	4 cut(s)	940, 1061, 1166, 1382
FatI	CATG	4 cut(s)	141, 1417, 1505, 1710
FauI	CCCGC	4 cut(s)	98, 167, 965, 1006
FauNDI	CATATG	1 cut(s)	1518
FbaI	TGATCA	2 cut(s)	195, 1204
FblI	GTMKAC	2 cut(s)	1156, 1429
FokI	GGATG	5 cut(s)	341, 467, 734, 773, 1473
FriOI	GRGCYC	1 cut(s)	859
FspBI	CTAG	4 cut(s)	386, 696, 1146, 1548
GlaI	GCGC	6 cut(s)	80, 82, 190, 223, 360, 462
GsaI	CCCAGC	2 cut(s)	822, 1106
GsuI	CTGGAG	5 cut(s)	191, 744, 758, 1021, 1276
HaeII	RGCGCY	3 cut(s)	192, 225, 362
HaeIII	GGCC	7 cut(s)	88, 126, 296, 350, 398, 740, 905
HapII	CCGG	4 cut(s)	122, 186, 219, 301
HgaI	GACGC	2 cut(s)	160, 259
HhaI	GCGC	6 cut(s)	81, 83, 191, 224, 361, 463
Hin1I	GRCGYC	2 cut(s)	171, 189
Hin1II	CATG	4 cut(s)	145, 1421, 1509, 1714
Hin6I	GCGC	6 cut(s)	79, 81, 189, 222, 359, 461
HinP1I	GCGC	6 cut(s)	79, 81, 189, 222, 359, 461
HincII	GTYRAC	1 cut(s)	1430
HindII	GTYRAC	1 cut(s)	1430
HpaII	CCGG	4 cut(s)	122, 186, 219, 301
HphI	GGTGA	6 cut(s)	274, 700, 1044, 1184, 1451, 1488
Hpy166II	GTNNAC	4 cut(s)	256, 1157, 1430, 1663
Hpy8I	GTNNAC	4 cut(s)	256, 1157, 1430, 1663
Hpy99I	CGWCG	1 cut(s)	275
HpyAV	CCTTC	5 cut(s)	145, 582, 590, 656, 1132
HpyCH4III	ACNGT	2 cut(s)	1325, 1624
HpyCH4IV	ACGT	5 cut(s)	129, 1066, 1159, 1168, 1397
HpyCH4V	TGCA	1 cut(s)	1243
HpyF3I	CTNAG	6 cut(s)	225, 951, 1364, 1540, 1657, 1694
HpySE526I	ACGT	5 cut(s)	129, 1066, 1159, 1168, 1397
Hsp92I	GRCGYC	2 cut(s)	171, 189
Hsp92II	CATG	4 cut(s)	145, 1421, 1509, 1714
HspAI	GCGC	6 cut(s)	79, 81, 189, 222, 359, 461
KasI	GGCGCC	1 cut(s)	188
KflI	GGGWCCC	1 cut(s)	1369
Ksp22I	TGATCA	2 cut(s)	195, 1204
LguI	GCTCTTC	1 cut(s)	864
LmnI	GCTCC	9 cut(s)	114, 210, 292, 407, 476, 574, 777, 1381, 1531
Lsp1109I	GCAGC	8 cut(s)	109, 112, 115, 118, 214, 553, 720, 1260
LweI	GCATC	8 cut(s)	171, 243, 445, 751, 756, 947, 1237, 1520
MabI	ACCWGGT	1 cut(s)	1176
MaeI	CTAG	4 cut(s)	386, 696, 1146, 1548
MaeII	ACGT	5 cut(s)	129, 1066, 1159, 1168, 1397
MaeIII	GTNAC	6 cut(s)	280, 784, 1141, 1172, 1411, 1609
MbiI	CCGCTC	2 cut(s)	287, 405
MboII	GAAGA	5 cut(s)	517, 851, 985, 1371, 1485
MflI	RGATCY	4 cut(s)	68, 228, 896, 1579
MhlI	GDGCHC	1 cut(s)	859
MluCI	AATT	9 cut(s)	39, 531, 551, 678, 924, 1306, 1477, 1569, 1681
Mly113I	GGCGCC	1 cut(s)	189
MlyI	GAGTC	6 cut(s)	251, 902, 962, 1028, 1356, 1461
MmeI	TCCRAC	3 cut(s)	406, 600, 871
MseI	TTAA	2 cut(s)	923, 1566
MspA1I	CMGCKG	1 cut(s)	1331
MspI	CCGG	4 cut(s)	122, 186, 219, 301
MspR9I	CCNGG	4 cut(s)	85, 123, 209, 1178
MvaI	CCWGG	3 cut(s)	85, 209, 1178
MvnI	CGCG	2 cut(s)	81, 270
NarI	GGCGCC	1 cut(s)	189
NciI	CCSGG	1 cut(s)	123
NcoI	CCATGG	2 cut(s)	1505, 1710
NdeI	CATATG	1 cut(s)	1518
NlaIII	CATG	4 cut(s)	145, 1421, 1509, 1714
NmeAIII	GCCGAG	3 cut(s)	272, 424, 766
NmuCI	GTSAC	3 cut(s)	280, 1172, 1609
NspI	RCATGY	1 cut(s)	145
PaeI	GCATGC	1 cut(s)	145
PauI	GCGCGC	1 cut(s)	79
PciSI	GCTCTTC	1 cut(s)	864
PcsI	WCGNNNNNNNCGW	1 cut(s)	1165
PfeI	GAWTC	6 cut(s)	382, 508, 796, 946, 1132, 1536
PflFI	GACNNNGTC	2 cut(s)	269, 1178
PleI	GAGTC	6 cut(s)	251, 902, 961, 1028, 1356, 1461
PluTI	GGCGCC	1 cut(s)	192
PmaCI	CACGTG	1 cut(s)	130
PmlI	CACGTG	1 cut(s)	130
PpsI	GAGTC	6 cut(s)	251, 902, 961, 1028, 1356, 1461
Ppu21I	YACGTR	3 cut(s)	130, 1160, 1169
PpuMI	RGGWCCY	2 cut(s)	1180, 1369
PshBI	ATTAAT	1 cut(s)	923
Psp5II	RGGWCCY	2 cut(s)	1180, 1369
Psp6I	CCWGG	3 cut(s)	83, 207, 1176
PspCI	CACGTG	1 cut(s)	130
PspEI	GGTNACC	2 cut(s)	280, 1172
PspFI	CCCAGC	2 cut(s)	818, 1102
PspGI	CCWGG	3 cut(s)	83, 207, 1176
PspPI	GGNCC	6 cut(s)	87, 124, 303, 349, 1180, 1369
PspPPI	RGGWCCY	2 cut(s)	1180, 1369
PsuI	RGATCY	4 cut(s)	68, 228, 896, 1579
PsyI	GACNNNGTC	2 cut(s)	269, 1178
PteI	GCGCGC	1 cut(s)	79
PvuII	CAGCTG	1 cut(s)	1331
RsaI	GTAC	3 cut(s)	1150, 1215, 1664
RsaNI	GTAC	3 cut(s)	1149, 1214, 1663
SalI	GTCGAC	1 cut(s)	1428
SapI	GCTCTTC	1 cut(s)	864
SaqAI	TTAA	2 cut(s)	923, 1566
Sau96I	GGNCC	6 cut(s)	87, 124, 303, 349, 1180, 1369
ScaI	AGTACT	1 cut(s)	1150
SchI	GAGTC	6 cut(s)	251, 902, 962, 1028, 1356, 1461
ScrFI	CCNGG	4 cut(s)	85, 123, 209, 1178
SduI	GDGCHC	1 cut(s)	859
SexAI	ACCWGGT	1 cut(s)	1176
SfaNI	GCATC	8 cut(s)	171, 243, 445, 751, 756, 947, 1237, 1520
SfcI	CTRYAG	4 cut(s)	411, 732, 1005, 1623
SfoI	GGCGCC	1 cut(s)	190
SgrAI	CRCCGGYG	1 cut(s)	218
SinI	GGWCC	3 cut(s)	303, 1180, 1369
SmlI	CTYRAG	1 cut(s)	997
SmoI	CTYRAG	1 cut(s)	997
SnaBI	TACGTA	1 cut(s)	1160
SpeI	ACTAGT	1 cut(s)	1145
SphI	GCATGC	1 cut(s)	145
Sse9I	AATT	9 cut(s)	39, 531, 551, 678, 924, 1306, 1477, 1569, 1681
SspDI	GGCGCC	1 cut(s)	188
SspI	AATATT	1 cut(s)	1261
SspMI	CTAG	4 cut(s)	386, 696, 1146, 1548
StyD4I	CCNGG	4 cut(s)	83, 121, 207, 1176
StyI	CCWWGG	5 cut(s)	345, 1462, 1505, 1529, 1710
TaaI	ACNGT	2 cut(s)	1325, 1624
TaiI	ACGT	5 cut(s)	132, 1069, 1162, 1171, 1400
TaqI	TCGA	4 cut(s)	74, 237, 375, 1429
TasI	AATT	9 cut(s)	39, 531, 551, 678, 924, 1306, 1477, 1569, 1681
TatI	WGTACW	2 cut(s)	1148, 1213
TauI	GCSGC	5 cut(s)	171, 398, 444, 461, 492
TfiI	GAWTC	6 cut(s)	382, 508, 796, 946, 1132, 1536
Tru1I	TTAA	2 cut(s)	923, 1566
Tru9I	TTAA	2 cut(s)	923, 1566
TscAI	CASTG	5 cut(s)	526, 762, 1300, 1594, 1665
TseFI	GTSAC	3 cut(s)	280, 1172, 1609
TseI	GCWGC	8 cut(s)	97, 100, 103, 106, 202, 566, 708, 1273
Tsp45I	GTSAC	3 cut(s)	280, 1172, 1609
TspDTI	ATGAA	1 cut(s)	930
TspGWI	ACGGA	3 cut(s)	81, 463, 1680
TspRI	CASTG	5 cut(s)	526, 762, 1300, 1594, 1665
Tth111I	GACNNNGTC	2 cut(s)	269, 1178
VpaK11BI	GGWCC	3 cut(s)	303, 1180, 1369
VspI	ATTAAT	1 cut(s)	923
XapI	RAATTY	1 cut(s)	678
XbaI	TCTAGA	1 cut(s)	385
XceI	RCATGY	1 cut(s)	145
XmiI	GTMKAC	2 cut(s)	1156, 1429
XspI	CTAG	4 cut(s)	386, 696, 1146, 1548
ZrmI	AGTACT	1 cut(s)	1150

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.