Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0002957

Physical Location & Seq

Genomic Coordinates Reverse (-)

28081353 .. 28087930

Gene Structure 6578 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G014930.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1941 bp

ATGGGAAGCACCTTTCTCTCTCTACCAGCGAAGCGTTCAATTTCTTCGACAATGTCCTCCTCTTCCTCCGAGCCCAGCTTAGAAAACGGATCCTCCAAGCGCTCCAGGTCGCGCCAGCAGCAGGCTCCGCTCACTGTTCCTCCAGGCCACGTCGCCTTCCGCATGCTCTGCCACGCCTCCCGCATCGGCGGCGTCATCGGCAAGTCCGGCACCGTCATCAAGCAGCTCCAGCAGGCCACCGGCGCAAAGATCAGAATCGAGGAGCCGCCCCAACTCGACTCGCCGGACCGGGTCGTCGTCGTCATTGCTCCCAGCGCAATCCGGTCCAAGATTGTGCTCAGTGGAGACCAAGAGATTGAGGTTTCCAAGGCGCAAGAGGCGCTTGTGAGAGTGTTCGAGAGGATTCTAGAGGTGGCGGCGGAGACCGGAGCGATAGGAGTAGGGGTTGGAGTGGTGTCTTGCCGGTTTCTGGCGGAGACGGCGCAGGTCGGCTCGGTGATAGGCAAGGGCGGCAAGGTGGTGGAGAAGATTAGAAAAGAGACTGGCTGTAAAATTAGGGTCTTGAATGAGAAATTGCCCGTTTGTGCTGCTCCTTCTGACGAGATGGTAGAGATAGAAGGGGATATTTTGGCTGTAAAGAAAGCACTTGTTGCTGTCTCCGGCCGTCTTCAAGATTGTCCACCAGTTGACAAGACAAGGATGACTGGAAGTAGGCCTATTGAGACCGTTCCTCGTGAATCTTTACCTGATATTCGTGTAGATCACCTTTCACAGAGGAACTCAGTGATTTCCAATTTGCCGAGCTGCTCCTTGAGTTATGCTTCAGGAGTTCGTCCGCCATCAATAGAGGCTGAAAGGATCTCAACACTGGATACAAGAACACTCCAGCAGGAAGTTACTTTTAAGATTCTTTGCGCCAATGATAGGGTTGGGGGTGTCATTGGAAAAGGGGGTGCCATTGTCAGGGCTCTTCAGAATGAGACTGGTGCTACTATAAGTGTTGGAGGATCTGTGGCCGAGTGTGATGAAAGATTAATTACTGTTACTGCATCAGAGAATCCTGAGTCCCGCTACTCGCCAGCACAAAAGGGTCTTGTTCTTGTCTTCTCAAGGTCTGTAGAGGCAGGCATTGAAAAGGGGCAAGACTCGAGCTCCAAAGGGTCACCTCTTAGTGCACGCCTTGTTGTCCCGACAAGCCAAGTTGGTTGTTTGCTGGGAAAAGGGGGTGTAATAGTTTCAGAGATTCGGAAGGTAACTGGTACCAGTATACGGATAATAGGTGGTGACCAGGTCCCGAAGTGTGCCTTAGAGAATGATGAAGTTGTACAGGTTTCAGGAAATTTTTCAAGTGTGCAAGATGCTTTGTACAATATTACTGGTAGGTTACGAGATAACCTTTTCTCCAACACAGTAAATAATTCTGGAAGGAGGAATACTTCAGCCGTGCTAACAGATACCAGTCCTTATGGAAGACTCAGGGATCCTGCTCCTACTGGATTTCAGCCTTCTTCATCAGTTGGTGTTACTCATGGTCTCGGTCGACATACCACTCTAACTCAAAGTATGGATCATCTTGGACTTTCCCATAATTTAGATCATCCTTCTTCACCAAGGCCATGGGCATCACAGATGGTTGCTCCAAGGGGAATCTCAGATACTGGCAGGGGTTTGACTTCTCTTCAAAGTGGCTCGGATCTTGGCAGTGGAAGCAAATCTGCCATCGTGACAAATACAACTGTAGAGATCATAGTTCCTGAAAATGTTATTAGCTCAGTGTACGGAGAGAATGGCACCAATTTGGCTCGACTGAGACAGGGAACAGGGGAGCTAACACGAAATAAACTAAGTTGGAGCATGTCCTGCATCATACAAGAGAATATGAGCAAAGGAGGAAGGTGGAAACCCAACCCAATCAACTGGACACTGCCTCCTGCGAGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0007275 GO:0008150 GO:0009791 GO:0009908 GO:0009909 GO:0009911 GO:0016604 GO:0016607 GO:0022414 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045595 GO:0045596 GO:0048367 GO:0048437 GO:0048497 GO:0048518 GO:0048519 GO:0048523 GO:0048580 GO:0048582 GO:0048608 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051093 GO:0051094 GO:0051239 GO:0051240 GO:0061458 GO:0065007 GO:0070013 GO:0090567 GO:0090700 GO:0099402 GO:2000026 GO:2000241 GO:2000243

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

KH_1

Protein Analysis

646

Amino Acids

68.38

Weight (kDa)

9.24

Isoelectric Point (pI)

51.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
KH_1	PF00013	53 - 104	2.4e-12	KH domain
KH_1	PF00013	154 - 219	1.9e-13	KH domain
KH_1	PF00013	300 - 352	1.8e-11	KH domain
KH_1	PF00013	392 - 458	1e-14	KH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002957)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G64390 AT5G64390 AT5G64390
fragaria_vesca	FvH4_2g11560 FvH4_2g11560 FvH4_2g11560
malus_domestica	MD05G1048400.v1.1 MD10G1054800.v1.1
prunus_persica	Prupe.8G070900_v2.0.a1
pyrus_communis	pycom05g04000 pycom10g04180
rosa_chinensis	RchiOBHm_Chr1g0353311 RchiOBHm_Chr4g0385021 RchiOBHm_Chr6g0270731 RchiOBHm_Chr6g0272811
rosa_laevigata	RLG00000013774
rosa_multiflora	Rmu_co8284529.1_g000001 Rmu_sc0000642.1_g000012 Rmu_sc0041041.1_g000001
rosa_roxburghii	Rroxscaffold_2G00085770 Rroxscaffold_7G00197640
rosa_rugosa	Rorug06G0056000 Rorug06G0056100 Rorug06G0056200
rosa_samantha	Rh2DG204000 Rh4CG002400 Rh4CG168900 Rh6AG157400 Rh6AG175200 Rh6BG140200 Rh6BG178600 Rh6CG174800 Rh6DG123600 Rh6DG167400 Rh6DG180500 Rh7AG209600 Rh7CG359700
rosa_wichuraiana	Rw6G014930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	293
Acc36I	ACCTGC	1 cut(s)	475
Acc65I	GGTACC	1 cut(s)	1259
AccB1I	GGYRCC	4 cut(s)	209, 953, 1259, 1790
AccBSI	CCGCTC	1 cut(s)	130
AccI	GTMKAC	2 cut(s)	1267, 1540
AccII	CGCG	1 cut(s)	112
AclWI	GGATC	8 cut(s)	84, 97, 866, 1015, 1475, 1488, 1575, 1701
AcoI	YGGCCR	2 cut(s)	661, 1014
AcsI	RAATTY	1 cut(s)	1339
AcuI	CTGAAG	3 cut(s)	807, 956, 1422
AcyI	GRCGYC	1 cut(s)	192
AfaI	GTAC	4 cut(s)	1261, 1326, 1367, 1778
AfeI	AGCGCT	1 cut(s)	101
AfiI	CCNNNNNNNGG	5 cut(s)	121, 469, 924, 963, 1269
AgsI	TTSAA	6 cut(s)	39, 565, 671, 1133, 1347, 1682
AjiI	CACGTC	1 cut(s)	151
AjnI	CCWGG	3 cut(s)	104, 142, 1287
AluBI	AGCT	7 cut(s)	78, 226, 804, 1152, 1770, 1828, 1938
AluI	AGCT	7 cut(s)	78, 226, 804, 1152, 1770, 1828, 1938
Alw21I	GWGCWC	3 cut(s)	339, 1154, 1177
Alw26I	GTCTC	9 cut(s)	339, 416, 470, 533, 661, 716, 974, 1538, 1804
Alw44I	GTGCAC	1 cut(s)	1173
AlwI	GGATC	8 cut(s)	84, 97, 866, 1015, 1475, 1488, 1575, 1701
AlwNI	CAGNNNCTG	1 cut(s)	1658
Ama87I	CYCGRG	1 cut(s)	1147
Aor51HI	AGCGCT	1 cut(s)	101
AoxI	GGCC	6 cut(s)	145, 234, 661, 713, 1014, 1613
ApaLI	GTGCAC	1 cut(s)	1173
ApeKI	GCWGC	4 cut(s)	118, 223, 587, 804
ApoI	RAATTY	1 cut(s)	1339
AseI	ATTAAT	1 cut(s)	1034
Asp700I	GAANNNNTTC	1 cut(s)	1342
Asp718I	GGTACC	1 cut(s)	1259
AspLEI	GCGC	8 cut(s)	102, 114, 245, 317, 373, 382, 484, 917
AspS9I	GGNCC	3 cut(s)	286, 324, 1291
AsuC2I	CCSGG	1 cut(s)	290
AsuHPI	GGTGA	5 cut(s)	508, 755, 1155, 1295, 1599
AvaI	CYCGRG	1 cut(s)	1147
AvaII	GGWCC	3 cut(s)	286, 324, 1291
BaeGI	GKGCMC	1 cut(s)	1177
BamHI	GGATCC	2 cut(s)	89, 1480
BanI	GGYRCC	4 cut(s)	209, 953, 1259, 1790
BanII	GRGCYC	3 cut(s)	75, 970, 1154
BarI	GAAGNNNNNNTAC	2 cut(s)	1417, 1449
BauI	CACGAG	1 cut(s)	732
BbsI	GAAGAC	3 cut(s)	659, 1096, 1477
Bbv12I	GWGCWC	3 cut(s)	339, 1154, 1177
BbvI	GCAGC	4 cut(s)	130, 235, 574, 791
BccI	CCATC	4 cut(s)	598, 847, 1624, 1727
BceAI	ACGGC	3 cut(s)	495, 648, 1427
BciT130I	CCWGG	3 cut(s)	106, 144, 1289
BciVI	GTATCC	1 cut(s)	865
BcnI	CCSGG	1 cut(s)	290
BcoDI	GTCTC	9 cut(s)	339, 416, 470, 533, 661, 716, 974, 1538, 1804
BfaI	CTAG	1 cut(s)	407
BfmI	CTRYAG	2 cut(s)	1116, 1737
BfoI	RGCGCY	2 cut(s)	103, 383
BfuAI	ACCTGC	1 cut(s)	475
BfuI	GTATCC	1 cut(s)	865
BisI	GCNGC	8 cut(s)	119, 190, 224, 266, 417, 511, 588, 805
BlsI	GCNGC	8 cut(s)	120, 191, 225, 267, 418, 512, 589, 806
Bme1390I	CCNGG	4 cut(s)	106, 144, 290, 1289
Bme18I	GGWCC	3 cut(s)	286, 324, 1291
BmeT110I	CYCGRG	1 cut(s)	1147
BmgBI	CACGTC	1 cut(s)	151
BmgT120I	GGNCC	3 cut(s)	286, 324, 1291
BmiI	GGNNCC	9 cut(s)	91, 126, 211, 264, 955, 1261, 1293, 1482, 1792
BmrFI	CCNGG	4 cut(s)	106, 144, 290, 1289
BmsI	GCATC	5 cut(s)	192, 1058, 1348, 1631, 1872
BpiI	GAAGAC	3 cut(s)	659, 1096, 1477
BpmI	CTGGAG	4 cut(s)	88, 126, 212, 869
BpuEI	CTTGAG	2 cut(s)	832, 1093
BpuMI	CCSGG	1 cut(s)	290
BsaBI	GATNNNNATC	1 cut(s)	254
BsaHI	GRCGYC	1 cut(s)	192
BsaI	GGTCTC	4 cut(s)	339, 416, 716, 1538
BsaJI	CCNNGG	4 cut(s)	366, 1610, 1616, 1640
BsaWI	WCCGGW	2 cut(s)	321, 425
Bsc4I	CCNNNNNNNGG	5 cut(s)	121, 469, 924, 963, 1269
Bse118I	RCCGGY	2 cut(s)	239, 462
Bse3DI	GCAATG	1 cut(s)	303
Bse8I	GATNNNNATC	1 cut(s)	254
BseBI	CCWGG	3 cut(s)	106, 144, 1289
BseDI	CCNNGG	4 cut(s)	366, 1610, 1616, 1640
BseGI	GGATG	2 cut(s)	705, 1597
BseJI	GATNNNNATC	1 cut(s)	254
BseLI	CCNNNNNNNGG	5 cut(s)	121, 469, 924, 963, 1269
BseMI	GCAATG	1 cut(s)	303
BseMII	CTCAG	7 cut(s)	352, 795, 1053, 1489, 1665, 1785, 1799
BseRI	GAGGAG	2 cut(s)	49, 275
BseSI	GKGCMC	1 cut(s)	1177
BseX3I	CGGCCG	1 cut(s)	661
BseXI	GCAGC	4 cut(s)	130, 235, 574, 791
BseYI	CCCAGC	3 cut(s)	74, 311, 1213
Bsh1236I	CGCG	1 cut(s)	112
Bsh1285I	CGRYCG	2 cut(s)	664, 1540
BshFI	GGCC	6 cut(s)	147, 236, 663, 715, 1016, 1615
BshNI	GGYRCC	4 cut(s)	209, 953, 1259, 1790
BsiEI	CGRYCG	2 cut(s)	664, 1540
BsiHKAI	GWGCWC	3 cut(s)	339, 1154, 1177
BsiHKCI	CYCGRG	1 cut(s)	1147
BsiSI	CCGG	8 cut(s)	207, 240, 284, 289, 322, 426, 463, 660
BslFI	GGGAC	3 cut(s)	1051, 1172, 1277
BslI	CCNNNNNNNGG	5 cut(s)	121, 469, 924, 963, 1269
BsmAI	GTCTC	9 cut(s)	339, 416, 470, 533, 661, 716, 974, 1538, 1804
BsmBI	CGTCTC	1 cut(s)	470
BsmFI	GGGAC	3 cut(s)	1051, 1172, 1277
BsnI	GGCC	6 cut(s)	147, 236, 663, 715, 1016, 1615
Bso31I	GGTCTC	4 cut(s)	339, 416, 716, 1538
BsoBI	CYCGRG	1 cut(s)	1147
Bsp1286I	GDGCHC	5 cut(s)	75, 339, 970, 1154, 1177
Bsp1407I	TGTACA	2 cut(s)	1324, 1365
Bsp19I	CCATGG	1 cut(s)	1616
BspANI	GGCC	6 cut(s)	147, 236, 663, 715, 1016, 1615
BspCNI	CTCAG	7 cut(s)	351, 794, 1054, 1488, 1664, 1784, 1800
BspFNI	CGCG	1 cut(s)	112
BspLI	GGNNCC	9 cut(s)	91, 126, 211, 264, 955, 1261, 1293, 1482, 1792
BspMI	ACCTGC	1 cut(s)	475
BspPI	GGATC	8 cut(s)	84, 97, 866, 1015, 1475, 1488, 1575, 1701
BspQI	GCTCTTC	1 cut(s)	975
BspT107I	GGYRCC	4 cut(s)	209, 953, 1259, 1790
BspTNI	GGTCTC	4 cut(s)	339, 416, 716, 1538
BsrBI	CCGCTC	1 cut(s)	130
BsrDI	GCAATG	1 cut(s)	303
BsrFI	RCCGGY	2 cut(s)	239, 462
BsrGI	TGTACA	2 cut(s)	1324, 1365
BssAI	RCCGGY	2 cut(s)	239, 462
BssECI	CCNNGG	4 cut(s)	366, 1610, 1616, 1640
BssNAI	GTATAC	1 cut(s)	1268
BssNI	GRCGYC	1 cut(s)	192
BssSI	CACGAG	1 cut(s)	732
BssT1I	CCWWGG	4 cut(s)	366, 1610, 1616, 1640
Bst1107I	GTATAC	1 cut(s)	1268
Bst2BI	CACGAG	1 cut(s)	732
Bst2UI	CCWGG	3 cut(s)	106, 144, 1289
Bst4CI	ACNGT	6 cut(s)	136, 214, 727, 1042, 1411, 1738
Bst6I	CTCTTC	3 cut(s)	67, 975, 1683
BstACI	GRCGYC	1 cut(s)	192
BstAPI	GCANNNNNTGC	3 cut(s)	168, 650, 1860
BstAUI	TGTACA	2 cut(s)	1324, 1365
BstC8I	GCNNGC	8 cut(s)	116, 123, 164, 234, 1080, 1126, 1177, 1936
BstDSI	CCRYGG	1 cut(s)	1616
BstEII	GGTNACC	2 cut(s)	1161, 1283
BstF5I	GGATG	2 cut(s)	705, 1597
BstFNI	CGCG	1 cut(s)	112
BstH2I	RGCGCY	2 cut(s)	103, 383
BstHHI	GCGC	8 cut(s)	102, 114, 245, 317, 373, 382, 484, 917
BstMAI	GTCTC	9 cut(s)	339, 416, 470, 533, 661, 716, 974, 1538, 1804
BstMCI	CGRYCG	2 cut(s)	664, 1540
BstNI	CCWGG	3 cut(s)	106, 144, 1289
BstNSI	RCATGY	2 cut(s)	166, 1858
BstPI	GGTNACC	2 cut(s)	1161, 1283
BstSCI	CCNGG	4 cut(s)	104, 142, 288, 1287
BstSFI	CTRYAG	2 cut(s)	1116, 1737
BstSLI	GKGCMC	1 cut(s)	1177
BstUI	CGCG	1 cut(s)	112
BstV1I	GCAGC	4 cut(s)	130, 235, 574, 791
BstV2I	GAAGAC	3 cut(s)	659, 1096, 1477
BstX2I	RGATCY	5 cut(s)	89, 858, 1007, 1480, 1693
BstXI	CCANNNNNNTGG	2 cut(s)	1617, 1917
BstYI	RGATCY	5 cut(s)	89, 858, 1007, 1480, 1693
BstZ17I	GTATAC	1 cut(s)	1268
BstZI	CGGCCG	1 cut(s)	661
BsuI	GTATCC	1 cut(s)	865
BsuRI	GGCC	6 cut(s)	147, 236, 663, 715, 1016, 1615
BtgI	CCRYGG	1 cut(s)	1616
BtrI	CACGTC	1 cut(s)	151
BtsCI	GGATG	2 cut(s)	705, 1597
BtsI	GCAGTG	2 cut(s)	1708, 1922
BtsIMutI	CAGTG	7 cut(s)	132, 346, 789, 866, 1708, 1779, 1922
BveI	ACCTGC	1 cut(s)	475
Cac8I	GCNNGC	8 cut(s)	116, 123, 164, 234, 1080, 1126, 1177, 1936
CaiI	CAGNNNCTG	1 cut(s)	1658
CfoI	GCGC	8 cut(s)	102, 114, 245, 317, 373, 382, 484, 917
Cfr10I	RCCGGY	2 cut(s)	239, 462
Cfr13I	GGNCC	3 cut(s)	286, 324, 1291
CpoI	CGGWCCG	1 cut(s)	286
CseI	GACGC	1 cut(s)	181
CsiI	ACCWGGT	1 cut(s)	1287
Csp6I	GTAC	4 cut(s)	1260, 1325, 1366, 1777
CspI	CGGWCCG	1 cut(s)	286
CviAII	CATG	4 cut(s)	163, 1529, 1617, 1855
CviQI	GTAC	4 cut(s)	1260, 1325, 1366, 1777
DrdI	GACNNNNNNGTC	1 cut(s)	293
DseDI	GACNNNNNNGTC	1 cut(s)	293
EaeI	YGGCCR	2 cut(s)	661, 1014
EagI	CGGCCG	1 cut(s)	661
Eam1104I	CTCTTC	3 cut(s)	67, 975, 1683
EarI	CTCTTC	3 cut(s)	67, 975, 1683
EciI	GGCGGA	3 cut(s)	434, 488, 825
Ecl136II	GAGCTC	1 cut(s)	1152
EclXI	CGGCCG	1 cut(s)	661
Eco130I	CCWWGG	4 cut(s)	366, 1610, 1616, 1640
Eco147I	AGGCCT	1 cut(s)	715
Eco24I	GRGCYC	3 cut(s)	75, 970, 1154
Eco31I	GGTCTC	4 cut(s)	339, 416, 716, 1538
Eco47I	GGWCC	3 cut(s)	286, 324, 1291
Eco47III	AGCGCT	1 cut(s)	101
Eco52I	CGGCCG	1 cut(s)	661
Eco53kI	GAGCTC	1 cut(s)	1152
Eco57I	CTGAAG	3 cut(s)	807, 956, 1422
Eco88I	CYCGRG	1 cut(s)	1147
Eco91I	GGTNACC	2 cut(s)	1161, 1283
EcoICRI	GAGCTC	1 cut(s)	1152
EcoO109I	RGGNCCY	1 cut(s)	1291
EcoO65I	GGTNACC	2 cut(s)	1161, 1283
EcoRII	CCWGG	3 cut(s)	104, 142, 1287
EcoT14I	CCWWGG	4 cut(s)	366, 1610, 1616, 1640
EcoT38I	GRGCYC	3 cut(s)	75, 970, 1154
ErhI	CCWWGG	4 cut(s)	366, 1610, 1616, 1640
Esp3I	CGTCTC	1 cut(s)	470
FaeI	CATG	4 cut(s)	166, 1532, 1620, 1858
FalI	AAGNNNNNCTT	4 cut(s)	366, 398, 1289, 1321
FaqI	GGGAC	3 cut(s)	1051, 1172, 1277
FatI	CATG	4 cut(s)	162, 1528, 1616, 1854
FauI	CCCGC	2 cut(s)	188, 1076
FblI	GTMKAC	2 cut(s)	1267, 1540
Fnu4HI	GCNGC	8 cut(s)	119, 190, 224, 266, 417, 511, 588, 805
FokI	GGATG	2 cut(s)	712, 1584
FriOI	GRGCYC	3 cut(s)	75, 970, 1154
Fsp4HI	GCNGC	8 cut(s)	119, 190, 224, 266, 417, 511, 588, 805
FspBI	CTAG	1 cut(s)	407
GlaI	GCGC	8 cut(s)	101, 113, 244, 316, 372, 381, 483, 916
GluI	GCNGC	8 cut(s)	119, 190, 224, 266, 417, 511, 588, 805
GsaI	CCCAGC	3 cut(s)	78, 315, 1217
GsuI	CTGGAG	4 cut(s)	88, 126, 212, 869
HaeII	RGCGCY	2 cut(s)	103, 383
HaeIII	GGCC	6 cut(s)	147, 236, 663, 715, 1016, 1615
HapII	CCGG	8 cut(s)	207, 240, 284, 289, 322, 426, 463, 660
HgaI	GACGC	1 cut(s)	181
HhaI	GCGC	8 cut(s)	102, 114, 245, 317, 373, 382, 484, 917
Hin1I	GRCGYC	1 cut(s)	192
Hin1II	CATG	4 cut(s)	166, 1532, 1620, 1858
Hin6I	GCGC	8 cut(s)	100, 112, 243, 315, 371, 380, 482, 915
HinP1I	GCGC	8 cut(s)	100, 112, 243, 315, 371, 380, 482, 915
HincII	GTYRAC	2 cut(s)	688, 1541
HindII	GTYRAC	2 cut(s)	688, 1541
HpaII	CCGG	8 cut(s)	207, 240, 284, 289, 322, 426, 463, 660
HphI	GGTGA	5 cut(s)	508, 755, 1155, 1295, 1599
Hpy166II	GTNNAC	6 cut(s)	680, 688, 1175, 1268, 1541, 1777
Hpy188I	TCNGA	9 cut(s)	70, 254, 598, 975, 1054, 1240, 1248, 1654, 1693
Hpy8I	GTNNAC	6 cut(s)	680, 688, 1175, 1268, 1541, 1777
Hpy99I	CGWCG	3 cut(s)	155, 299, 302
HpyAV	CCTTC	8 cut(s)	166, 603, 611, 1243, 1419, 1515, 1611, 1887
HpyCH4III	ACNGT	6 cut(s)	136, 214, 727, 1042, 1411, 1738
HpyCH4IV	ACGT	1 cut(s)	150
HpyCH4V	TGCA	4 cut(s)	1049, 1175, 1354, 1863
HpySE526I	ACGT	1 cut(s)	150
Hsp92I	GRCGYC	1 cut(s)	192
Hsp92II	CATG	4 cut(s)	166, 1532, 1620, 1858
HspAI	GCGC	8 cut(s)	100, 112, 243, 315, 371, 380, 482, 915
KpnI	GGTACC	1 cut(s)	1263
LguI	GCTCTTC	1 cut(s)	975
Lsp1109I	GCAGC	4 cut(s)	130, 235, 574, 791
LweI	GCATC	5 cut(s)	192, 1058, 1348, 1631, 1872
MabI	ACCWGGT	1 cut(s)	1287
MaeI	CTAG	1 cut(s)	407
MaeII	ACGT	1 cut(s)	150
MaeIII	GTNAC	8 cut(s)	895, 1042, 1161, 1252, 1283, 1383, 1522, 1723
MbiI	CCGCTC	1 cut(s)	130
MflI	RGATCY	5 cut(s)	89, 858, 1007, 1480, 1693
MhlI	GDGCHC	5 cut(s)	75, 339, 970, 1154, 1177
MluCI	AATT	9 cut(s)	39, 552, 572, 793, 1035, 1339, 1417, 1588, 1795
MlyI	GAGTC	4 cut(s)	272, 1073, 1139, 1467
MmeI	TCCRAC	4 cut(s)	427, 982, 1428, 1829
MroXI	GAANNNNTTC	1 cut(s)	1342
MseI	TTAA	2 cut(s)	903, 1034
MspI	CCGG	8 cut(s)	207, 240, 284, 289, 322, 426, 463, 660
MspR9I	CCNGG	4 cut(s)	106, 144, 290, 1289
MvaI	CCWGG	3 cut(s)	106, 144, 1289
MvnI	CGCG	1 cut(s)	112
NciI	CCSGG	1 cut(s)	290
NcoI	CCATGG	1 cut(s)	1616
NlaIII	CATG	4 cut(s)	166, 1532, 1620, 1858
NlaIV	GGNNCC	9 cut(s)	91, 126, 211, 264, 955, 1261, 1293, 1482, 1792
NmeAIII	GCCGAG	2 cut(s)	825, 1042
NmuCI	GTSAC	3 cut(s)	1161, 1283, 1723
NspI	RCATGY	2 cut(s)	166, 1858
PaeI	GCATGC	1 cut(s)	166
PaeR7I	CTCGAG	1 cut(s)	1147
PceI	AGGCCT	1 cut(s)	715
PciSI	GCTCTTC	1 cut(s)	975
PdmI	GAANNNNTTC	1 cut(s)	1342
PfeI	GAWTC	7 cut(s)	255, 403, 737, 907, 1057, 1243, 1647
PflFI	GACNNNGTC	3 cut(s)	52, 290, 1289
PkrI	GCNGC	8 cut(s)	120, 191, 225, 267, 418, 512, 589, 806
PleI	GAGTC	4 cut(s)	272, 1072, 1139, 1467
PpsI	GAGTC	4 cut(s)	272, 1072, 1139, 1467
PpuMI	RGGWCCY	1 cut(s)	1291
PshBI	ATTAAT	1 cut(s)	1034
Psp124BI	GAGCTC	1 cut(s)	1154
Psp5II	RGGWCCY	1 cut(s)	1291
Psp6I	CCWGG	3 cut(s)	104, 142, 1287
PspEI	GGTNACC	2 cut(s)	1161, 1283
PspFI	CCCAGC	3 cut(s)	74, 311, 1213
PspGI	CCWGG	3 cut(s)	104, 142, 1287
PspN4I	GGNNCC	9 cut(s)	91, 126, 211, 264, 955, 1261, 1293, 1482, 1792
PspPI	GGNCC	3 cut(s)	286, 324, 1291
PspPPI	RGGWCCY	1 cut(s)	1291
PspXI	VCTCGAGB	1 cut(s)	1147
PstNI	CAGNNNCTG	1 cut(s)	1658
PsuI	RGATCY	5 cut(s)	89, 858, 1007, 1480, 1693
PsyI	GACNNNGTC	3 cut(s)	52, 290, 1289
RsaI	GTAC	4 cut(s)	1261, 1326, 1367, 1778
RsaNI	GTAC	4 cut(s)	1260, 1325, 1366, 1777
Rsr2I	CGGWCCG	1 cut(s)	286
RsrII	CGGWCCG	1 cut(s)	286
SacI	GAGCTC	1 cut(s)	1154
SalI	GTCGAC	1 cut(s)	1539
SapI	GCTCTTC	1 cut(s)	975
SaqAI	TTAA	2 cut(s)	903, 1034
SatI	GCNGC	8 cut(s)	119, 190, 224, 266, 417, 511, 588, 805
Sau96I	GGNCC	3 cut(s)	286, 324, 1291
SchI	GAGTC	4 cut(s)	272, 1073, 1139, 1467
ScrFI	CCNGG	4 cut(s)	106, 144, 290, 1289
SduI	GDGCHC	5 cut(s)	75, 339, 970, 1154, 1177
SexAI	ACCWGGT	1 cut(s)	1287
SfaNI	GCATC	5 cut(s)	192, 1058, 1348, 1631, 1872
SfcI	CTRYAG	2 cut(s)	1116, 1737
Sfr274I	CTCGAG	1 cut(s)	1147
SgrAI	CRCCGGYG	1 cut(s)	239
SinI	GGWCC	3 cut(s)	286, 324, 1291
SlaI	CTCGAG	1 cut(s)	1147
SmlI	CTYRAG	3 cut(s)	811, 1108, 1147
SmoI	CTYRAG	3 cut(s)	811, 1108, 1147
SphI	GCATGC	1 cut(s)	166
Sse9I	AATT	9 cut(s)	39, 552, 572, 793, 1035, 1339, 1417, 1588, 1795
SseBI	AGGCCT	1 cut(s)	715
SspI	AATATT	1 cut(s)	1372
SspMI	CTAG	1 cut(s)	407
SstI	GAGCTC	1 cut(s)	1154
StuI	AGGCCT	1 cut(s)	715
StyD4I	CCNGG	4 cut(s)	104, 142, 288, 1287
StyI	CCWWGG	4 cut(s)	366, 1610, 1616, 1640
TaaI	ACNGT	6 cut(s)	136, 214, 727, 1042, 1411, 1738
TaiI	ACGT	1 cut(s)	153
TaqI	TCGA	7 cut(s)	47, 258, 276, 396, 1148, 1540, 1804
TaqII	GACCGA	1 cut(s)	1526
TasI	AATT	9 cut(s)	39, 552, 572, 793, 1035, 1339, 1417, 1588, 1795
TatI	WGTACW	2 cut(s)	1324, 1365
TauI	GCSGC	4 cut(s)	192, 268, 419, 513
TfiI	GAWTC	7 cut(s)	255, 403, 737, 907, 1057, 1243, 1647
Tru1I	TTAA	2 cut(s)	903, 1034
Tru9I	TTAA	2 cut(s)	903, 1034
TscAI	CASTG	7 cut(s)	139, 346, 789, 873, 1708, 1779, 1929
TseFI	GTSAC	3 cut(s)	1161, 1283, 1723
TseI	GCWGC	4 cut(s)	118, 223, 587, 804
Tsp45I	GTSAC	3 cut(s)	1161, 1283, 1723
TspDTI	ATGAA	3 cut(s)	1041, 1332, 1500
TspGWI	ACGGA	3 cut(s)	102, 1285, 1794
TspRI	CASTG	7 cut(s)	139, 346, 789, 873, 1708, 1779, 1929
Tth111I	GACNNNGTC	3 cut(s)	52, 290, 1289
VneI	GTGCAC	1 cut(s)	1173
VpaK11BI	GGWCC	3 cut(s)	286, 324, 1291
VspI	ATTAAT	1 cut(s)	1034
XapI	RAATTY	1 cut(s)	1339
XbaI	TCTAGA	1 cut(s)	406
XceI	RCATGY	2 cut(s)	166, 1858
XhoI	CTCGAG	1 cut(s)	1147
XmiI	GTMKAC	2 cut(s)	1267, 1540
XmnI	GAANNNNTTC	1 cut(s)	1342
XspI	CTAG	1 cut(s)	407

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.