Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0002957

Physical Location & Seq

Genomic Coordinates Forward (+)

40806383 .. 40811011

Gene Structure 4629 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000013774

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1887 bp

ATGTCCTCCTTTTCATCCGAGCCCAGCTTAGAAAACGGATCCTCCAAGCGCCCCAGGCCGCGCCAGCAGCAGGCTCCGCTCACTGTTCCTCCAGGCCACGTCGCCTTCCGCATGCTCTGCCACGCCTCCCGCATCGGCGGCGTCATCGGCAAGTCCGGCACCGTCATCAAGCAGCTCCAGCAGGCTACCGGCGCAAAGATCAGAATCGAGGAGCCGCCCCAACTCGACTCGCCGGACCGGGTCGTCGTCGTCATCGCTCCCAGCGCAATCCGGTCCAAGATTGTGGTCAGTGGAGACCAAGAGATTGAGGTTTCCAAGGCGCAAGAGGCGCTTTTGAGAGTGTTCGAGAGGATTCTGGAGGTGGCGGCGGAGACCGGAGCGATAGGAGTAGGGGTTGGAGTGGTGTCTTGCCGGTTTCTGGCGGAGACGGCGCAGGTCGGCTCGGTGATAGGCAAGGGCGGCAAGGTGGTGGAGAAGATTAGAAAAGAGACTGGGTGTAAAATTAGGGTCTTGAATGAGAAATTGCCCGTTTGTGCTGCTCCTTCTGACGAGATGGTAGAGATAGAAGGGGATATTTTGGCTGTAAAGAAAGCACTTGTTGCTGTCTCCGGCCGTCTTCAAGATTGTGCACCAGTTGACAAGACAAGGATGACTGGAAGTAGGCCTATTGAGACAGTTCCTGATATTCGTGTAGATCACCTTTCACAGAGGAACTCAGTGATTTCCAATTTGCCGAGCAGCTCCATGAGTTTTGCTTCAGGTGTTCGTCCGCCATCAATAGAGGCTGAAAGGATCTCAACACTTGATACAAGAACGCTCCAGCAGGAAGTTACTTTTAATATTCTTTGTGCCAATGATAGGGTTGGGGGTGTCATTGGAAAGGGGGGTGCCATTGTCAGGGCTCTTCAGAATGAGACTGGTGCTACTATAAGTGTTGGAGGATCTGTGGCCGAGTGTGATGAAAGATTAATTACTGTTACTGCATCAGAGAATCCTGAGTCCCGCTACTCGCCAGCTCAAAAGGGTCTTGTTCTTGTCTTCTCAAGGTCTGTAGAGGCGGGCATTGAAAAGGGGCAAGACTCGAGCTCCAAAGGGTCACCTCTTATTGCGCGCCTTGTTGTCCCGACAAGCCAAGTTGGTTGTTTGCTGGGAAAAGGGGGTGTAATAGTTTCAGAGATTCGGAAGGTAACTGGTACTGGTATACGGATAATAGGTGGTGACCAGGTCCCGAAGTGTGCCTTAGAGAATGACGAAGTTGTACAGGTTTCAGGAGATTTTTCAAATGTGCAAGATGCTTTGTACAATATTACTGGTAGATTACGAGATAACCTTTTCTCCAACACAGTAAATAATTCTGGAAGGAGGAATAGTTCAGCCGTGCTATCAGATACCAGTCCTTATGGAAGACTCAGGGATCCTGCTCCTATTGGATTTCAGCCTTCTTCATCAGTTGGTGTTACTCATGGTCTCGGTCGACATACTACTCTAACTCAAAGTATGGATCATCTTGGACTTTCCCATAATTTAGATCATCCTTCTTCACCAAGGCCATGGGCATCACAGATGGTTGCTCCAAGGGGAATCTCAGATACTGGCAGGGGTTTGACTTCTCTAAAAAGTGGCTCGGATCTTGGCAGTGGAAGCAAATCTGCTATCGTGACAAATACAACTGTAGAGATCATAGTTCCTGAAAATGTTATTGGCTCAGTGTACGGAGAGAATGGCACCAATTTGGCTCGACTGAGACAGATTTCCGGTGCCAAGGTCATAGTGCATGAACCCCGTCCCGGAACAACTGATAGGATTATTGTCATATCTGGGACACCTGACGAAACCCAGGCAGCACAGAGCCTCCTCCATGCATTCATTCTCACCGGACCATCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0007275 GO:0008150 GO:0009791 GO:0009908 GO:0009909 GO:0009911 GO:0016604 GO:0016607 GO:0022414 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045595 GO:0045596 GO:0048367 GO:0048437 GO:0048497 GO:0048518 GO:0048519 GO:0048523 GO:0048580 GO:0048582 GO:0048608 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051093 GO:0051094 GO:0051239 GO:0051240 GO:0061458 GO:0065007 GO:0070013 GO:0090567 GO:0090700 GO:0099402 GO:2000026 GO:2000241 GO:2000243

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

KH_1

Protein Analysis

629

Amino Acids

66.15

Weight (kDa)

8.78

Isoelectric Point (pI)

45.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
KH_1	PF00013	36 - 87	4e-12	KH domain
KH_1	PF00013	137 - 202	1.9e-13	KH domain
KH_1	PF00013	279 - 330	3.6e-11	KH domain
KH_1	PF00013	370 - 436	4.1e-14	KH domain
KH_1	PF00013	557 - 620	6.3e-14	KH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002957)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G64390 AT5G64390 AT5G64390
fragaria_vesca	FvH4_2g11560 FvH4_2g11560 FvH4_2g11560
malus_domestica	MD05G1048400.v1.1 MD10G1054800.v1.1
prunus_persica	Prupe.8G070900_v2.0.a1
pyrus_communis	pycom05g04000 pycom10g04180
rosa_chinensis	RchiOBHm_Chr1g0353311 RchiOBHm_Chr4g0385021 RchiOBHm_Chr6g0270731 RchiOBHm_Chr6g0272811
rosa_laevigata	RLG00000013774
rosa_multiflora	Rmu_co8284529.1_g000001 Rmu_sc0000642.1_g000012 Rmu_sc0041041.1_g000001
rosa_roxburghii	Rroxscaffold_2G00085770 Rroxscaffold_7G00197640
rosa_rugosa	Rorug06G0056000 Rorug06G0056100 Rorug06G0056200
rosa_samantha	Rh2DG204000 Rh4CG002400 Rh4CG168900 Rh6AG157400 Rh6AG175200 Rh6BG140200 Rh6BG178600 Rh6CG174800 Rh6DG123600 Rh6DG167400 Rh6DG180500 Rh7AG209600 Rh7CG359700
rosa_wichuraiana	Rw6G014930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	242
Acc36I	ACCTGC	1 cut(s)	424
AccB1I	GGYRCC	4 cut(s)	158, 887, 1724, 1757
AccBSI	CCGCTC	1 cut(s)	79
AccI	GTMKAC	2 cut(s)	1201, 1474
AccII	CGCG	2 cut(s)	61, 1111
AclWI	GGATC	8 cut(s)	33, 46, 800, 949, 1409, 1422, 1509, 1635
AcoI	YGGCCR	2 cut(s)	610, 948
AcuI	CTGAAG	2 cut(s)	741, 890
AcyI	GRCGYC	1 cut(s)	141
AfaI	GTAC	4 cut(s)	1195, 1260, 1301, 1712
AfiI	CCNNNNNNNGG	5 cut(s)	70, 418, 858, 897, 1787
AgsI	TTSAA	4 cut(s)	514, 620, 1067, 1281
AjiI	CACGTC	1 cut(s)	100
AjnI	CCWGG	4 cut(s)	53, 91, 1221, 1836
AjuI	GAANNNNNNNTTGG	2 cut(s)	1683, 1715
AloI	GAACNNNNNNTCC	2 cut(s)	1354, 1386
AluBI	AGCT	5 cut(s)	27, 175, 741, 1016, 1086
AluI	AGCT	5 cut(s)	27, 175, 741, 1016, 1086
Alw21I	GWGCWC	2 cut(s)	631, 1088
Alw26I	GTCTC	9 cut(s)	288, 365, 419, 482, 610, 665, 908, 1472, 1738
Alw44I	GTGCAC	1 cut(s)	627
AlwI	GGATC	8 cut(s)	33, 46, 800, 949, 1409, 1422, 1509, 1635
AlwNI	CAGNNNCTG	2 cut(s)	680, 1592
Ama87I	CYCGRG	1 cut(s)	1081
AoxI	GGCC	6 cut(s)	56, 94, 610, 662, 948, 1547
ApaLI	GTGCAC	1 cut(s)	627
ApeKI	GCWGC	5 cut(s)	67, 172, 536, 738, 1841
AseI	ATTAAT	1 cut(s)	968
AspLEI	GCGC	9 cut(s)	51, 63, 194, 266, 322, 331, 433, 1111, 1113
AspS9I	GGNCC	4 cut(s)	235, 273, 1225, 1877
AsuC2I	CCSGG	2 cut(s)	239, 1788
AsuHPI	GGTGA	6 cut(s)	457, 689, 1089, 1229, 1533, 1864
AvaI	CYCGRG	1 cut(s)	1081
AvaII	GGWCC	4 cut(s)	235, 273, 1225, 1877
BaeGI	GKGCMC	1 cut(s)	631
BamHI	GGATCC	2 cut(s)	38, 1414
BanI	GGYRCC	4 cut(s)	158, 887, 1724, 1757
BanII	GRGCYC	3 cut(s)	24, 904, 1088
BbsI	GAAGAC	3 cut(s)	608, 1030, 1411
Bbv12I	GWGCWC	2 cut(s)	631, 1088
BbvI	GCAGC	5 cut(s)	79, 184, 523, 750, 1853
BccI	CCATC	3 cut(s)	547, 781, 1558
BceAI	ACGGC	3 cut(s)	444, 597, 1361
BciT130I	CCWGG	4 cut(s)	55, 93, 1223, 1838
BcnI	CCSGG	2 cut(s)	239, 1788
BcoDI	GTCTC	9 cut(s)	288, 365, 419, 482, 610, 665, 908, 1472, 1738
BfmI	CTRYAG	2 cut(s)	1050, 1671
BfoI	RGCGCY	2 cut(s)	52, 332
BfuAI	ACCTGC	1 cut(s)	424
Bme1390I	CCNGG	6 cut(s)	55, 93, 239, 1223, 1788, 1838
Bme18I	GGWCC	4 cut(s)	235, 273, 1225, 1877
BmeT110I	CYCGRG	1 cut(s)	1081
BmgBI	CACGTC	1 cut(s)	100
BmgT120I	GGNCC	4 cut(s)	235, 273, 1225, 1877
BmiI	GGNNCC	9 cut(s)	40, 75, 160, 213, 889, 1227, 1416, 1726, 1759
BmrFI	CCNGG	6 cut(s)	55, 93, 239, 1223, 1788, 1838
BmrI	ACTGGG	1 cut(s)	501
BmsI	GCATC	4 cut(s)	141, 992, 1282, 1565
BmuI	ACTGGG	1 cut(s)	501
BpiI	GAAGAC	3 cut(s)	608, 1030, 1411
BpmI	CTGGAG	4 cut(s)	75, 161, 377, 803
BpuEI	CTTGAG	1 cut(s)	1027
BpuMI	CCSGG	2 cut(s)	239, 1788
BsaBI	GATNNNNATC	1 cut(s)	203
BsaHI	GRCGYC	1 cut(s)	141
BsaI	GGTCTC	3 cut(s)	288, 365, 1472
BsaJI	CCNNGG	7 cut(s)	53, 315, 1544, 1550, 1574, 1761, 1836
BsaWI	WCCGGW	4 cut(s)	270, 374, 1754, 1874
Bsc4I	CCNNNNNNNGG	5 cut(s)	70, 418, 858, 897, 1787
Bse118I	RCCGGY	2 cut(s)	188, 411
Bse1I	ACTGG	9 cut(s)	496, 632, 658, 922, 1195, 1201, 1315, 1392, 1597
Bse8I	GATNNNNATC	1 cut(s)	203
BseBI	CCWGG	4 cut(s)	55, 93, 1223, 1838
BseDI	CCNNGG	7 cut(s)	53, 315, 1544, 1550, 1574, 1761, 1836
BseGI	GGATG	3 cut(s)	14, 654, 1531
BseJI	GATNNNNATC	1 cut(s)	203
BseLI	CCNNNNNNNGG	5 cut(s)	70, 418, 858, 897, 1787
BseMII	CTCAG	6 cut(s)	729, 987, 1423, 1599, 1719, 1733
BseNI	ACTGG	9 cut(s)	496, 632, 658, 922, 1195, 1201, 1315, 1392, 1597
BsePI	GCGCGC	1 cut(s)	1109
BseRI	GAGGAG	2 cut(s)	224, 1844
BseSI	GKGCMC	1 cut(s)	631
BseX3I	CGGCCG	1 cut(s)	610
BseXI	GCAGC	5 cut(s)	79, 184, 523, 750, 1853
BseYI	CCCAGC	3 cut(s)	23, 260, 1147
Bsh1236I	CGCG	2 cut(s)	61, 1111
Bsh1285I	CGRYCG	2 cut(s)	613, 1474
BshFI	GGCC	6 cut(s)	58, 96, 612, 664, 950, 1549
BshNI	GGYRCC	4 cut(s)	158, 887, 1724, 1757
BsiEI	CGRYCG	2 cut(s)	613, 1474
BsiHKAI	GWGCWC	2 cut(s)	631, 1088
BsiHKCI	CYCGRG	1 cut(s)	1081
BslFI	GGGAC	5 cut(s)	985, 1106, 1211, 1770, 1834
BslI	CCNNNNNNNGG	5 cut(s)	70, 418, 858, 897, 1787
BsmAI	GTCTC	9 cut(s)	288, 365, 419, 482, 610, 665, 908, 1472, 1738
BsmBI	CGTCTC	1 cut(s)	419
BsmFI	GGGAC	5 cut(s)	985, 1106, 1211, 1770, 1834
BsmI	GAATGC	1 cut(s)	1862
BsnI	GGCC	6 cut(s)	58, 96, 612, 664, 950, 1549
Bso31I	GGTCTC	3 cut(s)	288, 365, 1472
BsoBI	CYCGRG	1 cut(s)	1081
Bsp1286I	GDGCHC	4 cut(s)	24, 631, 904, 1088
Bsp1407I	TGTACA	2 cut(s)	1258, 1299
Bsp19I	CCATGG	1 cut(s)	1550
BspANI	GGCC	6 cut(s)	58, 96, 612, 664, 950, 1549
BspCNI	CTCAG	6 cut(s)	728, 988, 1422, 1598, 1718, 1734
BspFNI	CGCG	2 cut(s)	61, 1111
BspHI	TCATGA	1 cut(s)	1883
BspLI	GGNNCC	9 cut(s)	40, 75, 160, 213, 889, 1227, 1416, 1726, 1759
BspMI	ACCTGC	1 cut(s)	424
BspPI	GGATC	8 cut(s)	33, 46, 800, 949, 1409, 1422, 1509, 1635
BspQI	GCTCTTC	1 cut(s)	909
BspT107I	GGYRCC	4 cut(s)	158, 887, 1724, 1757
BspTNI	GGTCTC	3 cut(s)	288, 365, 1472
BsrBI	CCGCTC	1 cut(s)	79
BsrFI	RCCGGY	2 cut(s)	188, 411
BsrGI	TGTACA	2 cut(s)	1258, 1299
BsrI	ACTGG	9 cut(s)	496, 632, 658, 922, 1195, 1201, 1315, 1392, 1597
BssAI	RCCGGY	2 cut(s)	188, 411
BssECI	CCNNGG	7 cut(s)	53, 315, 1544, 1550, 1574, 1761, 1836
BssHII	GCGCGC	1 cut(s)	1109
BssNAI	GTATAC	1 cut(s)	1202
BssNI	GRCGYC	1 cut(s)	141
BssT1I	CCWWGG	5 cut(s)	315, 1544, 1550, 1574, 1761
Bst1107I	GTATAC	1 cut(s)	1202
Bst2UI	CCWGG	4 cut(s)	55, 93, 1223, 1838
Bst4CI	ACNGT	6 cut(s)	85, 163, 676, 976, 1345, 1672
Bst6I	CTCTTC	1 cut(s)	909
BstACI	GRCGYC	1 cut(s)	141
BstAPI	GCANNNNNTGC	2 cut(s)	117, 599
BstAUI	TGTACA	2 cut(s)	1258, 1299
BstC8I	GCNNGC	7 cut(s)	65, 72, 113, 183, 1014, 1060, 1111
BstDEI	CTNAG	8 cut(s)	28, 715, 996, 1240, 1409, 1585, 1705, 1742
BstDSI	CCRYGG	1 cut(s)	1550
BstEII	GGTNACC	2 cut(s)	1095, 1217
BstF5I	GGATG	3 cut(s)	14, 654, 1531
BstFNI	CGCG	2 cut(s)	61, 1111
BstH2I	RGCGCY	2 cut(s)	52, 332
BstHHI	GCGC	9 cut(s)	51, 63, 194, 266, 322, 331, 433, 1111, 1113
BstMAI	GTCTC	9 cut(s)	288, 365, 419, 482, 610, 665, 908, 1472, 1738
BstMCI	CGRYCG	2 cut(s)	613, 1474
BstNI	CCWGG	4 cut(s)	55, 93, 1223, 1838
BstNSI	RCATGY	1 cut(s)	115
BstPI	GGTNACC	2 cut(s)	1095, 1217
BstSCI	CCNGG	6 cut(s)	53, 91, 237, 1221, 1786, 1836
BstSFI	CTRYAG	2 cut(s)	1050, 1671
BstSLI	GKGCMC	1 cut(s)	631
BstUI	CGCG	2 cut(s)	61, 1111
BstV1I	GCAGC	5 cut(s)	79, 184, 523, 750, 1853
BstV2I	GAAGAC	3 cut(s)	608, 1030, 1411
BstX2I	RGATCY	5 cut(s)	38, 792, 941, 1414, 1627
BstXI	CCANNNNNNTGG	2 cut(s)	283, 1551
BstYI	RGATCY	5 cut(s)	38, 792, 941, 1414, 1627
BstZ17I	GTATAC	1 cut(s)	1202
BstZI	CGGCCG	1 cut(s)	610
BsuRI	GGCC	6 cut(s)	58, 96, 612, 664, 950, 1549
BtgI	CCRYGG	1 cut(s)	1550
BtgZI	GCGATG	1 cut(s)	238
BtrI	CACGTC	1 cut(s)	100
BtsCI	GGATG	3 cut(s)	14, 654, 1531
BtsI	GCAGTG	1 cut(s)	1642
BtsIMutI	CAGTG	5 cut(s)	81, 295, 723, 1642, 1713
BveI	ACCTGC	1 cut(s)	424
Cac8I	GCNNGC	7 cut(s)	65, 72, 113, 183, 1014, 1060, 1111
CaiI	CAGNNNCTG	2 cut(s)	680, 1592
CciI	TCATGA	1 cut(s)	1883
CfoI	GCGC	9 cut(s)	51, 63, 194, 266, 322, 331, 433, 1111, 1113
Cfr10I	RCCGGY	2 cut(s)	188, 411
Cfr13I	GGNCC	4 cut(s)	235, 273, 1225, 1877
CpoI	CGGWCCG	1 cut(s)	235
CseI	GACGC	1 cut(s)	130
CsiI	ACCWGGT	1 cut(s)	1221
Csp6I	GTAC	4 cut(s)	1194, 1259, 1300, 1711
CspI	CGGWCCG	1 cut(s)	235
CviAII	CATG	7 cut(s)	112, 745, 1463, 1551, 1775, 1859, 1884
CviQI	GTAC	4 cut(s)	1194, 1259, 1300, 1711
DdeI	CTNAG	8 cut(s)	28, 715, 996, 1240, 1409, 1585, 1705, 1742
DrdI	GACNNNNNNGTC	1 cut(s)	242
DseDI	GACNNNNNNGTC	1 cut(s)	242
EaeI	YGGCCR	2 cut(s)	610, 948
EagI	CGGCCG	1 cut(s)	610
Eam1104I	CTCTTC	1 cut(s)	909
EarI	CTCTTC	1 cut(s)	909
EciI	GGCGGA	3 cut(s)	383, 437, 759
Ecl136II	GAGCTC	1 cut(s)	1086
EclXI	CGGCCG	1 cut(s)	610
Eco130I	CCWWGG	5 cut(s)	315, 1544, 1550, 1574, 1761
Eco147I	AGGCCT	1 cut(s)	664
Eco24I	GRGCYC	3 cut(s)	24, 904, 1088
Eco31I	GGTCTC	3 cut(s)	288, 365, 1472
Eco47I	GGWCC	4 cut(s)	235, 273, 1225, 1877
Eco52I	CGGCCG	1 cut(s)	610
Eco53kI	GAGCTC	1 cut(s)	1086
Eco57I	CTGAAG	2 cut(s)	741, 890
Eco88I	CYCGRG	1 cut(s)	1081
Eco91I	GGTNACC	2 cut(s)	1095, 1217
EcoICRI	GAGCTC	1 cut(s)	1086
EcoO109I	RGGNCCY	1 cut(s)	1225
EcoO65I	GGTNACC	2 cut(s)	1095, 1217
EcoRII	CCWGG	4 cut(s)	53, 91, 1221, 1836
EcoT14I	CCWWGG	5 cut(s)	315, 1544, 1550, 1574, 1761
EcoT22I	ATGCAT	1 cut(s)	1864
EcoT38I	GRGCYC	3 cut(s)	24, 904, 1088
ErhI	CCWWGG	5 cut(s)	315, 1544, 1550, 1574, 1761
Esp3I	CGTCTC	1 cut(s)	419
FaeI	CATG	7 cut(s)	115, 748, 1466, 1554, 1778, 1862, 1887
FalI	AAGNNNNNCTT	4 cut(s)	315, 347, 1223, 1255
FaqI	GGGAC	5 cut(s)	985, 1106, 1211, 1770, 1834
FatI	CATG	7 cut(s)	111, 744, 1462, 1550, 1774, 1858, 1883
FauI	CCCGC	3 cut(s)	137, 1010, 1051
FblI	GTMKAC	2 cut(s)	1201, 1474
FokI	GGATG	2 cut(s)	661, 1518
FriOI	GRGCYC	3 cut(s)	24, 904, 1088
GlaI	GCGC	9 cut(s)	50, 62, 193, 265, 321, 330, 432, 1110, 1112
GsaI	CCCAGC	3 cut(s)	27, 264, 1151
GsuI	CTGGAG	4 cut(s)	75, 161, 377, 803
HaeII	RGCGCY	2 cut(s)	52, 332
HaeIII	GGCC	6 cut(s)	58, 96, 612, 664, 950, 1549
HgaI	GACGC	1 cut(s)	130
HhaI	GCGC	9 cut(s)	51, 63, 194, 266, 322, 331, 433, 1111, 1113
Hin1I	GRCGYC	1 cut(s)	141
Hin1II	CATG	7 cut(s)	115, 748, 1466, 1554, 1778, 1862, 1887
Hin6I	GCGC	9 cut(s)	49, 61, 192, 264, 320, 329, 431, 1109, 1111
HinP1I	GCGC	9 cut(s)	49, 61, 192, 264, 320, 329, 431, 1109, 1111
HincII	GTYRAC	2 cut(s)	637, 1475
HindII	GTYRAC	2 cut(s)	637, 1475
HinfI	GANTC	9 cut(s)	204, 227, 352, 991, 998, 1079, 1177, 1407, 1581
HphI	GGTGA	6 cut(s)	457, 689, 1089, 1229, 1533, 1864
Hpy166II	GTNNAC	5 cut(s)	629, 637, 1202, 1475, 1711
Hpy8I	GTNNAC	5 cut(s)	629, 637, 1202, 1475, 1711
Hpy99I	CGWCG	3 cut(s)	104, 248, 251
HpyAV	CCTTC	7 cut(s)	115, 552, 560, 1177, 1353, 1449, 1545
HpyCH4III	ACNGT	6 cut(s)	85, 163, 676, 976, 1345, 1672
HpyCH4IV	ACGT	1 cut(s)	99
HpyCH4V	TGCA	5 cut(s)	629, 983, 1288, 1774, 1862
HpyF3I	CTNAG	8 cut(s)	28, 715, 996, 1240, 1409, 1585, 1705, 1742
HpySE526I	ACGT	1 cut(s)	99
Hsp92I	GRCGYC	1 cut(s)	141
Hsp92II	CATG	7 cut(s)	115, 748, 1466, 1554, 1778, 1862, 1887
HspAI	GCGC	9 cut(s)	49, 61, 192, 264, 320, 329, 431, 1109, 1111
LguI	GCTCTTC	1 cut(s)	909
Lsp1109I	GCAGC	5 cut(s)	79, 184, 523, 750, 1853
LweI	GCATC	4 cut(s)	141, 992, 1282, 1565
MabI	ACCWGGT	1 cut(s)	1221
MaeII	ACGT	1 cut(s)	99
MaeIII	GTNAC	7 cut(s)	829, 976, 1095, 1186, 1217, 1456, 1657
MbiI	CCGCTC	1 cut(s)	79
MboII	GAAGA	7 cut(s)	487, 608, 896, 1030, 1416, 1434, 1530
MflI	RGATCY	5 cut(s)	38, 792, 941, 1414, 1627
MhlI	GDGCHC	4 cut(s)	24, 631, 904, 1088
MluCI	AATT	7 cut(s)	501, 521, 727, 969, 1351, 1522, 1729
MlyI	GAGTC	4 cut(s)	221, 1007, 1073, 1401
MmeI	TCCRAC	3 cut(s)	376, 916, 1362
Mph1103I	ATGCAT	1 cut(s)	1864
MseI	TTAA	2 cut(s)	837, 968
MspR9I	CCNGG	6 cut(s)	55, 93, 239, 1223, 1788, 1838
Mva1269I	GAATGC	1 cut(s)	1862
MvaI	CCWGG	4 cut(s)	55, 93, 1223, 1838
MvnI	CGCG	2 cut(s)	61, 1111
NciI	CCSGG	2 cut(s)	239, 1788
NcoI	CCATGG	1 cut(s)	1550
NlaIII	CATG	7 cut(s)	115, 748, 1466, 1554, 1778, 1862, 1887
NlaIV	GGNNCC	9 cut(s)	40, 75, 160, 213, 889, 1227, 1416, 1726, 1759
NmeAIII	GCCGAG	2 cut(s)	759, 976
NmuCI	GTSAC	3 cut(s)	1095, 1217, 1657
NsiI	ATGCAT	1 cut(s)	1864
NspI	RCATGY	1 cut(s)	115
PaeI	GCATGC	1 cut(s)	115
PaeR7I	CTCGAG	1 cut(s)	1081
PagI	TCATGA	1 cut(s)	1883
PauI	GCGCGC	1 cut(s)	1109
PceI	AGGCCT	1 cut(s)	664
PciSI	GCTCTTC	1 cut(s)	909
PctI	GAATGC	1 cut(s)	1862
PfeI	GAWTC	5 cut(s)	204, 352, 991, 1177, 1581
PflFI	GACNNNGTC	2 cut(s)	239, 1223
PfoI	TCCNGGA	1 cut(s)	1786
PleI	GAGTC	4 cut(s)	221, 1006, 1073, 1401
PpsI	GAGTC	4 cut(s)	221, 1006, 1073, 1401
PpuMI	RGGWCCY	1 cut(s)	1225
PshBI	ATTAAT	1 cut(s)	968
Psp124BI	GAGCTC	1 cut(s)	1088
Psp5II	RGGWCCY	1 cut(s)	1225
Psp6I	CCWGG	4 cut(s)	53, 91, 1221, 1836
PspEI	GGTNACC	2 cut(s)	1095, 1217
PspFI	CCCAGC	3 cut(s)	23, 260, 1147
PspGI	CCWGG	4 cut(s)	53, 91, 1221, 1836
PspN4I	GGNNCC	9 cut(s)	40, 75, 160, 213, 889, 1227, 1416, 1726, 1759
PspPI	GGNCC	4 cut(s)	235, 273, 1225, 1877
PspPPI	RGGWCCY	1 cut(s)	1225
PspXI	VCTCGAGB	1 cut(s)	1081
PstNI	CAGNNNCTG	2 cut(s)	680, 1592
PsuI	RGATCY	5 cut(s)	38, 792, 941, 1414, 1627
PsyI	GACNNNGTC	2 cut(s)	239, 1223
PteI	GCGCGC	1 cut(s)	1109
RsaI	GTAC	4 cut(s)	1195, 1260, 1301, 1712
RsaNI	GTAC	4 cut(s)	1194, 1259, 1300, 1711
Rsr2I	CGGWCCG	1 cut(s)	235
RsrII	CGGWCCG	1 cut(s)	235
SacI	GAGCTC	1 cut(s)	1088
SalI	GTCGAC	1 cut(s)	1473
SapI	GCTCTTC	1 cut(s)	909
SaqAI	TTAA	2 cut(s)	837, 968
Sau96I	GGNCC	4 cut(s)	235, 273, 1225, 1877
SchI	GAGTC	4 cut(s)	221, 1007, 1073, 1401
ScrFI	CCNGG	6 cut(s)	55, 93, 239, 1223, 1788, 1838
SduI	GDGCHC	4 cut(s)	24, 631, 904, 1088
SexAI	ACCWGGT	1 cut(s)	1221
SfaNI	GCATC	4 cut(s)	141, 992, 1282, 1565
SfcI	CTRYAG	2 cut(s)	1050, 1671
Sfr274I	CTCGAG	1 cut(s)	1081
SinI	GGWCC	4 cut(s)	235, 273, 1225, 1877
SlaI	CTCGAG	1 cut(s)	1081
SmlI	CTYRAG	2 cut(s)	1042, 1081
SmoI	CTYRAG	2 cut(s)	1042, 1081
SphI	GCATGC	1 cut(s)	115
Sse9I	AATT	7 cut(s)	501, 521, 727, 969, 1351, 1522, 1729
SseBI	AGGCCT	1 cut(s)	664
SspI	AATATT	2 cut(s)	841, 1306
SstI	GAGCTC	1 cut(s)	1088
StuI	AGGCCT	1 cut(s)	664
StyD4I	CCNGG	6 cut(s)	53, 91, 237, 1221, 1786, 1836
StyI	CCWWGG	5 cut(s)	315, 1544, 1550, 1574, 1761
TaaI	ACNGT	6 cut(s)	85, 163, 676, 976, 1345, 1672
TaiI	ACGT	1 cut(s)	102
TaqI	TCGA	6 cut(s)	207, 225, 345, 1082, 1474, 1738
TaqII	GACCGA	1 cut(s)	1460
TasI	AATT	7 cut(s)	501, 521, 727, 969, 1351, 1522, 1729
TatI	WGTACW	2 cut(s)	1258, 1299
TauI	GCSGC	5 cut(s)	61, 141, 217, 368, 462
TfiI	GAWTC	5 cut(s)	204, 352, 991, 1177, 1581
Tru1I	TTAA	2 cut(s)	837, 968
Tru9I	TTAA	2 cut(s)	837, 968
TscAI	CASTG	5 cut(s)	88, 295, 723, 1642, 1713
TseFI	GTSAC	3 cut(s)	1095, 1217, 1657
TseI	GCWGC	5 cut(s)	67, 172, 536, 738, 1841
Tsp45I	GTSAC	3 cut(s)	1095, 1217, 1657
TspDTI	ATGAA	4 cut(s)	975, 1434, 1791, 1855
TspGWI	ACGGA	3 cut(s)	51, 1219, 1728
TspRI	CASTG	5 cut(s)	88, 295, 723, 1642, 1713
Tth111I	GACNNNGTC	2 cut(s)	239, 1223
VneI	GTGCAC	1 cut(s)	627
VpaK11BI	GGWCC	4 cut(s)	235, 273, 1225, 1877
VspI	ATTAAT	1 cut(s)	968
XceI	RCATGY	1 cut(s)	115
XhoI	CTCGAG	1 cut(s)	1081
XmiI	GTMKAC	2 cut(s)	1201, 1474
Zsp2I	ATGCAT	1 cut(s)	1864

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.