Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000642.1

Orthogroup ID

OG0002957

Physical Location & Seq

Genomic Coordinates Reverse (-)

95698 .. 99947

Gene Structure 4250 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000642.1_g000012.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1902 bp

atgtcctcctcttcctccgagcccagcttagaaaacggatcctccaagcgctccaggtcgcgccagcagcaggctccgctcactgttcctccaggccacatcgccttccgcatgctctgccacgcctcccgcatcggcggcgtcatcggcaagtccggcaccgtcatcaagcagctccagcaggccaccggcgcaaagatcagaatcgaggagccgccccaactcgactcgccggaccgggtcgtcgtcgtcattgctcccagcgcaatccggtccaagattgtgctcagtggagaccaagagattgaggtttccaaggcgcaagaggcgcttgtgagagtgttcgagaggattctagaggtggcggcggagaccggagcgataggagtaggggttggagtggtgtcttgccggtttctggcggagacggcgcaggtcggctcggtgataggcaagggcggcaaggtggtggagaagattagaaaagagactggctgtaaaattagggtcttgaatgagaaattgcccgtttgtgctggtccttctgacgagatggtagagatagaaggggatattttggctgtaaagaaagcacttgttgctgtctccggccgtcttcaagattgtccaccagttgacaagacaaggatgactggaagtaggcctattgagaccgttcctcgtgaaactttacctgatattcgtgtagatcacctttcacagaggaactcagtgatttccaatttgccgagcagctccttgagttatgcttcaggagttcgtccgccatcaatagaggctgaaaggatctcaacactggatacaagaacactccagcaggaagttacttttaagattctttgcgccaatgatagggttgggggtgtcattggaaaagggggtgccattgtcagggctcttcagaatgagactggtgctactataagtgttggaggatctgtggccgagtgtgatgaaagattaattactgttactgcatcagagaatcctgagtcccgctactcgccagcacaaaagggtcttgttcttgtcttctcaaggtctgtagaggcaggcattgaaaaggggcaagacttgagctccaaagggtcacctcttagtgcacgccttgttgtcccgacaagccaagttggttgtttgctgggaaaagggggtgtaatagtttcagagattcggaaggtaactggtaccagtatacggataataggtggtgaccaggtcccgaagtgtgccttagagaatgatgaagttgtacaggtttcaggaaatttttcaagtgtgcaagatgctttgtacaatattactggtaggttacgagataaccttttctccaacacagtaaataattctggaaggaggaatacttcagctgtgctaacagataccagtccttatggaagactcagggatcctgctcctactggatttcagccttcttcatcagttggtgttactcatggtctcggtcgacataccactctaactcaaagtatggatcatcttggactttcccataatttagatcatccttcttcaccaaggccatgggcatcacagatggttgctccaaggggaatctcagatactggcaggggtttgacttctcttcaaagtggctcggatcttggcagtggaagcaaatctgccattgtgacaaatacaactgtagagatcatagttcctgaaaatgttattagctcagtgtacggagagaatggcaccaatttggctcgactgagacagatttccggtgccaaggtcatagtgcatgaaccccgtcccggaacaactgataggattattgtcatatctgggacacctgacgaaacccaggcagcacagagcctcctccacgcattcattctcaccggtccatcatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0007275 GO:0008150 GO:0009791 GO:0009908 GO:0009909 GO:0009911 GO:0016604 GO:0016607 GO:0022414 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045595 GO:0045596 GO:0048367 GO:0048437 GO:0048497 GO:0048518 GO:0048519 GO:0048523 GO:0048580 GO:0048582 GO:0048608 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051093 GO:0051094 GO:0051239 GO:0051240 GO:0061458 GO:0065007 GO:0070013 GO:0090567 GO:0090700 GO:0099402 GO:2000026 GO:2000241 GO:2000243

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

KH_1

Protein Analysis

633

Amino Acids

66.75

Weight (kDa)

8.88

Isoelectric Point (pI)

46.96

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002957)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G64390 AT5G64390 AT5G64390
fragaria_vesca	FvH4_2g11560 FvH4_2g11560 FvH4_2g11560
malus_domestica	MD05G1048400.v1.1 MD10G1054800.v1.1
prunus_persica	Prupe.8G070900_v2.0.a1
pyrus_communis	pycom05g04000 pycom10g04180
rosa_chinensis	RchiOBHm_Chr1g0353311 RchiOBHm_Chr4g0385021 RchiOBHm_Chr6g0270731 RchiOBHm_Chr6g0272811
rosa_laevigata	RLG00000013774
rosa_multiflora	Rmu_co8284529.1_g000001 Rmu_sc0000642.1_g000012 Rmu_sc0041041.1_g000001
rosa_roxburghii	Rroxscaffold_2G00085770 Rroxscaffold_7G00197640
rosa_rugosa	Rorug06G0056000 Rorug06G0056100 Rorug06G0056200
rosa_samantha	Rh2DG204000 Rh4CG002400 Rh4CG168900 Rh6AG157400 Rh6AG175200 Rh6BG140200 Rh6BG178600 Rh6CG174800 Rh6DG123600 Rh6DG167400 Rh6DG180500 Rh7AG209600 Rh7CG359700
rosa_wichuraiana	Rw6G014930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	242
Acc36I	ACCTGC	1 cut(s)	424
Acc65I	GGTACC	1 cut(s)	1208
AccB1I	GGYRCC	5 cut(s)	158, 902, 1208, 1739, 1772
AccBSI	CCGCTC	1 cut(s)	79
AccI	GTMKAC	2 cut(s)	1216, 1489
AccII	CGCG	1 cut(s)	61
AclWI	GGATC	8 cut(s)	33, 46, 815, 964, 1424, 1437, 1524, 1650
AcoI	YGGCCR	2 cut(s)	610, 963
AcsI	RAATTY	1 cut(s)	1288
AcuI	CTGAAG	3 cut(s)	756, 905, 1371
AcyI	GRCGYC	1 cut(s)	141
AfaI	GTAC	4 cut(s)	1210, 1275, 1316, 1727
AfeI	AGCGCT	1 cut(s)	50
AfiI	CCNNNNNNNGG	6 cut(s)	70, 418, 873, 912, 1218, 1802
AgeI	ACCGGT	1 cut(s)	1889
AgsI	TTSAA	5 cut(s)	514, 620, 1082, 1296, 1631
AjnI	CCWGG	4 cut(s)	53, 91, 1236, 1851
AluBI	AGCT	6 cut(s)	27, 175, 756, 1101, 1391, 1719
AluI	AGCT	6 cut(s)	27, 175, 756, 1101, 1391, 1719
Alw21I	GWGCWC	3 cut(s)	288, 1103, 1126
Alw26I	GTCTC	9 cut(s)	288, 365, 419, 482, 610, 665, 923, 1487, 1753
Alw44I	GTGCAC	1 cut(s)	1122
AlwI	GGATC	8 cut(s)	33, 46, 815, 964, 1424, 1437, 1524, 1650
AlwNI	CAGNNNCTG	1 cut(s)	1607
Aor51HI	AGCGCT	1 cut(s)	50
AoxI	GGCC	6 cut(s)	94, 183, 610, 662, 963, 1562
ApaLI	GTGCAC	1 cut(s)	1122
ApeKI	GCWGC	4 cut(s)	67, 172, 753, 1856
ApoI	RAATTY	1 cut(s)	1288
AseI	ATTAAT	1 cut(s)	983
AsiGI	ACCGGT	1 cut(s)	1889
Asp700I	GAANNNNTTC	1 cut(s)	1291
Asp718I	GGTACC	1 cut(s)	1208
AspLEI	GCGC	8 cut(s)	51, 63, 194, 266, 322, 331, 433, 866
AspS9I	GGNCC	5 cut(s)	235, 273, 539, 1240, 1892
AsuC2I	CCSGG	2 cut(s)	239, 1803
AsuHPI	GGTGA	6 cut(s)	457, 704, 1104, 1244, 1548, 1879
AvaII	GGWCC	5 cut(s)	235, 273, 539, 1240, 1892
BaeGI	GKGCMC	1 cut(s)	1126
BamHI	GGATCC	2 cut(s)	38, 1429
BanI	GGYRCC	5 cut(s)	158, 902, 1208, 1739, 1772
BanII	GRGCYC	3 cut(s)	24, 919, 1103
BarI	GAAGNNNNNNTAC	2 cut(s)	1366, 1398
BauI	CACGAG	1 cut(s)	681
BbsI	GAAGAC	3 cut(s)	608, 1045, 1426
Bbv12I	GWGCWC	3 cut(s)	288, 1103, 1126
BbvI	GCAGC	4 cut(s)	79, 184, 765, 1868
BccI	CCATC	3 cut(s)	547, 796, 1573
BceAI	ACGGC	2 cut(s)	444, 597
BciT130I	CCWGG	4 cut(s)	55, 93, 1238, 1853
BciVI	GTATCC	1 cut(s)	814
BcnI	CCSGG	2 cut(s)	239, 1803
BcoDI	GTCTC	9 cut(s)	288, 365, 419, 482, 610, 665, 923, 1487, 1753
BfaI	CTAG	1 cut(s)	356
BfmI	CTRYAG	2 cut(s)	1065, 1686
BfoI	RGCGCY	2 cut(s)	52, 332
BfuAI	ACCTGC	1 cut(s)	424
BfuI	GTATCC	1 cut(s)	814
BisI	GCNGC	8 cut(s)	68, 139, 173, 215, 366, 460, 754, 1857
BlsI	GCNGC	8 cut(s)	69, 140, 174, 216, 367, 461, 755, 1858
Bme1390I	CCNGG	6 cut(s)	55, 93, 239, 1238, 1803, 1853
Bme18I	GGWCC	5 cut(s)	235, 273, 539, 1240, 1892
BmgT120I	GGNCC	5 cut(s)	235, 273, 539, 1240, 1892
BmrFI	CCNGG	6 cut(s)	55, 93, 239, 1238, 1803, 1853
BmsI	GCATC	4 cut(s)	141, 1007, 1297, 1580
BpiI	GAAGAC	3 cut(s)	608, 1045, 1426
BpmI	CTGGAG	4 cut(s)	37, 75, 161, 818
BpuEI	CTTGAG	3 cut(s)	781, 1042, 1117
BpuMI	CCSGG	2 cut(s)	239, 1803
BsaBI	GATNNNNATC	1 cut(s)	203
BsaHI	GRCGYC	1 cut(s)	141
BsaI	GGTCTC	4 cut(s)	288, 365, 665, 1487
BsaJI	CCNNGG	6 cut(s)	315, 1559, 1565, 1589, 1776, 1851
BsaWI	WCCGGW	4 cut(s)	270, 374, 1769, 1889
Bsc4I	CCNNNNNNNGG	6 cut(s)	70, 418, 873, 912, 1218, 1802
Bse118I	RCCGGY	3 cut(s)	188, 411, 1889
Bse3DI	GCAATG	1 cut(s)	252
Bse8I	GATNNNNATC	1 cut(s)	203
BseBI	CCWGG	4 cut(s)	55, 93, 1238, 1853
BseDI	CCNNGG	6 cut(s)	315, 1559, 1565, 1589, 1776, 1851
BseGI	GGATG	2 cut(s)	654, 1546
BseJI	GATNNNNATC	1 cut(s)	203
BseLI	CCNNNNNNNGG	6 cut(s)	70, 418, 873, 912, 1218, 1802
BseMI	GCAATG	1 cut(s)	252
BseMII	CTCAG	7 cut(s)	301, 744, 1002, 1438, 1614, 1734, 1748
BseRI	GAGGAG	2 cut(s)	224, 1859
BseSI	GKGCMC	1 cut(s)	1126
BseX3I	CGGCCG	1 cut(s)	610
BseXI	GCAGC	4 cut(s)	79, 184, 765, 1868
BseYI	CCCAGC	3 cut(s)	23, 260, 1162
Bsh1236I	CGCG	1 cut(s)	61
Bsh1285I	CGRYCG	2 cut(s)	613, 1489
BshFI	GGCC	6 cut(s)	96, 185, 612, 664, 965, 1564
BshNI	GGYRCC	5 cut(s)	158, 902, 1208, 1739, 1772
BshTI	ACCGGT	1 cut(s)	1889
BsiEI	CGRYCG	2 cut(s)	613, 1489
BsiHKAI	GWGCWC	3 cut(s)	288, 1103, 1126
BslFI	GGGAC	5 cut(s)	1000, 1121, 1226, 1785, 1849
BslI	CCNNNNNNNGG	6 cut(s)	70, 418, 873, 912, 1218, 1802
BsmAI	GTCTC	9 cut(s)	288, 365, 419, 482, 610, 665, 923, 1487, 1753
BsmBI	CGTCTC	1 cut(s)	419
BsmFI	GGGAC	5 cut(s)	1000, 1121, 1226, 1785, 1849
BsmI	GAATGC	1 cut(s)	1877
BsnI	GGCC	6 cut(s)	96, 185, 612, 664, 965, 1564
Bso31I	GGTCTC	4 cut(s)	288, 365, 665, 1487
Bsp1286I	GDGCHC	5 cut(s)	24, 288, 919, 1103, 1126
Bsp1407I	TGTACA	2 cut(s)	1273, 1314
Bsp19I	CCATGG	1 cut(s)	1565
BspANI	GGCC	6 cut(s)	96, 185, 612, 664, 965, 1564
BspCNI	CTCAG	7 cut(s)	300, 743, 1003, 1437, 1613, 1733, 1749
BspFNI	CGCG	1 cut(s)	61
BspHI	TCATGA	1 cut(s)	1898
BspMI	ACCTGC	1 cut(s)	424
BspPI	GGATC	8 cut(s)	33, 46, 815, 964, 1424, 1437, 1524, 1650
BspQI	GCTCTTC	1 cut(s)	924
BspT107I	GGYRCC	5 cut(s)	158, 902, 1208, 1739, 1772
BspTNI	GGTCTC	4 cut(s)	288, 365, 665, 1487
BsrBI	CCGCTC	1 cut(s)	79
BsrDI	GCAATG	1 cut(s)	252
BsrFI	RCCGGY	3 cut(s)	188, 411, 1889
BsrGI	TGTACA	2 cut(s)	1273, 1314
BssAI	RCCGGY	3 cut(s)	188, 411, 1889
BssECI	CCNNGG	6 cut(s)	315, 1559, 1565, 1589, 1776, 1851
BssNAI	GTATAC	1 cut(s)	1217
BssNI	GRCGYC	1 cut(s)	141
BssSI	CACGAG	1 cut(s)	681
BssT1I	CCWWGG	5 cut(s)	315, 1559, 1565, 1589, 1776
Bst1107I	GTATAC	1 cut(s)	1217
Bst2BI	CACGAG	1 cut(s)	681
Bst2UI	CCWGG	4 cut(s)	55, 93, 1238, 1853
Bst4CI	ACNGT	6 cut(s)	85, 163, 676, 991, 1360, 1687
Bst6I	CTCTTC	3 cut(s)	16, 924, 1632
BstACI	GRCGYC	1 cut(s)	141
BstAPI	GCANNNNNTGC	2 cut(s)	117, 599
BstAUI	TGTACA	2 cut(s)	1273, 1314
BstC8I	GCNNGC	7 cut(s)	65, 72, 113, 183, 1029, 1075, 1126
BstDSI	CCRYGG	1 cut(s)	1565
BstEII	GGTNACC	2 cut(s)	1110, 1232
BstF5I	GGATG	2 cut(s)	654, 1546
BstFNI	CGCG	1 cut(s)	61
BstH2I	RGCGCY	2 cut(s)	52, 332
BstHHI	GCGC	8 cut(s)	51, 63, 194, 266, 322, 331, 433, 866
BstMAI	GTCTC	9 cut(s)	288, 365, 419, 482, 610, 665, 923, 1487, 1753
BstMCI	CGRYCG	2 cut(s)	613, 1489
BstNI	CCWGG	4 cut(s)	55, 93, 1238, 1853
BstNSI	RCATGY	1 cut(s)	115
BstPI	GGTNACC	2 cut(s)	1110, 1232
BstSCI	CCNGG	6 cut(s)	53, 91, 237, 1236, 1801, 1851
BstSFI	CTRYAG	2 cut(s)	1065, 1686
BstSLI	GKGCMC	1 cut(s)	1126
BstUI	CGCG	1 cut(s)	61
BstV1I	GCAGC	4 cut(s)	79, 184, 765, 1868
BstV2I	GAAGAC	3 cut(s)	608, 1045, 1426
BstX2I	RGATCY	5 cut(s)	38, 807, 956, 1429, 1642
BstXI	CCANNNNNNTGG	1 cut(s)	1566
BstYI	RGATCY	5 cut(s)	38, 807, 956, 1429, 1642
BstZ17I	GTATAC	1 cut(s)	1217
BstZI	CGGCCG	1 cut(s)	610
BsuI	GTATCC	1 cut(s)	814
BsuRI	GGCC	6 cut(s)	96, 185, 612, 664, 965, 1564
BtgI	CCRYGG	1 cut(s)	1565
BtgZI	GCGATG	1 cut(s)	85
BtsCI	GGATG	2 cut(s)	654, 1546
BtsI	GCAGTG	1 cut(s)	1657
BtsIMutI	CAGTG	6 cut(s)	81, 295, 738, 815, 1657, 1728
BveI	ACCTGC	1 cut(s)	424
Cac8I	GCNNGC	7 cut(s)	65, 72, 113, 183, 1029, 1075, 1126
CaiI	CAGNNNCTG	1 cut(s)	1607
CciI	TCATGA	1 cut(s)	1898
CfoI	GCGC	8 cut(s)	51, 63, 194, 266, 322, 331, 433, 866
Cfr10I	RCCGGY	3 cut(s)	188, 411, 1889
Cfr13I	GGNCC	5 cut(s)	235, 273, 539, 1240, 1892
CpoI	CGGWCCG	1 cut(s)	235
CseI	GACGC	1 cut(s)	130
CsiI	ACCWGGT	1 cut(s)	1236
Csp6I	GTAC	4 cut(s)	1209, 1274, 1315, 1726
CspAI	ACCGGT	1 cut(s)	1889
CspI	CGGWCCG	1 cut(s)	235
CviAII	CATG	5 cut(s)	112, 1478, 1566, 1790, 1899
CviQI	GTAC	4 cut(s)	1209, 1274, 1315, 1726
DrdI	GACNNNNNNGTC	1 cut(s)	242
DseDI	GACNNNNNNGTC	1 cut(s)	242
EaeI	YGGCCR	2 cut(s)	610, 963
EagI	CGGCCG	1 cut(s)	610
Eam1104I	CTCTTC	3 cut(s)	16, 924, 1632
EarI	CTCTTC	3 cut(s)	16, 924, 1632
EciI	GGCGGA	3 cut(s)	383, 437, 774
Ecl136II	GAGCTC	1 cut(s)	1101
EclXI	CGGCCG	1 cut(s)	610
Eco130I	CCWWGG	5 cut(s)	315, 1559, 1565, 1589, 1776
Eco147I	AGGCCT	1 cut(s)	664
Eco24I	GRGCYC	3 cut(s)	24, 919, 1103
Eco31I	GGTCTC	4 cut(s)	288, 365, 665, 1487
Eco47I	GGWCC	5 cut(s)	235, 273, 539, 1240, 1892
Eco47III	AGCGCT	1 cut(s)	50
Eco52I	CGGCCG	1 cut(s)	610
Eco53kI	GAGCTC	1 cut(s)	1101
Eco57I	CTGAAG	3 cut(s)	756, 905, 1371
Eco91I	GGTNACC	2 cut(s)	1110, 1232
EcoICRI	GAGCTC	1 cut(s)	1101
EcoO109I	RGGNCCY	1 cut(s)	1240
EcoO65I	GGTNACC	2 cut(s)	1110, 1232
EcoRII	CCWGG	4 cut(s)	53, 91, 1236, 1851
EcoT14I	CCWWGG	5 cut(s)	315, 1559, 1565, 1589, 1776
EcoT38I	GRGCYC	3 cut(s)	24, 919, 1103
ErhI	CCWWGG	5 cut(s)	315, 1559, 1565, 1589, 1776
Esp3I	CGTCTC	1 cut(s)	419
FaeI	CATG	5 cut(s)	115, 1481, 1569, 1793, 1902
FalI	AAGNNNNNCTT	4 cut(s)	315, 347, 1238, 1270
FaqI	GGGAC	5 cut(s)	1000, 1121, 1226, 1785, 1849
FatI	CATG	5 cut(s)	111, 1477, 1565, 1789, 1898
FauI	CCCGC	2 cut(s)	137, 1025
FblI	GTMKAC	2 cut(s)	1216, 1489
Fnu4HI	GCNGC	8 cut(s)	68, 139, 173, 215, 366, 460, 754, 1857
FokI	GGATG	2 cut(s)	661, 1533
FriOI	GRGCYC	3 cut(s)	24, 919, 1103
Fsp4HI	GCNGC	8 cut(s)	68, 139, 173, 215, 366, 460, 754, 1857
FspBI	CTAG	1 cut(s)	356
GlaI	GCGC	8 cut(s)	50, 62, 193, 265, 321, 330, 432, 865
GluI	GCNGC	8 cut(s)	68, 139, 173, 215, 366, 460, 754, 1857
GsaI	CCCAGC	3 cut(s)	27, 264, 1166
GsuI	CTGGAG	4 cut(s)	37, 75, 161, 818
HaeII	RGCGCY	2 cut(s)	52, 332
HaeIII	GGCC	6 cut(s)	96, 185, 612, 664, 965, 1564
HgaI	GACGC	1 cut(s)	130
HhaI	GCGC	8 cut(s)	51, 63, 194, 266, 322, 331, 433, 866
Hin1I	GRCGYC	1 cut(s)	141
Hin1II	CATG	5 cut(s)	115, 1481, 1569, 1793, 1902
Hin6I	GCGC	8 cut(s)	49, 61, 192, 264, 320, 329, 431, 864
HinP1I	GCGC	8 cut(s)	49, 61, 192, 264, 320, 329, 431, 864
HincII	GTYRAC	2 cut(s)	637, 1490
HindII	GTYRAC	2 cut(s)	637, 1490
HinfI	GANTC	9 cut(s)	204, 227, 352, 856, 1006, 1013, 1192, 1422, 1596
HphI	GGTGA	6 cut(s)	457, 704, 1104, 1244, 1548, 1879
Hpy166II	GTNNAC	6 cut(s)	629, 637, 1124, 1217, 1490, 1726
Hpy188I	TCNGA	9 cut(s)	19, 203, 547, 924, 1003, 1189, 1197, 1603, 1642
Hpy8I	GTNNAC	6 cut(s)	629, 637, 1124, 1217, 1490, 1726
Hpy99I	CGWCG	2 cut(s)	248, 251
HpyAV	CCTTC	7 cut(s)	115, 552, 560, 1192, 1368, 1464, 1560
HpyCH4III	ACNGT	6 cut(s)	85, 163, 676, 991, 1360, 1687
HpyCH4V	TGCA	4 cut(s)	998, 1124, 1303, 1789
Hsp92I	GRCGYC	1 cut(s)	141
Hsp92II	CATG	5 cut(s)	115, 1481, 1569, 1793, 1902
HspAI	GCGC	8 cut(s)	49, 61, 192, 264, 320, 329, 431, 864
KpnI	GGTACC	1 cut(s)	1212
LguI	GCTCTTC	1 cut(s)	924
Lsp1109I	GCAGC	4 cut(s)	79, 184, 765, 1868
LweI	GCATC	4 cut(s)	141, 1007, 1297, 1580
MabI	ACCWGGT	1 cut(s)	1236
MaeI	CTAG	1 cut(s)	356
MaeIII	GTNAC	8 cut(s)	844, 991, 1110, 1201, 1232, 1332, 1471, 1672
MbiI	CCGCTC	1 cut(s)	79
MboII	GAAGA	9 cut(s)	3, 487, 608, 911, 1045, 1431, 1449, 1545, 1619
MflI	RGATCY	5 cut(s)	38, 807, 956, 1429, 1642
MhlI	GDGCHC	5 cut(s)	24, 288, 919, 1103, 1126
MluCI	AATT	8 cut(s)	501, 521, 742, 984, 1288, 1366, 1537, 1744
MlyI	GAGTC	3 cut(s)	221, 1022, 1416
MmeI	TCCRAC	3 cut(s)	376, 931, 1377
MroXI	GAANNNNTTC	1 cut(s)	1291
MseI	TTAA	2 cut(s)	852, 983
MspA1I	CMGCKG	1 cut(s)	1391
MspR9I	CCNGG	6 cut(s)	55, 93, 239, 1238, 1803, 1853
Mva1269I	GAATGC	1 cut(s)	1877
MvaI	CCWGG	4 cut(s)	55, 93, 1238, 1853
MvnI	CGCG	1 cut(s)	61
NciI	CCSGG	2 cut(s)	239, 1803
NcoI	CCATGG	1 cut(s)	1565
NlaIII	CATG	5 cut(s)	115, 1481, 1569, 1793, 1902
NmeAIII	GCCGAG	2 cut(s)	774, 991
NmuCI	GTSAC	3 cut(s)	1110, 1232, 1672
NspI	RCATGY	1 cut(s)	115
PaeI	GCATGC	1 cut(s)	115
PagI	TCATGA	1 cut(s)	1898
PceI	AGGCCT	1 cut(s)	664
PciSI	GCTCTTC	1 cut(s)	924
PctI	GAATGC	1 cut(s)	1877
PdmI	GAANNNNTTC	1 cut(s)	1291
PfeI	GAWTC	6 cut(s)	204, 352, 856, 1006, 1192, 1596
PflFI	GACNNNGTC	2 cut(s)	239, 1238
PfoI	TCCNGGA	1 cut(s)	1801
PinAI	ACCGGT	1 cut(s)	1889
PkrI	GCNGC	8 cut(s)	69, 140, 174, 216, 367, 461, 755, 1858
PleI	GAGTC	3 cut(s)	221, 1021, 1416
PpsI	GAGTC	3 cut(s)	221, 1021, 1416
PpuMI	RGGWCCY	1 cut(s)	1240
PshBI	ATTAAT	1 cut(s)	983
Psp124BI	GAGCTC	1 cut(s)	1103
Psp5II	RGGWCCY	1 cut(s)	1240
Psp6I	CCWGG	4 cut(s)	53, 91, 1236, 1851
PspEI	GGTNACC	2 cut(s)	1110, 1232
PspFI	CCCAGC	3 cut(s)	23, 260, 1162
PspGI	CCWGG	4 cut(s)	53, 91, 1236, 1851
PspPI	GGNCC	5 cut(s)	235, 273, 539, 1240, 1892
PspPPI	RGGWCCY	1 cut(s)	1240
PstNI	CAGNNNCTG	1 cut(s)	1607
PsuI	RGATCY	5 cut(s)	38, 807, 956, 1429, 1642
PsyI	GACNNNGTC	2 cut(s)	239, 1238
PvuII	CAGCTG	1 cut(s)	1391
RsaI	GTAC	4 cut(s)	1210, 1275, 1316, 1727
RsaNI	GTAC	4 cut(s)	1209, 1274, 1315, 1726
Rsr2I	CGGWCCG	1 cut(s)	235
RsrII	CGGWCCG	1 cut(s)	235
SacI	GAGCTC	1 cut(s)	1103
SalI	GTCGAC	1 cut(s)	1488
SapI	GCTCTTC	1 cut(s)	924
SaqAI	TTAA	2 cut(s)	852, 983
SatI	GCNGC	8 cut(s)	68, 139, 173, 215, 366, 460, 754, 1857
Sau96I	GGNCC	5 cut(s)	235, 273, 539, 1240, 1892
SchI	GAGTC	3 cut(s)	221, 1022, 1416
ScrFI	CCNGG	6 cut(s)	55, 93, 239, 1238, 1803, 1853
SduI	GDGCHC	5 cut(s)	24, 288, 919, 1103, 1126
SexAI	ACCWGGT	1 cut(s)	1236
SfaNI	GCATC	4 cut(s)	141, 1007, 1297, 1580
SfcI	CTRYAG	2 cut(s)	1065, 1686
SgrAI	CRCCGGYG	1 cut(s)	188
SinI	GGWCC	5 cut(s)	235, 273, 539, 1240, 1892
SmlI	CTYRAG	3 cut(s)	760, 1057, 1096
SmoI	CTYRAG	3 cut(s)	760, 1057, 1096
SphI	GCATGC	1 cut(s)	115
Sse9I	AATT	8 cut(s)	501, 521, 742, 984, 1288, 1366, 1537, 1744
SseBI	AGGCCT	1 cut(s)	664
SspI	AATATT	1 cut(s)	1321
SspMI	CTAG	1 cut(s)	356
SstI	GAGCTC	1 cut(s)	1103
StuI	AGGCCT	1 cut(s)	664
StyD4I	CCNGG	6 cut(s)	53, 91, 237, 1236, 1801, 1851
StyI	CCWWGG	5 cut(s)	315, 1559, 1565, 1589, 1776
TaaI	ACNGT	6 cut(s)	85, 163, 676, 991, 1360, 1687
TaqI	TCGA	5 cut(s)	207, 225, 345, 1489, 1753
TaqII	GACCGA	1 cut(s)	1475
TasI	AATT	8 cut(s)	501, 521, 742, 984, 1288, 1366, 1537, 1744
TatI	WGTACW	2 cut(s)	1273, 1314
TauI	GCSGC	4 cut(s)	141, 217, 368, 462
TfiI	GAWTC	6 cut(s)	204, 352, 856, 1006, 1192, 1596
Tru1I	TTAA	2 cut(s)	852, 983
Tru9I	TTAA	2 cut(s)	852, 983
TscAI	CASTG	6 cut(s)	88, 295, 738, 822, 1657, 1728
TseFI	GTSAC	3 cut(s)	1110, 1232, 1672
TseI	GCWGC	4 cut(s)	67, 172, 753, 1856
Tsp45I	GTSAC	3 cut(s)	1110, 1232, 1672
TspDTI	ATGAA	5 cut(s)	990, 1281, 1449, 1806, 1870
TspGWI	ACGGA	3 cut(s)	51, 1234, 1743
TspRI	CASTG	6 cut(s)	88, 295, 738, 822, 1657, 1728
Tth111I	GACNNNGTC	2 cut(s)	239, 1238
VneI	GTGCAC	1 cut(s)	1122
VpaK11BI	GGWCC	5 cut(s)	235, 273, 539, 1240, 1892
VspI	ATTAAT	1 cut(s)	983
XapI	RAATTY	1 cut(s)	1288
XbaI	TCTAGA	1 cut(s)	355
XceI	RCATGY	1 cut(s)	115
XmiI	GTMKAC	2 cut(s)	1216, 1489
XmnI	GAANNNNTTC	1 cut(s)	1291
XspI	CTAG	1 cut(s)	356

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.