Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6B

Orthogroup ID

OG0002957

Physical Location & Seq

Genomic Coordinates Forward (+)

22349377 .. 22352591

Gene Structure 3215 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6BG140200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1215 bp

ATGGAGAAGGATCAGAAGATAGCATCTGAAGACACCAAGGTGGATATGTTCGAGGACGGTGACGAGTTTGAAGAGCTCAACATCAATCTAGGGTTCACCAGGCAGCCCTCCTTTTCAGCTCTGATTAATGAAGAGCGGTTTGGGGGTAAAAGAGAAATAGAAGGGGATATTTTGGCTGTAAAGAAAGCACTTGTTGCTGTCTCCGGCCGTCTTCAAGATTGTCCACCAGTTGACAAGACAAGGATGACTGGAAGTAGGCCTATTGAGACAGTTCCTCGTGAAACTTTACCTGATATTCGTGTAGATCACCTTTCACAGAGGAACTCAGTGATTTCCAATTTGCCGAGCAGCTCCATGAGTTATGCTTCAGGAGTTTGTCTGCCATCAATAGAGGCTGAAAGGATCTCAACACTGGATACAAGAACACTCCAGCAGGAAGTTACTTTTAAGATTCTTTGCGACAATGATAGGGTTGGGGGTGTCATTGGAAAAGGGGGTGCCATTGTCAAGGCTCTTCAGAATGAGACTGGTGCTACTATAAGTGTTGGAGGATCTGTGGCCGAGTGTGATGAAAGATTAATTACTAATCCTGAGTCCCGCTACTCTCCAGCACAAAAGGGTCTTGTTCTTGTCTTCTCAAGGTCTGTAGAGGCAGGCATTGAAAAGGGGCAAGACTCGAGCTCCAAAGGGTCACCTCTTATTGCACGCCTTGTTGTCCCGACAAGCCAAATTCGGAAGGTAACTGGTACCGGTATACGGATAATAGGTGGTGACCAGGTCCCGAAGTGTGCCGTAGAGAATGACGAAGTTGTACAGGTGTCAAGAAATTTTTCAAGTGTGCAAGATGCTTTGTACAATATTACTGGTAGGTTACGAGATAACCTTTTCTCCAACACAGTAAATAATTCTGGAAGGAGGAATAGTTCAGCCGTGCTAACAGATACCAATCCTTATGGAAGACTCAGGGATCCTGCTCCTACTGGATTTCAGCCTTCTTCATCAGTTGGTGGTACTCATGGTCTCGGTCGACATACTACTCTAACTCAAAGTATGGATCATCTTGGACTTTCCCATAATTTAGATCATCCTTCTTCACCAAGGCCATGGGCATCACAGATGGTTGCTCCAAGGGGAATCTCAGATACTAGCAGGGGTTTGACTTCTCTTAAAAGTGGCTCGGATCTTGGTAGGTTAGTAATGTCGCACAATGCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0007275 GO:0008150 GO:0009791 GO:0009908 GO:0009909 GO:0009911 GO:0016604 GO:0016607 GO:0022414 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045595 GO:0045596 GO:0048367 GO:0048437 GO:0048497 GO:0048518 GO:0048519 GO:0048523 GO:0048580 GO:0048582 GO:0048608 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051093 GO:0051094 GO:0051239 GO:0051240 GO:0061458 GO:0065007 GO:0070013 GO:0090567 GO:0090700 GO:0099402 GO:2000026 GO:2000241 GO:2000243

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

KH_1

Protein Analysis

404

Amino Acids

43.5

Weight (kDa)

6.42

Isoelectric Point (pI)

50.39

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
KH_1	PF00013	148 - 195	2.5e-10	KH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0002957)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G64390 AT5G64390 AT5G64390
fragaria_vesca	FvH4_2g11560 FvH4_2g11560 FvH4_2g11560
malus_domestica	MD05G1048400.v1.1 MD10G1054800.v1.1
prunus_persica	Prupe.8G070900_v2.0.a1
pyrus_communis	pycom05g04000 pycom10g04180
rosa_chinensis	RchiOBHm_Chr1g0353311 RchiOBHm_Chr4g0385021 RchiOBHm_Chr6g0270731 RchiOBHm_Chr6g0272811
rosa_laevigata	RLG00000013774
rosa_multiflora	Rmu_co8284529.1_g000001 Rmu_sc0000642.1_g000012 Rmu_sc0041041.1_g000001
rosa_roxburghii	Rroxscaffold_2G00085770 Rroxscaffold_7G00197640
rosa_rugosa	Rorug06G0056000 Rorug06G0056100 Rorug06G0056200
rosa_samantha	Rh2DG204000 Rh4CG002400 Rh4CG168900 Rh6AG157400 Rh6AG175200 Rh6BG140200 Rh6BG178600 Rh6CG174800 Rh6DG123600 Rh6DG167400 Rh6DG180500 Rh7AG209600 Rh7CG359700
rosa_wichuraiana	Rw6G014930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	746
AccB1I	GGYRCC	2 cut(s)	497, 746
AccBSI	CCGCTC	1 cut(s)	136
AccI	GTMKAC	2 cut(s)	754, 1027
AciI	CCGC	2 cut(s)	136, 598
AclWI	GGATC	7 cut(s)	18, 410, 559, 962, 975, 1062, 1188
AcoI	YGGCCR	2 cut(s)	205, 558
AcsI	RAATTY	2 cut(s)	729, 826
AcuI	CTGAAG	3 cut(s)	48, 351, 500
AfaI	GTAC	4 cut(s)	748, 813, 854, 1012
AfiI	CCNNNNNNNGG	1 cut(s)	756
AgeI	ACCGGT	1 cut(s)	749
AgsI	TTSAA	4 cut(s)	71, 215, 662, 834
AjnI	CCWGG	2 cut(s)	98, 774
AjuI	GAANNNNNNNTTGG	2 cut(s)	123, 155
AleI	CACNNNNGTG	1 cut(s)	38
AloI	GAACNNNNNNTCC	2 cut(s)	907, 939
AluBI	AGCT	4 cut(s)	76, 119, 351, 681
AluI	AGCT	4 cut(s)	76, 119, 351, 681
Alw21I	GWGCWC	2 cut(s)	78, 683
Alw26I	GTCTC	4 cut(s)	205, 260, 518, 1025
AlwI	GGATC	7 cut(s)	18, 410, 559, 962, 975, 1062, 1188
Ama87I	CYCGRG	1 cut(s)	676
AoxI	GGCC	4 cut(s)	205, 257, 558, 1100
ApeKI	GCWGC	2 cut(s)	103, 348
ApoI	RAATTY	2 cut(s)	729, 826
AseI	ATTAAT	2 cut(s)	126, 578
AsiGI	ACCGGT	1 cut(s)	749
Asp700I	GAANNNNTTC	1 cut(s)	829
Asp718I	GGTACC	1 cut(s)	746
AspS9I	GGNCC	1 cut(s)	778
AsuHPI	GGTGA	6 cut(s)	71, 88, 299, 684, 782, 1086
AvaI	CYCGRG	1 cut(s)	676
AvaII	GGWCC	1 cut(s)	778
BamHI	GGATCC	1 cut(s)	967
BanI	GGYRCC	2 cut(s)	497, 746
BanII	GRGCYC	2 cut(s)	78, 683
BauI	CACGAG	1 cut(s)	276
BbsI	GAAGAC	4 cut(s)	36, 203, 625, 964
Bbv12I	GWGCWC	2 cut(s)	78, 683
BbvI	GCAGC	2 cut(s)	115, 360
BccI	CCATC	2 cut(s)	391, 1111
BceAI	ACGGC	3 cut(s)	192, 776, 914
BciT130I	CCWGG	2 cut(s)	100, 776
BciVI	GTATCC	1 cut(s)	409
BcoDI	GTCTC	4 cut(s)	205, 260, 518, 1025
BfaI	CTAG	2 cut(s)	89, 1146
BfmI	CTRYAG	1 cut(s)	645
BfuI	GTATCC	1 cut(s)	409
BisI	GCNGC	2 cut(s)	104, 349
BlsI	GCNGC	2 cut(s)	105, 350
Bme1390I	CCNGG	2 cut(s)	100, 776
Bme18I	GGWCC	1 cut(s)	778
BmeT110I	CYCGRG	1 cut(s)	676
BmgT120I	GGNCC	1 cut(s)	778
BmiI	GGNNCC	4 cut(s)	499, 748, 780, 969
BmrFI	CCNGG	2 cut(s)	100, 776
BmsI	GCATC	3 cut(s)	32, 835, 1118
BpiI	GAAGAC	4 cut(s)	36, 203, 625, 964
BpmI	CTGGAG	2 cut(s)	413, 591
BpuEI	CTTGAG	1 cut(s)	622
BsaBI	GATNNNNATC	1 cut(s)	945
BsaI	GGTCTC	1 cut(s)	1025
BsaJI	CCNNGG	4 cut(s)	36, 1097, 1103, 1127
BsaWI	WCCGGW	1 cut(s)	749
BsaXI	ACNNNNNCTCC	8 cut(s)	540, 570, 665, 695, 872, 902, 907, 937
Bsc4I	CCNNNNNNNGG	1 cut(s)	756
Bse118I	RCCGGY	1 cut(s)	749
Bse1I	ACTGG	7 cut(s)	227, 253, 417, 532, 748, 868, 985
Bse8I	GATNNNNATC	1 cut(s)	945
BseBI	CCWGG	2 cut(s)	100, 776
BseDI	CCNNGG	4 cut(s)	36, 1097, 1103, 1127
BseGI	GGATG	2 cut(s)	249, 1084
BseJI	GATNNNNATC	1 cut(s)	945
BseLI	CCNNNNNNNGG	1 cut(s)	756
BseMII	CTCAG	4 cut(s)	339, 582, 976, 1152
BseNI	ACTGG	7 cut(s)	227, 253, 417, 532, 748, 868, 985
BseX3I	CGGCCG	1 cut(s)	205
BseXI	GCAGC	2 cut(s)	115, 360
Bsh1285I	CGRYCG	2 cut(s)	208, 1027
BshFI	GGCC	4 cut(s)	207, 259, 560, 1102
BshNI	GGYRCC	2 cut(s)	497, 746
BshTI	ACCGGT	1 cut(s)	749
BsiEI	CGRYCG	2 cut(s)	208, 1027
BsiHKAI	GWGCWC	2 cut(s)	78, 683
BsiHKCI	CYCGRG	1 cut(s)	676
BsiSI	CCGG	2 cut(s)	204, 750
BslFI	GGGAC	3 cut(s)	580, 701, 764
BslI	CCNNNNNNNGG	1 cut(s)	756
BsmAI	GTCTC	4 cut(s)	205, 260, 518, 1025
BsmFI	GGGAC	3 cut(s)	580, 701, 764
BsnI	GGCC	4 cut(s)	207, 259, 560, 1102
Bso31I	GGTCTC	1 cut(s)	1025
BsoBI	CYCGRG	1 cut(s)	676
Bsp1286I	GDGCHC	2 cut(s)	78, 683
Bsp1407I	TGTACA	2 cut(s)	811, 852
Bsp143I	GATC	8 cut(s)	10, 304, 402, 551, 967, 1054, 1081, 1180
Bsp19I	CCATGG	1 cut(s)	1103
BspACI	CCGC	2 cut(s)	136, 598
BspANI	GGCC	4 cut(s)	207, 259, 560, 1102
BspCNI	CTCAG	4 cut(s)	338, 583, 975, 1151
BspLI	GGNNCC	4 cut(s)	499, 748, 780, 969
BspPI	GGATC	7 cut(s)	18, 410, 559, 962, 975, 1062, 1188
BspQI	GCTCTTC	3 cut(s)	66, 126, 519
BspT107I	GGYRCC	2 cut(s)	497, 746
BspTNI	GGTCTC	1 cut(s)	1025
BsrBI	CCGCTC	1 cut(s)	136
BsrFI	RCCGGY	1 cut(s)	749
BsrGI	TGTACA	2 cut(s)	811, 852
BsrI	ACTGG	7 cut(s)	227, 253, 417, 532, 748, 868, 985
BssAI	RCCGGY	1 cut(s)	749
BssECI	CCNNGG	4 cut(s)	36, 1097, 1103, 1127
BssMI	GATC	8 cut(s)	10, 304, 402, 551, 967, 1054, 1081, 1180
BssNAI	GTATAC	1 cut(s)	755
BssSI	CACGAG	1 cut(s)	276
BssT1I	CCWWGG	4 cut(s)	36, 1097, 1103, 1127
Bst1107I	GTATAC	1 cut(s)	755
Bst2BI	CACGAG	1 cut(s)	276
Bst2UI	CCWGG	2 cut(s)	100, 776
Bst4CI	ACNGT	3 cut(s)	59, 271, 898
Bst6I	CTCTTC	3 cut(s)	66, 126, 519
BstAPI	GCANNNNNTGC	1 cut(s)	194
BstAUI	TGTACA	2 cut(s)	811, 852
BstC8I	GCNNGC	2 cut(s)	655, 706
BstDEI	CTNAG	4 cut(s)	325, 591, 962, 1138
BstDSI	CCRYGG	1 cut(s)	1103
BstEII	GGTNACC	2 cut(s)	690, 770
BstF5I	GGATG	2 cut(s)	249, 1084
BstKTI	GATC	8 cut(s)	13, 307, 405, 554, 970, 1057, 1084, 1183
BstMAI	GTCTC	4 cut(s)	205, 260, 518, 1025
BstMBI	GATC	8 cut(s)	10, 304, 402, 551, 967, 1054, 1081, 1180
BstMCI	CGRYCG	2 cut(s)	208, 1027
BstMWI	GCNNNNNNNGC	1 cut(s)	194
BstNI	CCWGG	2 cut(s)	100, 776
BstPI	GGTNACC	2 cut(s)	690, 770
BstSCI	CCNGG	2 cut(s)	98, 774
BstSFI	CTRYAG	1 cut(s)	645
BstV1I	GCAGC	2 cut(s)	115, 360
BstV2I	GAAGAC	4 cut(s)	36, 203, 625, 964
BstX2I	RGATCY	4 cut(s)	402, 551, 967, 1180
BstXI	CCANNNNNNTGG	1 cut(s)	1104
BstYI	RGATCY	4 cut(s)	402, 551, 967, 1180
BstZ17I	GTATAC	1 cut(s)	755
BstZI	CGGCCG	1 cut(s)	205
BsuI	GTATCC	1 cut(s)	409
BsuRI	GGCC	4 cut(s)	207, 259, 560, 1102
BtgI	CCRYGG	1 cut(s)	1103
BtsCI	GGATG	2 cut(s)	249, 1084
BtsIMutI	CAGTG	2 cut(s)	333, 410
Cac8I	GCNNGC	2 cut(s)	655, 706
Cfr10I	RCCGGY	1 cut(s)	749
Cfr13I	GGNCC	1 cut(s)	778
CsiI	ACCWGGT	1 cut(s)	774
Csp6I	GTAC	4 cut(s)	747, 812, 853, 1011
CspAI	ACCGGT	1 cut(s)	749
CviAII	CATG	3 cut(s)	355, 1016, 1104
CviQI	GTAC	4 cut(s)	747, 812, 853, 1011
DdeI	CTNAG	4 cut(s)	325, 591, 962, 1138
DpnI	GATC	8 cut(s)	12, 306, 404, 553, 969, 1056, 1083, 1182
DpnII	GATC	8 cut(s)	10, 304, 402, 551, 967, 1054, 1081, 1180
EaeI	YGGCCR	2 cut(s)	205, 558
EagI	CGGCCG	1 cut(s)	205
Eam1104I	CTCTTC	3 cut(s)	66, 126, 519
EarI	CTCTTC	3 cut(s)	66, 126, 519
Ecl136II	GAGCTC	2 cut(s)	76, 681
EclXI	CGGCCG	1 cut(s)	205
Eco130I	CCWWGG	4 cut(s)	36, 1097, 1103, 1127
Eco147I	AGGCCT	1 cut(s)	259
Eco24I	GRGCYC	2 cut(s)	78, 683
Eco31I	GGTCTC	1 cut(s)	1025
Eco47I	GGWCC	1 cut(s)	778
Eco52I	CGGCCG	1 cut(s)	205
Eco53kI	GAGCTC	2 cut(s)	76, 681
Eco57I	CTGAAG	3 cut(s)	48, 351, 500
Eco88I	CYCGRG	1 cut(s)	676
Eco91I	GGTNACC	2 cut(s)	690, 770
EcoICRI	GAGCTC	2 cut(s)	76, 681
EcoO109I	RGGNCCY	1 cut(s)	778
EcoO65I	GGTNACC	2 cut(s)	690, 770
EcoRII	CCWGG	2 cut(s)	98, 774
EcoT14I	CCWWGG	4 cut(s)	36, 1097, 1103, 1127
EcoT22I	ATGCAT	1 cut(s)	1213
EcoT38I	GRGCYC	2 cut(s)	78, 683
ErhI	CCWWGG	4 cut(s)	36, 1097, 1103, 1127
FaeI	CATG	3 cut(s)	358, 1019, 1107
FaqI	GGGAC	3 cut(s)	580, 701, 764
FatI	CATG	3 cut(s)	354, 1015, 1103
FauI	CCCGC	1 cut(s)	605
FblI	GTMKAC	2 cut(s)	754, 1027
Fnu4HI	GCNGC	2 cut(s)	104, 349
FokI	GGATG	2 cut(s)	256, 1071
FriOI	GRGCYC	2 cut(s)	78, 683
Fsp4HI	GCNGC	2 cut(s)	104, 349
FspBI	CTAG	2 cut(s)	89, 1146
GluI	GCNGC	2 cut(s)	104, 349
GsuI	CTGGAG	2 cut(s)	413, 591
HaeIII	GGCC	4 cut(s)	207, 259, 560, 1102
HapII	CCGG	2 cut(s)	204, 750
Hin1II	CATG	3 cut(s)	358, 1019, 1107
HincII	GTYRAC	2 cut(s)	232, 1028
HindII	GTYRAC	2 cut(s)	232, 1028
HinfI	GANTC	5 cut(s)	451, 593, 674, 960, 1134
HpaII	CCGG	2 cut(s)	204, 750
HphI	GGTGA	6 cut(s)	71, 88, 299, 684, 782, 1086
Hpy166II	GTNNAC	5 cut(s)	96, 224, 232, 755, 1028
Hpy188I	TCNGA	7 cut(s)	15, 28, 123, 519, 735, 1141, 1180
Hpy188III	TCNNGA	8 cut(s)	215, 278, 369, 590, 718, 781, 822, 909
Hpy8I	GTNNAC	5 cut(s)	96, 224, 232, 755, 1028
HpyAV	CCTTC	5 cut(s)	155, 730, 906, 1002, 1098
HpyCH4III	ACNGT	3 cut(s)	59, 271, 898
HpyCH4V	TGCA	3 cut(s)	704, 841, 1211
HpyF10VI	GCNNNNNNNGC	1 cut(s)	194
HpyF3I	CTNAG	4 cut(s)	325, 591, 962, 1138
Hsp92II	CATG	3 cut(s)	358, 1019, 1107
KpnI	GGTACC	1 cut(s)	750
Kzo9I	GATC	8 cut(s)	10, 304, 402, 551, 967, 1054, 1081, 1180
LguI	GCTCTTC	3 cut(s)	66, 126, 519
LmnI	GCTCC	4 cut(s)	356, 686, 979, 1129
Lsp1109I	GCAGC	2 cut(s)	115, 360
LweI	GCATC	3 cut(s)	32, 835, 1118
MabI	ACCWGGT	1 cut(s)	774
MaeI	CTAG	2 cut(s)	89, 1146
MaeIII	GTNAC	6 cut(s)	59, 439, 690, 739, 770, 870
MalI	GATC	8 cut(s)	12, 306, 404, 553, 969, 1056, 1083, 1182
MbiI	CCGCTC	1 cut(s)	136
MboI	GATC	8 cut(s)	10, 304, 402, 551, 967, 1054, 1081, 1180
MflI	RGATCY	4 cut(s)	402, 551, 967, 1180
MhlI	GDGCHC	2 cut(s)	78, 683
MluCI	AATT	6 cut(s)	337, 579, 729, 826, 904, 1075
MlyI	GAGTC	3 cut(s)	602, 668, 954
MmeI	TCCRAC	2 cut(s)	526, 915
MnlI	CCTC	9 cut(s)	46, 118, 285, 312, 385, 542, 643, 705, 909
Mph1103I	ATGCAT	1 cut(s)	1213
MroXI	GAANNNNTTC	1 cut(s)	829
MseI	TTAA	4 cut(s)	126, 447, 578, 1167
MslI	CAYNNNNRTG	1 cut(s)	38
MspI	CCGG	2 cut(s)	204, 750
MspR9I	CCNGG	2 cut(s)	100, 776
MvaI	CCWGG	2 cut(s)	100, 776
MwoI	GCNNNNNNNGC	1 cut(s)	194
NcoI	CCATGG	1 cut(s)	1103
NdeII	GATC	8 cut(s)	10, 304, 402, 551, 967, 1054, 1081, 1180
NlaIII	CATG	3 cut(s)	358, 1019, 1107
NlaIV	GGNNCC	4 cut(s)	499, 748, 780, 969
NmeAIII	GCCGAG	2 cut(s)	369, 586
NmuCI	GTSAC	3 cut(s)	59, 690, 770
NsiI	ATGCAT	1 cut(s)	1213
OliI	CACNNNNGTG	1 cut(s)	38
PaeR7I	CTCGAG	1 cut(s)	676
PceI	AGGCCT	1 cut(s)	259
PciSI	GCTCTTC	3 cut(s)	66, 126, 519
PdmI	GAANNNNTTC	1 cut(s)	829
PfeI	GAWTC	2 cut(s)	451, 1134
PflFI	GACNNNGTC	1 cut(s)	776
PinAI	ACCGGT	1 cut(s)	749
PkrI	GCNGC	2 cut(s)	105, 350
PleI	GAGTC	3 cut(s)	601, 668, 954
PpsI	GAGTC	3 cut(s)	601, 668, 954
PpuMI	RGGWCCY	1 cut(s)	778
PshBI	ATTAAT	2 cut(s)	126, 578
Psp124BI	GAGCTC	2 cut(s)	78, 683
Psp5II	RGGWCCY	1 cut(s)	778
Psp6I	CCWGG	2 cut(s)	98, 774
PspEI	GGTNACC	2 cut(s)	690, 770
PspGI	CCWGG	2 cut(s)	98, 774
PspN4I	GGNNCC	4 cut(s)	499, 748, 780, 969
PspPI	GGNCC	1 cut(s)	778
PspPPI	RGGWCCY	1 cut(s)	778
PspXI	VCTCGAGB	1 cut(s)	676
PsuI	RGATCY	4 cut(s)	402, 551, 967, 1180
PsyI	GACNNNGTC	1 cut(s)	776
RsaI	GTAC	4 cut(s)	748, 813, 854, 1012
RsaNI	GTAC	4 cut(s)	747, 812, 853, 1011
RseI	CAYNNNNRTG	1 cut(s)	38
SacI	GAGCTC	2 cut(s)	78, 683
SalI	GTCGAC	1 cut(s)	1026
SapI	GCTCTTC	3 cut(s)	66, 126, 519
SaqAI	TTAA	4 cut(s)	126, 447, 578, 1167
SatI	GCNGC	2 cut(s)	104, 349
Sau3AI	GATC	8 cut(s)	10, 304, 402, 551, 967, 1054, 1081, 1180
Sau96I	GGNCC	1 cut(s)	778
SchI	GAGTC	3 cut(s)	602, 668, 954
ScrFI	CCNGG	2 cut(s)	100, 776
SduI	GDGCHC	2 cut(s)	78, 683
SexAI	ACCWGGT	1 cut(s)	774
SfaNI	GCATC	3 cut(s)	32, 835, 1118
SfcI	CTRYAG	1 cut(s)	645
Sfr274I	CTCGAG	1 cut(s)	676
SinI	GGWCC	1 cut(s)	778
SlaI	CTCGAG	1 cut(s)	676
SmiMI	CAYNNNNRTG	1 cut(s)	38
SmlI	CTYRAG	2 cut(s)	637, 676
SmoI	CTYRAG	2 cut(s)	637, 676
Sse9I	AATT	6 cut(s)	337, 579, 729, 826, 904, 1075
SseBI	AGGCCT	1 cut(s)	259
SsiI	CCGC	2 cut(s)	136, 598
SspI	AATATT	1 cut(s)	859
SspMI	CTAG	2 cut(s)	89, 1146
SstI	GAGCTC	2 cut(s)	78, 683
StuI	AGGCCT	1 cut(s)	259
StyD4I	CCNGG	2 cut(s)	98, 774
StyI	CCWWGG	4 cut(s)	36, 1097, 1103, 1127
TaaI	ACNGT	3 cut(s)	59, 271, 898
TaqI	TCGA	3 cut(s)	51, 677, 1027
TaqII	GACCGA	1 cut(s)	1013
TasI	AATT	6 cut(s)	337, 579, 729, 826, 904, 1075
TatI	WGTACW	2 cut(s)	811, 852
TfiI	GAWTC	2 cut(s)	451, 1134
Tru1I	TTAA	4 cut(s)	126, 447, 578, 1167
Tru9I	TTAA	4 cut(s)	126, 447, 578, 1167
TscAI	CASTG	2 cut(s)	333, 417
TseFI	GTSAC	3 cut(s)	59, 690, 770
TseI	GCWGC	2 cut(s)	103, 348
Tsp45I	GTSAC	3 cut(s)	59, 690, 770
TspDTI	ATGAA	3 cut(s)	144, 585, 987
TspGWI	ACGGA	1 cut(s)	772
TspRI	CASTG	2 cut(s)	333, 417
Tth111I	GACNNNGTC	1 cut(s)	776
VpaK11BI	GGWCC	1 cut(s)	778
VspI	ATTAAT	2 cut(s)	126, 578
XapI	RAATTY	2 cut(s)	729, 826
XhoI	CTCGAG	1 cut(s)	676
XmiI	GTMKAC	2 cut(s)	754, 1027
XmnI	GAANNNNTTC	1 cut(s)	829
XspI	CTAG	2 cut(s)	89, 1146
Zsp2I	ATGCAT	1 cut(s)	1213

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.