Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6A

Orthogroup ID

OG0002957

Physical Location & Seq

Genomic Coordinates Reverse (-)

28477749 .. 28484478

Gene Structure 6730 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6AG175200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1455 bp

ATGGGAAGTACCTTTCTCTCTCTACCAGCGAAGCGTTCAATTTCTTCGACAATGTCCTCCTCTTCCTCCGAGCCCAGCTTAGAAAACGGATCCTCCAAGCGCTCCAGGTCGCGACAGCAGCAGGCTCCGCTCACTGTTCCTCCAGGCCACGTCGCCTTCCGCATGCTCTGCCACGCCTCCCGCATCGGCGGCGTCATCGGCAAGTCCGGCACCGTCATCAAGCAGCTCCAGCAGGCCACCGGCGCAAAGATCAGAATCGAGGAGCCGCCCCAACTCGACTCGCCGGACCGGGTCGTCGTCGTCATTGCTCCCAGCGCAATCCGGTCCAAGATTGTGCTCAGTGGAGACCAAGAGATTGAGGTTTCCAAGGCGCAAGAGGCGCTTGTGAGAGTGTTCGAGAGGATTCTAGAGGTGGCGGCGGAGACCGGAGCGATAGGAGTAGGGGTTGGAGTGGTGTCTTGCCGGTTTCTGGCGGAGACGGCGCAGGTCGGCTCGGTGATAGGCAAGGGCGGCAAGGTGGTGGAGAAGATTAGAAAAGAGACTGGCTGTAAAATTAGGGTCTTGAATGAGAAATTGCCCGTTTGTGCTGCTCCTTCTGACGAGATGGTAGAGATAGAAGGGGATATTTTGGCTGTAAAGAAAGCACTTGTTGCTGTCTCCGGCCGTCTTCAAGATTGTCCACCAGTTGACAAGACAAGGATGACTGGAAGTAGGCCTATTGAGACCGTTCCTCGTGAAACTTTACCTGATATTCGTGTAGATCACCTTTCACAGAGGAACTCAGTGATTTCCAATTTGCCGAGCAGCTCCTTGAGTTATGCTTCAGGAGTTCGTCCGCCATCAATAGAGGCTGAAAGGATCTCAACACTGGATACAAGAACACTCCAGCAGGAAGTTACTTTTAAGATTCTTTGCGCCAATGATAGGGTTGGGGGTGTCATTGGAAAAGGGGGTGCCATTGTCAGGGCTCTTCAGAATGAGACTGGTGCTACTATAAGTGTTGGAGGATCTGTGGCCGAGTGTGATGAAAGATTAATTACTGTTACTGCATCAGAGAATCCTGAGTCCCGCTACTCGCCAGCACAAAAGGGTCTTGTTCTTGTCTTCTCAAGGTCTGTAGAGGCAGGCATTGAAAAGGGGCAAGACTCGAGCTCCAAAGGGTCACCTCTTAGTGCACGCCTTGTTGTCCCGACAAGCCAAGTTGGTTGTTTGCTGGGAAAAGGGGGTGTAATAGTTTCAGAGATTCGGAAGGTAACTGGTACCAGTATACGGATAATAGGTGGTGACCAGGTCCCGAAGTGTGCCTTAGAGAATGATGAAGTTGTACAGGTTTCAGGAAATTTTTCAAGTGTGCAAGATGCTTTGTACAATATTACTGGGATCCTGCTCCTACTGGATTTCAGCCTTCTTCATCAGTTGGTGTTACTCATGGTCTCGGTCGACATACCACTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0007275 GO:0008150 GO:0009791 GO:0009908 GO:0009909 GO:0009911 GO:0016604 GO:0016607 GO:0022414 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045595 GO:0045596 GO:0048367 GO:0048437 GO:0048497 GO:0048518 GO:0048519 GO:0048523 GO:0048580 GO:0048582 GO:0048608 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051093 GO:0051094 GO:0051239 GO:0051240 GO:0061458 GO:0065007 GO:0070013 GO:0090567 GO:0090700 GO:0099402 GO:2000026 GO:2000241 GO:2000243

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

KH_1

Protein Analysis

484

Amino Acids

51.14

Weight (kDa)

8.66

Isoelectric Point (pI)

52.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
KH_1	PF00013	53 - 104	1.6e-12	KH domain
KH_1	PF00013	154 - 219	1.3e-13	KH domain
KH_1	PF00013	300 - 352	1.2e-11	KH domain
KH_1	PF00013	392 - 458	6.9e-15	KH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002957)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G64390 AT5G64390 AT5G64390
fragaria_vesca	FvH4_2g11560 FvH4_2g11560 FvH4_2g11560
malus_domestica	MD05G1048400.v1.1 MD10G1054800.v1.1
prunus_persica	Prupe.8G070900_v2.0.a1
pyrus_communis	pycom05g04000 pycom10g04180
rosa_chinensis	RchiOBHm_Chr1g0353311 RchiOBHm_Chr4g0385021 RchiOBHm_Chr6g0270731 RchiOBHm_Chr6g0272811
rosa_laevigata	RLG00000013774
rosa_multiflora	Rmu_co8284529.1_g000001 Rmu_sc0000642.1_g000012 Rmu_sc0041041.1_g000001
rosa_roxburghii	Rroxscaffold_2G00085770 Rroxscaffold_7G00197640
rosa_rugosa	Rorug06G0056000 Rorug06G0056100 Rorug06G0056200
rosa_samantha	Rh2DG204000 Rh4CG002400 Rh4CG168900 Rh6AG157400 Rh6AG175200 Rh6BG140200 Rh6BG178600 Rh6CG174800 Rh6DG123600 Rh6DG167400 Rh6DG180500 Rh7AG209600 Rh7CG359700
rosa_wichuraiana	Rw6G014930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	293
Acc36I	ACCTGC	1 cut(s)	475
Acc65I	GGTACC	1 cut(s)	1259
AccB1I	GGYRCC	3 cut(s)	209, 953, 1259
AccBSI	CCGCTC	1 cut(s)	130
AccI	GTMKAC	2 cut(s)	1267, 1440
AccII	CGCG	1 cut(s)	112
AclWI	GGATC	6 cut(s)	84, 97, 866, 1015, 1375, 1388
AcoI	YGGCCR	2 cut(s)	661, 1014
AcsI	RAATTY	1 cut(s)	1339
AcuI	CTGAAG	2 cut(s)	807, 956
AcyI	GRCGYC	1 cut(s)	192
AfaI	GTAC	4 cut(s)	10, 1261, 1326, 1367
AfeI	AGCGCT	1 cut(s)	101
AfiI	CCNNNNNNNGG	4 cut(s)	469, 924, 963, 1269
AgsI	TTSAA	5 cut(s)	39, 565, 671, 1133, 1347
AjiI	CACGTC	1 cut(s)	151
AjnI	CCWGG	3 cut(s)	104, 142, 1287
AluBI	AGCT	4 cut(s)	78, 226, 807, 1152
AluI	AGCT	4 cut(s)	78, 226, 807, 1152
Alw21I	GWGCWC	3 cut(s)	339, 1154, 1177
Alw26I	GTCTC	8 cut(s)	339, 416, 470, 533, 661, 716, 974, 1438
Alw44I	GTGCAC	1 cut(s)	1173
AlwI	GGATC	6 cut(s)	84, 97, 866, 1015, 1375, 1388
Ama87I	CYCGRG	1 cut(s)	1147
Aor51HI	AGCGCT	1 cut(s)	101
AoxI	GGCC	5 cut(s)	145, 234, 661, 713, 1014
ApaLI	GTGCAC	1 cut(s)	1173
ApeKI	GCWGC	4 cut(s)	118, 223, 587, 804
ApoI	RAATTY	1 cut(s)	1339
AseI	ATTAAT	1 cut(s)	1034
Asp700I	GAANNNNTTC	1 cut(s)	1342
Asp718I	GGTACC	1 cut(s)	1259
AspLEI	GCGC	7 cut(s)	102, 245, 317, 373, 382, 484, 917
AspS9I	GGNCC	3 cut(s)	286, 324, 1291
AsuC2I	CCSGG	1 cut(s)	290
AsuHPI	GGTGA	4 cut(s)	508, 755, 1155, 1295
AvaI	CYCGRG	1 cut(s)	1147
AvaII	GGWCC	3 cut(s)	286, 324, 1291
BaeGI	GKGCMC	1 cut(s)	1177
BamHI	GGATCC	2 cut(s)	89, 1380
BanI	GGYRCC	3 cut(s)	209, 953, 1259
BanII	GRGCYC	3 cut(s)	75, 970, 1154
BauI	CACGAG	1 cut(s)	732
BbsI	GAAGAC	2 cut(s)	659, 1096
Bbv12I	GWGCWC	3 cut(s)	339, 1154, 1177
BbvI	GCAGC	4 cut(s)	130, 235, 574, 816
BccI	CCATC	2 cut(s)	598, 847
BceAI	ACGGC	2 cut(s)	495, 648
BciT130I	CCWGG	3 cut(s)	106, 144, 1289
BciVI	GTATCC	1 cut(s)	865
BcnI	CCSGG	1 cut(s)	290
BcoDI	GTCTC	8 cut(s)	339, 416, 470, 533, 661, 716, 974, 1438
BfaI	CTAG	1 cut(s)	407
BfmI	CTRYAG	1 cut(s)	1116
BfoI	RGCGCY	2 cut(s)	103, 383
BfuAI	ACCTGC	1 cut(s)	475
BfuI	GTATCC	1 cut(s)	865
BisI	GCNGC	8 cut(s)	119, 190, 224, 266, 417, 511, 588, 805
BlsI	GCNGC	8 cut(s)	120, 191, 225, 267, 418, 512, 589, 806
Bme1390I	CCNGG	4 cut(s)	106, 144, 290, 1289
Bme18I	GGWCC	3 cut(s)	286, 324, 1291
BmeT110I	CYCGRG	1 cut(s)	1147
BmgBI	CACGTC	1 cut(s)	151
BmgT120I	GGNCC	3 cut(s)	286, 324, 1291
BmiI	GGNNCC	8 cut(s)	91, 126, 211, 264, 955, 1261, 1293, 1382
BmrFI	CCNGG	4 cut(s)	106, 144, 290, 1289
BmrI	ACTGGG	1 cut(s)	1386
BmsI	GCATC	3 cut(s)	192, 1058, 1348
BmuI	ACTGGG	1 cut(s)	1386
BpiI	GAAGAC	2 cut(s)	659, 1096
BpmI	CTGGAG	4 cut(s)	88, 126, 212, 869
BpuEI	CTTGAG	2 cut(s)	832, 1093
BpuMI	CCSGG	1 cut(s)	290
BsaBI	GATNNNNATC	1 cut(s)	254
BsaHI	GRCGYC	1 cut(s)	192
BsaI	GGTCTC	4 cut(s)	339, 416, 716, 1438
BsaJI	CCNNGG	1 cut(s)	366
BsaWI	WCCGGW	2 cut(s)	321, 425
Bsc4I	CCNNNNNNNGG	4 cut(s)	469, 924, 963, 1269
Bse118I	RCCGGY	2 cut(s)	239, 462
Bse1I	ACTGG	9 cut(s)	547, 683, 709, 873, 988, 1261, 1263, 1381, 1398
Bse3DI	GCAATG	1 cut(s)	303
Bse8I	GATNNNNATC	1 cut(s)	254
BseBI	CCWGG	3 cut(s)	106, 144, 1289
BseDI	CCNNGG	1 cut(s)	366
BseGI	GGATG	1 cut(s)	705
BseJI	GATNNNNATC	1 cut(s)	254
BseLI	CCNNNNNNNGG	4 cut(s)	469, 924, 963, 1269
BseMI	GCAATG	1 cut(s)	303
BseMII	CTCAG	3 cut(s)	352, 795, 1053
BseNI	ACTGG	9 cut(s)	547, 683, 709, 873, 988, 1261, 1263, 1381, 1398
BseRI	GAGGAG	2 cut(s)	49, 275
BseSI	GKGCMC	1 cut(s)	1177
BseX3I	CGGCCG	1 cut(s)	661
BseXI	GCAGC	4 cut(s)	130, 235, 574, 816
BseYI	CCCAGC	3 cut(s)	74, 311, 1213
Bsh1236I	CGCG	1 cut(s)	112
Bsh1285I	CGRYCG	2 cut(s)	664, 1440
BshFI	GGCC	5 cut(s)	147, 236, 663, 715, 1016
BshNI	GGYRCC	3 cut(s)	209, 953, 1259
BsiEI	CGRYCG	2 cut(s)	664, 1440
BsiHKAI	GWGCWC	3 cut(s)	339, 1154, 1177
BsiHKCI	CYCGRG	1 cut(s)	1147
BsiSI	CCGG	8 cut(s)	207, 240, 284, 289, 322, 426, 463, 660
BslFI	GGGAC	3 cut(s)	1051, 1172, 1277
BslI	CCNNNNNNNGG	4 cut(s)	469, 924, 963, 1269
BsmAI	GTCTC	8 cut(s)	339, 416, 470, 533, 661, 716, 974, 1438
BsmBI	CGTCTC	1 cut(s)	470
BsmFI	GGGAC	3 cut(s)	1051, 1172, 1277
BsnI	GGCC	5 cut(s)	147, 236, 663, 715, 1016
Bso31I	GGTCTC	4 cut(s)	339, 416, 716, 1438
BsoBI	CYCGRG	1 cut(s)	1147
Bsp1286I	GDGCHC	5 cut(s)	75, 339, 970, 1154, 1177
Bsp1407I	TGTACA	2 cut(s)	1324, 1365
Bsp143I	GATC	6 cut(s)	89, 249, 760, 858, 1007, 1380
Bsp68I	TCGCGA	1 cut(s)	112
BspANI	GGCC	5 cut(s)	147, 236, 663, 715, 1016
BspCNI	CTCAG	3 cut(s)	351, 794, 1054
BspFNI	CGCG	1 cut(s)	112
BspLI	GGNNCC	8 cut(s)	91, 126, 211, 264, 955, 1261, 1293, 1382
BspMI	ACCTGC	1 cut(s)	475
BspPI	GGATC	6 cut(s)	84, 97, 866, 1015, 1375, 1388
BspQI	GCTCTTC	1 cut(s)	975
BspT107I	GGYRCC	3 cut(s)	209, 953, 1259
BspTNI	GGTCTC	4 cut(s)	339, 416, 716, 1438
BsrBI	CCGCTC	1 cut(s)	130
BsrDI	GCAATG	1 cut(s)	303
BsrFI	RCCGGY	2 cut(s)	239, 462
BsrGI	TGTACA	2 cut(s)	1324, 1365
BsrI	ACTGG	9 cut(s)	547, 683, 709, 873, 988, 1261, 1263, 1381, 1398
BssAI	RCCGGY	2 cut(s)	239, 462
BssECI	CCNNGG	1 cut(s)	366
BssMI	GATC	6 cut(s)	89, 249, 760, 858, 1007, 1380
BssNAI	GTATAC	1 cut(s)	1268
BssNI	GRCGYC	1 cut(s)	192
BssSI	CACGAG	1 cut(s)	732
BssT1I	CCWWGG	1 cut(s)	366
Bst1107I	GTATAC	1 cut(s)	1268
Bst2BI	CACGAG	1 cut(s)	732
Bst2UI	CCWGG	3 cut(s)	106, 144, 1289
Bst4CI	ACNGT	4 cut(s)	136, 214, 727, 1042
Bst6I	CTCTTC	2 cut(s)	67, 975
BstACI	GRCGYC	1 cut(s)	192
BstAPI	GCANNNNNTGC	2 cut(s)	168, 650
BstAUI	TGTACA	2 cut(s)	1324, 1365
BstC8I	GCNNGC	6 cut(s)	123, 164, 234, 1080, 1126, 1177
BstDEI	CTNAG	6 cut(s)	79, 338, 781, 1062, 1169, 1306
BstEII	GGTNACC	2 cut(s)	1161, 1283
BstF5I	GGATG	1 cut(s)	705
BstFNI	CGCG	1 cut(s)	112
BstH2I	RGCGCY	2 cut(s)	103, 383
BstHHI	GCGC	7 cut(s)	102, 245, 317, 373, 382, 484, 917
BstKTI	GATC	6 cut(s)	92, 252, 763, 861, 1010, 1383
BstMAI	GTCTC	8 cut(s)	339, 416, 470, 533, 661, 716, 974, 1438
BstMBI	GATC	6 cut(s)	89, 249, 760, 858, 1007, 1380
BstMCI	CGRYCG	2 cut(s)	664, 1440
BstNI	CCWGG	3 cut(s)	106, 144, 1289
BstNSI	RCATGY	1 cut(s)	166
BstPI	GGTNACC	2 cut(s)	1161, 1283
BstSCI	CCNGG	4 cut(s)	104, 142, 288, 1287
BstSFI	CTRYAG	1 cut(s)	1116
BstSLI	GKGCMC	1 cut(s)	1177
BstUI	CGCG	1 cut(s)	112
BstV1I	GCAGC	4 cut(s)	130, 235, 574, 816
BstV2I	GAAGAC	2 cut(s)	659, 1096
BstX2I	RGATCY	4 cut(s)	89, 858, 1007, 1380
BstYI	RGATCY	4 cut(s)	89, 858, 1007, 1380
BstZ17I	GTATAC	1 cut(s)	1268
BstZI	CGGCCG	1 cut(s)	661
BsuI	GTATCC	1 cut(s)	865
BsuRI	GGCC	5 cut(s)	147, 236, 663, 715, 1016
BtrI	CACGTC	1 cut(s)	151
BtsCI	GGATG	1 cut(s)	705
BtsIMutI	CAGTG	4 cut(s)	132, 346, 789, 866
BtuMI	TCGCGA	1 cut(s)	112
BveI	ACCTGC	1 cut(s)	475
Cac8I	GCNNGC	6 cut(s)	123, 164, 234, 1080, 1126, 1177
CfoI	GCGC	7 cut(s)	102, 245, 317, 373, 382, 484, 917
Cfr10I	RCCGGY	2 cut(s)	239, 462
Cfr13I	GGNCC	3 cut(s)	286, 324, 1291
CpoI	CGGWCCG	1 cut(s)	286
CseI	GACGC	1 cut(s)	181
CsiI	ACCWGGT	1 cut(s)	1287
Csp6I	GTAC	4 cut(s)	9, 1260, 1325, 1366
CspI	CGGWCCG	1 cut(s)	286
CviAII	CATG	2 cut(s)	163, 1429
CviQI	GTAC	4 cut(s)	9, 1260, 1325, 1366
DdeI	CTNAG	6 cut(s)	79, 338, 781, 1062, 1169, 1306
DpnI	GATC	6 cut(s)	91, 251, 762, 860, 1009, 1382
DpnII	GATC	6 cut(s)	89, 249, 760, 858, 1007, 1380
DrdI	GACNNNNNNGTC	1 cut(s)	293
DseDI	GACNNNNNNGTC	1 cut(s)	293
EaeI	YGGCCR	2 cut(s)	661, 1014
EagI	CGGCCG	1 cut(s)	661
Eam1104I	CTCTTC	2 cut(s)	67, 975
EarI	CTCTTC	2 cut(s)	67, 975
EciI	GGCGGA	3 cut(s)	434, 488, 825
Ecl136II	GAGCTC	1 cut(s)	1152
EclXI	CGGCCG	1 cut(s)	661
Eco130I	CCWWGG	1 cut(s)	366
Eco147I	AGGCCT	1 cut(s)	715
Eco24I	GRGCYC	3 cut(s)	75, 970, 1154
Eco31I	GGTCTC	4 cut(s)	339, 416, 716, 1438
Eco47I	GGWCC	3 cut(s)	286, 324, 1291
Eco47III	AGCGCT	1 cut(s)	101
Eco52I	CGGCCG	1 cut(s)	661
Eco53kI	GAGCTC	1 cut(s)	1152
Eco57I	CTGAAG	2 cut(s)	807, 956
Eco88I	CYCGRG	1 cut(s)	1147
Eco91I	GGTNACC	2 cut(s)	1161, 1283
EcoICRI	GAGCTC	1 cut(s)	1152
EcoO109I	RGGNCCY	1 cut(s)	1291
EcoO65I	GGTNACC	2 cut(s)	1161, 1283
EcoRII	CCWGG	3 cut(s)	104, 142, 1287
EcoT14I	CCWWGG	1 cut(s)	366
EcoT38I	GRGCYC	3 cut(s)	75, 970, 1154
ErhI	CCWWGG	1 cut(s)	366
Esp3I	CGTCTC	1 cut(s)	470
FaeI	CATG	2 cut(s)	166, 1432
FaiI	YATR	6 cut(s)	164, 819, 995, 1268, 1430, 1445
FalI	AAGNNNNNCTT	4 cut(s)	366, 398, 1289, 1321
FaqI	GGGAC	3 cut(s)	1051, 1172, 1277
FatI	CATG	2 cut(s)	162, 1428
FauI	CCCGC	2 cut(s)	188, 1076
FblI	GTMKAC	2 cut(s)	1267, 1440
Fnu4HI	GCNGC	8 cut(s)	119, 190, 224, 266, 417, 511, 588, 805
FokI	GGATG	1 cut(s)	712
FriOI	GRGCYC	3 cut(s)	75, 970, 1154
Fsp4HI	GCNGC	8 cut(s)	119, 190, 224, 266, 417, 511, 588, 805
FspBI	CTAG	1 cut(s)	407
GlaI	GCGC	7 cut(s)	101, 244, 316, 372, 381, 483, 916
GluI	GCNGC	8 cut(s)	119, 190, 224, 266, 417, 511, 588, 805
GsaI	CCCAGC	3 cut(s)	78, 315, 1217
GsuI	CTGGAG	4 cut(s)	88, 126, 212, 869
HaeII	RGCGCY	2 cut(s)	103, 383
HaeIII	GGCC	5 cut(s)	147, 236, 663, 715, 1016
HapII	CCGG	8 cut(s)	207, 240, 284, 289, 322, 426, 463, 660
HgaI	GACGC	1 cut(s)	181
HhaI	GCGC	7 cut(s)	102, 245, 317, 373, 382, 484, 917
Hin1I	GRCGYC	1 cut(s)	192
Hin1II	CATG	2 cut(s)	166, 1432
Hin6I	GCGC	7 cut(s)	100, 243, 315, 371, 380, 482, 915
HinP1I	GCGC	7 cut(s)	100, 243, 315, 371, 380, 482, 915
HincII	GTYRAC	2 cut(s)	688, 1441
HindII	GTYRAC	2 cut(s)	688, 1441
HinfI	GANTC	8 cut(s)	255, 278, 403, 907, 1057, 1064, 1145, 1243
HpaII	CCGG	8 cut(s)	207, 240, 284, 289, 322, 426, 463, 660
HphI	GGTGA	4 cut(s)	508, 755, 1155, 1295
Hpy166II	GTNNAC	5 cut(s)	680, 688, 1175, 1268, 1441
Hpy188I	TCNGA	7 cut(s)	70, 254, 598, 975, 1054, 1240, 1248
Hpy8I	GTNNAC	5 cut(s)	680, 688, 1175, 1268, 1441
Hpy99I	CGWCG	3 cut(s)	155, 299, 302
HpyAV	CCTTC	5 cut(s)	166, 603, 611, 1243, 1415
HpyCH4III	ACNGT	4 cut(s)	136, 214, 727, 1042
HpyCH4IV	ACGT	1 cut(s)	150
HpyCH4V	TGCA	3 cut(s)	1049, 1175, 1354
HpyF3I	CTNAG	6 cut(s)	79, 338, 781, 1062, 1169, 1306
HpySE526I	ACGT	1 cut(s)	150
Hsp92I	GRCGYC	1 cut(s)	192
Hsp92II	CATG	2 cut(s)	166, 1432
HspAI	GCGC	7 cut(s)	100, 243, 315, 371, 380, 482, 915
KpnI	GGTACC	1 cut(s)	1263
Kzo9I	GATC	6 cut(s)	89, 249, 760, 858, 1007, 1380
LguI	GCTCTTC	1 cut(s)	975
Lsp1109I	GCAGC	4 cut(s)	130, 235, 574, 816
LweI	GCATC	3 cut(s)	192, 1058, 1348
MabI	ACCWGGT	1 cut(s)	1287
MaeI	CTAG	1 cut(s)	407
MaeII	ACGT	1 cut(s)	150
MaeIII	GTNAC	6 cut(s)	895, 1042, 1161, 1252, 1283, 1422
MalI	GATC	6 cut(s)	91, 251, 762, 860, 1009, 1382
MbiI	CCGCTC	1 cut(s)	130
MboI	GATC	6 cut(s)	89, 249, 760, 858, 1007, 1380
MboII	GAAGA	7 cut(s)	36, 54, 538, 659, 962, 1096, 1400
MflI	RGATCY	4 cut(s)	89, 858, 1007, 1380
MhlI	GDGCHC	5 cut(s)	75, 339, 970, 1154, 1177
MluCI	AATT	6 cut(s)	39, 552, 572, 793, 1035, 1339
MlyI	GAGTC	3 cut(s)	272, 1073, 1139
MmeI	TCCRAC	2 cut(s)	427, 982
MroXI	GAANNNNTTC	1 cut(s)	1342
MseI	TTAA	2 cut(s)	903, 1034
MspI	CCGG	8 cut(s)	207, 240, 284, 289, 322, 426, 463, 660
MspR9I	CCNGG	4 cut(s)	106, 144, 290, 1289
MvaI	CCWGG	3 cut(s)	106, 144, 1289
MvnI	CGCG	1 cut(s)	112
NciI	CCSGG	1 cut(s)	290
NdeII	GATC	6 cut(s)	89, 249, 760, 858, 1007, 1380
NlaIII	CATG	2 cut(s)	166, 1432
NlaIV	GGNNCC	8 cut(s)	91, 126, 211, 264, 955, 1261, 1293, 1382
NmeAIII	GCCGAG	2 cut(s)	825, 1042
NmuCI	GTSAC	2 cut(s)	1161, 1283
NruI	TCGCGA	1 cut(s)	112
NspI	RCATGY	1 cut(s)	166
PaeI	GCATGC	1 cut(s)	166
PaeR7I	CTCGAG	1 cut(s)	1147
PceI	AGGCCT	1 cut(s)	715
PciSI	GCTCTTC	1 cut(s)	975
PdmI	GAANNNNTTC	1 cut(s)	1342
PfeI	GAWTC	5 cut(s)	255, 403, 907, 1057, 1243
PflFI	GACNNNGTC	3 cut(s)	52, 290, 1289
PkrI	GCNGC	8 cut(s)	120, 191, 225, 267, 418, 512, 589, 806
PleI	GAGTC	3 cut(s)	272, 1072, 1139
PpsI	GAGTC	3 cut(s)	272, 1072, 1139
PpuMI	RGGWCCY	1 cut(s)	1291
PshBI	ATTAAT	1 cut(s)	1034
Psp124BI	GAGCTC	1 cut(s)	1154
Psp5II	RGGWCCY	1 cut(s)	1291
Psp6I	CCWGG	3 cut(s)	104, 142, 1287
PspEI	GGTNACC	2 cut(s)	1161, 1283
PspFI	CCCAGC	3 cut(s)	74, 311, 1213
PspGI	CCWGG	3 cut(s)	104, 142, 1287
PspN4I	GGNNCC	8 cut(s)	91, 126, 211, 264, 955, 1261, 1293, 1382
PspPI	GGNCC	3 cut(s)	286, 324, 1291
PspPPI	RGGWCCY	1 cut(s)	1291
PspXI	VCTCGAGB	1 cut(s)	1147
PsuI	RGATCY	4 cut(s)	89, 858, 1007, 1380
PsyI	GACNNNGTC	3 cut(s)	52, 290, 1289
RruI	TCGCGA	1 cut(s)	112
RsaI	GTAC	4 cut(s)	10, 1261, 1326, 1367
RsaNI	GTAC	4 cut(s)	9, 1260, 1325, 1366
Rsr2I	CGGWCCG	1 cut(s)	286
RsrII	CGGWCCG	1 cut(s)	286
SacI	GAGCTC	1 cut(s)	1154
SalI	GTCGAC	1 cut(s)	1439
SapI	GCTCTTC	1 cut(s)	975
SaqAI	TTAA	2 cut(s)	903, 1034
SatI	GCNGC	8 cut(s)	119, 190, 224, 266, 417, 511, 588, 805
Sau3AI	GATC	6 cut(s)	89, 249, 760, 858, 1007, 1380
Sau96I	GGNCC	3 cut(s)	286, 324, 1291
SchI	GAGTC	3 cut(s)	272, 1073, 1139
ScrFI	CCNGG	4 cut(s)	106, 144, 290, 1289
SduI	GDGCHC	5 cut(s)	75, 339, 970, 1154, 1177
SexAI	ACCWGGT	1 cut(s)	1287
SfaNI	GCATC	3 cut(s)	192, 1058, 1348
SfcI	CTRYAG	1 cut(s)	1116
Sfr274I	CTCGAG	1 cut(s)	1147
SgrAI	CRCCGGYG	1 cut(s)	239
SinI	GGWCC	3 cut(s)	286, 324, 1291
SlaI	CTCGAG	1 cut(s)	1147
SmlI	CTYRAG	3 cut(s)	811, 1108, 1147
SmoI	CTYRAG	3 cut(s)	811, 1108, 1147
SphI	GCATGC	1 cut(s)	166
Sse9I	AATT	6 cut(s)	39, 552, 572, 793, 1035, 1339
SseBI	AGGCCT	1 cut(s)	715
SspI	AATATT	1 cut(s)	1372
SspMI	CTAG	1 cut(s)	407
SstI	GAGCTC	1 cut(s)	1154
StuI	AGGCCT	1 cut(s)	715
StyD4I	CCNGG	4 cut(s)	104, 142, 288, 1287
StyI	CCWWGG	1 cut(s)	366
TaaI	ACNGT	4 cut(s)	136, 214, 727, 1042
TaiI	ACGT	1 cut(s)	153
TaqI	TCGA	6 cut(s)	47, 258, 276, 396, 1148, 1440
TaqII	GACCGA	1 cut(s)	1426
TasI	AATT	6 cut(s)	39, 552, 572, 793, 1035, 1339
TatI	WGTACW	2 cut(s)	1324, 1365
TauI	GCSGC	4 cut(s)	192, 268, 419, 513
TfiI	GAWTC	5 cut(s)	255, 403, 907, 1057, 1243
Tru1I	TTAA	2 cut(s)	903, 1034
Tru9I	TTAA	2 cut(s)	903, 1034
TscAI	CASTG	4 cut(s)	139, 346, 789, 873
TseFI	GTSAC	2 cut(s)	1161, 1283
TseI	GCWGC	4 cut(s)	118, 223, 587, 804
Tsp45I	GTSAC	2 cut(s)	1161, 1283
TspDTI	ATGAA	3 cut(s)	1041, 1332, 1400
TspGWI	ACGGA	2 cut(s)	102, 1285
TspRI	CASTG	4 cut(s)	139, 346, 789, 873
Tth111I	GACNNNGTC	3 cut(s)	52, 290, 1289
VneI	GTGCAC	1 cut(s)	1173
VpaK11BI	GGWCC	3 cut(s)	286, 324, 1291
VspI	ATTAAT	1 cut(s)	1034
XapI	RAATTY	1 cut(s)	1339
XbaI	TCTAGA	1 cut(s)	406
XceI	RCATGY	1 cut(s)	166
XhoI	CTCGAG	1 cut(s)	1147
XmiI	GTMKAC	2 cut(s)	1267, 1440
XmnI	GAANNNNTTC	1 cut(s)	1342
XspI	CTAG	1 cut(s)	407

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.