Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr10

Orthogroup ID

OG0002957

Physical Location & Seq

Genomic Coordinates Forward (+)

7487549 .. 7494307

Gene Structure 6759 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD10G1054800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1962 bp

ATGGGAAGCACCTTTTTCTCTCTACCAGCGAAGCGTTCCCTATCGACGACAATGTCTTCTGATTCCAACCCCAACTTCGAAAAGGGACCCTCCAAGCGCTCCAGGCCCCCTCCTCCCCTCAGCGTCCCTCCCGCCCACGTCGCCTTCCGCATGCTCTGCCACGCCTCGCGCATCGGCGGCGTCATCGGAAAGTCCGGTAGCGTGATCAAGCAGCTCCAGCAAGCCACCGGAGCCAAGATCCGAATCGAAGAACCCCATGTCGAATCCCCTGACCGGGTCGTCGTGGTTATCGCTCCTAGCAAAATCGGCTCCAAGATTTGGCTGAGAACTCCAGTTCTAAACAATGTCTATAACGGTGGCGGCGGTGGTTTTGAAGAGGAGATTGAGGTTTCCAAGGCGCAGGAGGCGCTTCTGAGAGTGTTCGAGAGGATTCTGGAAGTTGCGGCGGAGACGGGGGCGATTGCGGCGGGGGTTGGGGTGGTTTCGTGCCGGGTTTTGGCGGAGGCGGCGCAGGTCGGGTCAGTGATAGGGAAGGGGGGGAAGGTGGTAGAGAAGATTAGGAAAGAAACTGGGTGTAAAATTAGGGTTTTGAATGAGAAGCTACCTGCTTGTGCTGCTGCCACTGACGAGATGATCGAGATAGAAGGGGATATTTTGGCTGTAAAGAAAGCACTTATTGCTGTTTCTGGCTGTCTTCAAGAATGTCCACCAGTTGACAAGACAAGGATGAGTGTAAGCAGGCCTGAGGCAGTTCCTCGTGAGACTCTACCTGATCTGCGTTTAGATCATCTTTCACAGAGGAACTCAATGCTTAATTTGCCAAGCAACTCCATGAGTTATGTTTCAGGAGTTCATCCATCATCAAGAGAGGCTGAAAGGATCCCCACACTTGAGACAAAACAACAGGAAGTTTCTTTCAGGATTCTTTGTGCCAATGATAGGATTGGTGGTGTAATTGGAAGGGGGGGTTCCATTGTTAGGGCTCTTCAAAATGAGACAGGTGCTGCAATAAGTGTTGCTGCCTCTGTGGCTGAGTGCGATGAACGATTAATTACTGTTTCTGCATCGGAGAATCCTGAATCAAGGTACTCGCCAGCACAAAAGGCTGCTGTTCTTGTCTTCTCAAGGTCCGTAGAGGCAGGCATTGAAAAGGGGCGAGACTCAAGCTCAAATAAAGGGTCACCCCTTACTGCACGGCTTGTAGTTTCATCAAACCAAGTTGGTTGTTTGCTGGGAAAAGGGGGTGTAATAGTTTCAGAGATCCGGAAGGCAACTGGCACTGGTATACGAATAGTAGGGGGTGACCAGGTCCCCAAGTGTGCCTTAGAGAATGATGAAGTTGTACAGATTTCAGGGGATTTTTCAAATGTGCAAGATGCTTTGTACAATATTACTGGTAGGTTACGAGATAACCTTTTCTCCAGCACAGTAAGTAATCCTGGAAGAAGGAGCAATTCATCCATGTTAACCGATACAAGTCCTTATGGAAGACTCAAGGATCCGAATCCTATTGGATATCAGCCATCATCATCGGTTGGTATTACTTGTGGTCTGAGCCGTCATTCAACACTAATTCAAAATATGGATCATCTTGGTCTTTCCCATAGTTTAGATCATCCTTCCCCACCAAGACCATGGGCATCACAGATGTCAGCTTTCACAGATGTTGGAAGGGGTCTGACTTCTTTAAAAAGTGGCACAGATATTGGCAGCGGGAGCAAATCTGCCATTGTGACAAATACAACTGTAGAGATCATAGTTCCTGAAAATGTTATTGGCTCTGTGTATGGAGAGAATGGTGCCAATTTGGCTCGTCTGAGACAGATTTCTAGTGCCAAGGTCATAGTGCATGAGCCCCGTCCTGGAACAACTGACAGGATTATTGTCATATCTGGGACACCTGATGAAACCCAGGCAGCACAGAGCCTTCTACATGCATTCATTCTTACTGGACCATCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0007275 GO:0008150 GO:0009791 GO:0009908 GO:0009909 GO:0009911 GO:0016604 GO:0016607 GO:0022414 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045595 GO:0045596 GO:0048367 GO:0048437 GO:0048497 GO:0048518 GO:0048519 GO:0048523 GO:0048580 GO:0048582 GO:0048608 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051093 GO:0051094 GO:0051239 GO:0051240 GO:0061458 GO:0065007 GO:0070013 GO:0090567 GO:0090700 GO:0099402 GO:2000026 GO:2000241 GO:2000243

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

KH_1

Protein Analysis

654

Amino Acids

69.06

Weight (kDa)

8.86

Isoelectric Point (pI)

48.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
KH_1	PF00013	49 - 99	8.1e-13	KH domain
KH_1	PF00013	163 - 228	1.8e-13	KH domain
KH_1	PF00013	306 - 357	5.3e-11	KH domain
KH_1	PF00013	397 - 464	1.2e-13	KH domain
KH_1	PF00013	582 - 645	2.8e-13	KH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002957)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G64390 AT5G64390 AT5G64390
fragaria_vesca	FvH4_2g11560 FvH4_2g11560 FvH4_2g11560
malus_domestica	MD05G1048400.v1.1 MD10G1054800.v1.1
prunus_persica	Prupe.8G070900_v2.0.a1
pyrus_communis	pycom05g04000 pycom10g04180
rosa_chinensis	RchiOBHm_Chr1g0353311 RchiOBHm_Chr4g0385021 RchiOBHm_Chr6g0270731 RchiOBHm_Chr6g0272811
rosa_laevigata	RLG00000013774
rosa_multiflora	Rmu_co8284529.1_g000001 Rmu_sc0000642.1_g000012 Rmu_sc0041041.1_g000001
rosa_roxburghii	Rroxscaffold_2G00085770 Rroxscaffold_7G00197640
rosa_rugosa	Rorug06G0056000 Rorug06G0056100 Rorug06G0056200
rosa_samantha	Rh2DG204000 Rh4CG002400 Rh4CG168900 Rh6AG157400 Rh6AG175200 Rh6BG140200 Rh6BG178600 Rh6CG174800 Rh6DG123600 Rh6DG167400 Rh6DG180500 Rh7AG209600 Rh7CG359700
rosa_wichuraiana	Rw6G014930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	52, 278
Acc36I	ACCTGC	2 cut(s)	502, 613
AccB1I	GGYRCC	1 cut(s)	1799
AccB7I	CCANNNNNTGG	1 cut(s)	318
AccI	GTMKAC	1 cut(s)	1285
AccII	CGCG	1 cut(s)	169
AccIII	TCCGGA	1 cut(s)	1263
AclWI	GGATC	7 cut(s)	232, 874, 887, 1255, 1493, 1506, 1593
AcyI	GRCGYC	1 cut(s)	180
AfaI	GTAC	3 cut(s)	1088, 1344, 1385
AfeI	AGCGCT	1 cut(s)	98
AfiI	CCNNNNNNNGG	7 cut(s)	273, 274, 318, 496, 939, 978, 1862
AgsI	TTSAA	8 cut(s)	374, 592, 698, 989, 1148, 1365, 1566, 1577
AjiI	CACGTC	1 cut(s)	139
AjnI	CCWGG	5 cut(s)	101, 1305, 1438, 1861, 1911
AjuI	GAANNNNNNNTTGG	4 cut(s)	59, 91, 1758, 1790
AluBI	AGCT	4 cut(s)	214, 601, 1167, 1655
AluI	AGCT	4 cut(s)	214, 601, 1167, 1655
Alw26I	GTCTC	6 cut(s)	443, 755, 887, 989, 1152, 1813
AlwI	GGATC	7 cut(s)	232, 874, 887, 1255, 1493, 1506, 1593
AlwNI	CAGNNNCTG	1 cut(s)	1004
Aor13HI	TCCGGA	1 cut(s)	1263
Aor51HI	AGCGCT	1 cut(s)	98
AoxI	GGCC	2 cut(s)	104, 740
ApeKI	GCWGC	8 cut(s)	211, 614, 617, 1004, 1019, 1106, 1710, 1916
ArsI	GACNNNNNNTTYG	2 cut(s)	1163, 1195
AseI	ATTAAT	1 cut(s)	1049
AspLEI	GCGC	5 cut(s)	99, 171, 400, 409, 511
AspS9I	GGNCC	5 cut(s)	86, 105, 1128, 1309, 1952
AsuC2I	CCSGG	2 cut(s)	275, 491
AsuHPI	GGTGA	2 cut(s)	1173, 1313
AsuII	TTCGAA	1 cut(s)	78
AvaII	GGWCC	4 cut(s)	86, 1128, 1309, 1952
AxyI	CCTNAGG	1 cut(s)	744
BamHI	GGATCC	2 cut(s)	879, 1498
BanI	GGYRCC	1 cut(s)	1799
BanII	GRGCYC	2 cut(s)	985, 1857
BauI	CACGAG	1 cut(s)	756
BbsI	GAAGAC	4 cut(s)	48, 686, 1111, 1495
BbvCI	CCTCAGC	1 cut(s)	119
BbvI	GCAGC	8 cut(s)	223, 601, 604, 991, 1006, 1093, 1722, 1928
BccI	CCATC	2 cut(s)	865, 1531
BceAI	ACGGC	2 cut(s)	1211, 1542
BciT130I	CCWGG	5 cut(s)	103, 1307, 1440, 1863, 1913
BclI	TGATCA	1 cut(s)	204
BcnI	CCSGG	2 cut(s)	275, 491
BcoDI	GTCTC	6 cut(s)	443, 755, 887, 989, 1152, 1813
BfaI	CTAG	2 cut(s)	297, 1830
BfmI	CTRYAG	1 cut(s)	1746
BfoI	RGCGCY	2 cut(s)	100, 410
BfuAI	ACCTGC	2 cut(s)	502, 613
BglI	GCCNNNNNGGC	2 cut(s)	1028, 1808
Bme1390I	CCNGG	7 cut(s)	103, 275, 491, 1307, 1440, 1863, 1913
Bme18I	GGWCC	4 cut(s)	86, 1128, 1309, 1952
BmgBI	CACGTC	1 cut(s)	139
BmgT120I	GGNCC	5 cut(s)	86, 105, 1128, 1309, 1952
BmrFI	CCNGG	7 cut(s)	103, 275, 491, 1307, 1440, 1863, 1913
BmrI	ACTGGG	1 cut(s)	579
BmsI	GCATC	4 cut(s)	180, 1073, 1366, 1649
BmuI	ACTGGG	1 cut(s)	579
BpiI	GAAGAC	4 cut(s)	48, 686, 1111, 1495
BpmI	CTGGAG	4 cut(s)	85, 200, 315, 1405
Bpu10I	CCTNAGC	1 cut(s)	119
Bpu14I	TTCGAA	1 cut(s)	78
BpuEI	CTTGAG	4 cut(s)	911, 1108, 1147, 1478
BpuMI	CCSGG	2 cut(s)	275, 491
BsaBI	GATNNNNATC	2 cut(s)	242, 1503
BsaHI	GRCGYC	1 cut(s)	180
BsaJI	CCNNGG	4 cut(s)	393, 1634, 1836, 1911
BsaWI	WCCGGW	3 cut(s)	194, 227, 1263
BsaXI	ACNNNNNCTCC	2 cut(s)	1403, 1433
Bsc4I	CCNNNNNNNGG	7 cut(s)	273, 274, 318, 496, 939, 978, 1862
Bse1I	ACTGG	7 cut(s)	332, 574, 710, 1279, 1285, 1399, 1954
Bse21I	CCTNAGG	1 cut(s)	744
Bse8I	GATNNNNATC	2 cut(s)	242, 1503
BseAI	TCCGGA	1 cut(s)	1263
BseBI	CCWGG	5 cut(s)	103, 1307, 1440, 1863, 1913
BseDI	CCNNGG	4 cut(s)	393, 1634, 1836, 1911
BseGI	GGATG	4 cut(s)	732, 853, 1457, 1615
BseJI	GATNNNNATC	2 cut(s)	242, 1503
BseLI	CCNNNNNNNGG	7 cut(s)	273, 274, 318, 496, 939, 978, 1862
BseMII	CTCAG	7 cut(s)	133, 314, 404, 735, 1023, 1544, 1808
BseNI	ACTGG	7 cut(s)	332, 574, 710, 1279, 1285, 1399, 1954
BseRI	GAGGAG	2 cut(s)	102, 392
BseXI	GCAGC	8 cut(s)	223, 601, 604, 991, 1006, 1093, 1722, 1928
BseYI	CCCAGC	1 cut(s)	1231
BsgI	GTGCAG	1 cut(s)	1176
Bsh1236I	CGCG	1 cut(s)	169
BshFI	GGCC	2 cut(s)	106, 742
BshNI	GGYRCC	1 cut(s)	1799
BsiSI	CCGG	5 cut(s)	195, 228, 274, 490, 1264
BslFI	GGGAC	4 cut(s)	99, 110, 1295, 1909
BslI	CCNNNNNNNGG	7 cut(s)	273, 274, 318, 496, 939, 978, 1862
BsmAI	GTCTC	6 cut(s)	443, 755, 887, 989, 1152, 1813
BsmBI	CGTCTC	1 cut(s)	443
BsmFI	GGGAC	4 cut(s)	99, 110, 1295, 1909
BsmI	GAATGC	1 cut(s)	1937
BsnI	GGCC	2 cut(s)	106, 742
Bsp119I	TTCGAA	1 cut(s)	78
Bsp1286I	GDGCHC	2 cut(s)	985, 1857
Bsp13I	TCCGGA	1 cut(s)	1263
Bsp1407I	TGTACA	2 cut(s)	1342, 1383
Bsp19I	CCATGG	1 cut(s)	1634
BspANI	GGCC	2 cut(s)	106, 742
BspCNI	CTCAG	7 cut(s)	132, 315, 405, 736, 1024, 1545, 1809
BspEI	TCCGGA	1 cut(s)	1263
BspFNI	CGCG	1 cut(s)	169
BspHI	TCATGA	1 cut(s)	1958
BspMI	ACCTGC	2 cut(s)	502, 613
BspPI	GGATC	7 cut(s)	232, 874, 887, 1255, 1493, 1506, 1593
BspQI	GCTCTTC	1 cut(s)	990
BspT104I	TTCGAA	1 cut(s)	78
BspT107I	GGYRCC	1 cut(s)	1799
BsrGI	TGTACA	2 cut(s)	1342, 1383
BsrI	ACTGG	7 cut(s)	332, 574, 710, 1279, 1285, 1399, 1954
BssECI	CCNNGG	4 cut(s)	393, 1634, 1836, 1911
BssNAI	GTATAC	1 cut(s)	1286
BssNI	GRCGYC	1 cut(s)	180
BssSI	CACGAG	1 cut(s)	756
BssT1I	CCWWGG	3 cut(s)	393, 1634, 1836
Bst1107I	GTATAC	1 cut(s)	1286
Bst2BI	CACGAG	1 cut(s)	756
Bst2UI	CCWGG	5 cut(s)	103, 1307, 1440, 1863, 1913
Bst4CI	ACNGT	4 cut(s)	356, 1057, 1429, 1747
Bst6I	CTCTTC	2 cut(s)	369, 990
BstACI	GRCGYC	1 cut(s)	180
BstAPI	GCANNNNNTGC	2 cut(s)	156, 677
BstAUI	TGTACA	2 cut(s)	1342, 1383
BstBI	TTCGAA	1 cut(s)	78
BstC8I	GCNNGC	5 cut(s)	152, 222, 740, 1095, 1141
BstDEI	CTNAG	8 cut(s)	119, 323, 413, 744, 1032, 1324, 1553, 1817
BstDSI	CCRYGG	1 cut(s)	1634
BstEII	GGTNACC	2 cut(s)	1179, 1301
BstF5I	GGATG	4 cut(s)	732, 853, 1457, 1615
BstFNI	CGCG	1 cut(s)	169
BstH2I	RGCGCY	2 cut(s)	100, 410
BstHHI	GCGC	5 cut(s)	99, 171, 400, 409, 511
BstMAI	GTCTC	6 cut(s)	443, 755, 887, 989, 1152, 1813
BstNI	CCWGG	5 cut(s)	103, 1307, 1440, 1863, 1913
BstNSI	RCATGY	2 cut(s)	154, 1937
BstPI	GGTNACC	2 cut(s)	1179, 1301
BstSCI	CCNGG	7 cut(s)	101, 273, 489, 1305, 1438, 1861, 1911
BstSFI	CTRYAG	1 cut(s)	1746
BstUI	CGCG	1 cut(s)	169
BstV1I	GCAGC	8 cut(s)	223, 601, 604, 991, 1006, 1093, 1722, 1928
BstV2I	GAAGAC	4 cut(s)	48, 686, 1111, 1495
BstX2I	RGATCY	4 cut(s)	237, 879, 1260, 1498
BstXI	CCANNNNNNTGG	1 cut(s)	1635
BstYI	RGATCY	4 cut(s)	237, 879, 1260, 1498
BstZ17I	GTATAC	1 cut(s)	1286
Bsu36I	CCTNAGG	1 cut(s)	744
BsuRI	GGCC	2 cut(s)	106, 742
BtgI	CCRYGG	1 cut(s)	1634
BtgZI	GCGATG	1 cut(s)	1053
BtrI	CACGTC	1 cut(s)	139
BtsCI	GGATG	4 cut(s)	732, 853, 1457, 1615
BtsIMutI	CAGTG	3 cut(s)	528, 621, 1278
BveI	ACCTGC	2 cut(s)	502, 613
Cac8I	GCNNGC	5 cut(s)	152, 222, 740, 1095, 1141
CaiI	CAGNNNCTG	1 cut(s)	1004
CciI	TCATGA	1 cut(s)	1958
CfoI	GCGC	5 cut(s)	99, 171, 400, 409, 511
Cfr13I	GGNCC	5 cut(s)	86, 105, 1128, 1309, 1952
CseI	GACGC	2 cut(s)	112, 169
CsiI	ACCWGGT	1 cut(s)	1305
Csp6I	GTAC	3 cut(s)	1087, 1343, 1384
CviAII	CATG	8 cut(s)	151, 257, 832, 1462, 1635, 1850, 1934, 1959
CviQI	GTAC	3 cut(s)	1087, 1343, 1384
DdeI	CTNAG	8 cut(s)	119, 323, 413, 744, 1032, 1324, 1553, 1817
DraI	TTTAAA	1 cut(s)	1689
DrdI	GACNNNNNNGTC	2 cut(s)	52, 278
DseDI	GACNNNNNNGTC	2 cut(s)	52, 278
Eam1104I	CTCTTC	2 cut(s)	369, 990
EarI	CTCTTC	2 cut(s)	369, 990
EciI	GGCGGA	2 cut(s)	461, 515
Eco130I	CCWWGG	3 cut(s)	393, 1634, 1836
Eco147I	AGGCCT	1 cut(s)	742
Eco24I	GRGCYC	2 cut(s)	985, 1857
Eco32I	GATATC	1 cut(s)	1517
Eco47I	GGWCC	4 cut(s)	86, 1128, 1309, 1952
Eco47III	AGCGCT	1 cut(s)	98
Eco81I	CCTNAGG	1 cut(s)	744
Eco91I	GGTNACC	2 cut(s)	1179, 1301
EcoO109I	RGGNCCY	3 cut(s)	86, 105, 1309
EcoO65I	GGTNACC	2 cut(s)	1179, 1301
EcoRII	CCWGG	5 cut(s)	101, 1305, 1438, 1861, 1911
EcoRV	GATATC	1 cut(s)	1517
EcoT14I	CCWWGG	3 cut(s)	393, 1634, 1836
EcoT22I	ATGCAT	1 cut(s)	1939
EcoT38I	GRGCYC	2 cut(s)	985, 1857
ErhI	CCWWGG	3 cut(s)	393, 1634, 1836
Esp3I	CGTCTC	1 cut(s)	443
FaeI	CATG	8 cut(s)	154, 260, 835, 1465, 1638, 1853, 1937, 1962
FalI	AAGNNNNNCTT	2 cut(s)	1307, 1339
FaqI	GGGAC	4 cut(s)	99, 110, 1295, 1909
FatI	CATG	8 cut(s)	150, 256, 831, 1461, 1634, 1849, 1933, 1958
FauI	CCCGC	3 cut(s)	139, 460, 1706
FbaI	TGATCA	1 cut(s)	204
FblI	GTMKAC	1 cut(s)	1285
FokI	GGATG	4 cut(s)	739, 840, 1444, 1602
FriOI	GRGCYC	2 cut(s)	985, 1857
FspBI	CTAG	2 cut(s)	297, 1830
GlaI	GCGC	5 cut(s)	98, 170, 399, 408, 510
GsaI	CCCAGC	1 cut(s)	1235
GsuI	CTGGAG	4 cut(s)	85, 200, 315, 1405
HaeII	RGCGCY	2 cut(s)	100, 410
HaeIII	GGCC	2 cut(s)	106, 742
HapII	CCGG	5 cut(s)	195, 228, 274, 490, 1264
HgaI	GACGC	2 cut(s)	112, 169
HhaI	GCGC	5 cut(s)	99, 171, 400, 409, 511
Hin1I	GRCGYC	1 cut(s)	180
Hin1II	CATG	8 cut(s)	154, 260, 835, 1465, 1638, 1853, 1937, 1962
Hin6I	GCGC	5 cut(s)	97, 169, 398, 407, 509
HinP1I	GCGC	5 cut(s)	97, 169, 398, 407, 509
HincII	GTYRAC	2 cut(s)	715, 1467
HindII	GTYRAC	2 cut(s)	715, 1467
HpaI	GTTAAC	1 cut(s)	1467
HpaII	CCGG	5 cut(s)	195, 228, 274, 490, 1264
HphI	GGTGA	2 cut(s)	1173, 1313
Hpy166II	GTNNAC	4 cut(s)	707, 715, 1286, 1467
Hpy8I	GTNNAC	4 cut(s)	707, 715, 1286, 1467
Hpy99I	CGWCG	3 cut(s)	49, 143, 284
HpyCH4III	ACNGT	4 cut(s)	356, 1057, 1429, 1747
HpyCH4IV	ACGT	1 cut(s)	138
HpyCH4V	TGCA	6 cut(s)	1007, 1064, 1193, 1372, 1849, 1937
HpyF3I	CTNAG	8 cut(s)	119, 323, 413, 744, 1032, 1324, 1553, 1817
HpySE526I	ACGT	1 cut(s)	138
Hsp92I	GRCGYC	1 cut(s)	180
Hsp92II	CATG	8 cut(s)	154, 260, 835, 1465, 1638, 1853, 1937, 1962
HspAI	GCGC	5 cut(s)	97, 169, 398, 407, 509
KflI	GGGWCCC	1 cut(s)	86
Kpn2I	TCCGGA	1 cut(s)	1263
Ksp22I	TGATCA	1 cut(s)	204
KspAI	GTTAAC	1 cut(s)	1467
LguI	GCTCTTC	1 cut(s)	990
LmnI	GCTCC	7 cut(s)	104, 219, 230, 298, 314, 1449, 1716
Lsp1109I	GCAGC	8 cut(s)	223, 601, 604, 991, 1006, 1093, 1722, 1928
LweI	GCATC	4 cut(s)	180, 1073, 1366, 1649
MabI	ACCWGGT	1 cut(s)	1305
MaeI	CTAG	2 cut(s)	297, 1830
MaeII	ACGT	1 cut(s)	138
MaeIII	GTNAC	4 cut(s)	1179, 1301, 1401, 1732
MboII	GAAGA	9 cut(s)	48, 260, 386, 565, 686, 977, 1111, 1455, 1500
MflI	RGATCY	4 cut(s)	237, 879, 1260, 1498
MhlI	GDGCHC	2 cut(s)	985, 1857
MluCI	AATT	7 cut(s)	579, 814, 954, 1050, 1453, 1572, 1804
MlyI	GAGTC	3 cut(s)	757, 1154, 1485
MmeI	TCCRAC	2 cut(s)	90, 1648
Mph1103I	ATGCAT	1 cut(s)	1939
MroI	TCCGGA	1 cut(s)	1263
MseI	TTAA	4 cut(s)	813, 1049, 1466, 1688
MspA1I	CMGCKG	1 cut(s)	1713
MspI	CCGG	5 cut(s)	195, 228, 274, 490, 1264
MspR9I	CCNGG	7 cut(s)	103, 275, 491, 1307, 1440, 1863, 1913
Mva1269I	GAATGC	1 cut(s)	1937
MvaI	CCWGG	5 cut(s)	103, 1307, 1440, 1863, 1913
MvnI	CGCG	1 cut(s)	169
NciI	CCSGG	2 cut(s)	275, 491
NcoI	CCATGG	1 cut(s)	1634
NlaIII	CATG	8 cut(s)	154, 260, 835, 1465, 1638, 1853, 1937, 1962
NmuCI	GTSAC	3 cut(s)	1179, 1301, 1732
NsiI	ATGCAT	1 cut(s)	1939
NspI	RCATGY	2 cut(s)	154, 1937
NspV	TTCGAA	1 cut(s)	78
PaeI	GCATGC	1 cut(s)	154
PagI	TCATGA	1 cut(s)	1958
PceI	AGGCCT	1 cut(s)	742
PciSI	GCTCTTC	1 cut(s)	990
PcsI	WCGNNNNNNNCGW	1 cut(s)	633
PctI	GAATGC	1 cut(s)	1937
PfeI	GAWTC	8 cut(s)	62, 243, 263, 430, 922, 1072, 1079, 1504
PflFI	GACNNNGTC	3 cut(s)	52, 275, 1307
PflMI	CCANNNNNTGG	1 cut(s)	318
PfoI	TCCNGGA	2 cut(s)	1438, 1861
PleI	GAGTC	3 cut(s)	757, 1154, 1485
PpsI	GAGTC	3 cut(s)	757, 1154, 1485
PpuMI	RGGWCCY	2 cut(s)	86, 1309
PshBI	ATTAAT	1 cut(s)	1049
Psp5II	RGGWCCY	2 cut(s)	86, 1309
Psp6I	CCWGG	5 cut(s)	101, 1305, 1438, 1861, 1911
PspEI	GGTNACC	2 cut(s)	1179, 1301
PspFI	CCCAGC	1 cut(s)	1231
PspGI	CCWGG	5 cut(s)	101, 1305, 1438, 1861, 1911
PspPI	GGNCC	5 cut(s)	86, 105, 1128, 1309, 1952
PspPPI	RGGWCCY	2 cut(s)	86, 1309
PstNI	CAGNNNCTG	1 cut(s)	1004
PsuI	RGATCY	4 cut(s)	237, 879, 1260, 1498
PsyI	GACNNNGTC	3 cut(s)	52, 275, 1307
RsaI	GTAC	3 cut(s)	1088, 1344, 1385
RsaNI	GTAC	3 cut(s)	1087, 1343, 1384
SapI	GCTCTTC	1 cut(s)	990
SaqAI	TTAA	4 cut(s)	813, 1049, 1466, 1688
Sau96I	GGNCC	5 cut(s)	86, 105, 1128, 1309, 1952
SchI	GAGTC	3 cut(s)	757, 1154, 1485
ScrFI	CCNGG	7 cut(s)	103, 275, 491, 1307, 1440, 1863, 1913
SduI	GDGCHC	2 cut(s)	985, 1857
SexAI	ACCWGGT	1 cut(s)	1305
SfaNI	GCATC	4 cut(s)	180, 1073, 1366, 1649
SfcI	CTRYAG	1 cut(s)	1746
SfuI	TTCGAA	1 cut(s)	78
SinI	GGWCC	4 cut(s)	86, 1128, 1309, 1952
SmlI	CTYRAG	4 cut(s)	890, 1123, 1162, 1493
SmoI	CTYRAG	4 cut(s)	890, 1123, 1162, 1493
SphI	GCATGC	1 cut(s)	154
Sse9I	AATT	7 cut(s)	579, 814, 954, 1050, 1453, 1572, 1804
SseBI	AGGCCT	1 cut(s)	742
SspI	AATATT	1 cut(s)	1390
SspMI	CTAG	2 cut(s)	297, 1830
StuI	AGGCCT	1 cut(s)	742
StyD4I	CCNGG	7 cut(s)	101, 273, 489, 1305, 1438, 1861, 1911
StyI	CCWWGG	3 cut(s)	393, 1634, 1836
TaaI	ACNGT	4 cut(s)	356, 1057, 1429, 1747
TaiI	ACGT	1 cut(s)	141
TaqI	TCGA	6 cut(s)	44, 78, 246, 261, 423, 636
TasI	AATT	7 cut(s)	579, 814, 954, 1050, 1453, 1572, 1804
TatI	WGTACW	2 cut(s)	1342, 1383
TauI	GCSGC	5 cut(s)	180, 363, 446, 467, 509
TfiI	GAWTC	8 cut(s)	62, 243, 263, 430, 922, 1072, 1079, 1504
Tru1I	TTAA	4 cut(s)	813, 1049, 1466, 1688
Tru9I	TTAA	4 cut(s)	813, 1049, 1466, 1688
TscAI	CASTG	3 cut(s)	528, 628, 1285
TseFI	GTSAC	3 cut(s)	1179, 1301, 1732
TseI	GCWGC	8 cut(s)	211, 614, 617, 1004, 1019, 1106, 1710, 1916
Tsp45I	GTSAC	3 cut(s)	1179, 1301, 1732
TspDTI	ATGAA	7 cut(s)	842, 1056, 1197, 1350, 1446, 1920, 1930
TspGWI	ACGGA	1 cut(s)	1120
TspRI	CASTG	3 cut(s)	528, 628, 1285
Tth111I	GACNNNGTC	3 cut(s)	52, 275, 1307
Van91I	CCANNNNNTGG	1 cut(s)	318
VpaK11BI	GGWCC	4 cut(s)	86, 1128, 1309, 1952
VspI	ATTAAT	1 cut(s)	1049
XceI	RCATGY	2 cut(s)	154, 1937
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1632
XmiI	GTMKAC	1 cut(s)	1285
XspI	CTAG	2 cut(s)	297, 1830
Zsp2I	ATGCAT	1 cut(s)	1939

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.