Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0002957

Physical Location & Seq

Genomic Coordinates Forward (+)

41981716 .. 41986845

Gene Structure 5130 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00197640.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1788 bp

ATGGGAAGCACCTTTCTCTCTCTACCAGCGAAGCGTTCAATTTCTTCGACAATGTCCTCCTATTCCTCCGAGCCCAGCTTAGAAAACGGATCCTCCAAGCGCTCCAGGTCGCGCCAGCAGCAGGCTCCGCTCACTGTTCCTCCCGGCCACGTCGCCTTCCGCATGCTCTGCCACGCCTCCCGCATCGGCGGCGTCATCGGCAAGTCCGGCACCGTCATCAAGCAGCTCCAGCAGGCCACCGGCGCAAAGATCAGAATCGAGGAGCCGCCCCAACTCGACTCGCCGGACCGGGTCGTCGTCGTCATCGCTCCCAGCGCAATCCGGTCCAAGATTGCGCTCAGTGGAGACCAAGAGATTGAGGTTTCCAAGGCGCAAGAGGCGCTTTTGAGAGTGTTCGAGAGGATTCTAGAGGTGGCGGCGGAGACCGGAGCGATAGGAGTAGGGGTAGGAGTGGTGTCTTGCCGGTTTCTGGCGGAGACGGCGCAGGTCGGCTCGGTGATAGGCAAGGGCGGCAAGGTGGTGGAGAAGATTAGAAAAGAGACTGGCTGTAAAATTAGGGTCTTGAATGAGAAATTGCCCGTTTGTGCTGCTCCTTCTGACGAGATGGTAGAGATAGAAGGGGATATTTTGGCTGTAAAGAAAGCACTTGTTGCTGTCTCCGGCCGTCTTCAAGATTGTCCACCAGTTGACAAGACAAGGATGACTGGAAGTAGGCCTATTGAGACAGTTCCTTGTGAAACTTTACCTGATATTCGTGTAGATCACCTTTCACAGAGGAACTCAGTGATTTCCAATTTGCCGAGCAGCTCCATGAGTTATGCTTCAGGAGTTCGGTTGGGGGTGTCATTGGAAAAGGGGGGTGCCATTGTCAGGGCTCTTCAGAATGAGACTGGTGCTACTATAAGTGTTGGAGGATCTGTGGCCGAGTGTGATGAAAGATTAATTACTGTTACTGCATCAGAGAATCCTGAGTCCCGCTATTCACCAGCACAAAAGGGTCTTGTTCTTGTCTTCTCAAGGTCTGTAGAGGCAGGCATTGAAAAGGGGCAAGACTTGAGCTCCAAAGGGTCACCTCTTATTGCACGCCTTGTTGTCCCGACCAGCCAAGTTGGTTGTGGTGACCAGGTCCCGAAGTGTGCCTTAGAGAATGACGAAGTTGTACAGGTTTCAGGAAATTTTTCAAGTGTGCAAGATGCTTTGTACAATATTACTGGTAGGTTACGAGATAACCTTTTCTCCAACACAGTAAATAATTCTGGAAGGAGGAATAGTTCAGCCGTGCTAACAGATACCAGTCCTTATGGAAGACTCAGGGATCCTGCTCCTACTGGATTTCAGCCTTCTTCATCAGTTGGTGTTACTCATGGTCTCGGTCGACATACTACTCTAGCTCAAAGTATGGATCATCTTGGACTTTCCCATAATTTAGATCATCCTTCTTCACCAAGGCCATGGGCATCACAGATGGTTGCTCCAAGGGGAATCTCAGATACTGGCAGGGGTTTGCCTTCTCTTAATAGTGGCTCGGATCTTGGCAGTGGAAGCAAATCTGCCATCGTGACAAATACAACTGTAGAGATCATAGTTCCTGAAAATGTTGTTGGCTCAGTGTACGGAGAGAATGGCACCAATTTGGCTCGACTGAGACAGATTTCCGGTGCCAAGGTCATAGTGCATGAACCCCGTCCCGGAACAACTGATAGGATTATTGTCATATCTGGGACACCTGACGAAACCCAGGCAGCACAGAGCCTCCTCCACGCATTCATTCTCACCGGGCCATCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0007275 GO:0008150 GO:0009791 GO:0009908 GO:0009909 GO:0009911 GO:0016604 GO:0016607 GO:0022414 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045595 GO:0045596 GO:0048367 GO:0048437 GO:0048497 GO:0048518 GO:0048519 GO:0048523 GO:0048580 GO:0048582 GO:0048608 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051093 GO:0051094 GO:0051239 GO:0051240 GO:0061458 GO:0065007 GO:0070013 GO:0090567 GO:0090700 GO:0099402 GO:2000026 GO:2000241 GO:2000243

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

KH_1

Protein Analysis

595

Amino Acids

62.6

Weight (kDa)

8.65

Isoelectric Point (pI)

48.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
KH_1	PF00013	53 - 105	1.1e-12	KH domain
KH_1	PF00013	154 - 219	1.7e-13	KH domain
KH_1	PF00013	524 - 587	3.9e-14	KH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002957)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G64390 AT5G64390 AT5G64390
fragaria_vesca	FvH4_2g11560 FvH4_2g11560 FvH4_2g11560
malus_domestica	MD05G1048400.v1.1 MD10G1054800.v1.1
prunus_persica	Prupe.8G070900_v2.0.a1
pyrus_communis	pycom05g04000 pycom10g04180
rosa_chinensis	RchiOBHm_Chr1g0353311 RchiOBHm_Chr4g0385021 RchiOBHm_Chr6g0270731 RchiOBHm_Chr6g0272811
rosa_laevigata	RLG00000013774
rosa_multiflora	Rmu_co8284529.1_g000001 Rmu_sc0000642.1_g000012 Rmu_sc0041041.1_g000001
rosa_roxburghii	Rroxscaffold_2G00085770 Rroxscaffold_7G00197640
rosa_rugosa	Rorug06G0056000 Rorug06G0056100 Rorug06G0056200
rosa_samantha	Rh2DG204000 Rh4CG002400 Rh4CG168900 Rh6AG157400 Rh6AG175200 Rh6BG140200 Rh6BG178600 Rh6CG174800 Rh6DG123600 Rh6DG167400 Rh6DG180500 Rh7AG209600 Rh7CG359700
rosa_wichuraiana	Rw6G014930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	293
Acc36I	ACCTGC	1 cut(s)	475
AccB1I	GGYRCC	4 cut(s)	209, 860, 1625, 1658
AccBSI	CCGCTC	1 cut(s)	130
AccI	GTMKAC	1 cut(s)	1375
AccII	CGCG	1 cut(s)	112
AclWI	GGATC	7 cut(s)	84, 97, 922, 1310, 1323, 1410, 1536
AcoI	YGGCCR	3 cut(s)	145, 661, 921
AcsI	RAATTY	1 cut(s)	1174
AcuI	CTGAAG	2 cut(s)	807, 863
AcyI	GRCGYC	1 cut(s)	192
AfaI	GTAC	3 cut(s)	1161, 1202, 1613
AfeI	AGCGCT	1 cut(s)	101
AfiI	CCNNNNNNNGG	4 cut(s)	121, 469, 870, 1688
AgsI	TTSAA	5 cut(s)	39, 565, 671, 1040, 1182
AjiI	CACGTC	1 cut(s)	151
AjnI	CCWGG	3 cut(s)	104, 1122, 1737
AjuI	GAANNNNNNNTTGG	2 cut(s)	1584, 1616
AloI	GAACNNNNNNTCC	2 cut(s)	1255, 1287
AluBI	AGCT	5 cut(s)	78, 226, 807, 1059, 1391
AluI	AGCT	5 cut(s)	78, 226, 807, 1059, 1391
Alw21I	GWGCWC	1 cut(s)	1061
Alw26I	GTCTC	9 cut(s)	339, 416, 470, 533, 661, 716, 881, 1373, 1639
AlwI	GGATC	7 cut(s)	84, 97, 922, 1310, 1323, 1410, 1536
AlwNI	CAGNNNCTG	1 cut(s)	1493
Aor51HI	AGCGCT	1 cut(s)	101
AoxI	GGCC	7 cut(s)	145, 234, 661, 713, 921, 1448, 1778
ApeKI	GCWGC	5 cut(s)	118, 223, 587, 804, 1742
ApoI	RAATTY	1 cut(s)	1174
AseI	ATTAAT	1 cut(s)	941
Asp700I	GAANNNNTTC	1 cut(s)	1177
AspLEI	GCGC	8 cut(s)	102, 114, 245, 317, 337, 373, 382, 484
AspS9I	GGNCC	4 cut(s)	286, 324, 1126, 1778
AsuC2I	CCSGG	4 cut(s)	144, 290, 1689, 1777
AsuHPI	GGTGA	7 cut(s)	508, 755, 975, 1062, 1130, 1434, 1765
AvaII	GGWCC	3 cut(s)	286, 324, 1126
BamHI	GGATCC	2 cut(s)	89, 1315
BanI	GGYRCC	4 cut(s)	209, 860, 1625, 1658
BanII	GRGCYC	3 cut(s)	75, 877, 1061
BbsI	GAAGAC	3 cut(s)	659, 1003, 1312
Bbv12I	GWGCWC	1 cut(s)	1061
BbvI	GCAGC	5 cut(s)	130, 235, 574, 816, 1754
BccI	CCATC	3 cut(s)	598, 1459, 1562
BceAI	ACGGC	3 cut(s)	495, 648, 1262
BciT130I	CCWGG	3 cut(s)	106, 1124, 1739
BcnI	CCSGG	4 cut(s)	144, 290, 1689, 1777
BcoDI	GTCTC	9 cut(s)	339, 416, 470, 533, 661, 716, 881, 1373, 1639
BfaI	CTAG	2 cut(s)	407, 1388
BfmI	CTRYAG	2 cut(s)	1023, 1572
BfoI	RGCGCY	2 cut(s)	103, 383
BfuAI	ACCTGC	1 cut(s)	475
BisI	GCNGC	9 cut(s)	119, 190, 224, 266, 417, 511, 588, 805, 1743
BlsI	GCNGC	9 cut(s)	120, 191, 225, 267, 418, 512, 589, 806, 1744
Bme1390I	CCNGG	7 cut(s)	106, 144, 290, 1124, 1689, 1739, 1777
Bme18I	GGWCC	3 cut(s)	286, 324, 1126
BmgBI	CACGTC	1 cut(s)	151
BmgT120I	GGNCC	4 cut(s)	286, 324, 1126, 1778
BmiI	GGNNCC	9 cut(s)	91, 126, 211, 264, 862, 1128, 1317, 1627, 1660
BmrFI	CCNGG	7 cut(s)	106, 144, 290, 1124, 1689, 1739, 1777
BmsI	GCATC	4 cut(s)	192, 965, 1183, 1466
BpiI	GAAGAC	3 cut(s)	659, 1003, 1312
BpmI	CTGGAG	2 cut(s)	88, 212
BpuEI	CTTGAG	2 cut(s)	1000, 1075
BpuMI	CCSGG	4 cut(s)	144, 290, 1689, 1777
BsaBI	GATNNNNATC	1 cut(s)	254
BsaHI	GRCGYC	1 cut(s)	192
BsaI	GGTCTC	3 cut(s)	339, 416, 1373
BsaJI	CCNNGG	6 cut(s)	366, 1445, 1451, 1475, 1662, 1737
BsaWI	WCCGGW	3 cut(s)	321, 425, 1655
Bsc4I	CCNNNNNNNGG	4 cut(s)	121, 469, 870, 1688
Bse118I	RCCGGY	2 cut(s)	239, 462
Bse1I	ACTGG	8 cut(s)	547, 683, 709, 895, 1216, 1293, 1333, 1498
Bse8I	GATNNNNATC	1 cut(s)	254
BseBI	CCWGG	3 cut(s)	106, 1124, 1739
BseDI	CCNNGG	6 cut(s)	366, 1445, 1451, 1475, 1662, 1737
BseGI	GGATG	2 cut(s)	705, 1432
BseJI	GATNNNNATC	1 cut(s)	254
BseLI	CCNNNNNNNGG	4 cut(s)	121, 469, 870, 1688
BseMII	CTCAG	7 cut(s)	352, 795, 960, 1324, 1500, 1620, 1634
BseNI	ACTGG	8 cut(s)	547, 683, 709, 895, 1216, 1293, 1333, 1498
BseRI	GAGGAG	2 cut(s)	275, 1745
BseX3I	CGGCCG	1 cut(s)	661
BseXI	GCAGC	5 cut(s)	130, 235, 574, 816, 1754
BseYI	CCCAGC	2 cut(s)	74, 311
Bsh1236I	CGCG	1 cut(s)	112
Bsh1285I	CGRYCG	2 cut(s)	664, 1375
BshFI	GGCC	7 cut(s)	147, 236, 663, 715, 923, 1450, 1780
BshNI	GGYRCC	4 cut(s)	209, 860, 1625, 1658
BsiEI	CGRYCG	2 cut(s)	664, 1375
BsiHKAI	GWGCWC	1 cut(s)	1061
BslFI	GGGAC	5 cut(s)	958, 1079, 1112, 1671, 1735
BslI	CCNNNNNNNGG	4 cut(s)	121, 469, 870, 1688
BsmAI	GTCTC	9 cut(s)	339, 416, 470, 533, 661, 716, 881, 1373, 1639
BsmBI	CGTCTC	1 cut(s)	470
BsmFI	GGGAC	5 cut(s)	958, 1079, 1112, 1671, 1735
BsmI	GAATGC	1 cut(s)	1763
BsnI	GGCC	7 cut(s)	147, 236, 663, 715, 923, 1450, 1780
Bso31I	GGTCTC	3 cut(s)	339, 416, 1373
Bsp1286I	GDGCHC	3 cut(s)	75, 877, 1061
Bsp1407I	TGTACA	2 cut(s)	1159, 1200
Bsp143I	GATC	9 cut(s)	89, 249, 760, 914, 1315, 1402, 1429, 1528, 1578
Bsp19I	CCATGG	1 cut(s)	1451
BspANI	GGCC	7 cut(s)	147, 236, 663, 715, 923, 1450, 1780
BspCNI	CTCAG	7 cut(s)	351, 794, 961, 1323, 1499, 1619, 1635
BspFNI	CGCG	1 cut(s)	112
BspHI	TCATGA	1 cut(s)	1784
BspLI	GGNNCC	9 cut(s)	91, 126, 211, 264, 862, 1128, 1317, 1627, 1660
BspMI	ACCTGC	1 cut(s)	475
BspPI	GGATC	7 cut(s)	84, 97, 922, 1310, 1323, 1410, 1536
BspQI	GCTCTTC	1 cut(s)	882
BspT107I	GGYRCC	4 cut(s)	209, 860, 1625, 1658
BspTNI	GGTCTC	3 cut(s)	339, 416, 1373
BsrBI	CCGCTC	1 cut(s)	130
BsrFI	RCCGGY	2 cut(s)	239, 462
BsrGI	TGTACA	2 cut(s)	1159, 1200
BsrI	ACTGG	8 cut(s)	547, 683, 709, 895, 1216, 1293, 1333, 1498
BssAI	RCCGGY	2 cut(s)	239, 462
BssECI	CCNNGG	6 cut(s)	366, 1445, 1451, 1475, 1662, 1737
BssMI	GATC	9 cut(s)	89, 249, 760, 914, 1315, 1402, 1429, 1528, 1578
BssNI	GRCGYC	1 cut(s)	192
BssT1I	CCWWGG	5 cut(s)	366, 1445, 1451, 1475, 1662
Bst2UI	CCWGG	3 cut(s)	106, 1124, 1739
Bst4CI	ACNGT	6 cut(s)	136, 214, 727, 949, 1246, 1573
Bst6I	CTCTTC	1 cut(s)	882
BstACI	GRCGYC	1 cut(s)	192
BstAPI	GCANNNNNTGC	2 cut(s)	168, 650
BstAUI	TGTACA	2 cut(s)	1159, 1200
BstC8I	GCNNGC	6 cut(s)	116, 123, 164, 234, 1033, 1084
BstDEI	CTNAG	9 cut(s)	79, 338, 781, 969, 1141, 1310, 1486, 1606, 1643
BstDSI	CCRYGG	1 cut(s)	1451
BstEII	GGTNACC	2 cut(s)	1068, 1118
BstF5I	GGATG	2 cut(s)	705, 1432
BstFNI	CGCG	1 cut(s)	112
BstH2I	RGCGCY	2 cut(s)	103, 383
BstHHI	GCGC	8 cut(s)	102, 114, 245, 317, 337, 373, 382, 484
BstKTI	GATC	9 cut(s)	92, 252, 763, 917, 1318, 1405, 1432, 1531, 1581
BstMAI	GTCTC	9 cut(s)	339, 416, 470, 533, 661, 716, 881, 1373, 1639
BstMBI	GATC	9 cut(s)	89, 249, 760, 914, 1315, 1402, 1429, 1528, 1578
BstMCI	CGRYCG	2 cut(s)	664, 1375
BstNI	CCWGG	3 cut(s)	106, 1124, 1739
BstNSI	RCATGY	1 cut(s)	166
BstPI	GGTNACC	2 cut(s)	1068, 1118
BstSCI	CCNGG	7 cut(s)	104, 142, 288, 1122, 1687, 1737, 1775
BstSFI	CTRYAG	2 cut(s)	1023, 1572
BstUI	CGCG	1 cut(s)	112
BstV1I	GCAGC	5 cut(s)	130, 235, 574, 816, 1754
BstV2I	GAAGAC	3 cut(s)	659, 1003, 1312
BstX2I	RGATCY	4 cut(s)	89, 914, 1315, 1528
BstXI	CCANNNNNNTGG	1 cut(s)	1452
BstYI	RGATCY	4 cut(s)	89, 914, 1315, 1528
BstZI	CGGCCG	1 cut(s)	661
BsuRI	GGCC	7 cut(s)	147, 236, 663, 715, 923, 1450, 1780
BtgI	CCRYGG	1 cut(s)	1451
BtgZI	GCGATG	1 cut(s)	289
BtrI	CACGTC	1 cut(s)	151
BtsCI	GGATG	2 cut(s)	705, 1432
BtsI	GCAGTG	1 cut(s)	1543
BtsIMutI	CAGTG	5 cut(s)	132, 346, 789, 1543, 1614
BveI	ACCTGC	1 cut(s)	475
Cac8I	GCNNGC	6 cut(s)	116, 123, 164, 234, 1033, 1084
CaiI	CAGNNNCTG	1 cut(s)	1493
CciI	TCATGA	1 cut(s)	1784
CfoI	GCGC	8 cut(s)	102, 114, 245, 317, 337, 373, 382, 484
Cfr10I	RCCGGY	2 cut(s)	239, 462
Cfr13I	GGNCC	4 cut(s)	286, 324, 1126, 1778
CpoI	CGGWCCG	1 cut(s)	286
CseI	GACGC	1 cut(s)	181
CsiI	ACCWGGT	1 cut(s)	1122
Csp6I	GTAC	3 cut(s)	1160, 1201, 1612
CspI	CGGWCCG	1 cut(s)	286
CviAII	CATG	6 cut(s)	163, 811, 1364, 1452, 1676, 1785
CviQI	GTAC	3 cut(s)	1160, 1201, 1612
DdeI	CTNAG	9 cut(s)	79, 338, 781, 969, 1141, 1310, 1486, 1606, 1643
DpnI	GATC	9 cut(s)	91, 251, 762, 916, 1317, 1404, 1431, 1530, 1580
DpnII	GATC	9 cut(s)	89, 249, 760, 914, 1315, 1402, 1429, 1528, 1578
DrdI	GACNNNNNNGTC	1 cut(s)	293
DseDI	GACNNNNNNGTC	1 cut(s)	293
EaeI	YGGCCR	3 cut(s)	145, 661, 921
EagI	CGGCCG	1 cut(s)	661
Eam1104I	CTCTTC	1 cut(s)	882
EarI	CTCTTC	1 cut(s)	882
EciI	GGCGGA	2 cut(s)	434, 488
Ecl136II	GAGCTC	1 cut(s)	1059
EclXI	CGGCCG	1 cut(s)	661
Eco130I	CCWWGG	5 cut(s)	366, 1445, 1451, 1475, 1662
Eco147I	AGGCCT	1 cut(s)	715
Eco24I	GRGCYC	3 cut(s)	75, 877, 1061
Eco31I	GGTCTC	3 cut(s)	339, 416, 1373
Eco47I	GGWCC	3 cut(s)	286, 324, 1126
Eco47III	AGCGCT	1 cut(s)	101
Eco52I	CGGCCG	1 cut(s)	661
Eco53kI	GAGCTC	1 cut(s)	1059
Eco57I	CTGAAG	2 cut(s)	807, 863
Eco91I	GGTNACC	2 cut(s)	1068, 1118
EcoICRI	GAGCTC	1 cut(s)	1059
EcoO109I	RGGNCCY	1 cut(s)	1126
EcoO65I	GGTNACC	2 cut(s)	1068, 1118
EcoRII	CCWGG	3 cut(s)	104, 1122, 1737
EcoT14I	CCWWGG	5 cut(s)	366, 1445, 1451, 1475, 1662
EcoT38I	GRGCYC	3 cut(s)	75, 877, 1061
ErhI	CCWWGG	5 cut(s)	366, 1445, 1451, 1475, 1662
Esp3I	CGTCTC	1 cut(s)	470
FaeI	CATG	6 cut(s)	166, 814, 1367, 1455, 1679, 1788
FalI	AAGNNNNNCTT	4 cut(s)	366, 398, 1124, 1156
FaqI	GGGAC	5 cut(s)	958, 1079, 1112, 1671, 1735
FatI	CATG	6 cut(s)	162, 810, 1363, 1451, 1675, 1784
FauI	CCCGC	2 cut(s)	188, 983
FblI	GTMKAC	1 cut(s)	1375
Fnu4HI	GCNGC	9 cut(s)	119, 190, 224, 266, 417, 511, 588, 805, 1743
FokI	GGATG	2 cut(s)	712, 1419
FriOI	GRGCYC	3 cut(s)	75, 877, 1061
Fsp4HI	GCNGC	9 cut(s)	119, 190, 224, 266, 417, 511, 588, 805, 1743
FspBI	CTAG	2 cut(s)	407, 1388
GlaI	GCGC	8 cut(s)	101, 113, 244, 316, 336, 372, 381, 483
GluI	GCNGC	9 cut(s)	119, 190, 224, 266, 417, 511, 588, 805, 1743
GsaI	CCCAGC	2 cut(s)	78, 315
GsuI	CTGGAG	2 cut(s)	88, 212
HaeII	RGCGCY	2 cut(s)	103, 383
HaeIII	GGCC	7 cut(s)	147, 236, 663, 715, 923, 1450, 1780
HgaI	GACGC	1 cut(s)	181
HhaI	GCGC	8 cut(s)	102, 114, 245, 317, 337, 373, 382, 484
Hin1I	GRCGYC	1 cut(s)	192
Hin1II	CATG	6 cut(s)	166, 814, 1367, 1455, 1679, 1788
Hin6I	GCGC	8 cut(s)	100, 112, 243, 315, 335, 371, 380, 482
HinP1I	GCGC	8 cut(s)	100, 112, 243, 315, 335, 371, 380, 482
HincII	GTYRAC	2 cut(s)	688, 1376
HindII	GTYRAC	2 cut(s)	688, 1376
HinfI	GANTC	7 cut(s)	255, 278, 403, 964, 971, 1308, 1482
HphI	GGTGA	7 cut(s)	508, 755, 975, 1062, 1130, 1434, 1765
Hpy166II	GTNNAC	4 cut(s)	680, 688, 1376, 1612
Hpy188I	TCNGA	7 cut(s)	70, 254, 598, 882, 961, 1489, 1528
Hpy8I	GTNNAC	4 cut(s)	680, 688, 1376, 1612
Hpy99I	CGWCG	3 cut(s)	155, 299, 302
HpyAV	CCTTC	7 cut(s)	166, 603, 611, 1254, 1350, 1446, 1518
HpyCH4III	ACNGT	6 cut(s)	136, 214, 727, 949, 1246, 1573
HpyCH4IV	ACGT	1 cut(s)	150
HpyCH4V	TGCA	4 cut(s)	956, 1082, 1189, 1675
HpyF3I	CTNAG	9 cut(s)	79, 338, 781, 969, 1141, 1310, 1486, 1606, 1643
HpySE526I	ACGT	1 cut(s)	150
Hsp92I	GRCGYC	1 cut(s)	192
Hsp92II	CATG	6 cut(s)	166, 814, 1367, 1455, 1679, 1788
HspAI	GCGC	8 cut(s)	100, 112, 243, 315, 335, 371, 380, 482
Kzo9I	GATC	9 cut(s)	89, 249, 760, 914, 1315, 1402, 1429, 1528, 1578
LguI	GCTCTTC	1 cut(s)	882
Lsp1109I	GCAGC	5 cut(s)	130, 235, 574, 816, 1754
LweI	GCATC	4 cut(s)	192, 965, 1183, 1466
MabI	ACCWGGT	1 cut(s)	1122
MaeI	CTAG	2 cut(s)	407, 1388
MaeII	ACGT	1 cut(s)	150
MaeIII	GTNAC	6 cut(s)	949, 1068, 1118, 1218, 1357, 1558
MalI	GATC	9 cut(s)	91, 251, 762, 916, 1317, 1404, 1431, 1530, 1580
MbiI	CCGCTC	1 cut(s)	130
MboI	GATC	9 cut(s)	89, 249, 760, 914, 1315, 1402, 1429, 1528, 1578
MboII	GAAGA	8 cut(s)	36, 538, 659, 869, 1003, 1317, 1335, 1431
MflI	RGATCY	4 cut(s)	89, 914, 1315, 1528
MhlI	GDGCHC	3 cut(s)	75, 877, 1061
MluCI	AATT	9 cut(s)	39, 552, 572, 793, 942, 1174, 1252, 1423, 1630
MlyI	GAGTC	3 cut(s)	272, 980, 1302
MmeI	TCCRAC	2 cut(s)	889, 1263
MroXI	GAANNNNTTC	1 cut(s)	1177
MseI	TTAA	2 cut(s)	941, 1515
MspR9I	CCNGG	7 cut(s)	106, 144, 290, 1124, 1689, 1739, 1777
Mva1269I	GAATGC	1 cut(s)	1763
MvaI	CCWGG	3 cut(s)	106, 1124, 1739
MvnI	CGCG	1 cut(s)	112
NciI	CCSGG	4 cut(s)	144, 290, 1689, 1777
NcoI	CCATGG	1 cut(s)	1451
NdeII	GATC	9 cut(s)	89, 249, 760, 914, 1315, 1402, 1429, 1528, 1578
NlaIII	CATG	6 cut(s)	166, 814, 1367, 1455, 1679, 1788
NlaIV	GGNNCC	9 cut(s)	91, 126, 211, 264, 862, 1128, 1317, 1627, 1660
NmeAIII	GCCGAG	2 cut(s)	825, 949
NmuCI	GTSAC	3 cut(s)	1068, 1118, 1558
NspI	RCATGY	1 cut(s)	166
PaeI	GCATGC	1 cut(s)	166
PagI	TCATGA	1 cut(s)	1784
PceI	AGGCCT	1 cut(s)	715
PciSI	GCTCTTC	1 cut(s)	882
PctI	GAATGC	1 cut(s)	1763
PdmI	GAANNNNTTC	1 cut(s)	1177
PfeI	GAWTC	4 cut(s)	255, 403, 964, 1482
PflFI	GACNNNGTC	3 cut(s)	52, 290, 1124
PfoI	TCCNGGA	1 cut(s)	1687
PkrI	GCNGC	9 cut(s)	120, 191, 225, 267, 418, 512, 589, 806, 1744
PleI	GAGTC	3 cut(s)	272, 979, 1302
PpsI	GAGTC	3 cut(s)	272, 979, 1302
PpuMI	RGGWCCY	1 cut(s)	1126
PshBI	ATTAAT	1 cut(s)	941
Psp124BI	GAGCTC	1 cut(s)	1061
Psp5II	RGGWCCY	1 cut(s)	1126
Psp6I	CCWGG	3 cut(s)	104, 1122, 1737
PspEI	GGTNACC	2 cut(s)	1068, 1118
PspFI	CCCAGC	2 cut(s)	74, 311
PspGI	CCWGG	3 cut(s)	104, 1122, 1737
PspN4I	GGNNCC	9 cut(s)	91, 126, 211, 264, 862, 1128, 1317, 1627, 1660
PspPI	GGNCC	4 cut(s)	286, 324, 1126, 1778
PspPPI	RGGWCCY	1 cut(s)	1126
PstNI	CAGNNNCTG	1 cut(s)	1493
PsuI	RGATCY	4 cut(s)	89, 914, 1315, 1528
PsyI	GACNNNGTC	3 cut(s)	52, 290, 1124
RsaI	GTAC	3 cut(s)	1161, 1202, 1613
RsaNI	GTAC	3 cut(s)	1160, 1201, 1612
Rsr2I	CGGWCCG	1 cut(s)	286
RsrII	CGGWCCG	1 cut(s)	286
SacI	GAGCTC	1 cut(s)	1061
SalI	GTCGAC	1 cut(s)	1374
SapI	GCTCTTC	1 cut(s)	882
SaqAI	TTAA	2 cut(s)	941, 1515
SatI	GCNGC	9 cut(s)	119, 190, 224, 266, 417, 511, 588, 805, 1743
Sau3AI	GATC	9 cut(s)	89, 249, 760, 914, 1315, 1402, 1429, 1528, 1578
Sau96I	GGNCC	4 cut(s)	286, 324, 1126, 1778
SchI	GAGTC	3 cut(s)	272, 980, 1302
ScrFI	CCNGG	7 cut(s)	106, 144, 290, 1124, 1689, 1739, 1777
SduI	GDGCHC	3 cut(s)	75, 877, 1061
SexAI	ACCWGGT	1 cut(s)	1122
SfaNI	GCATC	4 cut(s)	192, 965, 1183, 1466
SfcI	CTRYAG	2 cut(s)	1023, 1572
SgrAI	CRCCGGYG	1 cut(s)	239
SinI	GGWCC	3 cut(s)	286, 324, 1126
SmlI	CTYRAG	2 cut(s)	1015, 1054
SmoI	CTYRAG	2 cut(s)	1015, 1054
SphI	GCATGC	1 cut(s)	166
Sse9I	AATT	9 cut(s)	39, 552, 572, 793, 942, 1174, 1252, 1423, 1630
SseBI	AGGCCT	1 cut(s)	715
SspI	AATATT	1 cut(s)	1207
SspMI	CTAG	2 cut(s)	407, 1388
SstI	GAGCTC	1 cut(s)	1061
StuI	AGGCCT	1 cut(s)	715
StyD4I	CCNGG	7 cut(s)	104, 142, 288, 1122, 1687, 1737, 1775
StyI	CCWWGG	5 cut(s)	366, 1445, 1451, 1475, 1662
TaaI	ACNGT	6 cut(s)	136, 214, 727, 949, 1246, 1573
TaiI	ACGT	1 cut(s)	153
TaqI	TCGA	6 cut(s)	47, 258, 276, 396, 1375, 1639
TaqII	GACCGA	1 cut(s)	1361
TasI	AATT	9 cut(s)	39, 552, 572, 793, 942, 1174, 1252, 1423, 1630
TatI	WGTACW	2 cut(s)	1159, 1200
TauI	GCSGC	4 cut(s)	192, 268, 419, 513
TfiI	GAWTC	4 cut(s)	255, 403, 964, 1482
Tru1I	TTAA	2 cut(s)	941, 1515
Tru9I	TTAA	2 cut(s)	941, 1515
TscAI	CASTG	5 cut(s)	139, 346, 789, 1543, 1614
TseFI	GTSAC	3 cut(s)	1068, 1118, 1558
TseI	GCWGC	5 cut(s)	118, 223, 587, 804, 1742
Tsp45I	GTSAC	3 cut(s)	1068, 1118, 1558
TspDTI	ATGAA	4 cut(s)	948, 1335, 1692, 1756
TspGWI	ACGGA	2 cut(s)	102, 1629
TspRI	CASTG	5 cut(s)	139, 346, 789, 1543, 1614
Tth111I	GACNNNGTC	3 cut(s)	52, 290, 1124
VpaK11BI	GGWCC	3 cut(s)	286, 324, 1126
VspI	ATTAAT	1 cut(s)	941
XapI	RAATTY	1 cut(s)	1174
XbaI	TCTAGA	1 cut(s)	406
XceI	RCATGY	1 cut(s)	166
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1112
XmiI	GTMKAC	1 cut(s)	1375
XmnI	GAANNNNTTC	1 cut(s)	1177
XspI	CTAG	2 cut(s)	407, 1388

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.