Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0002957

Physical Location & Seq

Genomic Coordinates Reverse (-)

18997197 .. 19022292

Gene Structure 25096 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG204000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1248 bp

ATGGCACATTGGGCACCGGCCTCTTGTGCCCGTGGCGCCTGGAGTGACCACGGAGTGTGGAATGGCTCCGGACAGGTGAGTCCTCATGGTTTTGTTCCAATGGAGAAGGATCAGAAGATAGCATCTGAAGACACCAAGGTGGATATGTTCGAGGACGGTGATGAGTTTGAAGAGCTCAACATCAATCTAGGTTATGTTCTGTTCTGTGTCGTGTTTGATGCAATAGAAGGGGATATTTTGGCTGTAAAGAAAGCACTTGTTGCTGTCTCCGGCCGTCTTCAAGATTGTCCACCAGTTGACAAGACAAGGATGACTGGAAGTAGGCCTATTGAGACAGTTCCTCGTGAAACTTTACCTGATATTCGTGTAGATCACCTTTCACAGAGGAACTCAGTGATTTCCAATTTGCCGAGCAGCTCCATGAGTTATGCTTCAGGAGTTTGTCTGCCATCAATAGAGGCTGAAAGGATCTCAACACTGGATACAAGAACACTCCAGCAGGAAGTTACTTTTAAGATTCTTTGCGACAATGATAGGGTTGGGGGTGTCATTGGAAAAGGGGGTGCCATTGTCAAGGCTCTTCAGAATGAGACTGGTGCTACTATAAGTGTTGGAGGATCTGTGGCCGAGTGTGATGAAAGATTAATTACTAATCCTGAGTCCCGCTACTCTCCAGCACAAAAGGGTCTTGTTCTTGTCTTCTCAAGGTCTGTAGAGGCAGGCATTGAAAAGGGGCAAGACTCGAGCTCCAAAGGGTCACCTCTTATTGCAAGCCTTGTTGTCCCGACAAGCCAAGTTGGTGGTGACCAGGTCCCGAAGTGTTCCGTAGAGAATGACGAAGTTGTACAGGTGTCAAGAAATTTTTCAAGTGTGCAAGATGCTTTGTACAATATTACTGGTAGGTTACGAGATAACCTTTTCTCCAACACAGTAAATAATTCTGGAAGGAGGAATAGTTCAGCCGTGCTAACAGATACCAATCCTTATGGAAGACTCAGGGATCCTGCTCCTACTGGATTTCAGCCTTCTTCATCAGTTGGTGTTACTCATGGTCTCGGTCGACATACTACTCTAACTCAAAGTATGGATCATCTTGGACTTTCCCATAATTTAGATCATCCTTCTTCACCAAGGCCATGGGCATCACAGATGGTTGCTCCAAGGGGAATCTCAGATACTAGCAGGGGTTTGACTTCTCTTAAAAGTGGCTCGGATCTTGGTAGGTTAGTAATGTCGCACAATGCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0007275 GO:0008150 GO:0009791 GO:0009908 GO:0009909 GO:0009911 GO:0016604 GO:0016607 GO:0022414 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045595 GO:0045596 GO:0048367 GO:0048437 GO:0048497 GO:0048518 GO:0048519 GO:0048523 GO:0048580 GO:0048582 GO:0048608 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051093 GO:0051094 GO:0051239 GO:0051240 GO:0061458 GO:0065007 GO:0070013 GO:0090567 GO:0090700 GO:0099402 GO:2000026 GO:2000241 GO:2000243

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

KH_1

Protein Analysis

415

Amino Acids

44.43

Weight (kDa)

5.72

Isoelectric Point (pI)

47.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
KH_1	PF00013	170 - 217	2.6e-10	KH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002957)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G64390 AT5G64390 AT5G64390
fragaria_vesca	FvH4_2g11560 FvH4_2g11560 FvH4_2g11560
malus_domestica	MD05G1048400.v1.1 MD10G1054800.v1.1
prunus_persica	Prupe.8G070900_v2.0.a1
pyrus_communis	pycom05g04000 pycom10g04180
rosa_chinensis	RchiOBHm_Chr1g0353311 RchiOBHm_Chr4g0385021 RchiOBHm_Chr6g0270731 RchiOBHm_Chr6g0272811
rosa_laevigata	RLG00000013774
rosa_multiflora	Rmu_co8284529.1_g000001 Rmu_sc0000642.1_g000012 Rmu_sc0041041.1_g000001
rosa_roxburghii	Rroxscaffold_2G00085770 Rroxscaffold_7G00197640
rosa_rugosa	Rorug06G0056000 Rorug06G0056100 Rorug06G0056200
rosa_samantha	Rh2DG204000 Rh4CG002400 Rh4CG168900 Rh6AG157400 Rh6AG175200 Rh6BG140200 Rh6BG178600 Rh6CG174800 Rh6DG123600 Rh6DG167400 Rh6DG180500 Rh7AG209600 Rh7CG359700
rosa_wichuraiana	Rw6G014930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	78
AccB1I	GGYRCC	3 cut(s)	13, 35, 563
AccI	GTMKAC	1 cut(s)	1060
AccIII	TCCGGA	1 cut(s)	68
AciI	CCGC	1 cut(s)	664
AclWI	GGATC	7 cut(s)	117, 476, 625, 995, 1008, 1095, 1221
AcoI	YGGCCR	2 cut(s)	271, 624
AcsI	RAATTY	1 cut(s)	859
AcuI	CTGAAG	3 cut(s)	147, 417, 566
AcyI	GRCGYC	1 cut(s)	36
AdeI	CACNNNGTG	1 cut(s)	55
AfaI	GTAC	2 cut(s)	846, 887
AgsI	TTSAA	4 cut(s)	170, 281, 728, 867
AjnI	CCWGG	2 cut(s)	38, 807
AleI	CACNNNNGTG	1 cut(s)	137
AloI	GAACNNNNNNTCC	2 cut(s)	940, 972
AluBI	AGCT	3 cut(s)	175, 417, 747
AluI	AGCT	3 cut(s)	175, 417, 747
Alw21I	GWGCWC	2 cut(s)	177, 749
Alw26I	GTCTC	4 cut(s)	271, 326, 584, 1058
AlwI	GGATC	7 cut(s)	117, 476, 625, 995, 1008, 1095, 1221
Ama87I	CYCGRG	1 cut(s)	742
Aor13HI	TCCGGA	1 cut(s)	68
AoxI	GGCC	5 cut(s)	18, 271, 323, 624, 1133
ApeKI	GCWGC	1 cut(s)	414
ApoI	RAATTY	1 cut(s)	859
AseI	ATTAAT	1 cut(s)	644
Asp700I	GAANNNNTTC	1 cut(s)	862
AspLEI	GCGC	1 cut(s)	38
AspS9I	GGNCC	1 cut(s)	811
AsuHPI	GGTGA	6 cut(s)	88, 170, 365, 750, 815, 1119
AvaI	CYCGRG	1 cut(s)	742
AvaII	GGWCC	1 cut(s)	811
BaeGI	GKGCMC	2 cut(s)	16, 31
BamHI	GGATCC	1 cut(s)	1000
BanI	GGYRCC	3 cut(s)	13, 35, 563
BanII	GRGCYC	2 cut(s)	177, 749
BauI	CACGAG	1 cut(s)	342
BbsI	GAAGAC	4 cut(s)	135, 269, 691, 997
Bbv12I	GWGCWC	2 cut(s)	177, 749
BbvI	GCAGC	1 cut(s)	426
BccI	CCATC	2 cut(s)	457, 1144
BceAI	ACGGC	2 cut(s)	258, 947
BciT130I	CCWGG	2 cut(s)	40, 809
BciVI	GTATCC	1 cut(s)	475
BcoDI	GTCTC	4 cut(s)	271, 326, 584, 1058
BfaI	CTAG	2 cut(s)	188, 1179
BfmI	CTRYAG	1 cut(s)	711
BfoI	RGCGCY	1 cut(s)	39
BfuI	GTATCC	1 cut(s)	475
BisI	GCNGC	1 cut(s)	415
BlsI	GCNGC	1 cut(s)	416
Bme1390I	CCNGG	2 cut(s)	40, 809
Bme18I	GGWCC	1 cut(s)	811
BmeT110I	CYCGRG	1 cut(s)	742
BmgT120I	GGNCC	1 cut(s)	811
BmiI	GGNNCC	6 cut(s)	15, 37, 67, 565, 813, 1002
BmrFI	CCNGG	2 cut(s)	40, 809
BmsI	GCATC	4 cut(s)	131, 208, 868, 1151
BpiI	GAAGAC	4 cut(s)	135, 269, 691, 997
BpmI	CTGGAG	3 cut(s)	61, 479, 657
BpuEI	CTTGAG	1 cut(s)	688
BsaBI	GATNNNNATC	1 cut(s)	978
BsaHI	GRCGYC	1 cut(s)	36
BsaI	GGTCTC	1 cut(s)	1058
BsaJI	CCNNGG	6 cut(s)	31, 49, 135, 1130, 1136, 1160
BsaWI	WCCGGW	1 cut(s)	68
BsaXI	ACNNNNNCTCC	8 cut(s)	606, 636, 731, 761, 905, 935, 940, 970
Bse118I	RCCGGY	1 cut(s)	16
Bse1I	ACTGG	6 cut(s)	293, 319, 483, 598, 901, 1018
Bse8I	GATNNNNATC	1 cut(s)	978
BseAI	TCCGGA	1 cut(s)	68
BseBI	CCWGG	2 cut(s)	40, 809
BseDI	CCNNGG	6 cut(s)	31, 49, 135, 1130, 1136, 1160
BseGI	GGATG	2 cut(s)	315, 1117
BseJI	GATNNNNATC	1 cut(s)	978
BseMII	CTCAG	4 cut(s)	405, 648, 1009, 1185
BseNI	ACTGG	6 cut(s)	293, 319, 483, 598, 901, 1018
BseSI	GKGCMC	2 cut(s)	16, 31
BseX3I	CGGCCG	1 cut(s)	271
BseXI	GCAGC	1 cut(s)	426
Bsh1285I	CGRYCG	2 cut(s)	274, 1060
BshFI	GGCC	5 cut(s)	20, 273, 325, 626, 1135
BshNI	GGYRCC	3 cut(s)	13, 35, 563
BsiEI	CGRYCG	2 cut(s)	274, 1060
BsiHKAI	GWGCWC	2 cut(s)	177, 749
BsiHKCI	CYCGRG	1 cut(s)	742
BsiSI	CCGG	3 cut(s)	17, 69, 270
BslFI	GGGAC	3 cut(s)	646, 767, 797
BsmAI	GTCTC	4 cut(s)	271, 326, 584, 1058
BsmFI	GGGAC	3 cut(s)	646, 767, 797
BsnI	GGCC	5 cut(s)	20, 273, 325, 626, 1135
Bso31I	GGTCTC	1 cut(s)	1058
BsoBI	CYCGRG	1 cut(s)	742
Bsp1286I	GDGCHC	4 cut(s)	16, 31, 177, 749
Bsp13I	TCCGGA	1 cut(s)	68
Bsp1407I	TGTACA	2 cut(s)	844, 885
Bsp143I	GATC	8 cut(s)	109, 370, 468, 617, 1000, 1087, 1114, 1213
Bsp19I	CCATGG	1 cut(s)	1136
BspACI	CCGC	1 cut(s)	664
BspANI	GGCC	5 cut(s)	20, 273, 325, 626, 1135
BspCNI	CTCAG	4 cut(s)	404, 649, 1008, 1184
BspEI	TCCGGA	1 cut(s)	68
BspLI	GGNNCC	6 cut(s)	15, 37, 67, 565, 813, 1002
BspPI	GGATC	7 cut(s)	117, 476, 625, 995, 1008, 1095, 1221
BspQI	GCTCTTC	2 cut(s)	165, 585
BspT107I	GGYRCC	3 cut(s)	13, 35, 563
BspTNI	GGTCTC	1 cut(s)	1058
BsrFI	RCCGGY	1 cut(s)	16
BsrGI	TGTACA	2 cut(s)	844, 885
BsrI	ACTGG	6 cut(s)	293, 319, 483, 598, 901, 1018
BssAI	RCCGGY	1 cut(s)	16
BssECI	CCNNGG	6 cut(s)	31, 49, 135, 1130, 1136, 1160
BssMI	GATC	8 cut(s)	109, 370, 468, 617, 1000, 1087, 1114, 1213
BssNI	GRCGYC	1 cut(s)	36
BssSI	CACGAG	1 cut(s)	342
BssT1I	CCWWGG	4 cut(s)	135, 1130, 1136, 1160
Bst2BI	CACGAG	1 cut(s)	342
Bst2UI	CCWGG	2 cut(s)	40, 809
Bst4CI	ACNGT	3 cut(s)	158, 337, 931
Bst6I	CTCTTC	2 cut(s)	165, 585
BstACI	GRCGYC	1 cut(s)	36
BstAPI	GCANNNNNTGC	1 cut(s)	260
BstAUI	TGTACA	2 cut(s)	844, 885
BstC8I	GCNNGC	2 cut(s)	721, 772
BstDEI	CTNAG	4 cut(s)	391, 657, 995, 1171
BstDSI	CCRYGG	3 cut(s)	31, 49, 1136
BstEII	GGTNACC	2 cut(s)	756, 803
BstF5I	GGATG	2 cut(s)	315, 1117
BstH2I	RGCGCY	1 cut(s)	39
BstHHI	GCGC	1 cut(s)	38
BstKTI	GATC	8 cut(s)	112, 373, 471, 620, 1003, 1090, 1117, 1216
BstMAI	GTCTC	4 cut(s)	271, 326, 584, 1058
BstMBI	GATC	8 cut(s)	109, 370, 468, 617, 1000, 1087, 1114, 1213
BstMCI	CGRYCG	2 cut(s)	274, 1060
BstMWI	GCNNNNNNNGC	4 cut(s)	11, 26, 35, 260
BstNI	CCWGG	2 cut(s)	40, 809
BstPI	GGTNACC	2 cut(s)	756, 803
BstSCI	CCNGG	2 cut(s)	38, 807
BstSFI	CTRYAG	1 cut(s)	711
BstSLI	GKGCMC	2 cut(s)	16, 31
BstV1I	GCAGC	1 cut(s)	426
BstV2I	GAAGAC	4 cut(s)	135, 269, 691, 997
BstX2I	RGATCY	4 cut(s)	468, 617, 1000, 1213
BstXI	CCANNNNNNTGG	2 cut(s)	800, 1137
BstYI	RGATCY	4 cut(s)	468, 617, 1000, 1213
BstZI	CGGCCG	1 cut(s)	271
BsuI	GTATCC	1 cut(s)	475
BsuRI	GGCC	5 cut(s)	20, 273, 325, 626, 1135
BtgI	CCRYGG	3 cut(s)	31, 49, 1136
BtsCI	GGATG	2 cut(s)	315, 1117
BtsIMutI	CAGTG	2 cut(s)	399, 476
Cac8I	GCNNGC	2 cut(s)	721, 772
CfoI	GCGC	1 cut(s)	38
Cfr10I	RCCGGY	1 cut(s)	16
Cfr13I	GGNCC	1 cut(s)	811
CsiI	ACCWGGT	1 cut(s)	807
Csp6I	GTAC	2 cut(s)	845, 886
CviAII	CATG	4 cut(s)	86, 421, 1049, 1137
CviQI	GTAC	2 cut(s)	845, 886
DdeI	CTNAG	4 cut(s)	391, 657, 995, 1171
DinI	GGCGCC	1 cut(s)	37
DpnI	GATC	8 cut(s)	111, 372, 470, 619, 1002, 1089, 1116, 1215
DpnII	GATC	8 cut(s)	109, 370, 468, 617, 1000, 1087, 1114, 1213
DraIII	CACNNNGTG	1 cut(s)	55
DrdI	GACNNNNNNGTC	1 cut(s)	78
DseDI	GACNNNNNNGTC	1 cut(s)	78
EaeI	YGGCCR	2 cut(s)	271, 624
EagI	CGGCCG	1 cut(s)	271
Eam1104I	CTCTTC	2 cut(s)	165, 585
EarI	CTCTTC	2 cut(s)	165, 585
Ecl136II	GAGCTC	2 cut(s)	175, 747
EclXI	CGGCCG	1 cut(s)	271
Eco130I	CCWWGG	4 cut(s)	135, 1130, 1136, 1160
Eco147I	AGGCCT	1 cut(s)	325
Eco24I	GRGCYC	2 cut(s)	177, 749
Eco31I	GGTCTC	1 cut(s)	1058
Eco47I	GGWCC	1 cut(s)	811
Eco52I	CGGCCG	1 cut(s)	271
Eco53kI	GAGCTC	2 cut(s)	175, 747
Eco57I	CTGAAG	3 cut(s)	147, 417, 566
Eco88I	CYCGRG	1 cut(s)	742
Eco91I	GGTNACC	2 cut(s)	756, 803
EcoICRI	GAGCTC	2 cut(s)	175, 747
EcoO109I	RGGNCCY	1 cut(s)	811
EcoO65I	GGTNACC	2 cut(s)	756, 803
EcoRII	CCWGG	2 cut(s)	38, 807
EcoT14I	CCWWGG	4 cut(s)	135, 1130, 1136, 1160
EcoT22I	ATGCAT	1 cut(s)	1246
EcoT38I	GRGCYC	2 cut(s)	177, 749
EgeI	GGCGCC	1 cut(s)	37
EheI	GGCGCC	1 cut(s)	37
ErhI	CCWWGG	4 cut(s)	135, 1130, 1136, 1160
FaeI	CATG	4 cut(s)	89, 424, 1052, 1140
FaqI	GGGAC	3 cut(s)	646, 767, 797
FatI	CATG	4 cut(s)	85, 420, 1048, 1136
FauI	CCCGC	1 cut(s)	671
FblI	GTMKAC	1 cut(s)	1060
Fnu4HI	GCNGC	1 cut(s)	415
FokI	GGATG	2 cut(s)	322, 1104
FriOI	GRGCYC	2 cut(s)	177, 749
Fsp4HI	GCNGC	1 cut(s)	415
FspBI	CTAG	2 cut(s)	188, 1179
GlaI	GCGC	1 cut(s)	37
GluI	GCNGC	1 cut(s)	415
GsuI	CTGGAG	3 cut(s)	61, 479, 657
HaeII	RGCGCY	1 cut(s)	39
HaeIII	GGCC	5 cut(s)	20, 273, 325, 626, 1135
HapII	CCGG	3 cut(s)	17, 69, 270
HhaI	GCGC	1 cut(s)	38
Hin1I	GRCGYC	1 cut(s)	36
Hin1II	CATG	4 cut(s)	89, 424, 1052, 1140
Hin6I	GCGC	1 cut(s)	36
HinP1I	GCGC	1 cut(s)	36
HincII	GTYRAC	2 cut(s)	298, 1061
HindII	GTYRAC	2 cut(s)	298, 1061
HinfI	GANTC	6 cut(s)	79, 517, 659, 740, 993, 1167
HpaII	CCGG	3 cut(s)	17, 69, 270
HphI	GGTGA	6 cut(s)	88, 170, 365, 750, 815, 1119
Hpy166II	GTNNAC	3 cut(s)	290, 298, 1061
Hpy188I	TCNGA	5 cut(s)	114, 127, 585, 1174, 1213
Hpy188III	TCNNGA	9 cut(s)	69, 281, 344, 435, 656, 784, 814, 855, 942
Hpy8I	GTNNAC	3 cut(s)	290, 298, 1061
HpyAV	CCTTC	5 cut(s)	100, 221, 939, 1035, 1131
HpyCH4III	ACNGT	3 cut(s)	158, 337, 931
HpyCH4V	TGCA	4 cut(s)	221, 770, 874, 1244
HpyF10VI	GCNNNNNNNGC	4 cut(s)	11, 26, 35, 260
HpyF3I	CTNAG	4 cut(s)	391, 657, 995, 1171
Hsp92I	GRCGYC	1 cut(s)	36
Hsp92II	CATG	4 cut(s)	89, 424, 1052, 1140
HspAI	GCGC	1 cut(s)	36
KasI	GGCGCC	1 cut(s)	35
Kpn2I	TCCGGA	1 cut(s)	68
Kzo9I	GATC	8 cut(s)	109, 370, 468, 617, 1000, 1087, 1114, 1213
LguI	GCTCTTC	2 cut(s)	165, 585
LmnI	GCTCC	5 cut(s)	71, 422, 752, 1012, 1162
Lsp1109I	GCAGC	1 cut(s)	426
LweI	GCATC	4 cut(s)	131, 208, 868, 1151
MabI	ACCWGGT	1 cut(s)	807
MaeI	CTAG	2 cut(s)	188, 1179
MaeIII	GTNAC	6 cut(s)	44, 505, 756, 803, 903, 1042
MalI	GATC	8 cut(s)	111, 372, 470, 619, 1002, 1089, 1116, 1215
MboI	GATC	8 cut(s)	109, 370, 468, 617, 1000, 1087, 1114, 1213
MboII	GAAGA	9 cut(s)	127, 140, 182, 269, 572, 691, 1002, 1020, 1116
MflI	RGATCY	4 cut(s)	468, 617, 1000, 1213
MhlI	GDGCHC	4 cut(s)	16, 31, 177, 749
MluCI	AATT	5 cut(s)	403, 645, 859, 937, 1108
Mly113I	GGCGCC	1 cut(s)	36
MlyI	GAGTC	4 cut(s)	88, 668, 734, 987
MmeI	TCCRAC	2 cut(s)	592, 948
Mph1103I	ATGCAT	1 cut(s)	1246
MroI	TCCGGA	1 cut(s)	68
MroXI	GAANNNNTTC	1 cut(s)	862
MseI	TTAA	3 cut(s)	513, 644, 1200
MslI	CAYNNNNRTG	1 cut(s)	137
MspI	CCGG	3 cut(s)	17, 69, 270
MspR9I	CCNGG	2 cut(s)	40, 809
MvaI	CCWGG	2 cut(s)	40, 809
MwoI	GCNNNNNNNGC	4 cut(s)	11, 26, 35, 260
NarI	GGCGCC	1 cut(s)	36
NcoI	CCATGG	1 cut(s)	1136
NdeII	GATC	8 cut(s)	109, 370, 468, 617, 1000, 1087, 1114, 1213
NlaIII	CATG	4 cut(s)	89, 424, 1052, 1140
NlaIV	GGNNCC	6 cut(s)	15, 37, 67, 565, 813, 1002
NmeAIII	GCCGAG	2 cut(s)	435, 652
NmuCI	GTSAC	3 cut(s)	44, 756, 803
NsiI	ATGCAT	1 cut(s)	1246
OliI	CACNNNNGTG	1 cut(s)	137
PaeR7I	CTCGAG	1 cut(s)	742
PceI	AGGCCT	1 cut(s)	325
PciSI	GCTCTTC	2 cut(s)	165, 585
PdmI	GAANNNNTTC	1 cut(s)	862
PfeI	GAWTC	2 cut(s)	517, 1167
PflFI	GACNNNGTC	1 cut(s)	809
PkrI	GCNGC	1 cut(s)	416
PleI	GAGTC	4 cut(s)	87, 667, 734, 987
PluTI	GGCGCC	1 cut(s)	39
PpsI	GAGTC	4 cut(s)	87, 667, 734, 987
PpuMI	RGGWCCY	1 cut(s)	811
PshBI	ATTAAT	1 cut(s)	644
Psp124BI	GAGCTC	2 cut(s)	177, 749
Psp5II	RGGWCCY	1 cut(s)	811
Psp6I	CCWGG	2 cut(s)	38, 807
PspEI	GGTNACC	2 cut(s)	756, 803
PspGI	CCWGG	2 cut(s)	38, 807
PspN4I	GGNNCC	6 cut(s)	15, 37, 67, 565, 813, 1002
PspPI	GGNCC	1 cut(s)	811
PspPPI	RGGWCCY	1 cut(s)	811
PspXI	VCTCGAGB	1 cut(s)	742
PsuI	RGATCY	4 cut(s)	468, 617, 1000, 1213
PsyI	GACNNNGTC	1 cut(s)	809
RsaI	GTAC	2 cut(s)	846, 887
RsaNI	GTAC	2 cut(s)	845, 886
RseI	CAYNNNNRTG	1 cut(s)	137
SacI	GAGCTC	2 cut(s)	177, 749
SalI	GTCGAC	1 cut(s)	1059
SapI	GCTCTTC	2 cut(s)	165, 585
SaqAI	TTAA	3 cut(s)	513, 644, 1200
SatI	GCNGC	1 cut(s)	415
Sau3AI	GATC	8 cut(s)	109, 370, 468, 617, 1000, 1087, 1114, 1213
Sau96I	GGNCC	1 cut(s)	811
SchI	GAGTC	4 cut(s)	88, 668, 734, 987
ScrFI	CCNGG	2 cut(s)	40, 809
SduI	GDGCHC	4 cut(s)	16, 31, 177, 749
SexAI	ACCWGGT	1 cut(s)	807
SfaNI	GCATC	4 cut(s)	131, 208, 868, 1151
SfcI	CTRYAG	1 cut(s)	711
SfoI	GGCGCC	1 cut(s)	37
Sfr274I	CTCGAG	1 cut(s)	742
SinI	GGWCC	1 cut(s)	811
SlaI	CTCGAG	1 cut(s)	742
SmiMI	CAYNNNNRTG	1 cut(s)	137
SmlI	CTYRAG	2 cut(s)	703, 742
SmoI	CTYRAG	2 cut(s)	703, 742
Sse9I	AATT	5 cut(s)	403, 645, 859, 937, 1108
SseBI	AGGCCT	1 cut(s)	325
SsiI	CCGC	1 cut(s)	664
SspDI	GGCGCC	1 cut(s)	35
SspI	AATATT	1 cut(s)	892
SspMI	CTAG	2 cut(s)	188, 1179
SstI	GAGCTC	2 cut(s)	177, 749
StuI	AGGCCT	1 cut(s)	325
StyD4I	CCNGG	2 cut(s)	38, 807
StyI	CCWWGG	4 cut(s)	135, 1130, 1136, 1160
TaaI	ACNGT	3 cut(s)	158, 337, 931
TaqI	TCGA	3 cut(s)	150, 743, 1060
TaqII	GACCGA	1 cut(s)	1046
TasI	AATT	5 cut(s)	403, 645, 859, 937, 1108
TatI	WGTACW	2 cut(s)	844, 885
TfiI	GAWTC	2 cut(s)	517, 1167
Tru1I	TTAA	3 cut(s)	513, 644, 1200
Tru9I	TTAA	3 cut(s)	513, 644, 1200
TscAI	CASTG	2 cut(s)	399, 483
TseFI	GTSAC	3 cut(s)	44, 756, 803
TseI	GCWGC	1 cut(s)	414
Tsp45I	GTSAC	3 cut(s)	44, 756, 803
TspDTI	ATGAA	2 cut(s)	651, 1020
TspGWI	ACGGA	2 cut(s)	66, 814
TspRI	CASTG	2 cut(s)	399, 483
Tth111I	GACNNNGTC	1 cut(s)	809
VpaK11BI	GGWCC	1 cut(s)	811
VspI	ATTAAT	1 cut(s)	644
XapI	RAATTY	1 cut(s)	859
XhoI	CTCGAG	1 cut(s)	742
XmiI	GTMKAC	1 cut(s)	1060
XmnI	GAANNNNTTC	1 cut(s)	862
XspI	CTAG	2 cut(s)	188, 1179
Zsp2I	ATGCAT	1 cut(s)	1246

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.