FvH4_2g15800

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Forward (+)
13849618 .. 13855926
6309 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g15800.t10

Sequence Viewer

Length: 1461 bp
ATGCATAAAAGGTTGCTGCATTTGGCTCATGATCCTGCTCAGAGACCGGCCATCGAAGTCCGGCTCGTACAGGTTCATCCAACCTCAGATGGGAATTCAGATTCTCCAGGTAAAGATGCTGCTCAAAGTTCAAAGTTATCTGGCAGACAAAGCATACATCCACCTCCAGCATTCGGCTCATCGCCCAACCTTGAAGCCCTTGCACTGGAATCGAATAAATCTGACGATCAAGATGATGAACATTCTGTACATGCCAACACACAGTTGAGTCGGCCCATGCATGAAATCACTTTCTCAACAGATGACAAGCCAAAACTACTCAGTCAGCTGACTTCCTTGCTTGCGGAGATTGGGCTGAACATCCAAGAAGCGCATGCATTTTCCACGCTGGATGGTTACTCCTTGGATGTCTTTGTTGTTGACGGCTGGCCTTACGAGGAAACAGAGCAGCTCAAGACTGCATTGGAAAAGGAAGTTTTGAAGATTGAGGGACCCTGGCCAATACATCGATCACCATCTTCTGGTAGCGATCATGATCAAGTAGTGATCAAATCTGAGCCTAATCATCTGACTATACCCAATGATGGGACTGATGTATGGGAAATTGATCCTAAACAGTTAAAATTTGGAAACAAAGTTGCATCTGGGTCCTGTGGTGATCTATACAAAGGTACATACTGTAGTCAAGAAGTGGCCATAAAAGTCCTCAAGCCTGAGTGTGTCAATTCGGACATGCAAAAAGATTTTGCCCAAGAAGTTTTTATCATGAGGAAAGTTCGACATAAGAATGTTGTACAATTCATTGGTGCATGTACCAAGACCCCAAGCTTGTGTATTGTAACAGAATATATGTCTGGTGGAAGTGTGTACGACTACTTACATAAACAAAAGGGTGTTTTTAAGCTCCCATCATTGCTCAAGGTTGCAATTGATGTTTCCAAGGGAATGACATACTTGCACCAGAATAAAATAATCCACAGGGATTTAAAAGCTGCCAATCTCTTGATGGATGAAAATGAAGTTGTCAAGGTTGCTGATTTTGGGGTTGCCAGAGTCATATCTCAATCAGGAGTAATGACGGCAGAAACTGGGACATATAGGTGGATGGCTCCAGAGGTTATAGAACACAAGCCATATGACCACAAGGCTGATGTGTTTAGCTTTGGAATTGTGTTGTGGGAGTTGCTGACTGGAAAGCTTCCATACGAATACCTGACCCCACTACAAGCAGCTGTTGGAGTGGTCCAAAAGGGCTTACGGCCAACCATCCCAAAGCAAACTCATCCAAAGCTTACTGAGTTGCTTGAGAAATGCTGGCAACAAGATCCAGCATTAAGACCCGACTTCTCAGAAATCATAGAGATGCTGCTTCCATTAGCCAAGGAGATTGGTGATGAAGGAGAAGAACGACGCAAGTCATCAGGAGGTTTTCTGTCCGTCCTTAGACGAGGTCATCACTAA

Protein Analysis

487

Amino Acids

54.14

Weight (kDa)

6.03

Isoelectric Point (pI)

51.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 291 - 482 1.7e-60 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 294 - 487 3e-54 Protein kinase domain
Pkinase_fungal PF17667 387 - 472 7e-06 Fungal protein kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 521
AciI CCGC 1 cut(s) 344
AclWI GGATC 3 cut(s) 26, 602, 1319
AcoI YGGCCR 4 cut(s) 48, 497, 693, 1259
AcsI RAATTY 2 cut(s) 94, 623
AfaI GTAC 6 cut(s) 69, 249, 673, 795, 814, 869
AfiI CCNNNNNNNGG 6 cut(s) 90, 173, 205, 521, 584, 585
AgsI TTSAA 3 cut(s) 132, 194, 481
AjnI CCWGG 2 cut(s) 106, 494
AluBI AGCT 9 cut(s) 328, 451, 828, 904, 992, 1161, 1198, 1232, 1291
AluI AGCT 9 cut(s) 328, 451, 828, 904, 992, 1161, 1198, 1232, 1291
Alw26I GTCTC 1 cut(s) 37
AlwI GGATC 3 cut(s) 26, 602, 1319
AlwNI CAGNNNCTG 1 cut(s) 1088
AoxI GGCC 6 cut(s) 48, 272, 428, 497, 693, 1259
ApeKI GCWGC 6 cut(s) 16, 119, 448, 992, 1229, 1366
ApoI RAATTY 2 cut(s) 94, 623
AspLEI GCGC 1 cut(s) 373
AspS9I GGNCC 4 cut(s) 273, 491, 648, 1243
AsuHPI GGTGA 3 cut(s) 504, 668, 1403
AvaII GGWCC 3 cut(s) 491, 648, 1243
BalI TGGCCA 2 cut(s) 499, 695
BbvI GCAGC 6 cut(s) 3, 106, 460, 979, 1241, 1353
BccI CCATC 9 cut(s) 59, 83, 386, 523, 578, 916, 1000, 1099, 1274
BceAI ACGGC 3 cut(s) 439, 1095, 1274
BcgI CGANNNNNNTGC 2 cut(s) 192, 226
BciT130I CCWGG 2 cut(s) 108, 496
BclI TGATCA 2 cut(s) 535, 546
BcoDI GTCTC 1 cut(s) 37
BfmI CTRYAG 1 cut(s) 679
BisI GCNGC 6 cut(s) 17, 120, 449, 993, 1230, 1367
BlsI GCNGC 6 cut(s) 18, 121, 450, 994, 1231, 1368
Bme1390I CCNGG 2 cut(s) 108, 496
Bme18I GGWCC 3 cut(s) 491, 648, 1243
BmgT120I GGNCC 4 cut(s) 273, 491, 648, 1243
BmiI GGNNCC 4 cut(s) 492, 493, 649, 1110
BmrFI CCNGG 2 cut(s) 108, 496
BmrI ACTGGG 1 cut(s) 1098
BmsI GCATC 3 cut(s) 106, 650, 1353
BmuI ACTGGG 1 cut(s) 1098
BoxI GACNNNNGTC 1 cut(s) 1414
BpmI CTGGAG 3 cut(s) 90, 150, 1095
BpuEI CTTGAG 4 cut(s) 437, 692, 902, 1325
Bsa29I ATCGAT 1 cut(s) 508
BsaBI GATNNNNATC 2 cut(s) 514, 534
BsaI GGTCTC 1 cut(s) 37
BsaJI CCNNGG 4 cut(s) 402, 494, 939, 1380
Bsc4I CCNNNNNNNGG 6 cut(s) 90, 173, 205, 521, 584, 585
Bse118I RCCGGY 1 cut(s) 46
Bse1I ACTGG 3 cut(s) 210, 1093, 1195
Bse3DI GCAATG 1 cut(s) 911
Bse8I GATNNNNATC 2 cut(s) 514, 534
BseBI CCWGG 2 cut(s) 108, 496
BseCI ATCGAT 1 cut(s) 508
BseDI CCNNGG 4 cut(s) 402, 494, 939, 1380
BseGI GGATG 9 cut(s) 76, 157, 360, 397, 412, 1015, 1110, 1266, 1282
BseJI GATNNNNATC 2 cut(s) 514, 534
BseLI CCNNNNNNNGG 6 cut(s) 90, 173, 205, 521, 584, 585
BseMI GCAATG 1 cut(s) 911
BseMII CTCAG 7 cut(s) 53, 99, 334, 546, 705, 1287, 1362
BseNI ACTGG 3 cut(s) 210, 1093, 1195
BseXI GCAGC 6 cut(s) 3, 106, 460, 979, 1241, 1353
BshFI GGCC 6 cut(s) 50, 274, 430, 499, 695, 1261
BshVI ATCGAT 1 cut(s) 508
BsiSI CCGG 2 cut(s) 47, 61
BslFI GGGAC 3 cut(s) 504, 601, 1105
BslI CCNNNNNNNGG 6 cut(s) 90, 173, 205, 521, 584, 585
BsmAI GTCTC 1 cut(s) 37
BsmFI GGGAC 3 cut(s) 504, 601, 1105
BsmI GAATGC 1 cut(s) 170
BsnI GGCC 6 cut(s) 50, 274, 430, 499, 695, 1261
Bso31I GGTCTC 1 cut(s) 37
Bsp1407I TGTACA 2 cut(s) 247, 793
Bsp143I GATC 9 cut(s) 31, 226, 509, 529, 535, 546, 607, 658, 1324
BspACI CCGC 1 cut(s) 344
BspANI GGCC 6 cut(s) 50, 274, 430, 499, 695, 1261
BspCNI CTCAG 7 cut(s) 52, 98, 333, 547, 706, 1288, 1361
BspDI ATCGAT 1 cut(s) 508
BspHI TCATGA 3 cut(s) 28, 532, 765
BspLI GGNNCC 4 cut(s) 492, 493, 649, 1110
BspPI GGATC 3 cut(s) 26, 602, 1319
BspTNI GGTCTC 1 cut(s) 37
BsrDI GCAATG 1 cut(s) 911
BsrFI RCCGGY 1 cut(s) 46
BsrGI TGTACA 2 cut(s) 247, 793
BsrI ACTGG 3 cut(s) 210, 1093, 1195
BssAI RCCGGY 1 cut(s) 46
BssECI CCNNGG 4 cut(s) 402, 494, 939, 1380
BssMI GATC 9 cut(s) 31, 226, 509, 529, 535, 546, 607, 658, 1324
BssT1I CCWWGG 3 cut(s) 402, 939, 1380
Bst2UI CCWGG 2 cut(s) 108, 496
Bst4CI ACNGT 3 cut(s) 264, 618, 680
BstAUI TGTACA 2 cut(s) 247, 793
BstC8I GCNNGC 4 cut(s) 342, 375, 428, 1316
BstDEI CTNAG 8 cut(s) 39, 85, 320, 555, 714, 1296, 1348, 1442
BstF5I GGATG 9 cut(s) 76, 157, 360, 397, 412, 1015, 1110, 1266, 1282
BstHHI GCGC 1 cut(s) 373
BstKTI GATC 9 cut(s) 34, 229, 512, 532, 538, 549, 610, 661, 1327
BstMAI GTCTC 1 cut(s) 37
BstMBI GATC 9 cut(s) 31, 226, 509, 529, 535, 546, 607, 658, 1324
BstMWI GCNNNNNNNGC 1 cut(s) 150
BstNI CCWGG 2 cut(s) 108, 496
BstNSI RCATGY 4 cut(s) 254, 377, 736, 813
BstPAI GACNNNNGTC 1 cut(s) 1414
BstSCI CCNGG 2 cut(s) 106, 494
BstSFI CTRYAG 1 cut(s) 679
BstV1I GCAGC 6 cut(s) 3, 106, 460, 979, 1241, 1353
BstX2I RGATCY 1 cut(s) 1324
BstYI RGATCY 1 cut(s) 1324
Bsu15I ATCGAT 1 cut(s) 508
BsuRI GGCC 6 cut(s) 50, 274, 430, 499, 695, 1261
BsuTUI ATCGAT 1 cut(s) 508
BtgZI GCGATG 1 cut(s) 165
BtsCI GGATG 9 cut(s) 76, 157, 360, 397, 412, 1015, 1110, 1266, 1282
BtsIMutI CAGTG 1 cut(s) 203
Cac8I GCNNGC 4 cut(s) 342, 375, 428, 1316
CaiI CAGNNNCTG 1 cut(s) 1088
CciI TCATGA 3 cut(s) 28, 532, 765
CfoI GCGC 1 cut(s) 373
Cfr10I RCCGGY 1 cut(s) 46
Cfr13I GGNCC 4 cut(s) 273, 491, 648, 1243
ClaI ATCGAT 1 cut(s) 508
CseI GACGC 1 cut(s) 1419
Csp6I GTAC 6 cut(s) 68, 248, 672, 794, 813, 868
CviAII CATG 9 cut(s) 29, 251, 277, 281, 374, 533, 733, 766, 810
CviQI GTAC 6 cut(s) 68, 248, 672, 794, 813, 868
DdeI CTNAG 8 cut(s) 39, 85, 320, 555, 714, 1296, 1348, 1442
DpnI GATC 9 cut(s) 33, 228, 511, 531, 537, 548, 609, 660, 1326
DpnII GATC 9 cut(s) 31, 226, 509, 529, 535, 546, 607, 658, 1324
DraI TTTAAA 1 cut(s) 987
EaeI YGGCCR 4 cut(s) 48, 497, 693, 1259
Eco130I CCWWGG 3 cut(s) 402, 939, 1380
Eco31I GGTCTC 1 cut(s) 37
Eco47I GGWCC 3 cut(s) 491, 648, 1243
EcoO109I RGGNCCY 2 cut(s) 491, 648
EcoRI GAATTC 1 cut(s) 94
EcoRII CCWGG 2 cut(s) 106, 494
EcoT14I CCWWGG 3 cut(s) 402, 939, 1380
EcoT22I ATGCAT 3 cut(s) 6, 282, 379
ErhI CCWWGG 3 cut(s) 402, 939, 1380
FaeI CATG 9 cut(s) 32, 254, 280, 284, 377, 536, 736, 769, 813
FaqI GGGAC 3 cut(s) 504, 601, 1105
FatI CATG 9 cut(s) 28, 250, 276, 280, 373, 532, 732, 765, 809
FauNDI CATATG 1 cut(s) 1135
FbaI TGATCA 2 cut(s) 535, 546
Fnu4HI GCNGC 6 cut(s) 17, 120, 449, 993, 1230, 1367
FokI GGATG 9 cut(s) 63, 144, 347, 404, 419, 1022, 1117, 1253, 1269
Fsp4HI GCNGC 6 cut(s) 17, 120, 449, 993, 1230, 1367
GlaI GCGC 1 cut(s) 372
GluI GCNGC 6 cut(s) 17, 120, 449, 993, 1230, 1367
GsuI CTGGAG 3 cut(s) 90, 150, 1095
HaeIII GGCC 6 cut(s) 50, 274, 430, 499, 695, 1261
HapII CCGG 2 cut(s) 47, 61
HgaI GACGC 1 cut(s) 1419
HhaI GCGC 1 cut(s) 373
Hin1II CATG 9 cut(s) 32, 254, 280, 284, 377, 536, 736, 769, 813
Hin6I GCGC 1 cut(s) 371
HinP1I GCGC 1 cut(s) 371
HincII GTYRAC 1 cut(s) 421
HindII GTYRAC 1 cut(s) 421
HindIII AAGCTT 3 cut(s) 826, 1196, 1289
HinfI GANTC 4 cut(s) 101, 209, 268, 1053
HpaII CCGG 2 cut(s) 47, 61
HphI GGTGA 3 cut(s) 504, 668, 1403
Hpy166II GTNNAC 2 cut(s) 421, 868
Hpy188I TCNGA 8 cut(s) 42, 88, 100, 223, 556, 570, 730, 1351
Hpy8I GTNNAC 2 cut(s) 421, 868
Hpy99I CGWCG 1 cut(s) 1413
HpyAV CCTTC 1 cut(s) 1391
HpyCH4III ACNGT 3 cut(s) 264, 618, 680
HpyF10VI GCNNNNNNNGC 1 cut(s) 150
HpyF3I CTNAG 8 cut(s) 39, 85, 320, 555, 714, 1296, 1348, 1442
Hsp92II CATG 9 cut(s) 32, 254, 280, 284, 377, 536, 736, 769, 813
HspAI GCGC 1 cut(s) 371
KflI GGGWCCC 1 cut(s) 491
Ksp22I TGATCA 2 cut(s) 535, 546
Kzo9I GATC 9 cut(s) 31, 226, 509, 529, 535, 546, 607, 658, 1324
LmnI GCTCC 2 cut(s) 909, 1114
Lsp1109I GCAGC 6 cut(s) 3, 106, 460, 979, 1241, 1353
LweI GCATC 3 cut(s) 106, 650, 1353
MaeIII GTNAC 2 cut(s) 395, 838
MalI GATC 9 cut(s) 33, 228, 511, 531, 537, 548, 609, 660, 1326
MboI GATC 9 cut(s) 31, 226, 509, 529, 535, 546, 607, 658, 1324
MboII GAAGA 3 cut(s) 493, 510, 1415
MfeI CAATTG 1 cut(s) 927
MflI RGATCY 1 cut(s) 1324
MlsI TGGCCA 2 cut(s) 499, 695
MluCI AATT 7 cut(s) 94, 603, 623, 724, 797, 927, 1167
MluNI TGGCCA 2 cut(s) 499, 695
MlyI GAGTC 2 cut(s) 277, 1062
MmeI TCCRAC 2 cut(s) 104, 1216
MnlI CCTC 9 cut(s) 94, 174, 430, 481, 716, 762, 1108, 1418, 1442
Mox20I TGGCCA 2 cut(s) 499, 695
Mph1103I ATGCAT 3 cut(s) 6, 282, 379
MscI TGGCCA 2 cut(s) 499, 695
MseI TTAA 4 cut(s) 620, 900, 986, 1334
MslI CAYNNNNRTG 3 cut(s) 786, 1099, 1361
Msp20I TGGCCA 2 cut(s) 499, 695
MspA1I CMGCKG 2 cut(s) 328, 1232
MspI CCGG 2 cut(s) 47, 61
MspR9I CCNGG 2 cut(s) 108, 496
MunI CAATTG 1 cut(s) 927
Mva1269I GAATGC 1 cut(s) 170
MvaI CCWGG 2 cut(s) 108, 496
MwoI GCNNNNNNNGC 1 cut(s) 150
NdeI CATATG 1 cut(s) 1135
NdeII GATC 9 cut(s) 31, 226, 509, 529, 535, 546, 607, 658, 1324
NlaIII CATG 9 cut(s) 32, 254, 280, 284, 377, 536, 736, 769, 813
NlaIV GGNNCC 4 cut(s) 492, 493, 649, 1110
NsiI ATGCAT 3 cut(s) 6, 282, 379
NspI RCATGY 4 cut(s) 254, 377, 736, 813
PaeI GCATGC 1 cut(s) 377
PagI TCATGA 3 cut(s) 28, 532, 765
PctI GAATGC 1 cut(s) 170
PfeI GAWTC 2 cut(s) 101, 209
PflFI GACNNNGTC 1 cut(s) 1449
PflMI CCANNNNNTGG 1 cut(s) 521
PkrI GCNGC 6 cut(s) 18, 121, 450, 994, 1231, 1368
PleI GAGTC 2 cut(s) 276, 1061
PpsI GAGTC 2 cut(s) 276, 1061
PpuMI RGGWCCY 2 cut(s) 491, 648
PshAI GACNNNNGTC 1 cut(s) 1414
Psp5II RGGWCCY 2 cut(s) 491, 648
Psp6I CCWGG 2 cut(s) 106, 494
PspGI CCWGG 2 cut(s) 106, 494
PspN4I GGNNCC 4 cut(s) 492, 493, 649, 1110
PspPI GGNCC 4 cut(s) 273, 491, 648, 1243
PspPPI RGGWCCY 2 cut(s) 491, 648
PsrI GAACNNNNNNTAC 2 cut(s) 231, 263
PstNI CAGNNNCTG 1 cut(s) 1088
PsuI RGATCY 1 cut(s) 1324
PsyI GACNNNGTC 1 cut(s) 1449
PvuII CAGCTG 2 cut(s) 328, 1232
RsaI GTAC 6 cut(s) 69, 249, 673, 795, 814, 869
RsaNI GTAC 6 cut(s) 68, 248, 672, 794, 813, 868
RseI CAYNNNNRTG 3 cut(s) 786, 1099, 1361
SaqAI TTAA 4 cut(s) 620, 900, 986, 1334
SatI GCNGC 6 cut(s) 17, 120, 449, 993, 1230, 1367
Sau3AI GATC 9 cut(s) 31, 226, 509, 529, 535, 546, 607, 658, 1324
Sau96I GGNCC 4 cut(s) 273, 491, 648, 1243
SchI GAGTC 2 cut(s) 277, 1062
ScrFI CCNGG 2 cut(s) 108, 496
SfaNI GCATC 3 cut(s) 106, 650, 1353
SfcI CTRYAG 1 cut(s) 679
SinI GGWCC 3 cut(s) 491, 648, 1243
SmiMI CAYNNNNRTG 3 cut(s) 786, 1099, 1361
SmlI CTYRAG 4 cut(s) 452, 707, 917, 1304
SmoI CTYRAG 4 cut(s) 452, 707, 917, 1304
SphI GCATGC 1 cut(s) 377
Sse9I AATT 7 cut(s) 94, 603, 623, 724, 797, 927, 1167
SsiI CCGC 1 cut(s) 344
StyD4I CCNGG 2 cut(s) 106, 494
StyI CCWWGG 3 cut(s) 402, 939, 1380
TaaI ACNGT 3 cut(s) 264, 618, 680
TaqI TCGA 4 cut(s) 54, 212, 508, 778
TasI AATT 7 cut(s) 94, 603, 623, 724, 797, 927, 1167
TatI WGTACW 2 cut(s) 247, 793
TfiI GAWTC 2 cut(s) 101, 209
Tru1I TTAA 4 cut(s) 620, 900, 986, 1334
Tru9I TTAA 4 cut(s) 620, 900, 986, 1334
TscAI CASTG 1 cut(s) 210
TseI GCWGC 6 cut(s) 16, 119, 448, 992, 1229, 1366
TspDTI ATGAA 7 cut(s) 65, 252, 297, 790, 1026, 1032, 1410
TspGWI ACGGA 1 cut(s) 1426
TspRI CASTG 1 cut(s) 210
Tth111I GACNNNGTC 1 cut(s) 1449
Van91I CCANNNNNTGG 1 cut(s) 521
VpaK11BI GGWCC 3 cut(s) 491, 648, 1243
XapI RAATTY 2 cut(s) 94, 623
XceI RCATGY 4 cut(s) 254, 377, 736, 813
XcmI CCANNNNNNNNNTGG 1 cut(s) 1003
Zsp2I ATGCAT 3 cut(s) 6, 282, 379
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.