Rh6AG438700

Tyrosine kinase, catalytic domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
OG0001013
Physical Location & Seq
Forward (+)
62725792 .. 62732520
6729 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG438700.1

Sequence Viewer

Length: 1032 bp
ATGGCGGAGGAAGACACGGAGAGTCGGTGTAGCATACCTGCGGGTTTTTCGCCGGCTTTGACCCGAAAGCAGAAACTGAAAGTGAATATCTACAATGAAATTCTGGTCCGGCTTAAGGACTCGGATGTCGCGGAGGCCCAACAACCCGGTTTCGAAGATGAACTCTGGGCTCATTTCAATCGCCTCCCAACTAGGTATGCTTTGGATGTGAATGTGGAGAGGGCACAAGATGTTCTCATGCATAAAAGACTATTGCATGTGGCACATGACCCCGCCACTAGACCTGCAGTCGAAGTCCGTCTTGTGCAGGTTCATTTTTCTTCTAATTTAAGCTCATTCAAAAAAGAAGATACTCAATGTTCTAGTTTTGCTGGCACACAGAGTCATCCACCACCAGCTTTTGGTTTGTCAGAAGACCTTGAACTTGCTCTTGAAGCCAAAAAGTTACAAGTTCAACATGAGAATACCACTGTGAATGCCTTTTCAAGGCCGATGCATGAAATTACAATTTCAACTAATGACAAGCCCAAACTCCTCAGTGAGTTGACATCCTTATTATCTGACATCGGACTGAACATTCAAGAAGCACATGCTTTTTCTACAACAGATGGCTACTCCTTGGATGTCTTTGTCGTTGATGGTTGGGAATGTGAGGAAACTGAACGGCTTAGACAGGCACTGGCAAAAGAATTACTTTGGAGTGAGAATCCTTGCTTGGATTATAATGTCATCTCCCCTGTTCTGGGGCAAGACACTGGAATGAAGGTCATTGGTGATCATGTAAGCACATCCAGTGAAGAAAAAGATATCTGGGAAATTGAAGCAAGCCTATTGACATATGAAAGGAAAATTGCTTCTGGATCAAATGGTGATTTATATCAAGGTACTTTCTGTGGTCAAGATGTGGCCATTAAAGTTCTCAGCACTGAGCGCCTAAATGAAACCATGAGGGAGTTTACCCAAGAAGTCGCTATCATGAGGTTGGTTATGTCACTTCTTAACTCAATTAGCCCTGTGTTCGTTATTTTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MS_channel Pkinase_Tyr

Protein Analysis

343

Amino Acids

38.45

Weight (kDa)

4.91

Isoelectric Point (pI)

48.03

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 723
AasI GACNNNNNNGTC 1 cut(s) 125
Acc36I ACCTGC 3 cut(s) 46, 292, 298
AccB7I CCANNNNNTGG 1 cut(s) 401
AccII CGCG 1 cut(s) 131
AciI CCGC 4 cut(s) 5, 41, 131, 273
AclWI GGATC 1 cut(s) 868
AcoI YGGCCR 1 cut(s) 906
AcsI RAATTY 1 cut(s) 99
AfaI GTAC 1 cut(s) 886
AfiI CCNNNNNNNGG 5 cut(s) 115, 401, 486, 742, 743
AflII CTTAAG 1 cut(s) 113
AgsI TTSAA 9 cut(s) 178, 340, 422, 434, 455, 486, 513, 581, 821
AhdI GACNNNNNGTC 1 cut(s) 287
AjuI GAANNNNNNNTTGG 2 cut(s) 698, 730
AluBI AGCT 2 cut(s) 333, 398
AluI AGCT 2 cut(s) 333, 398
AlwI GGATC 1 cut(s) 868
AlwNI CAGNNNCTG 2 cut(s) 76, 679
AoxI GGCC 3 cut(s) 135, 488, 906
ApoI RAATTY 1 cut(s) 99
AspLEI GCGC 1 cut(s) 933
AspS9I GGNCC 2 cut(s) 106, 136
AsuC2I CCSGG 1 cut(s) 147
AsuHPI GGTGA 2 cut(s) 785, 881
AsuII TTCGAA 1 cut(s) 153
AvaII GGWCC 1 cut(s) 106
BaeGI GKGCMC 1 cut(s) 226
BalI TGGCCA 1 cut(s) 908
BanII GRGCYC 1 cut(s) 172
BbsI GAAGAC 2 cut(s) 18, 420
BccI CCATC 2 cut(s) 602, 632
BceAI ACGGC 1 cut(s) 680
BclI TGATCA 1 cut(s) 775
BcnI CCSGG 1 cut(s) 147
BfaI CTAG 3 cut(s) 192, 279, 363
BfmI CTRYAG 1 cut(s) 285
BfoI RGCGCY 1 cut(s) 934
BfrI CTTAAG 1 cut(s) 113
BfuAI ACCTGC 3 cut(s) 46, 292, 298
Bme1390I CCNGG 1 cut(s) 147
Bme18I GGWCC 1 cut(s) 106
BmeRI GACNNNNNGTC 1 cut(s) 287
BmgT120I GGNCC 2 cut(s) 106, 136
BmrFI CCNGG 1 cut(s) 147
BmsI GCATC 1 cut(s) 483
BpiI GAAGAC 2 cut(s) 18, 420
Bpu14I TTCGAA 1 cut(s) 153
BpuMI CCSGG 1 cut(s) 147
BsaBI GATNNNNATC 1 cut(s) 876
BsaJI CCNNGG 1 cut(s) 618
BsaXI ACNNNNNCTCC 2 cut(s) 11, 41
Bsc4I CCNNNNNNNGG 5 cut(s) 115, 401, 486, 742, 743
Bse118I RCCGGY 1 cut(s) 52
Bse1I ACTGG 3 cut(s) 684, 760, 792
Bse8I GATNNNNATC 1 cut(s) 876
BseDI CCNNGG 1 cut(s) 618
BseGI GGATG 6 cut(s) 130, 211, 385, 548, 628, 788
BseJI GATNNNNATC 1 cut(s) 876
BseLI CCNNNNNNNGG 5 cut(s) 115, 401, 486, 742, 743
BseMII CTCAG 3 cut(s) 550, 918, 934
BseNI ACTGG 3 cut(s) 684, 760, 792
BseRI GAGGAG 1 cut(s) 524
BseSI GKGCMC 1 cut(s) 226
BsgI GTGCAG 1 cut(s) 326
Bsh1236I CGCG 1 cut(s) 131
BshFI GGCC 3 cut(s) 137, 490, 908
BsiSI CCGG 3 cut(s) 53, 109, 147
BslI CCNNNNNNNGG 5 cut(s) 115, 401, 486, 742, 743
BsmI GAATGC 1 cut(s) 481
BsnI GGCC 3 cut(s) 137, 490, 908
Bsp119I TTCGAA 1 cut(s) 153
Bsp1286I GDGCHC 2 cut(s) 172, 226
Bsp143I GATC 2 cut(s) 775, 860
BspACI CCGC 4 cut(s) 5, 41, 131, 273
BspANI GGCC 3 cut(s) 137, 490, 908
BspCNI CTCAG 3 cut(s) 549, 919, 933
BspFNI CGCG 1 cut(s) 131
BspHI TCATGA 1 cut(s) 975
BspMAI CTGCAG 1 cut(s) 289
BspMI ACCTGC 3 cut(s) 46, 292, 298
BspPI GGATC 1 cut(s) 868
BspT104I TTCGAA 1 cut(s) 153
BspTI CTTAAG 1 cut(s) 113
BsrFI RCCGGY 1 cut(s) 52
BsrI ACTGG 3 cut(s) 684, 760, 792
BssAI RCCGGY 1 cut(s) 52
BssECI CCNNGG 1 cut(s) 618
BssMI GATC 2 cut(s) 775, 860
BssT1I CCWWGG 1 cut(s) 618
Bst4CI ACNGT 1 cut(s) 472
BstAFI CTTAAG 1 cut(s) 113
BstBI TTCGAA 1 cut(s) 153
BstC8I GCNNGC 3 cut(s) 54, 373, 826
BstDEI CTNAG 4 cut(s) 536, 668, 920, 927
BstENI CCTNNNNNAGG 1 cut(s) 484
BstF5I GGATG 6 cut(s) 130, 211, 385, 548, 628, 788
BstFNI CGCG 1 cut(s) 131
BstH2I RGCGCY 1 cut(s) 934
BstHHI GCGC 1 cut(s) 933
BstKTI GATC 2 cut(s) 778, 863
BstMBI GATC 2 cut(s) 775, 860
BstMWI GCNNNNNNNGC 2 cut(s) 434, 930
BstNSI RCATGY 2 cut(s) 260, 593
BstSCI CCNGG 1 cut(s) 145
BstSFI CTRYAG 1 cut(s) 285
BstSLI GKGCMC 1 cut(s) 226
BstUI CGCG 1 cut(s) 131
BstV2I GAAGAC 2 cut(s) 18, 420
BsuRI GGCC 3 cut(s) 137, 490, 908
BtsCI GGATG 6 cut(s) 130, 211, 385, 548, 628, 788
BtsIMutI CAGTG 6 cut(s) 468, 544, 677, 753, 799, 924
BveI ACCTGC 3 cut(s) 46, 292, 298
Cac8I GCNNGC 3 cut(s) 54, 373, 826
CaiI CAGNNNCTG 2 cut(s) 76, 679
CciI TCATGA 1 cut(s) 975
CfoI GCGC 1 cut(s) 933
Cfr10I RCCGGY 1 cut(s) 52
Cfr13I GGNCC 2 cut(s) 106, 136
Csp6I GTAC 1 cut(s) 885
CviAII CATG 9 cut(s) 238, 257, 266, 458, 497, 590, 779, 946, 976
CviQI GTAC 1 cut(s) 885
DdeI CTNAG 4 cut(s) 536, 668, 920, 927
DpnI GATC 2 cut(s) 777, 862
DpnII GATC 2 cut(s) 775, 860
DrdI GACNNNNNNGTC 1 cut(s) 125
DriI GACNNNNNGTC 1 cut(s) 287
DseDI GACNNNNNNGTC 1 cut(s) 125
EaeI YGGCCR 1 cut(s) 906
Eam1105I GACNNNNNGTC 1 cut(s) 287
EciI GGCGGA 1 cut(s) 20
Eco130I CCWWGG 1 cut(s) 618
Eco24I GRGCYC 1 cut(s) 172
Eco32I GATATC 1 cut(s) 808
Eco47I GGWCC 1 cut(s) 106
EcoNI CCTNNNNNAGG 1 cut(s) 484
EcoRV GATATC 1 cut(s) 808
EcoT14I CCWWGG 1 cut(s) 618
EcoT22I ATGCAT 2 cut(s) 243, 498
EcoT38I GRGCYC 1 cut(s) 172
ErhI CCWWGG 1 cut(s) 618
FaeI CATG 9 cut(s) 241, 260, 269, 461, 500, 593, 782, 949, 979
FalI AAGNNNNNCTT 4 cut(s) 285, 317, 678, 710
FatI CATG 9 cut(s) 237, 256, 265, 457, 496, 589, 778, 945, 975
FauI CCCGC 2 cut(s) 34, 280
FauNDI CATATG 1 cut(s) 838
FbaI TGATCA 1 cut(s) 775
FokI GGATG 6 cut(s) 137, 218, 372, 535, 635, 775
FriOI GRGCYC 1 cut(s) 172
FspBI CTAG 3 cut(s) 192, 279, 363
GlaI GCGC 1 cut(s) 932
HaeII RGCGCY 1 cut(s) 934
HaeIII GGCC 3 cut(s) 137, 490, 908
HapII CCGG 3 cut(s) 53, 109, 147
HhaI GCGC 1 cut(s) 933
Hin1II CATG 9 cut(s) 241, 260, 269, 461, 500, 593, 782, 949, 979
Hin6I GCGC 1 cut(s) 931
HinP1I GCGC 1 cut(s) 931
HincII GTYRAC 1 cut(s) 546
HindII GTYRAC 1 cut(s) 546
HinfI GANTC 4 cut(s) 22, 119, 382, 706
HpaII CCGG 3 cut(s) 53, 109, 147
HphI GGTGA 2 cut(s) 785, 881
Hpy166II GTNNAC 2 cut(s) 546, 957
Hpy188I TCNGA 4 cut(s) 124, 412, 562, 569
Hpy188III TCNNGA 5 cut(s) 431, 581, 858, 899, 976
Hpy8I GTNNAC 2 cut(s) 546, 957
HpyAV CCTTC 1 cut(s) 757
HpyCH4III ACNGT 1 cut(s) 472
HpyCH4V TGCA 5 cut(s) 241, 256, 287, 307, 496
HpyF10VI GCNNNNNNNGC 2 cut(s) 434, 930
HpyF3I CTNAG 4 cut(s) 536, 668, 920, 927
Hsp92II CATG 9 cut(s) 241, 260, 269, 461, 500, 593, 782, 949, 979
HspAI GCGC 1 cut(s) 931
KroI GCCGGC 1 cut(s) 52
KroNI GCCGGC 1 cut(s) 54
Ksp22I TGATCA 1 cut(s) 775
Kzo9I GATC 2 cut(s) 775, 860
LweI GCATC 1 cut(s) 483
MaeI CTAG 3 cut(s) 192, 279, 363
MaeIII GTNAC 2 cut(s) 444, 990
MalI GATC 2 cut(s) 777, 862
MboI GATC 2 cut(s) 775, 860
MboII GAAGA 6 cut(s) 23, 167, 312, 359, 425, 809
MhlI GDGCHC 2 cut(s) 172, 226
MlsI TGGCCA 1 cut(s) 908
MluCI AATT 8 cut(s) 99, 325, 501, 507, 689, 816, 849, 1005
MluNI TGGCCA 1 cut(s) 908
MlyI GAGTC 3 cut(s) 31, 113, 391
MnlI CCTC 7 cut(s) 127, 194, 213, 545, 646, 942, 972
Mox20I TGGCCA 1 cut(s) 908
Mph1103I ATGCAT 2 cut(s) 243, 498
MroNI GCCGGC 1 cut(s) 52
MscI TGGCCA 1 cut(s) 908
MseI TTAA 4 cut(s) 114, 329, 912, 999
MslI CAYNNNNRTG 1 cut(s) 758
Msp20I TGGCCA 1 cut(s) 908
MspCI CTTAAG 1 cut(s) 113
MspI CCGG 3 cut(s) 53, 109, 147
MspR9I CCNGG 1 cut(s) 147
Mva1269I GAATGC 1 cut(s) 481
MvnI CGCG 1 cut(s) 131
MwoI GCNNNNNNNGC 2 cut(s) 434, 930
NaeI GCCGGC 1 cut(s) 54
NciI CCSGG 1 cut(s) 147
NdeI CATATG 1 cut(s) 838
NdeII GATC 2 cut(s) 775, 860
NgoMIV GCCGGC 1 cut(s) 52
NlaIII CATG 9 cut(s) 241, 260, 269, 461, 500, 593, 782, 949, 979
NmuCI GTSAC 1 cut(s) 990
NsiI ATGCAT 2 cut(s) 243, 498
NspI RCATGY 2 cut(s) 260, 593
NspV TTCGAA 1 cut(s) 153
PagI TCATGA 1 cut(s) 975
PctI GAATGC 1 cut(s) 481
PdiI GCCGGC 1 cut(s) 54
PfeI GAWTC 1 cut(s) 706
PflMI CCANNNNNTGG 1 cut(s) 401
PleI GAGTC 3 cut(s) 30, 113, 390
PpsI GAGTC 3 cut(s) 30, 113, 390
PsiI TTATAA 1 cut(s) 723
PspPI GGNCC 2 cut(s) 106, 136
PstI CTGCAG 1 cut(s) 289
PstNI CAGNNNCTG 2 cut(s) 76, 679
RsaI GTAC 1 cut(s) 886
RsaNI GTAC 1 cut(s) 885
RseI CAYNNNNRTG 1 cut(s) 758
SaqAI TTAA 4 cut(s) 114, 329, 912, 999
Sau3AI GATC 2 cut(s) 775, 860
Sau96I GGNCC 2 cut(s) 106, 136
SchI GAGTC 3 cut(s) 31, 113, 391
ScrFI CCNGG 1 cut(s) 147
SduI GDGCHC 2 cut(s) 172, 226
SfaNI GCATC 1 cut(s) 483
SfcI CTRYAG 1 cut(s) 285
SfuI TTCGAA 1 cut(s) 153
SinI GGWCC 1 cut(s) 106
SmiMI CAYNNNNRTG 1 cut(s) 758
SmlI CTYRAG 1 cut(s) 113
SmoI CTYRAG 1 cut(s) 113
Sse9I AATT 8 cut(s) 99, 325, 501, 507, 689, 816, 849, 1005
SsiI CCGC 4 cut(s) 5, 41, 131, 273
SspMI CTAG 3 cut(s) 192, 279, 363
StyD4I CCNGG 1 cut(s) 145
StyI CCWWGG 1 cut(s) 618
TaaI ACNGT 1 cut(s) 472
TaqI TCGA 2 cut(s) 153, 291
TasI AATT 8 cut(s) 99, 325, 501, 507, 689, 816, 849, 1005
TfiI GAWTC 1 cut(s) 706
Tru1I TTAA 4 cut(s) 114, 329, 912, 999
Tru9I TTAA 4 cut(s) 114, 329, 912, 999
TscAI CASTG 6 cut(s) 475, 544, 684, 760, 799, 931
TseFI GTSAC 1 cut(s) 990
Tsp45I GTSAC 1 cut(s) 990
TspDTI ATGAA 7 cut(s) 111, 174, 302, 513, 776, 855, 954
TspGWI ACGGA 2 cut(s) 32, 287
TspRI CASTG 6 cut(s) 475, 544, 684, 760, 799, 931
Van91I CCANNNNNTGG 1 cut(s) 401
Vha464I CTTAAG 1 cut(s) 113
VpaK11BI GGWCC 1 cut(s) 106
XagI CCTNNNNNAGG 1 cut(s) 484
XapI RAATTY 1 cut(s) 99
XceI RCATGY 2 cut(s) 260, 593
XspI CTAG 3 cut(s) 192, 279, 363
Zsp2I ATGCAT 2 cut(s) 243, 498
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.