Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0001013

Physical Location & Seq

Genomic Coordinates Reverse (-)

17004322 .. 17009350

Gene Structure 5029 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0122900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1821 bp

ATGGAGACACCAGATGGCAATATGGTGCAATTGAATGCAGCTGAGGTTGGAACTAAGAAAATAAAAGAGGGCGTCCTTTGGGGACGCGGAATAAAATCCTACCAAGGGAGAGAAGGATCAAGAGACTGTTGGTCCGCTGAGGTTGACATACGCGATCAGGCACCGATTGAGTTTCTGAGGGAAGTGGAAGCCACTGGGAAGGTAAAGCACGGAAACTTGGTTAATTTAAGCGGTCATTGTGCAGAAAGTTGTAAAAGGATACTTCTTTACGAATACATTGACAATGACAATTTGGAGAAATGGTTGAAAGATCCTCCCAGCCTTCGCTCTCTGACATGGGATATTCGATTGAAAATAGCCATGGGCATCGCAAAAGGCTTGGCCTATCTTTATGACCACTCAACACTCAAAGTGCACTGTGATATAGAACTCAGTAAAGTTCTCCTGGAGAAGGACTGGAACCCAAAACTGTCAAATTTTGGTTTGCCTAAGCACAGCCACGGGACTACACGTGTCATGAGGGCATTCGGAGCTGAAAGAATTCTTAAGAAGGAGAGTGATCATGTATTTGATTTTGGAATTCTACTCATGGAGATTATTATCGGACCAAGGCCGGAAAACCTGATCTTAGTTGCGGAGGTCGATGAAGTGGCGGTGACGACGAGGATTGGAGAATGGTATAAGGCGGGACTTGCACAACGCCCTTGGGAGCAGATGGCAGGAACATCAGATTCAAGAGCTTTGAATCTGTCAATATTGTCAGTTTGTCTCCGTTGTATTGATCTAAATCCCCAAAACCGACCAAATATGAAGCAAATTGTGAAGCAGCTTCAGGAAGAGAGTAGTTGTGTTCCTTGGGTCACGGAAAGAAGATGTTGCTCCTATAGCTTGGTGGAGCTGAAGACTGCGACAAATGGATTCTCCCAGGACAAAGTTATTGGAGAAGGAAGATACGGCGTCGTCTACAAGGGTACTTTGAATAGCTTTGATGTCGCAGTCAAGAAGCTTCTTAACAATGGACAGTCAAACATAGAGTTTAGGGAGGAAGTGGAAGCCCTTGGGACGATAGTGCATGAGAACTTAATAACATTGATTGGTTACTGTGCGGAAGGTGCTCGAAGGATACTTGTATATGAATATGTTGGCAACGGGAATTTGGAGCAGCGGCTGAACCATGATTTAACTTGGGATATTCGACTGAGGATAGCCATGGGGACAGCAAAAGGGCTGGCCTACTTATATGATAAGTTCGATACCTCAGTGCTGCACTGTGATTTAAAACCCAGTAAAATTCTCCTGGATAAGAGTTGGAACCCAAAAATAACAGATTTTGGATTGGCCGGCCGGTTATTACAGCCTGAGTCAAGCAGTGGGACTACTCGTGTACTGGGAAATTTCGGATCTGTATCCGGAGAGAATTCAAGAACAGGTGGTATACGTGTACCTAACCAGGAAAGTGATCATGTATTTAACTTTGGATTTCTACTAATGAGGATAATTACGGGAACACGCCTAGAAATCCAGGGACCAACCGAAGAGGATGATGGAGTCCAACTCCCGGAGATTGTAAAACGGTTCAGAGAATGGATTGATGGACAGCCTTGGATGGGAACATCATCAGATCCTCCGCTTGAATCTCCAAGACCTAATCTGTCAATATTGCATGTTTGTCTCAGGTGTGTAGATATAAATGTGGAACAGCGACCTAGTGTGAGGCAAATTGTTCATCTGCTTGAGGAGGAGAAGTACTCCCCTCCGTGGGCGCAATCCCGTACTCCATCTCCAGAGACACAGATCAGATTGGAGCAACAAACCGACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0023052 GO:0035556 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko01521 ko01522 ko04010 ko04012 ko04013 ko04015 ko04024 ko04062 ko04068 ko04150 ko04214 ko04270 ko04320 ko04510 ko04650 ko04720 ko04722 ko04726 ko04730 ko04810 ko04910 ko04914 ko04934 ko05034 ko05160 ko05200 ko05205 ko05210 ko05211 ko05212 ko05213 ko05214 ko05215 ko05216 ko05218 ko05219 ko05220 ko05221 ko05223 ko05224 ko05225 ko05226 map01521 map01522 map04010 map04012 map04013 map04015 map04024 map04062 map04068 map04150 map04214 map04270 map04320 map04510 map04650 map04720 map04722 map04726 map04730 map04810 map04910 map04914 map04934 map05034 map05160 map05200 map05205 map05210 map05211 map05212 map05213 map05214 map05215 map05216 map05218 map05219 map05220 map05221 map05223 map05224 map05225 map05226

Pfam Domains

Protein Families

ACT Pkinase_Tyr

Protein Analysis

606

Amino Acids

68.38

Weight (kDa)

6.09

Isoelectric Point (pI)

36.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	52 - 276	1.9e-16	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	53 - 277	1.3e-19	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	308 - 576	3.9e-29	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	309 - 577	7.4e-28	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0001013)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G38470 AT4G38470 AT4G38470
fragaria_vesca	FvH4_2g15800 FvH4_2g15800 FvH4_2g15800 FvH4_2g15800 FvH4_2g15800 FvH4_2g15800 FvH4_2g15800 FvH4_2g15800 FvH4_2g37880 FvH4_2g37880 FvH4_2g37880 FvH4_2g37880 FvH4_2g37880 FvH4_2g37880 FvH4_2g37880 FvH4_2g37880 FvH4_2g37880 FvH4_2g37880 FvH4_2g37880 FvH4_2g37880 FvH4_2g37880 FvH4_2g37880
malus_domestica	MD05G1126800.v1.1 MD10G1130000.v1.1 MD10G1130300.v1.1 MD15G1006000.v1.1
prunus_persica	Prupe.1G358800_v2.0.a1 Prupe.8G170600_v2.0.a1 Prupe.8G170600_v2.0.a1 Prupe.8G170600_v2.0.a1
pyrus_communis	pycom05g12270 pycom15g00460
rosa_chinensis	RchiOBHm_Chr6g0279141 RchiOBHm_Chr6g0303741
rosa_laevigata	RLG00000011050 RLG00000013163
rosa_multiflora	Rmu_co8370501.1_g000001 Rmu_sc0006400.1_g000001 Rmu_sc0009053.1_g000001 Rmu_sc0012878.1_g000007 Rmu_sc0014203.1_g000019
rosa_roxburghii	Rroxscaffold_7G00164440 Rroxscaffold_7G00189090
rosa_rugosa	Rorug06G0122600 Rorug06G0122700 Rorug06G0122800 Rorug06G0122900 Rorug06G0324400
rosa_samantha	Rh6AG231400 Rh6AG438700 Rh6BG236300 Rh6BG464400 Rh6CG238400 Rh6CG451000 Rh6DG229900 Rh6DG437800
rosa_wichuraiana	Rw6G020260 Rw6G037980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	160
AccI	GTMKAC	2 cut(s)	963, 1435
AccII	CGCG	2 cut(s)	87, 153
AccIII	TCCGGA	1 cut(s)	1409
AciI	CCGC	9 cut(s)	87, 135, 231, 635, 653, 686, 1106, 1165, 1628
AclWI	GGATC	4 cut(s)	124, 305, 1408, 1616
AcoI	YGGCCR	2 cut(s)	1338, 1342
AcsI	RAATTY	7 cut(s)	475, 540, 579, 1153, 1290, 1393, 1417
AcuI	CTGAAG	2 cut(s)	815, 920
AcvI	CACGTG	1 cut(s)	512
AcyI	GRCGYC	2 cut(s)	72, 957
AfaI	GTAC	5 cut(s)	973, 1386, 1443, 1748, 1774
AfiI	CCNNNNNNNGG	6 cut(s)	105, 451, 1558, 1607, 1758, 1759
AflII	CTTAAG	1 cut(s)	545
AflIII	ACRYGT	3 cut(s)	509, 511, 1438
AgsI	TTSAA	8 cut(s)	34, 307, 352, 735, 745, 979, 1422, 1634
AhdI	GACNNNNNGTC	1 cut(s)	130
AjnI	CCWGG	5 cut(s)	444, 924, 1296, 1449, 1521
AluBI	AGCT	8 cut(s)	41, 533, 740, 829, 888, 898, 984, 1006
AluI	AGCT	8 cut(s)	41, 533, 740, 829, 888, 898, 984, 1006
Alw21I	GWGCWC	2 cut(s)	417, 1117
Alw26I	GTCTC	4 cut(s)	117, 773, 1676, 1781
Alw44I	GTGCAC	1 cut(s)	413
AlwI	GGATC	4 cut(s)	124, 305, 1408, 1616
AlwNI	CAGNNNCTG	1 cut(s)	1168
Aor13HI	TCCGGA	1 cut(s)	1409
AoxI	GGCC	5 cut(s)	381, 611, 1230, 1338, 1342
ApaLI	GTGCAC	1 cut(s)	413
ApeKI	GCWGC	4 cut(s)	38, 826, 1162, 1264
ApoI	RAATTY	7 cut(s)	475, 540, 579, 1153, 1290, 1393, 1417
Asp700I	GAANNNNTTC	1 cut(s)	540
AspLEI	GCGC	1 cut(s)	1765
AspS9I	GGNCC	3 cut(s)	132, 605, 1526
AsuC2I	CCSGG	1 cut(s)	1559
AsuHPI	GGTGA	1 cut(s)	667
AvaII	GGWCC	3 cut(s)	132, 605, 1526
BaeGI	GKGCMC	1 cut(s)	417
BaeI	ACNNNNGTAYC	2 cut(s)	1245, 1278
BanI	GGYRCC	1 cut(s)	160
BauI	CACGAG	1 cut(s)	1380
BbrPI	CACGTG	1 cut(s)	512
BbsI	GAAGAC	1 cut(s)	908
Bbv12I	GWGCWC	2 cut(s)	417, 1117
BbvCI	CCTCAGC	2 cut(s)	42, 138
BbvI	GCAGC	4 cut(s)	50, 838, 1174, 1251
BccI	CCATC	6 cut(s)	8, 709, 1538, 1586, 1600, 1786
BceAI	ACGGC	1 cut(s)	970
BciT130I	CCWGG	5 cut(s)	446, 926, 1298, 1451, 1523
BciVI	GTATCC	3 cut(s)	252, 1116, 1417
BclI	TGATCA	2 cut(s)	559, 1459
BcnI	CCSGG	1 cut(s)	1559
BcoDI	GTCTC	4 cut(s)	117, 773, 1676, 1781
BfaI	CTAG	3 cut(s)	1514, 1707, 1819
BfmI	CTRYAG	1 cut(s)	883
BfrI	CTTAAG	1 cut(s)	545
BfuI	GTATCC	3 cut(s)	252, 1116, 1417
BisI	GCNGC	5 cut(s)	39, 827, 1163, 1166, 1265
BlsI	GCNGC	5 cut(s)	40, 828, 1164, 1167, 1266
BmcAI	AGTACT	1 cut(s)	1748
Bme1390I	CCNGG	6 cut(s)	446, 926, 1298, 1451, 1523, 1559
Bme18I	GGWCC	3 cut(s)	132, 605, 1526
BmeRI	GACNNNNNGTC	1 cut(s)	130
BmgT120I	GGNCC	3 cut(s)	132, 605, 1526
BmiI	GGNNCC	4 cut(s)	162, 461, 1313, 1527
BmrFI	CCNGG	6 cut(s)	446, 926, 1298, 1451, 1523, 1559
BmrI	ACTGGG	3 cut(s)	204, 1278, 1397
BmsI	GCATC	1 cut(s)	375
BmuI	ACTGGG	3 cut(s)	204, 1278, 1397
BpiI	GAAGAC	1 cut(s)	908
BplI	GAGNNNNNCTC	4 cut(s)	1539, 1571, 1733, 1765
BpmI	CTGGAG	2 cut(s)	467, 1767
Bpu10I	CCTNAGC	3 cut(s)	42, 138, 489
BpuEI	CTTGAG	1 cut(s)	1754
BpuMI	CCSGG	1 cut(s)	1559
BsaAI	YACGTR	2 cut(s)	512, 1439
BsaBI	GATNNNNATC	3 cut(s)	599, 786, 1405
BsaHI	GRCGYC	2 cut(s)	72, 957
BsaWI	WCCGGW	1 cut(s)	1409
BsaXI	ACNNNNNCTCC	6 cut(s)	287, 317, 1730, 1760, 1765, 1795
Bsc4I	CCNNNNNNNGG	6 cut(s)	105, 451, 1558, 1607, 1758, 1759
Bse118I	RCCGGY	2 cut(s)	1340, 1344
Bse1I	ACTGG	4 cut(s)	199, 461, 1284, 1392
Bse8I	GATNNNNATC	3 cut(s)	599, 786, 1405
BseAI	TCCGGA	1 cut(s)	1409
BseBI	CCWGG	5 cut(s)	446, 926, 1298, 1451, 1523
BseGI	GGATG	2 cut(s)	1546, 1611
BseJI	GATNNNNATC	3 cut(s)	599, 786, 1405
BseLI	CCNNNNNNNGG	6 cut(s)	105, 451, 1558, 1607, 1758, 1759
BseMII	CTCAG	8 cut(s)	33, 129, 167, 445, 1190, 1272, 1350, 1687
BseNI	ACTGG	4 cut(s)	199, 461, 1284, 1392
BseRI	GAGGAG	2 cut(s)	1751, 1754
BseSI	GKGCMC	1 cut(s)	417
BseX3I	CGGCCG	1 cut(s)	1342
BseXI	GCAGC	4 cut(s)	50, 838, 1174, 1251
BseYI	CCCAGC	1 cut(s)	317
BsgI	GTGCAG	2 cut(s)	261, 1250
Bsh1236I	CGCG	2 cut(s)	87, 153
Bsh1285I	CGRYCG	1 cut(s)	1345
BshFI	GGCC	5 cut(s)	383, 613, 1232, 1340, 1344
BshNI	GGYRCC	1 cut(s)	160
BsiEI	CGRYCG	1 cut(s)	1345
BsiHKAI	GWGCWC	2 cut(s)	417, 1117
BsiSI	CCGG	5 cut(s)	614, 1341, 1345, 1410, 1559
BslFI	GGGAC	7 cut(s)	96, 517, 702, 1075, 1228, 1387, 1539
BslI	CCNNNNNNNGG	6 cut(s)	105, 451, 1558, 1607, 1758, 1759
BsmAI	GTCTC	4 cut(s)	117, 773, 1676, 1781
BsmFI	GGGAC	7 cut(s)	96, 517, 702, 1075, 1228, 1387, 1539
BsmI	GAATGC	2 cut(s)	40, 524
BsnI	GGCC	5 cut(s)	383, 613, 1232, 1340, 1344
Bsp1286I	GDGCHC	2 cut(s)	417, 1117
Bsp13I	TCCGGA	1 cut(s)	1409
Bsp19I	CCATGG	2 cut(s)	360, 1209
BspACI	CCGC	9 cut(s)	87, 135, 231, 635, 653, 686, 1106, 1165, 1628
BspANI	GGCC	5 cut(s)	383, 613, 1232, 1340, 1344
BspCNI	CTCAG	8 cut(s)	34, 130, 168, 444, 1191, 1271, 1351, 1686
BspEI	TCCGGA	1 cut(s)	1409
BspFNI	CGCG	2 cut(s)	87, 153
BspHI	TCATGA	1 cut(s)	516
BspLI	GGNNCC	4 cut(s)	162, 461, 1313, 1527
BspPI	GGATC	4 cut(s)	124, 305, 1408, 1616
BspT107I	GGYRCC	1 cut(s)	160
BspTI	CTTAAG	1 cut(s)	545
BsrFI	RCCGGY	2 cut(s)	1340, 1344
BsrI	ACTGG	4 cut(s)	199, 461, 1284, 1392
BssAI	RCCGGY	2 cut(s)	1340, 1344
BssNAI	GTATAC	1 cut(s)	1436
BssNI	GRCGYC	2 cut(s)	72, 957
BssSI	CACGAG	1 cut(s)	1380
BssT1I	CCWWGG	8 cut(s)	103, 360, 608, 704, 854, 1057, 1209, 1601
Bst1107I	GTATAC	1 cut(s)	1436
Bst2BI	CACGAG	1 cut(s)	1380
Bst2UI	CCWGG	5 cut(s)	446, 926, 1298, 1451, 1523
Bst4CI	ACNGT	7 cut(s)	128, 419, 471, 1023, 1103, 1271, 1575
Bst6I	CTCTTC	2 cut(s)	831, 1530
BstACI	GRCGYC	2 cut(s)	72, 957
BstAFI	CTTAAG	1 cut(s)	545
BstBAI	YACGTR	2 cut(s)	512, 1439
BstC8I	GCNNGC	2 cut(s)	1230, 1342
BstDSI	CCRYGG	4 cut(s)	360, 499, 1209, 1757
BstENI	CCTNNNNNAGG	1 cut(s)	449
BstF5I	GGATG	2 cut(s)	1546, 1611
BstFNI	CGCG	2 cut(s)	87, 153
BstHHI	GCGC	1 cut(s)	1765
BstMAI	GTCTC	4 cut(s)	117, 773, 1676, 1781
BstMCI	CGRYCG	1 cut(s)	1345
BstMWI	GCNNNNNNNGC	4 cut(s)	530, 692, 885, 1112
BstNI	CCWGG	5 cut(s)	446, 926, 1298, 1451, 1523
BstNSI	RCATGY	1 cut(s)	1667
BstSCI	CCNGG	6 cut(s)	444, 924, 1296, 1449, 1521, 1557
BstSFI	CTRYAG	1 cut(s)	883
BstSLI	GKGCMC	1 cut(s)	417
BstUI	CGCG	2 cut(s)	87, 153
BstV1I	GCAGC	4 cut(s)	50, 838, 1174, 1251
BstV2I	GAAGAC	1 cut(s)	908
BstX2I	RGATCY	3 cut(s)	310, 1400, 1621
BstYI	RGATCY	3 cut(s)	310, 1400, 1621
BstZ17I	GTATAC	1 cut(s)	1436
BstZI	CGGCCG	1 cut(s)	1342
BsuI	GTATCC	3 cut(s)	252, 1116, 1417
BsuRI	GGCC	5 cut(s)	383, 613, 1232, 1340, 1344
BtgI	CCRYGG	4 cut(s)	360, 499, 1209, 1757
BtgZI	GCGATG	1 cut(s)	352
BtsCI	GGATG	2 cut(s)	1546, 1611
BtsI	GCAGTG	1 cut(s)	1375
BtsIMutI	CAGTG	5 cut(s)	192, 415, 1266, 1267, 1375
Cac8I	GCNNGC	2 cut(s)	1230, 1342
CaiI	CAGNNNCTG	1 cut(s)	1168
CciI	TCATGA	1 cut(s)	516
CfoI	GCGC	1 cut(s)	1765
Cfr10I	RCCGGY	2 cut(s)	1340, 1344
Cfr13I	GGNCC	3 cut(s)	132, 605, 1526
CseI	GACGC	3 cut(s)	61, 93, 946
Csp6I	GTAC	5 cut(s)	972, 1385, 1442, 1747, 1773
CviQI	GTAC	5 cut(s)	972, 1385, 1442, 1747, 1773
DraI	TTTAAA	1 cut(s)	1278
DriI	GACNNNNNGTC	1 cut(s)	130
EaeI	YGGCCR	2 cut(s)	1338, 1342
EagI	CGGCCG	1 cut(s)	1342
Eam1104I	CTCTTC	2 cut(s)	831, 1530
Eam1105I	GACNNNNNGTC	1 cut(s)	130
EarI	CTCTTC	2 cut(s)	831, 1530
EclXI	CGGCCG	1 cut(s)	1342
Eco130I	CCWWGG	8 cut(s)	103, 360, 608, 704, 854, 1057, 1209, 1601
Eco47I	GGWCC	3 cut(s)	132, 605, 1526
Eco52I	CGGCCG	1 cut(s)	1342
Eco57I	CTGAAG	2 cut(s)	815, 920
Eco72I	CACGTG	1 cut(s)	512
EcoNI	CCTNNNNNAGG	1 cut(s)	449
EcoRI	GAATTC	3 cut(s)	540, 579, 1417
EcoRII	CCWGG	5 cut(s)	444, 924, 1296, 1449, 1521
EcoT14I	CCWWGG	8 cut(s)	103, 360, 608, 704, 854, 1057, 1209, 1601
ErhI	CCWWGG	8 cut(s)	103, 360, 608, 704, 854, 1057, 1209, 1601
FaqI	GGGAC	7 cut(s)	96, 517, 702, 1075, 1228, 1387, 1539
FauI	CCCGC	1 cut(s)	679
FbaI	TGATCA	2 cut(s)	559, 1459
FblI	GTMKAC	2 cut(s)	963, 1435
Fnu4HI	GCNGC	5 cut(s)	39, 827, 1163, 1166, 1265
FokI	GGATG	2 cut(s)	1553, 1618
FseI	GGCCGGCC	1 cut(s)	1344
Fsp4HI	GCNGC	5 cut(s)	39, 827, 1163, 1166, 1265
FspBI	CTAG	3 cut(s)	1514, 1707, 1819
GlaI	GCGC	1 cut(s)	1764
GluI	GCNGC	5 cut(s)	39, 827, 1163, 1166, 1265
GsaI	CCCAGC	1 cut(s)	321
GsuI	CTGGAG	2 cut(s)	467, 1767
HaeIII	GGCC	5 cut(s)	383, 613, 1232, 1340, 1344
HapII	CCGG	5 cut(s)	614, 1341, 1345, 1410, 1559
HgaI	GACGC	3 cut(s)	61, 93, 946
HhaI	GCGC	1 cut(s)	1765
Hin1I	GRCGYC	2 cut(s)	72, 957
Hin6I	GCGC	1 cut(s)	1763
HinP1I	GCGC	1 cut(s)	1763
HincII	GTYRAC	1 cut(s)	145
HindII	GTYRAC	1 cut(s)	145
HindIII	AAGCTT	1 cut(s)	1004
HinfI	GANTC	6 cut(s)	731, 745, 918, 1361, 1548, 1634
HpaII	CCGG	5 cut(s)	614, 1341, 1345, 1410, 1559
HphI	GGTGA	1 cut(s)	667
Hpy166II	GTNNAC	6 cut(s)	145, 415, 964, 1385, 1436, 1442
Hpy188I	TCNGA	9 cut(s)	177, 333, 530, 605, 730, 1400, 1580, 1621, 1799
Hpy188III	TCNNGA	8 cut(s)	120, 517, 735, 833, 1000, 1410, 1422, 1784
Hpy8I	GTNNAC	6 cut(s)	145, 415, 964, 1385, 1436, 1442
Hpy99I	CGWCG	2 cut(s)	664, 962
HpyAV	CCTTC	8 cut(s)	107, 193, 332, 445, 544, 938, 1103, 1113
HpyCH4III	ACNGT	7 cut(s)	128, 419, 471, 1023, 1103, 1271, 1575
HpyCH4IV	ACGT	2 cut(s)	511, 1438
HpyCH4V	TGCA	8 cut(s)	28, 38, 242, 415, 695, 1072, 1267, 1663
HpyF10VI	GCNNNNNNNGC	4 cut(s)	530, 692, 885, 1112
HpySE526I	ACGT	2 cut(s)	511, 1438
Hsp92I	GRCGYC	2 cut(s)	72, 957
HspAI	GCGC	1 cut(s)	1763
Kpn2I	TCCGGA	1 cut(s)	1409
KroI	GCCGGC	1 cut(s)	1340
KroNI	GCCGGC	1 cut(s)	1342
Ksp22I	TGATCA	2 cut(s)	559, 1459
LmnI	GCTCC	6 cut(s)	530, 709, 884, 895, 1159, 1804
Lsp1109I	GCAGC	4 cut(s)	50, 838, 1174, 1251
LweI	GCATC	1 cut(s)	375
MaeI	CTAG	3 cut(s)	1514, 1707, 1819
MaeII	ACGT	2 cut(s)	511, 1438
MaeIII	GTNAC	3 cut(s)	655, 859, 1097
MboII	GAAGA	5 cut(s)	848, 882, 913, 960, 1547
MfeI	CAATTG	1 cut(s)	29
MflI	RGATCY	3 cut(s)	310, 1400, 1621
MhlI	GDGCHC	2 cut(s)	417, 1117
MlyI	GAGTC	2 cut(s)	1370, 1557
MmeI	TCCRAC	3 cut(s)	28, 1289, 1576
MroI	TCCGGA	1 cut(s)	1409
MroNI	GCCGGC	1 cut(s)	1340
MroXI	GAANNNNTTC	1 cut(s)	540
MseI	TTAA	8 cut(s)	222, 227, 546, 1011, 1082, 1181, 1277, 1470
MspA1I	CMGCKG	3 cut(s)	41, 137, 1165
MspCI	CTTAAG	1 cut(s)	545
MspI	CCGG	5 cut(s)	614, 1341, 1345, 1410, 1559
MspR9I	CCNGG	6 cut(s)	446, 926, 1298, 1451, 1523, 1559
MunI	CAATTG	1 cut(s)	29
Mva1269I	GAATGC	2 cut(s)	40, 524
MvaI	CCWGG	5 cut(s)	446, 926, 1298, 1451, 1523
MvnI	CGCG	2 cut(s)	87, 153
MwoI	GCNNNNNNNGC	4 cut(s)	530, 692, 885, 1112
NaeI	GCCGGC	1 cut(s)	1342
NciI	CCSGG	1 cut(s)	1559
NcoI	CCATGG	2 cut(s)	360, 1209
NgoMIV	GCCGGC	1 cut(s)	1340
NlaIV	GGNNCC	4 cut(s)	162, 461, 1313, 1527
NmuCI	GTSAC	2 cut(s)	655, 859
NspI	RCATGY	1 cut(s)	1667
PagI	TCATGA	1 cut(s)	516
PctI	GAATGC	2 cut(s)	40, 524
PdiI	GCCGGC	1 cut(s)	1342
PdmI	GAANNNNTTC	1 cut(s)	540
PfeI	GAWTC	4 cut(s)	731, 745, 918, 1634
PfoI	TCCNGGA	3 cut(s)	444, 1296, 1557
PkrI	GCNGC	5 cut(s)	40, 828, 1164, 1167, 1266
PleI	GAGTC	2 cut(s)	1369, 1556
PmaCI	CACGTG	1 cut(s)	512
PmlI	CACGTG	1 cut(s)	512
PpsI	GAGTC	2 cut(s)	1369, 1556
Ppu21I	YACGTR	2 cut(s)	512, 1439
Psp6I	CCWGG	5 cut(s)	444, 924, 1296, 1449, 1521
PspCI	CACGTG	1 cut(s)	512
PspFI	CCCAGC	1 cut(s)	317
PspGI	CCWGG	5 cut(s)	444, 924, 1296, 1449, 1521
PspN4I	GGNNCC	4 cut(s)	162, 461, 1313, 1527
PspPI	GGNCC	3 cut(s)	132, 605, 1526
PstNI	CAGNNNCTG	1 cut(s)	1168
PsuI	RGATCY	3 cut(s)	310, 1400, 1621
PvuII	CAGCTG	1 cut(s)	41
RigI	GGCCGGCC	1 cut(s)	1344
RsaI	GTAC	5 cut(s)	973, 1386, 1443, 1748, 1774
RsaNI	GTAC	5 cut(s)	972, 1385, 1442, 1747, 1773
SaqAI	TTAA	8 cut(s)	222, 227, 546, 1011, 1082, 1181, 1277, 1470
SatI	GCNGC	5 cut(s)	39, 827, 1163, 1166, 1265
Sau96I	GGNCC	3 cut(s)	132, 605, 1526
ScaI	AGTACT	1 cut(s)	1748
SchI	GAGTC	2 cut(s)	1370, 1557
ScrFI	CCNGG	6 cut(s)	446, 926, 1298, 1451, 1523, 1559
SduI	GDGCHC	2 cut(s)	417, 1117
SfaNI	GCATC	1 cut(s)	375
SfcI	CTRYAG	1 cut(s)	883
SinI	GGWCC	3 cut(s)	132, 605, 1526
SmlI	CTYRAG	2 cut(s)	545, 1733
SmoI	CTYRAG	2 cut(s)	545, 1733
SsiI	CCGC	9 cut(s)	87, 135, 231, 635, 653, 686, 1106, 1165, 1628
SspI	AATATT	2 cut(s)	756, 1659
SspMI	CTAG	3 cut(s)	1514, 1707, 1819
StyD4I	CCNGG	6 cut(s)	444, 924, 1296, 1449, 1521, 1557
StyI	CCWWGG	8 cut(s)	103, 360, 608, 704, 854, 1057, 1209, 1601
TaaI	ACNGT	7 cut(s)	128, 419, 471, 1023, 1103, 1271, 1575
TaiI	ACGT	2 cut(s)	514, 1441
TaqI	TCGA	5 cut(s)	346, 642, 1117, 1195, 1251
TatI	WGTACW	2 cut(s)	1384, 1746
TauI	GCSGC	1 cut(s)	1168
TfiI	GAWTC	4 cut(s)	731, 745, 918, 1634
Tru1I	TTAA	8 cut(s)	222, 227, 546, 1011, 1082, 1181, 1277, 1470
Tru9I	TTAA	8 cut(s)	222, 227, 546, 1011, 1082, 1181, 1277, 1470
TscAI	CASTG	5 cut(s)	199, 422, 1266, 1274, 1375
TseFI	GTSAC	2 cut(s)	655, 859
TseI	GCWGC	4 cut(s)	38, 826, 1162, 1264
Tsp45I	GTSAC	2 cut(s)	655, 859
TspDTI	ATGAA	4 cut(s)	660, 824, 1149, 1715
TspGWI	ACGGA	4 cut(s)	225, 761, 878, 1746
TspRI	CASTG	5 cut(s)	199, 422, 1266, 1274, 1375
Vha464I	CTTAAG	1 cut(s)	545
VneI	GTGCAC	1 cut(s)	413
VpaK11BI	GGWCC	3 cut(s)	132, 605, 1526
XagI	CCTNNNNNAGG	1 cut(s)	449
XapI	RAATTY	7 cut(s)	475, 540, 579, 1153, 1290, 1393, 1417
XceI	RCATGY	1 cut(s)	1667
XmiI	GTMKAC	2 cut(s)	963, 1435
XmnI	GAANNNNTTC	1 cut(s)	540
XspI	CTAG	3 cut(s)	1514, 1707, 1819
ZrmI	AGTACT	1 cut(s)	1748

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.