MD10G1130000.v1.1

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
Physical Location & Seq
Reverse (-)
21026534 .. 21033410
6877 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1130000.v1.1.491

Sequence Viewer

Length: 1299 bp
ATGAGTGCAGCAGATACTATGAATACAGATCCTCCGGGTAAAGATGCTGCCCAAAGTTCAAACATATCTACCAGACAAAGTATACATCCCCCTCCAGCGTTTGGCTCATCTCCTAACCTCGAAGCCCTTGCACTGGAGGCAAATAAATCTGAAGATCATGATGCTTTGACTTCCTTGCTTGCGGAGATTGGGCTGAACATCCAAGAAGCACATGCTTTTTCCACATTAGATGGTTACTCCTTGGATGTCTTTGTTGTTGATGGATGGCGTTACGAGGAGACAGATAAGCTTAAGATCGCAATACAAAAGGAAGTTTTAAAGATTGAGAGGCCGTGGCCGCCAACTCATCGATCATCATCTTTTGGTAGCGAGCATGATCAAGTAGTGATCAAAACTGAACCTGATCATCTGGAAATACCTAATGATGGGACTGATGTATGGGAACTTGATCCTAGACAATTGAAGTTTGGGAATAAAGTTGCATCTGGGTCCTGTGGAGATTTATATAAAGGTACATATTGTACTCAAGAAGTTGCCATTAAAGTCCTCAAGCCCGAGTGTGTGAATCCAGATATGCTGAAAGATTTTGCCCAGGAAGTCTACATTATGAGGAAAGTTCGACACAAGAATGTTGTACAATTCATTGGTGCGTGTACCAAGCATCCAAGCTTATGCATTGTAACAGAATATATGTCCGGTGGAAGTGTGTATGACTACTTGCATAAACAAAAGGGAGTTTTTAAGCTTCCATCCTTGCTCAAGGTCGCAATTGATGTTTCCAAGGGAATGACCTACTTGCATCAAAATAACATAATCCACAGGGATTTAAAAGCCGCCAATCTCTTGATGGATGAAAATGAAGTTGTTAAGGTTGCTGATTTCGGGGTTGCTAGAGTAAATTCTCATTCTGGAGTAATGACATCAGAAACTGGGACTTATAGGTGGATGGCTCCAGAGGTCATAGAACACAAGCCATATGATCACAAGGCGGATGTTTTTAGCTTTGGACTTGTGTTATGGGAGTTACTGACTGGAAAGCTTCCATATGAACACTTGACCCCATTACAAGCAGCCGTCGGAGTTGCCCAAAAGGGCTTACGGCCGACCATCCCAAAGAATACTCCTCCCAAGCTTGCCGAGCTGCTCGAAAAATGCTGGCAGCAAGATCCAGCAACAAGACCTGATTTCTCTGAAATCATAGAGAATCTGCAGACACTAGCCGAAGAGGTTGGTGATGGAGTGGAACGACACAAATCATCGGGAGGATTTCTGTCAGTCCTGAGACGGGGTCACCATTAA

Protein Analysis

433

Amino Acids

48.04

Weight (kDa)

5.84

Isoelectric Point (pI)

46.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 154 - 403 2.6e-75 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 157 - 401 4.9e-60 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 101
AccI GTMKAC 2 cut(s) 82, 600
AciI CCGC 4 cut(s) 182, 338, 834, 989
AclWI GGATC 3 cut(s) 23, 443, 1160
AcoI YGGCCR 2 cut(s) 335, 1100
AcsI RAATTY 1 cut(s) 898
AcuI CTGAAG 1 cut(s) 171
AfaI GTAC 4 cut(s) 514, 523, 636, 655
AfiI CCNNNNNNNGG 4 cut(s) 101, 133, 425, 1285
AflII CTTAAG 1 cut(s) 290
AgsI TTSAA 2 cut(s) 60, 463
AjnI CCWGG 1 cut(s) 591
AluBI AGCT 7 cut(s) 289, 669, 745, 1002, 1039, 1132, 1141
AluI AGCT 7 cut(s) 289, 669, 745, 1002, 1039, 1132, 1141
Alw26I GTCTC 2 cut(s) 272, 1276
AlwI GGATC 3 cut(s) 23, 443, 1160
AlwNI CAGNNNCTG 1 cut(s) 929
Ama87I CYCGRG 1 cut(s) 554
AoxI GGCC 3 cut(s) 329, 335, 1100
ApeKI GCWGC 5 cut(s) 8, 47, 1070, 1141, 1159
ApoI RAATTY 1 cut(s) 898
AspS9I GGNCC 1 cut(s) 489
AsuC2I CCSGG 1 cut(s) 36
AsuHPI GGTGA 2 cut(s) 1244, 1283
AvaI CYCGRG 1 cut(s) 554
AvaII GGWCC 1 cut(s) 489
BbvI GCAGC 5 cut(s) 20, 34, 1082, 1128, 1171
BccI CCATC 9 cut(s) 224, 254, 258, 419, 757, 841, 940, 1115, 1229
BceAI ACGGC 3 cut(s) 316, 1058, 1115
BcgI CGANNNNNNTGC 2 cut(s) 110, 144
BciT130I CCWGG 1 cut(s) 593
BclI TGATCA 4 cut(s) 376, 387, 403, 979
BcnI CCSGG 1 cut(s) 36
BcoDI GTCTC 2 cut(s) 272, 1276
BfaI CTAG 3 cut(s) 453, 891, 1217
BfmI CTRYAG 1 cut(s) 1208
BfrI CTTAAG 1 cut(s) 290
BisI GCNGC 7 cut(s) 9, 48, 338, 834, 1071, 1142, 1160
BlsI GCNGC 7 cut(s) 10, 49, 339, 835, 1072, 1143, 1161
Bme1390I CCNGG 2 cut(s) 36, 593
Bme18I GGWCC 1 cut(s) 489
BmeT110I CYCGRG 1 cut(s) 554
BmgT120I GGNCC 1 cut(s) 489
BmiI GGNNCC 2 cut(s) 490, 951
BmrFI CCNGG 2 cut(s) 36, 593
BmrI ACTGGG 1 cut(s) 939
BmsI GCATC 5 cut(s) 34, 151, 491, 670, 808
BmuI ACTGGG 1 cut(s) 939
BpmI CTGGAG 4 cut(s) 78, 155, 930, 936
BpuEI CTTGAG 3 cut(s) 510, 533, 743
BpuMI CCSGG 1 cut(s) 36
Bsa29I ATCGAT 1 cut(s) 349
BsaBI GATNNNNATC 1 cut(s) 355
BsaJI CCNNGG 4 cut(s) 240, 332, 591, 780
BsaWI WCCGGW 1 cut(s) 695
BsaXI ACNNNNNCTCC 2 cut(s) 16, 46
Bsc4I CCNNNNNNNGG 4 cut(s) 101, 133, 425, 1285
Bse1I ACTGG 3 cut(s) 138, 934, 1036
Bse8I GATNNNNATC 1 cut(s) 355
BseBI CCWGG 1 cut(s) 593
BseCI ATCGAT 1 cut(s) 349
BseDI CCNNGG 4 cut(s) 240, 332, 591, 780
BseJI GATNNNNATC 1 cut(s) 355
BseLI CCNNNNNNNGG 4 cut(s) 101, 133, 425, 1285
BseMII CTCAG 1 cut(s) 1271
BseNI ACTGG 3 cut(s) 138, 934, 1036
BseRI GAGGAG 2 cut(s) 290, 1113
BseX3I CGGCCG 1 cut(s) 1100
BseXI GCAGC 5 cut(s) 20, 34, 1082, 1128, 1171
BsgI GTGCAG 1 cut(s) 27
Bsh1285I CGRYCG 1 cut(s) 1103
BshFI GGCC 3 cut(s) 331, 337, 1102
BshVI ATCGAT 1 cut(s) 349
BsiEI CGRYCG 1 cut(s) 1103
BsiHKCI CYCGRG 1 cut(s) 554
BsiSI CCGG 2 cut(s) 35, 696
BslFI GGGAC 2 cut(s) 442, 946
BslI CCNNNNNNNGG 4 cut(s) 101, 133, 425, 1285
BsmAI GTCTC 2 cut(s) 272, 1276
BsmBI CGTCTC 1 cut(s) 1276
BsmFI GGGAC 2 cut(s) 442, 946
BsnI GGCC 3 cut(s) 331, 337, 1102
BsoBI CYCGRG 1 cut(s) 554
Bsp1407I TGTACA 1 cut(s) 634
BspACI CCGC 4 cut(s) 182, 338, 834, 989
BspANI GGCC 3 cut(s) 331, 337, 1102
BspCNI CTCAG 1 cut(s) 1272
BspDI ATCGAT 1 cut(s) 349
BspHI TCATGA 1 cut(s) 157
BspLI GGNNCC 2 cut(s) 490, 951
BspMAI CTGCAG 1 cut(s) 1212
BspPI GGATC 3 cut(s) 23, 443, 1160
BspTI CTTAAG 1 cut(s) 290
BsrGI TGTACA 1 cut(s) 634
BsrI ACTGG 3 cut(s) 138, 934, 1036
BssECI CCNNGG 4 cut(s) 240, 332, 591, 780
BssNAI GTATAC 1 cut(s) 83
BssT1I CCWWGG 2 cut(s) 240, 780
Bst1107I GTATAC 1 cut(s) 83
Bst2UI CCWGG 1 cut(s) 593
Bst6I CTCTTC 1 cut(s) 1218
BstAFI CTTAAG 1 cut(s) 290
BstAUI TGTACA 1 cut(s) 634
BstC8I GCNNGC 4 cut(s) 180, 371, 1134, 1157
BstDEI CTNAG 1 cut(s) 1280
BstDSI CCRYGG 1 cut(s) 332
BstEII GGTNACC 1 cut(s) 1289
BstMAI GTCTC 2 cut(s) 272, 1276
BstMCI CGRYCG 1 cut(s) 1103
BstMWI GCNNNNNNNGC 3 cut(s) 137, 337, 1138
BstNI CCWGG 1 cut(s) 593
BstNSI RCATGY 1 cut(s) 215
BstPI GGTNACC 1 cut(s) 1289
BstSCI CCNGG 2 cut(s) 34, 591
BstSFI CTRYAG 1 cut(s) 1208
BstV1I GCAGC 5 cut(s) 20, 34, 1082, 1128, 1171
BstX2I RGATCY 2 cut(s) 28, 1165
BstYI RGATCY 2 cut(s) 28, 1165
BstZ17I GTATAC 1 cut(s) 83
BstZI CGGCCG 1 cut(s) 1100
Bsu15I ATCGAT 1 cut(s) 349
BsuRI GGCC 3 cut(s) 331, 337, 1102
BsuTUI ATCGAT 1 cut(s) 349
BtgI CCRYGG 1 cut(s) 332
BtsIMutI CAGTG 1 cut(s) 131
Cac8I GCNNGC 4 cut(s) 180, 371, 1134, 1157
CaiI CAGNNNCTG 1 cut(s) 929
CciI TCATGA 1 cut(s) 157
Cfr13I GGNCC 1 cut(s) 489
ClaI ATCGAT 1 cut(s) 349
Csp6I GTAC 4 cut(s) 513, 522, 635, 654
CviAII CATG 3 cut(s) 158, 212, 374
CviQI GTAC 4 cut(s) 513, 522, 635, 654
DdeI CTNAG 1 cut(s) 1280
DraI TTTAAA 2 cut(s) 318, 828
EaeI YGGCCR 2 cut(s) 335, 1100
EagI CGGCCG 1 cut(s) 1100
Eam1104I CTCTTC 1 cut(s) 1218
EarI CTCTTC 1 cut(s) 1218
EciI GGCGGA 1 cut(s) 1004
EclXI CGGCCG 1 cut(s) 1100
Eco130I CCWWGG 2 cut(s) 240, 780
Eco47I GGWCC 1 cut(s) 489
Eco52I CGGCCG 1 cut(s) 1100
Eco57I CTGAAG 1 cut(s) 171
Eco88I CYCGRG 1 cut(s) 554
Eco91I GGTNACC 1 cut(s) 1289
EcoO109I RGGNCCY 1 cut(s) 489
EcoO65I GGTNACC 1 cut(s) 1289
EcoRII CCWGG 1 cut(s) 591
EcoT14I CCWWGG 2 cut(s) 240, 780
EcoT22I ATGCAT 1 cut(s) 677
ErhI CCWWGG 2 cut(s) 240, 780
Esp3I CGTCTC 1 cut(s) 1276
FaeI CATG 3 cut(s) 161, 215, 377
FaqI GGGAC 2 cut(s) 442, 946
FatI CATG 3 cut(s) 157, 211, 373
FauNDI CATATG 2 cut(s) 976, 1045
FbaI TGATCA 4 cut(s) 376, 387, 403, 979
FblI GTMKAC 2 cut(s) 82, 600
Fnu4HI GCNGC 7 cut(s) 9, 48, 338, 834, 1071, 1142, 1160
Fsp4HI GCNGC 7 cut(s) 9, 48, 338, 834, 1071, 1142, 1160
FspBI CTAG 3 cut(s) 453, 891, 1217
GluI GCNGC 7 cut(s) 9, 48, 338, 834, 1071, 1142, 1160
GsuI CTGGAG 4 cut(s) 78, 155, 930, 936
HaeIII GGCC 3 cut(s) 331, 337, 1102
HapII CCGG 2 cut(s) 35, 696
Hin1II CATG 3 cut(s) 161, 215, 377
HindIII AAGCTT 5 cut(s) 287, 667, 743, 1037, 1130
HinfI GANTC 2 cut(s) 565, 1204
HpaII CCGG 2 cut(s) 35, 696
HphI GGTGA 2 cut(s) 1244, 1283
Hpy166II GTNNAC 3 cut(s) 83, 601, 654
Hpy188I TCNGA 4 cut(s) 151, 925, 1079, 1192
Hpy188III TCNNGA 9 cut(s) 158, 410, 527, 569, 844, 909, 953, 1260, 1279
Hpy8I GTNNAC 3 cut(s) 83, 601, 654
Hpy99I CGWCG 1 cut(s) 1079
HpyCH4V TGCA 7 cut(s) 8, 131, 482, 675, 721, 799, 1210
HpyF10VI GCNNNNNNNGC 3 cut(s) 137, 337, 1138
HpyF3I CTNAG 1 cut(s) 1280
Hsp92II CATG 3 cut(s) 161, 215, 377
Ksp22I TGATCA 4 cut(s) 376, 387, 403, 979
LmnI GCTCC 1 cut(s) 955
Lsp1109I GCAGC 5 cut(s) 20, 34, 1082, 1128, 1171
LweI GCATC 5 cut(s) 34, 151, 491, 670, 808
MaeI CTAG 3 cut(s) 453, 891, 1217
MaeIII GTNAC 5 cut(s) 233, 269, 679, 1023, 1289
MboII GAAGA 2 cut(s) 164, 1235
MfeI CAATTG 2 cut(s) 458, 768
MflI RGATCY 2 cut(s) 28, 1165
MluCI AATT 4 cut(s) 458, 638, 768, 898
MmeI TCCRAC 1 cut(s) 1057
Mph1103I ATGCAT 1 cut(s) 677
MseI TTAA 7 cut(s) 291, 317, 540, 741, 827, 867, 1297
MslI CAYNNNNRTG 1 cut(s) 627
MspCI CTTAAG 1 cut(s) 290
MspI CCGG 2 cut(s) 35, 696
MspR9I CCNGG 2 cut(s) 36, 593
MunI CAATTG 2 cut(s) 458, 768
MvaI CCWGG 1 cut(s) 593
MwoI GCNNNNNNNGC 3 cut(s) 137, 337, 1138
NciI CCSGG 1 cut(s) 36
NdeI CATATG 2 cut(s) 976, 1045
NlaIII CATG 3 cut(s) 161, 215, 377
NlaIV GGNNCC 2 cut(s) 490, 951
NmeAIII GCCGAG 1 cut(s) 1162
NmuCI GTSAC 1 cut(s) 1289
NsiI ATGCAT 1 cut(s) 677
NspI RCATGY 1 cut(s) 215
PagI TCATGA 1 cut(s) 157
PfeI GAWTC 2 cut(s) 565, 1204
PflFI GACNNNGTC 1 cut(s) 1287
PflMI CCANNNNNTGG 1 cut(s) 101
PkrI GCNGC 7 cut(s) 10, 49, 339, 835, 1072, 1143, 1161
PpuMI RGGWCCY 1 cut(s) 489
Psp5II RGGWCCY 1 cut(s) 489
Psp6I CCWGG 1 cut(s) 591
PspEI GGTNACC 1 cut(s) 1289
PspGI CCWGG 1 cut(s) 591
PspN4I GGNNCC 2 cut(s) 490, 951
PspPI GGNCC 1 cut(s) 489
PspPPI RGGWCCY 1 cut(s) 489
PstI CTGCAG 1 cut(s) 1212
PstNI CAGNNNCTG 1 cut(s) 929
PsuI RGATCY 2 cut(s) 28, 1165
PsyI GACNNNGTC 1 cut(s) 1287
RsaI GTAC 4 cut(s) 514, 523, 636, 655
RsaNI GTAC 4 cut(s) 513, 522, 635, 654
RseI CAYNNNNRTG 1 cut(s) 627
SaqAI TTAA 7 cut(s) 291, 317, 540, 741, 827, 867, 1297
SatI GCNGC 7 cut(s) 9, 48, 338, 834, 1071, 1142, 1160
Sau96I GGNCC 1 cut(s) 489
ScrFI CCNGG 2 cut(s) 36, 593
SfaNI GCATC 5 cut(s) 34, 151, 491, 670, 808
SfcI CTRYAG 1 cut(s) 1208
SinI GGWCC 1 cut(s) 489
SmiMI CAYNNNNRTG 1 cut(s) 627
SmlI CTYRAG 4 cut(s) 290, 525, 548, 758
SmoI CTYRAG 4 cut(s) 290, 525, 548, 758
Sse9I AATT 4 cut(s) 458, 638, 768, 898
SsiI CCGC 4 cut(s) 182, 338, 834, 989
SspMI CTAG 3 cut(s) 453, 891, 1217
StyD4I CCNGG 2 cut(s) 34, 591
StyI CCWWGG 2 cut(s) 240, 780
TaqI TCGA 4 cut(s) 120, 349, 619, 1146
TasI AATT 4 cut(s) 458, 638, 768, 898
TatI WGTACW 2 cut(s) 521, 634
TauI GCSGC 2 cut(s) 340, 836
TfiI GAWTC 2 cut(s) 565, 1204
Tru1I TTAA 7 cut(s) 291, 317, 540, 741, 827, 867, 1297
Tru9I TTAA 7 cut(s) 291, 317, 540, 741, 827, 867, 1297
TscAI CASTG 1 cut(s) 138
TseFI GTSAC 1 cut(s) 1289
TseI GCWGC 5 cut(s) 8, 47, 1070, 1141, 1159
Tsp45I GTSAC 1 cut(s) 1289
TspDTI ATGAA 5 cut(s) 35, 631, 867, 873, 1062
TspRI CASTG 1 cut(s) 138
Tth111I GACNNNGTC 1 cut(s) 1287
Van91I CCANNNNNTGG 1 cut(s) 101
Vha464I CTTAAG 1 cut(s) 290
VpaK11BI GGWCC 1 cut(s) 489
XapI RAATTY 1 cut(s) 898
XceI RCATGY 1 cut(s) 215
XcmI CCANNNNNNNNNTGG 1 cut(s) 844
XmiI GTMKAC 2 cut(s) 82, 600
XspI CTAG 3 cut(s) 453, 891, 1217
Zsp2I ATGCAT 1 cut(s) 677
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.